mm10_v2_chr9_+_3017408_3017543	326.234	Hdx	ENSMUST00000099049.3|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr9_+_3015654_3015722	273.743	Hdx	ENSMUST00000099050.3|Gm10720|ENSMUSG00000074564.3|predicted gene 10720
mm10_v2_chr9_+_3023547_3023547	271.59	Hdx	ENSMUST00000099046.3|Gm10718|ENSMUSG00000095186.1|predicted gene 10718
mm10_v2_chr9_+_3005125_3005159	236.893	Hdx	ENSMUST00000179881.1|Gm11168|ENSMUSG00000096385.1|predicted gene 11168
mm10_v2_chr9_+_3000922_3000922	233.998	Hdx	ENSMUST00000151376.2|Gm10722|ENSMUSG00000091028.1|predicted gene 10722
mm10_v2_chr9_+_3027439_3027523	229.351	Hdx	ENSMUST00000177875.1|Gm10717|ENSMUSG00000095891.1|predicted gene 10717 	ENSMUST00000179982.1|Gm10717|ENSMUSG00000095891.1|predicted gene 10717
mm10_v2_chr9_+_3034599_3034599	224.522	Hdx	ENSMUST00000178641.1|Gm17535|ENSMUSG00000096736.1|predicted gene, 17535
mm10_v2_chr9_+_3025417_3025490	196.143	Hdx	ENSMUST00000075573.6|Gm10717|ENSMUSG00000095891.1|predicted gene 10717
mm10_v2_chr14_-_19418930_19418930	183.287	Hdx	ENSMUST00000177817.1|Gm21738|ENSMUSG00000095280.1|predicted gene, 21738
mm10_v2_chr9_+_3018753_3018779	156.733	Hdx	ENSMUST00000179272.1|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr9_+_3004457_3004523	145.352	Hdx	ENSMUST00000178348.1|Gm11168|ENSMUSG00000096385.1|predicted gene 11168
mm10_v2_chr9_+_3036877_3036877	144.587	Hdx	ENSMUST00000155807.2|Gm10715|ENSMUSG00000096201.1|predicted gene 10715
mm10_v2_chr9_+_3037111_3037111	135.671	Hdx	ENSMUST00000177969.1|Gm10715|ENSMUSG00000096201.1|predicted gene 10715
mm10_v2_chr9_+_3013140_3013140	128.08	Hdx	ENSMUST00000143083.2|Gm10721|ENSMUSG00000096519.1|predicted gene 10721
mm10_v2_chr2_-_98667264_98667301	98.258	Hdx	ENSMUST00000099683.1|Gm10800|ENSMUSG00000075014.1|predicted gene 10800
mm10_v2_chr6_-_23248264_23248390	24.396	Hdx	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr6_+_30568367_30568382	11.848	Hdx	ENSMUST00000049251.5|Cpa4|ENSMUSG00000039070.5|carboxypeptidase A4
mm10_v2_chr2_+_105682463_105682547	10.6974	Hdx	ENSMUST00000140173.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000135412.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000138365.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000145744.1|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr4_-_97584605_97584610	10.3382	Hdx	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr4_-_97584612_97584643	10.1951	Hdx	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr14_+_62292475_62292589	8.79479	Hdx	ENSMUST00000166879.1|Rnaseh2b|ENSMUSG00000021932.7|ribonuclease H2, subunit B
mm10_v2_chr13_+_24327415_24327461	8.53725	Hdx	ENSMUST00000167746.1|Cmah|ENSMUSG00000016756.10|cytidine monophospho-N-acetylneuraminic acid hydroxylase
mm10_v2_chr3_-_154330543_154330576	7.93096	Hdx	ENSMUST00000184966.1|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8 	ENSMUST00000177846.2|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8
mm10_v2_chr16_-_26989974_26989974	7.9304	Hdx	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chrX_+_56779699_56779819	6.61475	Hdx	ENSMUST00000114772.2|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000114768.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000155882.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr1_-_84935089_84935125	6.48016	Hdx	ENSMUST00000027422.5|Slc16a14|ENSMUSG00000026220.5|solute carrier family 16 (monocarboxylic acid transporters), member 14
