ISMARA results: Arid5b

Motif ID: Arid5b

Z-value: 0.238

Transcription factors associated with Arid5b:

Gene Symbol	Entrez ID	Gene Name
Arid5b	ENSMUSG00000019947.9	Arid5b

Activity-expression correlation:

Gene Symbol	Promoter	Pearson corr. coef.	P-value	Plot
Arid5b	mm10_v2_chr10_-_68278713_68278735	-0.02	8.6e-01	Click!

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Showing 1 to 20 of 65 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr5_+_115908644	0.630	ENSMUST00000141101.1	Cit	citron
chr12_-_91746020	0.544	ENSMUST00000166967.1	Ston2	stonin 2
chr4_+_105157339	0.542	ENSMUST00000064139.7	Ppap2b	phosphatidic acid phosphatase type 2B
chr3_+_34649987	0.505	ENSMUST00000099151.2	Sox2	SRY-box containing gene 2
chr12_-_10900296	0.457	ENSMUST00000085735.2	Pgk1-rs7	phosphoglycerate kinase-1, related sequence-7
chr10_-_6980376	0.441	ENSMUST00000105617.1	Ipcef1	interaction protein for cytohesin exchange factors 1
chr14_-_47394253	0.435	ENSMUST00000177822.1	Dlgap5	discs, large (Drosophila) homolog-associated protein 5
chr3_-_95882031	0.380	ENSMUST00000161994.1	Gm129	predicted gene 129
chr4_+_132638987	0.369	ENSMUST00000135299.1 ENSMUST00000081726.6 ENSMUST00000180250.1 ENSMUST00000020197.7 ENSMUST00000079157.4	Eya3	eyes absent 3 homolog (Drosophila)
chr2_+_25180737	0.347	ENSMUST00000104999.2	Nrarp	Notch-regulated ankyrin repeat protein
chr9_+_87022014	0.336	ENSMUST00000168529.2 ENSMUST00000174724.1 ENSMUST00000173126.1	Cyb5r4	cytochrome b5 reductase 4
chr15_-_13173607	0.321	ENSMUST00000036439.4	Cdh6	cadherin 6
chr1_+_180568913	0.315	ENSMUST00000027777.6	Parp1	poly (ADP-ribose) polymerase family, member 1
chr1_+_88227005	0.315	ENSMUST00000061013.6 ENSMUST00000113130.1	Mroh2a	maestro heat-like repeat family member 2A
chr13_+_23533869	0.315	ENSMUST00000073261.2	Hist1h2af	histone cluster 1, H2af
chr9_+_21196705	0.311	ENSMUST00000003395.9	Pde4a	phosphodiesterase 4A, cAMP specific
chr3_-_19264959	0.297	ENSMUST00000121951.1	Pde7a	phosphodiesterase 7A
chr3_-_95882193	0.296	ENSMUST00000159863.1 ENSMUST00000159739.1 ENSMUST00000036418.3	Gm129	predicted gene 129
chr6_+_120666388	0.284	ENSMUST00000112686.1	Cecr2	cat eye syndrome chromosome region, candidate 2
chr15_-_55548164	0.273	ENSMUST00000165356.1	Mrpl13	mitochondrial ribosomal protein L13

