mm10_v2_chr4_-_117178726_117178754	7.27581	Homez	ENSMUST00000153953.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C 	ENSMUST00000106436.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr6_-_23248264_23248390	6.68761	Homez	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr4_+_44300876_44300936	5.89107	Homez	ENSMUST00000045607.5|Melk|ENSMUSG00000035683.7|maternal embryonic leucine zipper kinase
mm10_v2_chr11_+_101627942_101627972	5.26482	Homez	ENSMUST00000010506.3|Rdm1|ENSMUSG00000010362.3|RAD52 motif 1
mm10_v2_chr8_-_4779513_4779591	5.04422	Homez	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr16_-_26989974_26989974	4.147	Homez	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chr8_+_116921735_116921752	3.68552	Homez	ENSMUST00000034205.4|Cenpn|ENSMUSG00000031756.4|centromere protein N
mm10_v2_chr8_-_72305276_72305276	3.67571	Homez	ENSMUST00000075602.6|Gm10282|ENSMUSG00000070713.4|predicted pseudogene 10282
mm10_v2_chr18_+_50030977_50031043	3.61494	Homez	ENSMUST00000145726.1|Tnfaip8|ENSMUSG00000062210.7|tumor necrosis factor, alpha-induced protein 8 	ENSMUST00000128377.1|Tnfaip8|ENSMUSG00000062210.7|tumor necrosis factor, alpha-induced protein 8
mm10_v2_chr3_+_90220783_90220830	3.45646	Homez	ENSMUST00000065418.6|Rab13|ENSMUSG00000027935.8|RAB13, member RAS oncogene family
mm10_v2_chr3_+_5218546_5218561	3.13105	Homez	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr6_+_137754529_137754599	3.12184	Homez	ENSMUST00000087675.6|Dera|ENSMUSG00000030225.9|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)
mm10_v2_chr9_+_91368811_91368828	3.06606	Homez	ENSMUST00000173054.1|Zic4|ENSMUSG00000036972.8|zinc finger protein of the cerebellum 4
mm10_v2_chr17_+_24426676_24426701	3.04065	Homez	ENSMUST00000024946.5|Eci1|ENSMUSG00000024132.5|enoyl-Coenzyme A delta isomerase 1
mm10_v2_chr7_+_67647405_67647456	2.93412	Homez	ENSMUST00000032774.8|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23 	ENSMUST00000107471.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr9_+_91368970_91369073	2.8836	Homez	ENSMUST00000172646.1|Zic4|ENSMUSG00000036972.8|zinc finger protein of the cerebellum 4
mm10_v2_chr18_-_62756275_62756347	2.80361	Homez	ENSMUST00000067450.1|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene 	ENSMUST00000048109.5|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene
mm10_v2_chr1_-_20820213_20820286	2.73622	Homez	ENSMUST00000053266.9|Mcm3|ENSMUSG00000041859.9|minichromosome maintenance deficient 3 (S. cerevisiae)
mm10_v2_chr9_-_36726374_36726658	2.57478	Homez	ENSMUST00000172702.2|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000172742.1|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000034625.5|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1
mm10_v2_chr7_-_62464505_62464548	2.49192	Homez	ENSMUST00000094339.2|Peg12|ENSMUSG00000070526.2|paternally expressed 12
mm10_v2_chr19_-_30175414_30175436	2.48204	Homez	ENSMUST00000025778.7|Gldc|ENSMUSG00000024827.9|glycine decarboxylase
mm10_v2_chr1_-_138619687_138619759	2.395	Homez	ENSMUST00000027642.2|Nek7|ENSMUSG00000026393.4|NIMA (never in mitosis gene a)-related expressed kinase 7
mm10_v2_chr17_+_87635974_87635990	2.37482	Homez	ENSMUST00000053577.8|Epcam|ENSMUSG00000045394.8|epithelial cell adhesion molecule
mm10_v2_chr18_+_84088077_84088178	2.36789	Homez	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr8_-_116921408_116921455	2.35059	Homez	ENSMUST00000078589.6|Cmc2|ENSMUSG00000014633.9|COX assembly mitochondrial protein 2 	ENSMUST00000148235.1|Cmc2|ENSMUSG00000014633.9|COX assembly mitochondrial protein 2
