mm10_v2_chr4_+_144892813_144892835	2.87691	Glis3	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr6_+_17463749_17463809	2.82575	Glis3	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr8_+_70501116_70501172	2.65293	Glis3	ENSMUST00000127983.1|Crlf1|ENSMUSG00000007888.9|cytokine receptor-like factor 1
mm10_v2_chr4_+_144893077_144893103	2.50488	Glis3	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr6_+_17463927_17464071	2.28412	Glis3	ENSMUST00000115442.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr4_+_144893127_144893151	2.24867	Glis3	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr6_+_17463826_17463829	2.12928	Glis3	ENSMUST00000140070.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr7_-_142657466_142657496	1.95979	Glis3	ENSMUST00000097936.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2 	ENSMUST00000000033.5|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr11_-_102296618_102296681	1.66873	Glis3	ENSMUST00000107132.2|Atxn7l3|ENSMUSG00000059995.6|ataxin 7-like 3 	ENSMUST00000073234.2|Atxn7l3|ENSMUSG00000059995.6|ataxin 7-like 3
mm10_v2_chr13_+_38345716_38345716	1.10681	Glis3	ENSMUST00000171970.1|Bmp6|ENSMUSG00000039004.5|bone morphogenetic protein 6
mm10_v2_chr10_-_68278713_68278735	1.0183	Glis3	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr3_+_52268337_52268388	0.973854	Glis3	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr2_+_32646586_32646602	0.807967	Glis3	ENSMUST00000009705.7|Eng|ENSMUSG00000026814.10|endoglin 	ENSMUST00000167841.1|Eng|ENSMUSG00000026814.10|endoglin
mm10_v2_chr11_+_5861886_5861966	0.763452	Glis3	ENSMUST00000102923.3|Aebp1|ENSMUSG00000020473.7|AE binding protein 1
mm10_v2_chrM_+_9452_9468	0.744364	Glis3	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm10_v2_chrX_-_136868537_136868755	0.722297	Glis3	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr1_-_64121389_64121452	0.658209	Glis3	ENSMUST00000055001.3|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr1_-_64121456_64121491	0.638556	Glis3	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr13_+_119690462_119690462	0.627821	Glis3	ENSMUST00000179869.1|Hmgcs1|ENSMUSG00000093930.1|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1
mm10_v2_chrM_+_8600_8616	0.567382	Glis3	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr14_+_45219993_45219993	0.529309	Glis3	ENSMUST00000146150.1|Gpr137c|ENSMUSG00000049092.10|G protein-coupled receptor 137C
mm10_v2_chr2_-_29253001_29253013	0.526071	Glis3	ENSMUST00000071201.4|Ntng2|ENSMUSG00000035513.13|netrin G2
mm10_v2_chr17_-_23745829_23745829	0.487538	Glis3	ENSMUST00000046525.8|Kremen2|ENSMUSG00000040680.8|kringle containing transmembrane protein 2
mm10_v2_chr13_-_40730416_40730429	0.473254	Glis3	ENSMUST00000021787.5|Tfap2a|ENSMUSG00000021359.9|transcription factor AP-2, alpha
mm10_v2_chr7_+_90442729_90442865	0.457734	Glis3	ENSMUST00000061767.4|Crebzf|ENSMUSG00000051451.5|CREB/ATF bZIP transcription factor 	ENSMUST00000107206.1|Crebzf|ENSMUSG00000051451.5|CREB/ATF bZIP transcription factor
mm10_v2_chr4_-_134018829_134018841	0.442127	Glis3	ENSMUST00000051674.2|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr13_+_118714678_118714701	0.429451	Glis3	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr14_+_55560480_55560533	0.421461	Glis3	ENSMUST00000121622.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000143431.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000150481.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr16_+_20733104_20733158	0.413672	Glis3	ENSMUST00000115423.1|Chrd|ENSMUSG00000006958.7|chordin 	ENSMUST00000007171.6|Chrd|ENSMUSG00000006958.7|chordin
