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Top targets:

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr1_+_139454747	13.642	ENSMUST00000053364.8 ENSMUST00000097554.3	Aspm	asp (abnormal spindle)-like, microcephaly associated (Drosophila)
chrX_-_142966709	9.221	ENSMUST00000041317.2	Ammecr1	Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
chr9_+_98422961	8.436	ENSMUST00000052068.9	Rbp1	retinol binding protein 1, cellular
chr15_-_82244716	6.904	ENSMUST00000089155.4 ENSMUST00000089157.3	Cenpm	centromere protein M
chr18_+_56432116	6.672	ENSMUST00000070166.5	Gramd3	GRAM domain containing 3
chr15_-_75894474	6.244	ENSMUST00000023237.6	Naprt1	nicotinate phosphoribosyltransferase domain containing 1
chr5_+_140607334	6.200	ENSMUST00000031555.1	Lfng	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr7_-_80115294	5.275	ENSMUST00000107384.3	Idh2	isocitrate dehydrogenase 2 (NADP+), mitochondrial
chr15_+_98571004	4.935	ENSMUST00000023728.6	4930415O20Rik	RIKEN cDNA 4930415O20 gene
chr5_+_139423151	4.608	ENSMUST00000066211.4	Gper1	G protein-coupled estrogen receptor 1
chr2_+_106693185	3.958	ENSMUST00000111063.1	Mpped2	metallophosphoesterase domain containing 2
chr3_-_85722474	3.516	ENSMUST00000119077.1	Fam160a1	family with sequence similarity 160, member A1
chr10_-_128180265	3.448	ENSMUST00000099139.1	Rbms2	RNA binding motif, single stranded interacting protein 2
chr9_+_65141154	3.315	ENSMUST00000034961.4	Igdcc3	immunoglobulin superfamily, DCC subclass, member 3
chr8_-_4275886	2.849	ENSMUST00000003029.7	Timm44	translocase of inner mitochondrial membrane 44
chr3_+_130068390	2.843	ENSMUST00000076703.6	Gm9396	predicted gene 9396
chr1_+_136467958	2.379	ENSMUST00000047817.6	Kif14	kinesin family member 14
chrX_+_169685191	2.278	ENSMUST00000112104.1 ENSMUST00000112107.1	Mid1	midline 1
chr9_+_72958785	2.133	ENSMUST00000098567.2 ENSMUST00000034734.8	Dyx1c1	dyslexia susceptibility 1 candidate 1 homolog (human)
chr3_-_37724321	2.105	ENSMUST00000108105.1 ENSMUST00000079755.4 ENSMUST00000099128.1	Gm5148	predicted gene 5148
chr3_+_94398517	2.022	ENSMUST00000050975.3	Lingo4	leucine rich repeat and Ig domain containing 4
chr13_+_104229366	2.003	ENSMUST00000022227.6	Cenpk	centromere protein K
chr4_-_32950813	1.774	ENSMUST00000084750.1 ENSMUST00000084748.2	Ankrd6	ankyrin repeat domain 6
chr14_+_57798182	1.664	ENSMUST00000111269.1	Sap18	Sin3-associated polypeptide 18
chr10_+_24595623	1.638	ENSMUST00000176228.1 ENSMUST00000129142.1	Ctgf	connective tissue growth factor
chr3_+_88207308	1.625	ENSMUST00000180582.1	Gm3764	predicted gene 3764
chr10_+_100488289	1.484	ENSMUST00000164751.1	Cep290	centrosomal protein 290
chr9_+_104002546	1.434	ENSMUST00000035167.8 ENSMUST00000117054.1	Nphp3	nephronophthisis 3 (adolescent)
chr7_-_126676357	1.428	ENSMUST00000106371.1 ENSMUST00000106372.3 ENSMUST00000155419.1	Sult1a1	sulfotransferase family 1A, phenol-preferring, member 1
chr13_+_94083490	1.281	ENSMUST00000156071.1	Lhfpl2	lipoma HMGIC fusion partner-like 2
chr7_+_30232310	1.242	ENSMUST00000108193.1 ENSMUST00000108192.1	Polr2i	polymerase (RNA) II (DNA directed) polypeptide I