mm10_v2_chr4_-_43031429_43031456	6.33979	Hdx	ENSMUST00000136326.1|Stoml2|ENSMUSG00000028455.9|stomatin (Epb7.2)-like 2
mm10_v2_chr13_+_23752267_23752351	6.13017	Hdx	ENSMUST00000091703.2|Hist1h3b|ENSMUSG00000069267.2|histone cluster 1, H3b
mm10_v2_chrX_-_143827391_143827414	5.75815	Hdx	ENSMUST00000087316.5|Capn6|ENSMUSG00000067276.5|calpain 6
mm10_v2_chr13_+_21717626_21717631	5.45196	Hdx	ENSMUST00000091754.2|Hist1h3h|ENSMUSG00000069312.2|histone cluster 1, H3h
mm10_v2_chr16_-_50432340_50432409	5.39156	Hdx	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chrX_+_56779437_56779565	5.2678	Hdx	ENSMUST00000114773.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr4_-_43031370_43031427	5.12457	Hdx	ENSMUST00000138030.1|Stoml2|ENSMUSG00000028455.9|stomatin (Epb7.2)-like 2
mm10_v2_chr4_+_89137122_89137122	5.11042	Hdx	ENSMUST00000058030.7|Mtap|ENSMUSG00000062937.5|methylthioadenosine phosphorylase
mm10_v2_chr14_+_70774304_70774353	4.69442	Hdx	ENSMUST00000022698.7|Dok2|ENSMUSG00000022102.7|docking protein 2
mm10_v2_chr3_+_95929325_95929386	4.65094	Hdx	ENSMUST00000171368.1|Anp32e|ENSMUSG00000015749.6|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENSMUST00000168106.1|Anp32e|ENSMUSG00000015749.6|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm10_v2_chr4_-_133753611_133753666	4.46361	Hdx	ENSMUST00000145664.2|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like) 	ENSMUST00000105897.3|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like)
mm10_v2_chr7_+_46847128_46847150	4.42443	Hdx	ENSMUST00000005051.4|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr11_-_109472611_109472688	4.41931	Hdx	ENSMUST00000168740.1|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr4_-_82850721_82850814	4.08406	Hdx	ENSMUST00000139401.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr4_+_3938904_3939043	3.68034	Hdx	ENSMUST00000120732.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENSMUST00000041122.4|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENSMUST00000121651.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENSMUST00000121210.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENSMUST00000119307.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENSMUST00000123769.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr16_-_50330987_50331017	3.60638	Hdx	ENSMUST00000114488.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr14_-_72602945_72603003	3.46331	Hdx	ENSMUST00000162825.1|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr11_-_89418948_89418948	3.45853	Hdx	ENSMUST00000050983.1|4932411E22Rik|ENSMUSG00000047490.1|RIKEN cDNA 4932411E22 gene
mm10_v2_chr7_-_89980935_89981009	3.4283	Hdx	ENSMUST00000107234.1|Eed|ENSMUSG00000030619.8|embryonic ectoderm development
mm10_v2_chr2_+_174415804_174415871	3.36059	Hdx	ENSMUST00000109075.1|Nelfcd|ENSMUSG00000016253.6|negative elongation factor complex member C/D, Th1l 	ENSMUST00000016397.6|Nelfcd|ENSMUSG00000016253.6|negative elongation factor complex member C/D, Th1l