mm10_v2_chr6_-_83572429_83572504	0.40489	Glis3	ENSMUST00000068054.7|Stambp|ENSMUSG00000006906.9|STAM binding protein
mm10_v2_chr11_-_85139939_85140038	0.402778	Glis3	ENSMUST00000108075.2|Usp32|ENSMUSG00000000804.8|ubiquitin specific peptidase 32
mm10_v2_chr1_-_168431896_168431905	0.394272	Glis3	ENSMUST00000176540.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chrX_-_7574120_7574312	0.393862	Glis3	ENSMUST00000045924.7|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000115742.2|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000150787.1|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F
mm10_v2_chr2_-_73892619_73892639	0.388361	Glis3	ENSMUST00000112007.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112016.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr2_-_73892530_73892555	0.387148	Glis3	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr11_-_72489904_72489979	0.373374	Glis3	ENSMUST00000045303.3|Spns2|ENSMUSG00000040447.9|spinster homolog 2
mm10_v2_chr3_-_94582716_94582741	0.360849	Glis3	ENSMUST00000029783.9|Snx27|ENSMUSG00000028136.9|sorting nexin family member 27
mm10_v2_chr2_-_73892588_73892616	0.36038	Glis3	ENSMUST00000154456.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000090802.4|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000055833.5|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr3_+_107595031_107595164	0.34701	Glis3	ENSMUST00000014747.1|Alx3|ENSMUSG00000014603.1|aristaless-like homeobox 3
mm10_v2_chr6_+_145934113_145934136	0.326484	Glis3	ENSMUST00000032383.7|Sspn|ENSMUSG00000030255.7|sarcospan
mm10_v2_chr9_-_108305941_108305958	0.306841	Glis3	ENSMUST00000044725.7|Tcta|ENSMUSG00000039461.7|T cell leukemia translocation altered gene
mm10_v2_chr2_-_152831112_152831326	0.306116	Glis3	ENSMUST00000128172.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr3_-_94582548_94582573	0.297857	Glis3	ENSMUST00000107283.1|Snx27|ENSMUSG00000028136.9|sorting nexin family member 27
mm10_v2_chr11_+_97663366_97663414	0.297397	Glis3	ENSMUST00000044730.5|Mllt6|ENSMUSG00000038437.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm10_v2_chr6_+_88198656_88198675	0.292569	Glis3	ENSMUST00000015197.7|Gata2|ENSMUSG00000015053.8|GATA binding protein 2
mm10_v2_chrX_-_38564519_38564555	0.284754	Glis3	ENSMUST00000016681.8|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr14_+_55561060_55561071	0.28113	Glis3	ENSMUST00000117701.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr14_+_54640952_54640952	0.28051	Glis3	ENSMUST00000169818.2|Gm17606|ENSMUSG00000091306.2|predicted gene, 17606
mm10_v2_chr7_+_25282179_25282254	0.27957	Glis3	ENSMUST00000163320.1|Cic|ENSMUSG00000005442.7|capicua homolog (Drosophila) 	ENSMUST00000005578.6|Cic|ENSMUSG00000005442.7|capicua homolog (Drosophila)
mm10_v2_chr14_-_55560340_55560406	0.276869	Glis3	ENSMUST00000066106.3|A730061H03Rik|ENSMUSG00000053588.3|RIKEN cDNA A730061H03 gene
mm10_v2_chr4_+_118428078_118428194	0.265518	Glis3	ENSMUST00000006557.6|Elovl1|ENSMUSG00000006390.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 	ENSMUST00000167636.1|Elovl1|ENSMUSG00000006390.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 	ENSMUST00000102673.4|Elovl1|ENSMUSG00000006390.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
mm10_v2_chr3_+_103914560_103914605	0.262603	Glis3	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr10_-_7663245_7663309	0.26183	Glis3	ENSMUST00000163085.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 	ENSMUST00000159917.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm10_v2_chr5_-_122989086_122989111	0.261163	Glis3	ENSMUST00000046073.9|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr9_+_56418624_56418681	0.260807	Glis3	ENSMUST00000034879.3|Hmg20a|ENSMUSG00000032329.3|high mobility group 20A