chr1_-_118982551	1.241	ENSMUST00000159678.1	Gli2	GLI-Kruppel family member GLI2
chr17_+_35241838	1.192	ENSMUST00000173731.1	Ddx39b	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
chr7_-_126676428	1.185	ENSMUST00000106373.1	Sult1a1	sulfotransferase family 1A, phenol-preferring, member 1
chr8_+_57455898	1.185	ENSMUST00000034023.3	Scrg1	scrapie responsive gene 1
chr6_+_38534823	1.008	ENSMUST00000019833.4	1110001J03Rik	RIKEN cDNA 1110001J03 gene
chr2_+_131491764	0.963	ENSMUST00000028806.5 ENSMUST00000110179.2 ENSMUST00000110189.2 ENSMUST00000110182.2 ENSMUST00000110183.2 ENSMUST00000110186.2 ENSMUST00000110188.1	Smox	spermine oxidase
chr17_+_35241746	0.946	ENSMUST00000068056.5 ENSMUST00000174757.1	Ddx39b	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
chr7_-_141168671	0.919	ENSMUST00000106033.3	Rnh1	ribonuclease/angiogenin inhibitor 1
chr8_+_69832633	0.873	ENSMUST00000131637.2 ENSMUST00000081503.6	Pbx4	pre B cell leukemia homeobox 4
chr4_-_43030440	0.806	ENSMUST00000135660.1	Stoml2	stomatin (Epb7.2)-like 2
chr8_-_106573461	0.787	ENSMUST00000073722.5	Gm10073	predicted pseudogene 10073
chr2_-_13271419	0.738	ENSMUST00000028059.2	Rsu1	Ras suppressor protein 1
chr7_+_30231884	0.715	ENSMUST00000019882.9	Polr2i	polymerase (RNA) II (DNA directed) polypeptide I
chr11_-_69695521	0.704	ENSMUST00000181261.1	Tnfsf12	tumor necrosis factor (ligand) superfamily, member 12
chr2_-_13271268	0.701	ENSMUST00000137670.1 ENSMUST00000114791.2	Rsu1	Ras suppressor protein 1
chr4_+_133176336	0.664	ENSMUST00000105912.1	Wasf2	WAS protein family, member 2
chr12_+_84773262	0.634	ENSMUST00000021667.5	Isca2	iron-sulfur cluster assembly 2 homolog (S. cerevisiae)
chr3_+_146220955	0.605	ENSMUST00000039164.2	Lpar3	lysophosphatidic acid receptor 3
chr7_-_101903783	0.539	ENSMUST00000106969.1	Tomt	transmembrane O-methyltransferase
chr15_-_76206309	0.489	ENSMUST00000073418.6 ENSMUST00000171634.1 ENSMUST00000076442.5	Plec	plectin
chr8_+_84831522	0.473	ENSMUST00000036734.5	Gadd45gip1	growth arrest and DNA-damage-inducible, gamma interacting protein 1
chr4_+_11758147	0.432	ENSMUST00000029871.5 ENSMUST00000108303.1	Cdh17	cadherin 17
chr19_-_55315980	0.425	ENSMUST00000076891.5	Zdhhc6	zinc finger, DHHC domain containing 6
chr17_-_56716788	0.386	ENSMUST00000067931.5	Vmac	vimentin-type intermediate filament associated coiled-coil protein
chr17_-_53539411	0.363	ENSMUST00000056198.3	Pp2d1	protein phosphatase 2C-like domain containing 1
chr11_-_99230998	0.362	ENSMUST00000103133.3	Smarce1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
chrX_-_74373218	0.352	ENSMUST00000178691.1 ENSMUST00000114146.1	Ubl4 Slc10a3	ubiquitin-like 4 solute carrier family 10 (sodium/bile acid cotransporter family), member 3
chr5_-_106926245	0.285	ENSMUST00000117588.1	Hfm1	HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
chr19_-_23075853	0.266	ENSMUST00000181623.1	C330002G04Rik	RIKEN cDNA C330002G04 gene
chr5_+_21543525	0.243	ENSMUST00000035651.4	Lrrc17	leucine rich repeat containing 17
chrX_-_74373260	0.243	ENSMUST00000073067.4 ENSMUST00000037967.5	Slc10a3	solute carrier family 10 (sodium/bile acid cotransporter family), member 3
chr14_+_58893465	0.237	ENSMUST00000079960.1	Rpl13-ps3	ribosomal protein L13, pseudogene 3