mm10_v2_chr9_+_45055166_45055195	3.05672	Hdx	ENSMUST00000114664.1|Mpzl3|ENSMUSG00000070305.4|myelin protein zero-like 3 	ENSMUST00000093856.3|Mpzl3|ENSMUSG00000070305.4|myelin protein zero-like 3
mm10_v2_chr11_+_117232254_117232329	3.04211	Hdx	ENSMUST00000106354.2|Sept9|ENSMUSG00000059248.7|septin 9
mm10_v2_chr11_-_121204626_121204717	2.97643	Hdx	ENSMUST00000026169.6|Ogfod3|ENSMUSG00000025169.6|2-oxoglutarate and iron-dependent oxygenase domain containing 3
mm10_v2_chr14_+_24490678_24490689	2.74554	Hdx	ENSMUST00000169826.1|Rps24|ENSMUSG00000025290.10|ribosomal protein S24 	ENSMUST00000112384.3|Rps24|ENSMUSG00000025290.10|ribosomal protein S24
mm10_v2_chr18_-_47333311_47333373	2.58235	Hdx	ENSMUST00000126684.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000156422.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr15_+_10177623_10177655	2.33523	Hdx	ENSMUST00000124470.1|Prlr|ENSMUSG00000005268.14|prolactin receptor
mm10_v2_chrX_-_145505175_145505212	2.21416	Hdx	ENSMUST00000143610.1|Amot|ENSMUSG00000041688.10|angiomotin
mm10_v2_chr12_+_89812467_89812488	1.93047	Hdx	ENSMUST00000110133.2|Nrxn3|ENSMUSG00000066392.5|neurexin III 	ENSMUST00000110130.2|Nrxn3|ENSMUSG00000066392.5|neurexin III
mm10_v2_chr2_-_126618655_126618678	1.82819	Hdx	ENSMUST00000028838.4|Hdc|ENSMUSG00000027360.5|histidine decarboxylase
mm10_v2_chr7_+_13398115_13398132	1.73926	Hdx	ENSMUST00000005791.7|Cabp5|ENSMUSG00000005649.11|calcium binding protein 5
mm10_v2_chr14_+_13454010_13454123	1.66482	Hdx	ENSMUST00000112656.2|Synpr|ENSMUSG00000056296.10|synaptoporin
mm10_v2_chr5_-_27501362_27501438	1.60898	Hdx	ENSMUST00000155721.1|Speer4b|ENSMUSG00000048703.3|spermatogenesis associated glutamate (E)-rich protein 4b 	ENSMUST00000053257.3|Speer4b|ENSMUSG00000048703.3|spermatogenesis associated glutamate (E)-rich protein 4b
mm10_v2_chr14_+_73138755_73138778	1.60757	Hdx	ENSMUST00000171070.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr1_-_172027251_172027268	1.48529	Hdx	ENSMUST00000138714.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr10_+_94576254_94576270	1.44108	Hdx	ENSMUST00000117929.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr14_+_13453937_13453958	1.41375	Hdx	ENSMUST00000153954.1|Synpr|ENSMUSG00000056296.10|synaptoporin
mm10_v2_chr6_-_4086914_4086972	1.39251	Hdx	ENSMUST00000049166.4|Bet1|ENSMUSG00000032757.4|blocked early in transport 1 homolog (S. cerevisiae)
mm10_v2_chrX_+_164419782_164419824	1.36492	Hdx	ENSMUST00000033754.7|Piga|ENSMUSG00000031381.9|phosphatidylinositol glycan anchor biosynthesis, class A
mm10_v2_chr16_+_37539883_37539918	1.34521	Hdx	ENSMUST00000023524.6|Rabl3|ENSMUSG00000022827.8|RAB, member of RAS oncogene family-like 3
mm10_v2_chr16_+_14705832_14705858	1.25384	Hdx	ENSMUST00000023356.6|Snai2|ENSMUSG00000022676.6|snail homolog 2 (Drosophila)
mm10_v2_chr17_+_35059035_35059130	1.12266	Hdx	ENSMUST00000007255.6|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2 	ENSMUST00000174493.1|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2
mm10_v2_chr11_-_67965631_67965663	1.1186	Hdx	ENSMUST00000021287.5|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16 	ENSMUST00000126766.1|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16