mm10_v2_chr3_-_66981279_66981318	0.25641	Glis3	ENSMUST00000162098.2|Shox2|ENSMUSG00000027833.10|short stature homeobox 2
mm10_v2_chr14_+_55560904_55560974	0.25179	Glis3	ENSMUST00000072530.4|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000128490.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chrX_-_101419788_101419914	0.250429	Glis3	ENSMUST00000117901.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000120201.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000117637.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000134005.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000121520.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3
mm10_v2_chr7_+_16875302_16875392	0.246682	Glis3	ENSMUST00000108493.1|Dact3|ENSMUSG00000078794.3|dapper homolog 3, antagonist of beta-catenin (xenopus)
mm10_v2_chr2_+_25242929_25243087	0.245661	Glis3	ENSMUST00000114355.1|Rnf208|ENSMUSG00000044628.4|ring finger protein 208 	ENSMUST00000060818.1|Rnf208|ENSMUSG00000044628.4|ring finger protein 208
mm10_v2_chr9_-_29412204_29412277	0.244012	Glis3	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr11_-_97187872_97187926	0.242031	Glis3	ENSMUST00000001479.4|Kpnb1|ENSMUSG00000001440.5|karyopherin (importin) beta 1
mm10_v2_chr11_-_115536181_115536276	0.23447	Glis3	ENSMUST00000118155.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast) 	ENSMUST00000153892.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast)
mm10_v2_chr7_-_4778141_4778144	0.227852	Glis3	ENSMUST00000094892.5|Il11|ENSMUSG00000004371.8|interleukin 11
mm10_v2_chrX_-_104201126_104201185	0.226697	Glis3	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr16_+_44173271_44173397	0.222333	Glis3	ENSMUST00000088356.4|Gm608|ENSMUSG00000068284.8|predicted gene 608 	ENSMUST00000169582.1|Gm608|ENSMUSG00000068284.8|predicted gene 608
mm10_v2_chr11_-_52000432_52000484	0.221885	Glis3	ENSMUST00000020657.6|Ube2b|ENSMUSG00000020390.6|ubiquitin-conjugating enzyme E2B
mm10_v2_chr2_-_18998126_18998202	0.221171	Glis3	ENSMUST00000006912.5|Pip4k2a|ENSMUSG00000026737.6|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
mm10_v2_chr11_-_96065350_96065388	0.219424	Glis3	ENSMUST00000100528.4|Ube2z|ENSMUSG00000014349.7|ubiquitin-conjugating enzyme E2Z (putative)
mm10_v2_chr5_+_104459450_104459580	0.21603	Glis3	ENSMUST00000086831.3|Pkd2|ENSMUSG00000034462.9|polycystic kidney disease 2
mm10_v2_chr17_+_37045963_37045975	0.205905	Glis3	ENSMUST00000025338.9|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr11_-_52000748_52000775	0.204023	Glis3	ENSMUST00000109086.1|Ube2b|ENSMUSG00000020390.6|ubiquitin-conjugating enzyme E2B
mm10_v2_chr5_-_121502980_121502980	0.200367	Glis3	ENSMUST00000079368.3|Adam1b|ENSMUSG00000062438.3|a disintegrin and metallopeptidase domain 1b
mm10_v2_chr11_+_77216180_77216287	0.196	Glis3	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr17_+_56326045_56326097	0.194385	Glis3	ENSMUST00000139679.1|Kdm4b|ENSMUSG00000024201.6|lysine (K)-specific demethylase 4B 	ENSMUST00000025036.4|Kdm4b|ENSMUSG00000024201.6|lysine (K)-specific demethylase 4B 	ENSMUST00000086835.5|Kdm4b|ENSMUSG00000024201.6|lysine (K)-specific demethylase 4B
mm10_v2_chr15_+_102407144_102407269	0.192286	Glis3	ENSMUST00000169619.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr11_-_115535804_115535863	0.183593	Glis3	ENSMUST00000117589.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast) 	ENSMUST00000121185.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast)
mm10_v2_chr13_+_119428888_119428960	0.180709	Glis3	ENSMUST00000026520.7|Paip1|ENSMUSG00000025451.9|polyadenylate binding protein-interacting protein 1