mm10_v2_chr5_-_8422695_8422727	2.34584	Homez	ENSMUST00000171808.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr8_-_116921365_116921392	2.26901	Homez	ENSMUST00000128304.1|Cmc2|ENSMUSG00000014633.9|COX assembly mitochondrial protein 2
mm10_v2_chr5_-_8422582_8422693	2.25672	Homez	ENSMUST00000168500.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae) 	ENSMUST00000002368.9|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr2_+_71389239_71389278	2.22067	Homez	ENSMUST00000028408.2|Hat1|ENSMUSG00000027018.5|histone aminotransferase 1
mm10_v2_chr9_-_64172879_64172918	2.2147	Homez	ENSMUST00000176299.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000130127.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000176794.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000177045.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein
mm10_v2_chr19_-_36919606_36919622	2.06703	Homez	ENSMUST00000057337.7|Fgfbp3|ENSMUSG00000047632.10|fibroblast growth factor binding protein 3
mm10_v2_chr11_-_48826500_48826500	1.99655	Homez	ENSMUST00000161192.2|Gm12184|ENSMUSG00000078154.2|predicted gene 12184
mm10_v2_chr6_+_85587524_85587544	1.98746	Homez	ENSMUST00000072018.5|Alms1|ENSMUSG00000063810.5|Alstrom syndrome 1
mm10_v2_chr3_-_63899437_63899477	1.94485	Homez	ENSMUST00000159188.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000177143.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr1_-_14310198_14310218	1.91066	Homez	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr1_-_163994767_163994808	1.9061	Homez	ENSMUST00000097493.3|BC055324|ENSMUSG00000041406.8|cDNA sequence BC055324 	ENSMUST00000045876.6|BC055324|ENSMUSG00000041406.8|cDNA sequence BC055324
mm10_v2_chr7_-_30664986_30664999	1.89546	Homez	ENSMUST00000019697.8|Haus5|ENSMUSG00000078762.4|HAUS augmin-like complex, subunit 5
mm10_v2_chr4_-_116994354_116994372	1.87151	Homez	ENSMUST00000130273.1|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr3_+_5218516_5218544	1.84033	Homez	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chrX_+_139217166_139217190	1.83595	Homez	ENSMUST00000166444.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000170671.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113041.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113042.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1
mm10_v2_chr7_-_38227975_38228000	1.82983	Homez	ENSMUST00000098513.4|Plekhf1|ENSMUSG00000074170.4|pleckstrin homology domain containing, family F (with FYVE domain) member 1
mm10_v2_chr14_-_47276790_47276848	1.77683	Homez	ENSMUST00000111792.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1 	ENSMUST00000111791.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1 	ENSMUST00000111790.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1
mm10_v2_chr14_-_27508460_27508503	1.74674	Homez	ENSMUST00000050480.6|Ccdc66|ENSMUSG00000046753.9|coiled-coil domain containing 66
mm10_v2_chr3_-_79841729_79841729	1.72787	Homez	ENSMUST00000168038.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr4_-_116994374_116994413	1.69005	Homez	ENSMUST00000030446.8|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr4_+_63215402_63215435	1.64204	Homez	ENSMUST00000036300.6|Col27a1|ENSMUSG00000045672.9|collagen, type XXVII, alpha 1
mm10_v2_chr8_-_84065137_84065137	1.64007	Homez	ENSMUST00000098592.2|Gm10643|ENSMUSG00000074215.2|predicted gene 10643
mm10_v2_chrX_+_36795642_36795653	1.63783	Homez	ENSMUST00000016463.3|Slc25a5|ENSMUSG00000016319.3|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm10_v2_chr11_-_106998483_106998491	1.62278	Homez	ENSMUST00000124541.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr1_-_136230289_136230332	1.56965	Homez	ENSMUST00000150163.1|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene 	ENSMUST00000144464.1|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene
mm10_v2_chr3_+_138143429_138143477	1.45334	Homez	ENSMUST00000040321.6|Trmt10a|ENSMUSG00000004127.6|tRNA methyltransferase 10A
mm10_v2_chr18_+_86711059_86711110	1.43535	Homez	ENSMUST00000068423.3|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr9_+_89199319_89199379	1.40178	Homez	ENSMUST00000138109.1|Mthfs|ENSMUSG00000066442.10|5, 10-methenyltetrahydrofolate synthetase
mm10_v2_chr1_+_173420567_173420622	1.37906	Homez	ENSMUST00000173023.1|Aim2|ENSMUSG00000037860.9|absent in melanoma 2
mm10_v2_chr13_-_23698454_23698460	1.33356	Homez	ENSMUST00000102967.1|Hist1h4c|ENSMUSG00000060678.4|histone cluster 1, H4c
mm10_v2_chr8_+_36094828_36094868	1.32693	Homez	ENSMUST00000110492.1|D8Ertd82e|ENSMUSG00000050271.6|DNA segment, Chr 8, ERATO Doi 82, expressed
mm10_v2_chr15_+_79891631_79891694	1.32681	Homez	ENSMUST00000177350.1|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 	ENSMUST00000177483.1|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm10_v2_chr6_-_56362356_56362519	1.32458	Homez	ENSMUST00000044505.7|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000166102.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000164037.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000114327.2|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C
mm10_v2_chr6_+_71282280_71282280	1.31943	Homez	ENSMUST00000080949.7|Krcc1|ENSMUSG00000053012.11|lysine-rich coiled-coil 1
mm10_v2_chr14_-_54653616_54653701	1.30108	Homez	ENSMUST00000126166.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000141453.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000150371.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000123875.1|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000022794.7|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1 	ENSMUST00000148754.3|Acin1|ENSMUSG00000022185.12|apoptotic chromatin condensation inducer 1
mm10_v2_chr11_-_94242701_94242729	1.27601	Homez	ENSMUST00000061469.3|Wfikkn2|ENSMUSG00000044177.4|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
mm10_v2_chr13_-_85127514_85127514	1.27085	Homez	ENSMUST00000179230.1|Gm4076|ENSMUSG00000096449.1|predicted gene 4076
mm10_v2_chr1_-_139377041_139377078	1.25719	Homez	ENSMUST00000059825.5|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chr4_-_134767940_134768024	1.25353	Homez	ENSMUST00000037828.6|Ldlrap1|ENSMUSG00000037295.6|low density lipoprotein receptor adaptor protein 1
mm10_v2_chrM_+_11734_11757	1.23489	Homez	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr15_+_79895017_79895036	1.22055	Homez	ENSMUST00000023054.7|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm10_v2_chr11_+_75999912_75999946	1.21816	Homez	ENSMUST00000066408.5|1700016K19Rik|ENSMUSG00000053783.5|RIKEN cDNA 1700016K19 gene
mm10_v2_chr9_-_100486788_100486788	1.19203	Homez	ENSMUST00000098458.3|Il20rb|ENSMUSG00000044244.12|interleukin 20 receptor beta
mm10_v2_chr3_+_127791374_127791390	1.17788	Homez	ENSMUST00000171621.1|Tifa|ENSMUSG00000046688.8|TRAF-interacting protein with forkhead-associated domain
mm10_v2_chr3_+_85915722_85915722	1.17671	Homez	ENSMUST00000054148.7|Gm9790|ENSMUSG00000044330.7|predicted gene 9790
mm10_v2_chr15_-_83464595_83464614	1.175	Homez	ENSMUST00000171436.1|Pacsin2|ENSMUSG00000016664.8|protein kinase C and casein kinase substrate in neurons 2
mm10_v2_chrX_-_157568983_157568991	1.17131	Homez	ENSMUST00000065806.4|Yy2|ENSMUSG00000091736.2|Yy2 transcription factor