chr14_+_57798156	0.208	ENSMUST00000128764.1	Sap18	Sin3-associated polypeptide 18
chr7_+_43690418	0.202	ENSMUST00000056329.6	Klk14	kallikrein related-peptidase 14
chr12_+_30584429	0.183	ENSMUST00000057151.8	Tmem18	transmembrane protein 18
chr17_+_40811089	0.178	ENSMUST00000024721.7	Rhag	Rhesus blood group-associated A glycoprotein
chr16_+_11203375	0.167	ENSMUST00000181526.1	2610020C07Rik	RIKEN cDNA 2610020C07 gene
chr10_-_78487842	0.152	ENSMUST00000069431.4	Gm9978	predicted gene 9978
chr19_+_8764934	0.142	ENSMUST00000184663.1	Nxf1	nuclear RNA export factor 1
chr8_+_71951038	0.132	ENSMUST00000131237.1 ENSMUST00000136516.1 ENSMUST00000109997.2 ENSMUST00000132848.1	Zfp961	zinc finger protein 961
chr9_-_121839460	0.109	ENSMUST00000135986.2	Ccdc13	coiled-coil domain containing 13
chr2_+_158028481	0.089	ENSMUST00000103123.3	Rprd1b	regulation of nuclear pre-mRNA domain containing 1B
chrY_-_6237995	0.086	ENSMUST00000177612.1	Gm21746	predicted gene, 21746
chr11_-_101987004	0.081	ENSMUST00000107173.2 ENSMUST00000107172.1	Dusp3	dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
chr5_+_104046869	0.036	ENSMUST00000031250.7	Nudt9	nudix (nucleoside diphosphate linked moiety X)-type motif 9
chr5_-_62765618	0.010	ENSMUST00000159470.1	Arap2	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr17_+_56717759	0.002	ENSMUST00000002452.6	Ndufa11	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11
chr17_-_36951636	0.000	ENSMUST00000040402.7 ENSMUST00000174711.1	Ppp1r11	protein phosphatase 1, regulatory (inhibitor) subunit 11

Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.7	13.6	GO:0051661	maintenance of centrosome location(GO:0051661)
2.1	8.4	GO:0006776	vitamin A metabolic process(GO:0006776)
1.8	5.3	GO:0006097	glyoxylate cycle(GO:0006097) negative regulation of glial cell migration(GO:1903976)
1.2	6.2	GO:0007386	compartment pattern specification(GO:0007386)
1.2	4.6	GO:1904706	regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway(GO:0010578) positive regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway(GO:0010579) negative regulation of vascular smooth muscle cell proliferation(GO:1904706) positive regulation of vascular smooth muscle cell differentiation(GO:1905065)
0.8	2.4	GO:0021698	cerebellar cortex structural organization(GO:0021698)
0.7	2.0	GO:0001193	maintenance of transcriptional fidelity during DNA-templated transcription elongation(GO:0001192) maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter(GO:0001193)
0.5	1.4	GO:0048496	maintenance of organ identity(GO:0048496)
0.4	1.6	GO:0070318	positive regulation of G0 to G1 transition(GO:0070318)
0.3	1.2	GO:0060032	notochord regression(GO:0060032)
0.3	2.1	GO:2000002	negative regulation of DNA damage checkpoint(GO:2000002)
0.3	0.8	GO:1990046	positive regulation of mitochondrial DNA replication(GO:0090297) regulation of cardiolipin metabolic process(GO:1900208) positive regulation of cardiolipin metabolic process(GO:1900210) stress-induced mitochondrial fusion(GO:1990046)
0.3	2.3	GO:0035372	protein localization to microtubule(GO:0035372)
0.2	2.6	GO:0051923	sulfation(GO:0051923)