mm10_v2_chr19_+_8941865_8942050	0.178336	Glis3	ENSMUST00000096240.2|Mta2|ENSMUSG00000071646.3|metastasis-associated gene family, member 2
mm10_v2_chr13_-_107022027_107022138	0.162166	Glis3	ENSMUST00000117539.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000122233.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000022204.9|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A 	ENSMUST00000159772.1|Kif2a|ENSMUSG00000021693.13|kinesin family member 2A
mm10_v2_chr11_-_100619576_100619596	0.156816	Glis3	ENSMUST00000155152.1|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr6_+_95117740_95117880	0.156066	Glis3	ENSMUST00000032107.7|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8 	ENSMUST00000119582.1|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8
mm10_v2_chr15_+_102406143_102406380	0.154704	Glis3	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr3_-_89245829_89245899	0.154071	Glis3	ENSMUST00000041022.8|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr9_+_31280525_31280566	0.149437	Glis3	ENSMUST00000117389.1|Prdm10|ENSMUSG00000042496.11|PR domain containing 10
mm10_v2_chr6_+_108660616_108660682	0.148531	Glis3	ENSMUST00000032194.4|Bhlhe40|ENSMUSG00000030103.5|basic helix-loop-helix family, member e40
mm10_v2_chr9_+_108306205_108306267	0.14767	Glis3	ENSMUST00000007959.8|Rhoa|ENSMUSG00000007815.8|ras homolog gene family, member A
mm10_v2_chr10_-_105574435_105574451	0.144266	Glis3	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr17_-_65613521_65613555	0.141847	Glis3	ENSMUST00000024897.8|Vapa|ENSMUSG00000024091.8|vesicle-associated membrane protein, associated protein A
mm10_v2_chr12_+_69241832_69241901	0.141771	Glis3	ENSMUST00000063445.6|Klhdc1|ENSMUSG00000051890.7|kelch domain containing 1
mm10_v2_chr3_+_66981352_66981407	0.140635	Glis3	ENSMUST00000162036.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr4_-_120747248_120747404	0.139074	Glis3	ENSMUST00000030376.7|Kcnq4|ENSMUSG00000028631.7|potassium voltage-gated channel, subfamily Q, member 4
mm10_v2_chr10_+_61175206_61175262	0.137521	Glis3	ENSMUST00000079235.5|Tbata|ENSMUSG00000020096.13|thymus, brain and testes associated
mm10_v2_chr3_+_89245952_89245978	0.135468	Glis3	ENSMUST00000040888.5|Krtcap2|ENSMUSG00000042747.6|keratinocyte associated protein 2
mm10_v2_chr11_+_116030304_116030385	0.135386	Glis3	ENSMUST00000021116.5|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila) 	ENSMUST00000106452.1|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila)
mm10_v2_chr7_-_49636847_49636851	0.134633	Glis3	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr13_+_119428583_119428612	0.134479	Glis3	ENSMUST00000109203.2|Paip1|ENSMUSG00000025451.9|polyadenylate binding protein-interacting protein 1
mm10_v2_chr5_-_122989260_122989306	0.131047	Glis3	ENSMUST00000118027.1|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr11_+_69632927_69633002	0.119325	Glis3	ENSMUST00000018909.3|Fxr2|ENSMUSG00000018765.5|fragile X mental retardation, autosomal homolog 2
mm10_v2_chr7_+_25282784_25282810	0.113987	Glis3	ENSMUST00000165239.1|Cic|ENSMUSG00000005442.7|capicua homolog (Drosophila)
mm10_v2_chr3_+_96601084_96601139	0.112633	Glis3	ENSMUST00000062058.3|Lix1l|ENSMUSG00000049288.3|Lix1-like
mm10_v2_chrX_-_111697069_111697127	0.107819	Glis3	ENSMUST00000113422.2|Hdx|ENSMUSG00000034551.6|highly divergent homeobox 	ENSMUST00000038472.5|Hdx|ENSMUSG00000034551.6|highly divergent homeobox
mm10_v2_chr7_+_127746775_127746775	0.106323	Glis3	ENSMUST00000033081.7|Fbxl19|ENSMUSG00000030811.8|F-box and leucine-rich repeat protein 19
