Motif ID: Sox13

Z-value: 0.346


Transcription factors associated with Sox13:

Gene SymbolEntrez IDGene Name
Sox13 ENSMUSG00000070643.5 Sox13

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Sox13mm10_v2_chr1_-_133424377_1334244040.421.2e-03Click!


Activity profile for motif Sox13.

activity profile for motif Sox13


Sorted Z-values histogram for motif Sox13

Sorted Z-values for motif Sox13



Network of associatons between targets according to the STRING database.



First level regulatory network of Sox13

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr8_-_84773381 2.987 ENSMUST00000109764.1
 Nfix
nuclear factor I/X
chr2_+_25180737 2.146 ENSMUST00000104999.2
 Nrarp
Notch-regulated ankyrin repeat protein
chr3_+_34649987 2.010 ENSMUST00000099151.2
 Sox2
SRY-box containing gene 2
chr7_+_96210107 1.937 ENSMUST00000138760.1
 Tenm4
teneurin transmembrane protein 4
chr2_-_36104060 1.898 ENSMUST00000112961.3
ENSMUST00000112966.3
 Lhx6

LIM homeobox protein 6

chr1_+_19103022 1.522 ENSMUST00000037294.7
 Tfap2d
transcription factor AP-2, delta
chr18_+_69593361 1.068 ENSMUST00000114978.2
ENSMUST00000114977.1
 Tcf4

transcription factor 4

chr8_-_11008458 0.968 ENSMUST00000040514.6
 Irs2
insulin receptor substrate 2
chr4_-_58499398 0.878 ENSMUST00000107570.1
 Lpar1
lysophosphatidic acid receptor 1
chr7_-_132813095 0.808 ENSMUST00000106165.1
 Fam53b
family with sequence similarity 53, member B
chr1_+_135729147 0.547 ENSMUST00000027677.7
 Csrp1
cysteine and glycine-rich protein 1
chr12_+_36314160 0.512 ENSMUST00000041407.5
 Sostdc1
sclerostin domain containing 1
chr15_-_50890396 0.366 ENSMUST00000185183.1
 Trps1
trichorhinophalangeal syndrome I (human)
chr7_-_105787567 0.339 ENSMUST00000144189.1
 Dchs1
dachsous 1 (Drosophila)
chr1_-_93101825 0.309 ENSMUST00000112958.2
 Kif1a
kinesin family member 1A
chr18_+_64887690 0.275 ENSMUST00000163516.1
 Nedd4l
neural precursor cell expressed, developmentally down-regulated gene 4-like
chr15_-_91049823 0.245 ENSMUST00000088614.5
ENSMUST00000100304.4
ENSMUST00000067205.8
ENSMUST00000109288.2
ENSMUST00000109287.2
 Kif21a




kinesin family member 21A




chr3_+_60501252 0.210 ENSMUST00000099087.2
 Mbnl1
muscleblind-like 1 (Drosophila)
chr1_+_39900883 0.195 ENSMUST00000163854.2
ENSMUST00000168431.1
 Map4k4

mitogen-activated protein kinase kinase kinase kinase 4

chr19_-_7241216 0.174 ENSMUST00000025675.9
 Naa40
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
chr14_+_79515618 0.155 ENSMUST00000110835.1
 Elf1
E74-like factor 1
chr7_+_24271568 0.125 ENSMUST00000032696.6
 Zfp93
zinc finger protein 93
chr13_-_66851513 0.125 ENSMUST00000169322.1
 Gm17404
predicted gene, 17404
chr7_-_121035096 0.116 ENSMUST00000065740.2
 Gm9905
predicted gene 9905
chr11_-_77489666 0.093 ENSMUST00000037593.7
ENSMUST00000092892.3
 Ankrd13b

ankyrin repeat domain 13b

chr4_+_103143052 0.074 ENSMUST00000106855.1
 Mier1
mesoderm induction early response 1 homolog (Xenopus laevis
chr14_-_47568427 0.046 ENSMUST00000042988.6
 Atg14
autophagy related 14
chr13_-_66852017 0.036 ENSMUST00000059329.6
 Gm17449
predicted gene, 17449
chr5_-_8367982 0.035 ENSMUST00000088761.4
ENSMUST00000115386.1
ENSMUST00000050166.7
ENSMUST00000046838.7
ENSMUST00000115388.2
ENSMUST00000088744.5
ENSMUST00000115385.1
 Adam22






a disintegrin and metallopeptidase domain 22






chr2_-_119662756 0.030 ENSMUST00000028768.1
ENSMUST00000110801.1
ENSMUST00000110802.1
 Ndufaf1


NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1


chr5_-_24577467 0.026 ENSMUST00000030795.8
 Abcf2
ATP-binding cassette, sub-family F (GCN20), member 2
chr19_-_19001099 0.020 ENSMUST00000040153.8
ENSMUST00000112828.1
 Rorb

RAR-related orphan receptor beta

chr10_+_53596936 0.007 ENSMUST00000020004.6
 Asf1a
ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
chr12_+_24708984 0.002 ENSMUST00000154588.1
 Rrm2
ribonucleotide reductase M2

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.9 GO:0032289 central nervous system myelin formation(GO:0032289) cardiac cell fate specification(GO:0060912)
0.3 1.9 GO:1904936 cerebral cortex GABAergic interneuron migration(GO:0021853) interneuron migration(GO:1904936)
0.3 2.0 GO:0071699 olfactory placode formation(GO:0030910) olfactory placode development(GO:0071698) olfactory placode morphogenesis(GO:0071699)
0.2 0.9 GO:1904565 response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904565) cellular response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904566)
0.2 2.1 GO:0014807 regulation of somitogenesis(GO:0014807)
0.2 0.5 GO:2000016 negative regulation of determination of dorsal identity(GO:2000016)
0.2 3.0 GO:0021684 cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.1 1.1 GO:0042118 endothelial cell activation(GO:0042118)
0.1 1.0 GO:0002903 negative regulation of B cell apoptotic process(GO:0002903)
0.1 0.3 GO:0003192 mitral valve formation(GO:0003192) cell migration involved in endocardial cushion formation(GO:0003273) condensed mesenchymal cell proliferation(GO:0072137)
0.1 0.3 GO:2001286 regulation of caveolin-mediated endocytosis(GO:2001286)
0.0 1.5 GO:0030901 midbrain development(GO:0030901)
0.0 0.8 GO:0035411 catenin import into nucleus(GO:0035411)
0.0 0.3 GO:0022027 interkinetic nuclear migration(GO:0022027)
0.0 0.2 GO:0061179 negative regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061179)
0.0 0.4 GO:1902043 positive regulation of extrinsic apoptotic signaling pathway via death domain receptors(GO:1902043)
0.0 0.0 GO:0016240 autophagosome docking(GO:0016240)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0097629 extrinsic component of omegasome membrane(GO:0097629)
0.0 5.0 GO:0005667 transcription factor complex(GO:0005667)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.1 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.1 0.9 GO:0035727 lysophosphatidic acid binding(GO:0035727) lysophosphatidic acid receptor activity(GO:0070915)
0.1 2.0 GO:0035198 miRNA binding(GO:0035198)
0.1 0.5 GO:0098821 BMP receptor activity(GO:0098821)
0.1 0.2 GO:0001069 regulatory region RNA binding(GO:0001069)
0.0 0.2 GO:0004111 creatine kinase activity(GO:0004111)
0.0 0.2 GO:1990189 peptide-serine-N-acetyltransferase activity(GO:1990189)
0.0 0.3 GO:0019871 potassium channel inhibitor activity(GO:0019870) sodium channel inhibitor activity(GO:0019871)
0.0 1.0 GO:0071889 14-3-3 protein binding(GO:0071889)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.0 PID_EPO_PATHWAY EPO signaling pathway
0.0 1.1 PID_AR_PATHWAY Coregulation of Androgen receptor activity
0.0 0.9 PID_LYSOPHOSPHOLIPID_PATHWAY LPA receptor mediated events
0.0 0.5 PID_BMP_PATHWAY BMP receptor signaling

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.0 REACTOME_SIGNAL_ATTENUATION Genes involved in Signal attenuation
0.0 1.1 REACTOME_MYOGENESIS Genes involved in Myogenesis