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Showing 1 to 20 of 21 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	GO:0050774	negative regulation of dendrite morphogenesis(GO:0050774)
0.1	0.5	GO:0071699	olfactory placode formation(GO:0030910) olfactory placode development(GO:0071698) olfactory placode morphogenesis(GO:0071699)
0.0	0.4	GO:0016576	histone dephosphorylation(GO:0016576)
0.1	0.3	GO:1904760	myofibroblast differentiation(GO:0036446) regulation of myofibroblast differentiation(GO:1904760)
0.0	0.3	GO:0001842	neural fold formation(GO:0001842)
0.0	0.3	GO:0014807	regulation of somitogenesis(GO:0014807)
0.1	0.2	GO:0046101	hypoxanthine metabolic process(GO:0046100) hypoxanthine biosynthetic process(GO:0046101)
0.1	0.2	GO:0006657	CDP-choline pathway(GO:0006657)
0.1	0.2	GO:0006014	D-ribose metabolic process(GO:0006014)
0.1	0.2	GO:0006597	spermine biosynthetic process(GO:0006597)
0.0	0.2	GO:0033030	negative regulation of neutrophil apoptotic process(GO:0033030)
0.0	0.2	GO:0002051	osteoblast fate commitment(GO:0002051)
0.0	0.2	GO:0005513	detection of calcium ion(GO:0005513)
0.0	0.2	GO:0045653	negative regulation of megakaryocyte differentiation(GO:0045653)
0.0	0.2	GO:0006607	NLS-bearing protein import into nucleus(GO:0006607)
0.0	0.1	GO:0072382	minus-end-directed vesicle transport along microtubule(GO:0072382)
0.0	0.1	GO:0060672	epithelial cell differentiation involved in embryonic placenta development(GO:0060671) epithelial cell morphogenesis involved in placental branching(GO:0060672)
0.0	0.1	GO:0050787	glycolate metabolic process(GO:0009441) enzyme active site formation via L-cysteine sulfinic acid(GO:0018323) primary alcohol biosynthetic process(GO:0034309) cellular response to glyoxal(GO:0036471) glycolate biosynthetic process(GO:0046295) detoxification of mercury ion(GO:0050787) negative regulation of TRAIL-activated apoptotic signaling pathway(GO:1903122) regulation of pyrroline-5-carboxylate reductase activity(GO:1903167) positive regulation of pyrroline-5-carboxylate reductase activity(GO:1903168) regulation of tyrosine 3-monooxygenase activity(GO:1903176) positive regulation of tyrosine 3-monooxygenase activity(GO:1903178) L-dopa metabolic process(GO:1903184) L-dopa biosynthetic process(GO:1903185) glyoxal metabolic process(GO:1903189) regulation of L-dopa biosynthetic process(GO:1903195) positive regulation of L-dopa biosynthetic process(GO:1903197) regulation of L-dopa decarboxylase activity(GO:1903198) positive regulation of L-dopa decarboxylase activity(GO:1903200) positive regulation of cellular amino acid biosynthetic process(GO:2000284)
0.0	0.1	GO:0071707	immunoglobulin heavy chain V-D-J recombination(GO:0071707)
0.0	0.1	GO:2000642	negative regulation of early endosome to late endosome transport(GO:2000642)

Gene overrepresentation in cellular_component category:

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Showing 1 to 7 of 7 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	GO:0097610	cleavage furrow(GO:0032154) cell surface furrow(GO:0097610)
0.0	0.4	GO:0031616	spindle pole centrosome(GO:0031616)
0.1	0.3	GO:0090537	CERF complex(GO:0090537)
0.1	0.2	GO:0002189	ribose phosphate diphosphokinase complex(GO:0002189)
0.0	0.2	GO:0042587	glycogen granule(GO:0042587)
0.0	0.2	GO:0031045	dense core granule(GO:0031045)
0.0	0.1	GO:0002177	manchette(GO:0002177)

Gene overrepresentation in molecular_function category:

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Showing 1 to 14 of 14 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	GO:0035198	miRNA binding(GO:0035198)
0.0	0.5	GO:0004115	3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115)
0.1	0.3	GO:0003910	DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0	0.3	GO:0004128	cytochrome-b5 reductase activity, acting on NAD(P)H(GO:0004128)
0.1	0.2	GO:0047179	platelet-activating factor acetyltransferase activity(GO:0047179)
0.1	0.2	GO:0004749	ribose phosphate diphosphokinase activity(GO:0004749)
0.0	0.2	GO:0030348	syntaxin-3 binding(GO:0030348)
0.0	0.2	GO:0004105	choline-phosphate cytidylyltransferase activity(GO:0004105)
0.0	0.2	GO:0008440	inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440)
0.0	0.2	GO:0017151	DEAD/H-box RNA helicase binding(GO:0017151)
0.0	0.1	GO:0019966	interleukin-1 binding(GO:0019966)
0.0	0.1	GO:0036470	tyrosine 3-monooxygenase activator activity(GO:0036470) L-dopa decarboxylase activator activity(GO:0036478)
0.0	0.1	GO:0001161	intronic transcription regulatory region sequence-specific DNA binding(GO:0001161)
0.0	0.1	GO:0008569	ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569)

Gene overrepresentation in C2:CP category:

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Showing 1 to 6 of 6 entries

Total log-likelihood	Term	Description
0.6	PID_RHOA_PATHWAY	RhoA signaling pathway
0.4	SA_PTEN_PATHWAY	PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate.
0.4	PID_AURORA_A_PATHWAY	Aurora A signaling
0.3	SA_CASPASE_CASCADE	Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.2	ST_PAC1_RECEPTOR_PATHWAY	PAC1 Receptor Pathway
0.2	PID_ALK2_PATHWAY	ALK2 signaling events

Gene overrepresentation in C2:CP:REACTOME category:

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Showing 1 to 2 of 2 entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS	Genes involved in Sphingolipid de novo biosynthesis
0.0	0.2	REACTOME_ACETYLCHOLINE_NEUROTRANSMITTER_RELEASE_CYCLE	Genes involved in Acetylcholine Neurotransmitter Release Cycle