mm10_v2_chr10_-_127211528_127211626	0.0987858	Glis3	ENSMUST00000013970.7|Pip4k2c|ENSMUSG00000025417.7|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm10_v2_chr7_+_90130227_90130279	0.0872138	Glis3	ENSMUST00000049537.7|Picalm|ENSMUSG00000039361.9|phosphatidylinositol binding clathrin assembly protein
mm10_v2_chr7_-_142899985_142900014	0.0871485	Glis3	ENSMUST00000000219.3|Th|ENSMUSG00000000214.4|tyrosine hydroxylase
mm10_v2_chrX_+_71364901_71364937	0.0851935	Glis3	ENSMUST00000132837.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1
mm10_v2_chr2_-_119477613_119477705	0.0839858	Glis3	ENSMUST00000110808.1|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae) 	ENSMUST00000049920.7|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae)
mm10_v2_chr7_+_46796088_46796134	0.0825436	Glis3	ENSMUST00000006774.4|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1 	ENSMUST00000165031.1|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1
mm10_v2_chr5_-_72974702_72974702	0.0765178	Glis3	ENSMUST00000043711.8|Gm10135|ENSMUSG00000063656.6|predicted gene 10135
mm10_v2_chrX_-_94123087_94123159	0.0742369	Glis3	ENSMUST00000113925.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked
mm10_v2_chr7_+_25268387_25268420	0.0705507	Glis3	ENSMUST00000169392.1|Cic|ENSMUSG00000005442.7|capicua homolog (Drosophila)
mm10_v2_chr12_+_102949450_102949554	0.0700923	Glis3	ENSMUST00000179002.1|Unc79|ENSMUSG00000021198.10|unc-79 homolog (C. elegans)
mm10_v2_chr11_+_3289880_3289993	0.0681796	Glis3	ENSMUST00000110043.1|Patz1|ENSMUSG00000020453.11|POZ (BTB) and AT hook containing zinc finger 1 	ENSMUST00000094471.3|Patz1|ENSMUSG00000020453.11|POZ (BTB) and AT hook containing zinc finger 1
mm10_v2_chr11_-_102317860_102317877	0.0631331	Glis3	ENSMUST00000107117.2|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chrX_-_94542037_94542143	0.0609525	Glis3	ENSMUST00000026142.7|Maged1|ENSMUSG00000025151.10|melanoma antigen, family D, 1
mm10_v2_chr8_-_88362154_88362210	0.0600706	Glis3	ENSMUST00000034085.7|Brd7|ENSMUSG00000031660.7|bromodomain containing 7
mm10_v2_chr11_-_97744659_97744774	0.05729	Glis3	ENSMUST00000018691.8|Pip4k2b|ENSMUSG00000018547.8|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
mm10_v2_chrX_+_71364745_71364794	0.0443715	Glis3	ENSMUST00000114601.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000146213.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000015358.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1
mm10_v2_chr2_-_152831665_152831735	0.0396695	Glis3	ENSMUST00000156688.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000007803.5|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr11_+_70018421_70018484	0.0343255	Glis3	ENSMUST00000108588.1|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr6_-_122820606_122820625	0.0278444	Glis3	ENSMUST00000181317.1|Gm26826|ENSMUSG00000097635.1|predicted gene, 26826
mm10_v2_chr7_+_126781483_126781483	0.021519	Glis3	ENSMUST00000172352.1|Tbx6|ENSMUSG00000030699.10|T-box 6 	ENSMUST00000094037.4|Tbx6|ENSMUSG00000030699.10|T-box 6
mm10_v2_chr2_-_152830615_152830680	0.0151029	Glis3	ENSMUST00000146380.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000134902.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000134357.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000109820.3|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr16_+_20673264_20673420	0.00706592	Glis3	ENSMUST00000154950.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000115461.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1
mm10_v2_chr9_+_108460518_108460571	0.000841761	Glis3	ENSMUST00000061209.5|Ccdc71|ENSMUSG00000049305.5|coiled-coil domain containing 71