mm10_v2_chr4_-_129640691_129640805	1.11635	Hdx	ENSMUST00000084264.5|Txlna|ENSMUSG00000053841.9|taxilin alpha
mm10_v2_chr18_-_35498856_35498925	0.994135	Hdx	ENSMUST00000025215.8|Sil1|ENSMUSG00000024357.9|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm10_v2_chr17_+_17402672_17402771	0.809625	Hdx	ENSMUST00000115576.2|Lix1|ENSMUSG00000047786.12|limb expression 1 homolog (chicken)
mm10_v2_chr4_-_149126688_149126763	0.714532	Hdx	ENSMUST00000030815.2|Cort|ENSMUSG00000028971.4|cortistatin
mm10_v2_chr4_-_129640959_129641051	0.663234	Hdx	ENSMUST00000132217.1|Txlna|ENSMUSG00000053841.9|taxilin alpha 	ENSMUST00000130017.1|Txlna|ENSMUSG00000053841.9|taxilin alpha 	ENSMUST00000154105.1|Txlna|ENSMUSG00000053841.9|taxilin alpha
mm10_v2_chr2_-_125123618_125123661	0.661614	Hdx	ENSMUST00000142718.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000152367.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000067780.3|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000147105.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor
mm10_v2_chr4_+_97777606_97777632	0.613967	Hdx	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr10_-_80918212_80918256	0.610249	Hdx	ENSMUST00000057623.7|Lmnb2|ENSMUSG00000062075.7|lamin B2 	ENSMUST00000179022.1|Lmnb2|ENSMUSG00000062075.7|lamin B2
mm10_v2_chr16_+_35938470_35938489	0.596015	Hdx	ENSMUST00000114878.1|Parp9|ENSMUSG00000022906.9|poly (ADP-ribose) polymerase family, member 9
mm10_v2_chr10_+_85928491_85928491	0.414293	Hdx	ENSMUST00000170396.1|Ascl4|ENSMUSG00000085111.2|achaete-scute complex homolog 4 (Drosophila)
mm10_v2_chrX_-_57338598_57338729	0.38115	Hdx	ENSMUST00000033468.4|Arhgef6|ENSMUSG00000031133.6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 	ENSMUST00000114736.1|Arhgef6|ENSMUSG00000031133.6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm10_v2_chr1_-_156674290_156674356	0.348616	Hdx	ENSMUST00000079625.4|Tor3a|ENSMUSG00000060519.5|torsin family 3, member A
mm10_v2_chr13_-_63431683_63431733	0.283803	Hdx	ENSMUST00000160931.1|Fancc|ENSMUSG00000021461.10|Fanconi anemia, complementation group C 	ENSMUST00000099444.3|Fancc|ENSMUSG00000021461.10|Fanconi anemia, complementation group C 	ENSMUST00000161977.1|Fancc|ENSMUSG00000021461.10|Fanconi anemia, complementation group C 	ENSMUST00000163091.1|Fancc|ENSMUSG00000021461.10|Fanconi anemia, complementation group C
mm10_v2_chr2_-_130629994_130630038	0.195708	Hdx	ENSMUST00000110262.1|Fastkd5|ENSMUSG00000079043.2|FAST kinase domains 5 	ENSMUST00000028761.4|Ubox5|ENSMUSG00000027300.9|U box domain containing 5
mm10_v2_chr19_+_8953826_8953856	0.171149	Hdx	ENSMUST00000096239.5|Tut1|ENSMUSG00000071645.5|terminal uridylyl transferase 1, U6 snRNA-specific
mm10_v2_chr13_+_43370710_43370710	0.168239	Hdx	ENSMUST00000066804.4|Sirt5|ENSMUSG00000054021.5|sirtuin 5
mm10_v2_chr6_+_34709610_34709635	0.0869763	Hdx	ENSMUST00000031775.6|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr5_+_90794530_90794546	0.0605838	Hdx	ENSMUST00000031322.6|Cxcl15|ENSMUSG00000029375.6|chemokine (C-X-C motif) ligand 15
mm10_v2_chr7_-_128596278_128596278	0.0558082	Hdx	ENSMUST00000179317.1|Gm7258|ENSMUSG00000096557.1|predicted gene 7258