0.2	2.1	GO:0036159	outer dynein arm assembly(GO:0036158) inner dynein arm assembly(GO:0036159)
0.2	1.0	GO:0046208	spermine catabolic process(GO:0046208)
0.2	2.8	GO:0030150	protein import into mitochondrial matrix(GO:0030150)
0.1	0.4	GO:0002314	germinal center B cell differentiation(GO:0002314)
0.1	0.5	GO:0031581	hemidesmosome assembly(GO:0031581)
0.1	1.8	GO:2000096	positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096)
0.1	0.5	GO:0019614	catechol-containing compound catabolic process(GO:0019614) catecholamine catabolic process(GO:0042424)
0.1	0.6	GO:0097428	protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0	0.2	GO:0048539	bone marrow development(GO:0048539)
0.0	0.5	GO:1903862	positive regulation of oxidative phosphorylation(GO:1903862)
0.0	0.6	GO:0048672	positive regulation of collateral sprouting(GO:0048672)
0.0	0.7	GO:0035855	megakaryocyte development(GO:0035855)
0.0	0.2	GO:0007320	insemination(GO:0007320)
0.0	0.3	GO:0000712	resolution of meiotic recombination intermediates(GO:0000712)
0.0	2.6	GO:0050885	neuromuscular process controlling balance(GO:0050885)
0.0	0.8	GO:0045494	photoreceptor cell maintenance(GO:0045494)
0.0	0.4	GO:0006337	nucleosome disassembly(GO:0006337)
0.0	0.2	GO:0015670	carbon dioxide transport(GO:0015670)
0.0	2.0	GO:0051965	positive regulation of synapse assembly(GO:0051965)
0.0	1.4	GO:2000179	positive regulation of neural precursor cell proliferation(GO:2000179)
0.0	0.0	GO:0046032	ADP catabolic process(GO:0046032)

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.7	13.6	GO:0036449	microtubule minus-end(GO:0036449)
0.5	1.4	GO:0097543	ciliary inversin compartment(GO:0097543)
0.5	4.6	GO:0032591	dendritic spine membrane(GO:0032591)
0.3	0.9	GO:0032311	angiogenin-PRI complex(GO:0032311)
0.2	1.9	GO:0061574	ASAP complex(GO:0061574)
0.2	2.1	GO:0005688	U6 snRNP(GO:0005688)
0.1	9.0	GO:0005881	cytoplasmic microtubule(GO:0005881)
0.1	6.2	GO:0030173	integral component of Golgi membrane(GO:0030173)
0.1	1.2	GO:0097542	ciliary tip(GO:0097542)
0.1	2.0	GO:0005665	DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1	1.5	GO:0036038	MKS complex(GO:0036038)
0.1	2.4	GO:0051233	spindle midzone(GO:0051233)
0.1	8.9	GO:0000776	kinetochore(GO:0000776)
0.1	0.8	GO:0042101	T cell receptor complex(GO:0042101)
0.1	0.7	GO:0031209	SCAR complex(GO:0031209)
0.0	0.5	GO:0030056	hemidesmosome(GO:0030056)
0.0	0.9	GO:0001741	XY body(GO:0001741)
0.0	1.6	GO:0005801	cis-Golgi network(GO:0005801)
0.0	5.2	GO:0005777	peroxisome(GO:0005777) microbody(GO:0042579)
0.0	0.4	GO:0071564	npBAF complex(GO:0071564)
0.0	0.1	GO:0042405	nuclear inclusion body(GO:0042405)
0.0	3.3	GO:0005759	mitochondrial matrix(GO:0005759)

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.1	6.2	GO:0033829	O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity(GO:0033829)
1.8	5.3	GO:0004450	isocitrate dehydrogenase (NADP+) activity(GO:0004450)
1.4	8.4	GO:0019841	retinol binding(GO:0019841)
0.9	2.6	GO:0050656	3'-phosphoadenosine 5'-phosphosulfate binding(GO:0050656)
0.8	4.6	GO:0030284	estrogen receptor activity(GO:0030284)
0.4	2.1	GO:0030621	U4 snRNA binding(GO:0030621)
0.3	1.0	GO:0046592	polyamine oxidase activity(GO:0046592) spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.2	0.5	GO:0016206	catechol O-methyltransferase activity(GO:0016206)
0.1	0.6	GO:0008508	bile acid:sodium symporter activity(GO:0008508)
0.1	0.4	GO:0035673	oligopeptide transmembrane transporter activity(GO:0035673)
0.1	0.8	GO:1901612	phosphatidylglycerol binding(GO:1901611) cardiolipin binding(GO:1901612)
0.1	0.9	GO:0008428	ribonuclease inhibitor activity(GO:0008428)
0.1	0.6	GO:0070915	lysophosphatidic acid receptor activity(GO:0070915)
0.1	1.6	GO:0005520	insulin-like growth factor binding(GO:0005520)
0.1	2.4	GO:0008574	ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1	13.6	GO:0005516	calmodulin binding(GO:0005516)
0.0	2.0	GO:0003899	DNA-directed RNA polymerase activity(GO:0003899)
0.0	1.2	GO:1990841	promoter-specific chromatin binding(GO:1990841)
0.0	2.1	GO:0030331	estrogen receptor binding(GO:0030331)
0.0	0.7	GO:0030506	ankyrin binding(GO:0030506)
0.0	0.7	GO:0005164	tumor necrosis factor receptor binding(GO:0005164)
0.0	2.8	GO:0051087	chaperone binding(GO:0051087)
0.0	0.6	GO:0051537	2 iron, 2 sulfur cluster binding(GO:0051537)
0.0	2.3	GO:0051219	phosphoprotein binding(GO:0051219)
0.0	0.4	GO:0016922	ligand-dependent nuclear receptor binding(GO:0016922)

Gene overrepresentation in C2:CP category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	8.4	PID_RETINOIC_ACID_PATHWAY	Retinoic acid receptors-mediated signaling
0.0	3.1	PID_HEDGEHOG_GLI_PATHWAY	Hedgehog signaling events mediated by Gli proteins
0.0	1.8	ST_WNT_BETA_CATENIN_PATHWAY	Wnt/beta-catenin Pathway
0.0	1.6	PID_AMB2_NEUTROPHILS_PATHWAY	amb2 Integrin signaling
0.0	0.4	PID_ERB_GENOMIC_PATHWAY	Validated nuclear estrogen receptor beta network
0.0	0.7	PID_ECADHERIN_NASCENT_AJ_PATHWAY	E-cadherin signaling in the nascent adherens junction
0.0	0.6	PID_LYSOPHOSPHOLIPID_PATHWAY	LPA receptor mediated events

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	2.6	REACTOME_CYTOSOLIC_SULFONATION_OF_SMALL_MOLECULES	Genes involved in Cytosolic sulfonation of small molecules
0.3	6.2	REACTOME_PRE_NOTCH_PROCESSING_IN_GOLGI	Genes involved in Pre-NOTCH Processing in Golgi
0.2	5.3	REACTOME_CITRIC_ACID_CYCLE_TCA_CYCLE	Genes involved in Citric acid cycle (TCA cycle)
0.1	2.0	REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS	Genes involved in Viral Messenger RNA Synthesis
0.1	8.9	REACTOME_MITOTIC_PROMETAPHASE	Genes involved in Mitotic Prometaphase
0.1	1.0	REACTOME_METABOLISM_OF_POLYAMINES	Genes involved in Metabolism of polyamines
0.1	2.8	REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT	Genes involved in Mitochondrial Protein Import
0.1	1.4	REACTOME_CELL_EXTRACELLULAR_MATRIX_INTERACTIONS	Genes involved in Cell-extracellular matrix interactions
0.1	1.6	REACTOME_YAP1_AND_WWTR1_TAZ_STIMULATED_GENE_EXPRESSION	Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.0	1.5	REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES	Genes involved in Loss of Nlp from mitotic centrosomes
0.0	0.5	REACTOME_CASPASE_MEDIATED_CLEAVAGE_OF_CYTOSKELETAL_PROTEINS	Genes involved in Caspase-mediated cleavage of cytoskeletal proteins

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