mm10_v2_chr10_+_63386550_63386576	1.16393	Homez	ENSMUST00000043317.5|Dnajc12|ENSMUSG00000036764.5|DnaJ (Hsp40) homolog, subfamily C, member 12
mm10_v2_chr3_+_51415986_51416044	1.1109	Homez	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr3_-_90514250_90514392	1.08423	Homez	ENSMUST00000107340.1|S100a1|ENSMUSG00000044080.9|S100 calcium binding protein A1 	ENSMUST00000060738.8|S100a1|ENSMUSG00000044080.9|S100 calcium binding protein A1
mm10_v2_chr5_-_149051300_149051390	1.06325	Homez	ENSMUST00000110505.1|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr5_+_21785253_21785301	1.05793	Homez	ENSMUST00000030769.5|Psmc2|ENSMUSG00000028932.7|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm10_v2_chr1_+_169969409_169969454	1.03591	Homez	ENSMUST00000180638.1|3110045C21Rik|ENSMUSG00000097503.1|RIKEN cDNA 3110045C21 gene
mm10_v2_chr2_-_25332481_25332571	1.02558	Homez	ENSMUST00000180841.1|AA543186|ENSMUSG00000097345.1|expressed sequence AA543186
mm10_v2_chr8_+_85171322_85171322	1.01915	Homez	ENSMUST00000076896.5|Gm6531|ENSMUSG00000062687.5|predicted gene 6531
mm10_v2_chr5_+_129846980_129847036	1.0184	Homez	ENSMUST00000171300.1|Sumf2|ENSMUSG00000025538.9|sulfatase modifying factor 2
mm10_v2_chr3_+_5218589_5218614	1.00218	Homez	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chrM_+_7759_7927	0.996302	Homez	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr6_-_42645254_42645254	0.994927	Homez	ENSMUST00000031879.3|Fam115c|ENSMUSG00000029851.4|family with sequence similarity 115, member C
mm10_v2_chr4_-_107810948_107810948	0.988365	Homez	ENSMUST00000097930.1|B230314M03Rik|ENSMUSG00000073779.1|RIKEN cDNA B230314M03 gene
mm10_v2_chr13_+_21810428_21810465	0.977946	Homez	ENSMUST00000091745.5|Hist1h2ao|ENSMUSG00000094248.1|histone cluster 1, H2ao
mm10_v2_chr9_+_87022014_87022179	0.976444	Homez	ENSMUST00000168529.2|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000174724.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000173126.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4
mm10_v2_chrX_+_20059535_20059574	0.956687	Homez	ENSMUST00000044138.7|Chst7|ENSMUSG00000037347.7|carbohydrate (N-acetylglucosamino) sulfotransferase 7
mm10_v2_chr7_+_127470354_127470371	0.942947	Homez	ENSMUST00000106292.1|Prr14|ENSMUSG00000030822.9|proline rich 14
mm10_v2_chr18_+_10725530_10725564	0.942787	Homez	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr2_-_77946331_77946373	0.92874	Homez	ENSMUST00000111821.2|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000111818.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr12_+_65036319_65036358	0.910531	Homez	ENSMUST00000120580.1|Prpf39|ENSMUSG00000035597.12|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm10_v2_chr9_-_58249660_58249672	0.903561	Homez	ENSMUST00000124063.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000126690.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia
mm10_v2_chr17_+_26542760_26542760	0.889363	Homez	ENSMUST00000090257.4|Gm8225|ENSMUSG00000068604.4|predicted gene 8225
mm10_v2_chr4_+_115057410_115057438	0.865893	Homez	ENSMUST00000136946.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr2_-_77946375_77946392	0.863766	Homez	ENSMUST00000065889.3|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr13_+_22043189_22043214	0.863142	Homez	ENSMUST00000110452.1|Hist1h2bj|ENSMUSG00000069300.3|histone cluster 1, H2bj
mm10_v2_chr2_-_106974383_106974424	0.855371	Homez	ENSMUST00000028536.6|Arl14ep|ENSMUSG00000027122.9|ADP-ribosylation factor-like 14 effector protein
mm10_v2_chr8_+_105900421_105900467	0.85383	Homez	ENSMUST00000049699.8|Pskh1|ENSMUSG00000048310.8|protein serine kinase H1
mm10_v2_chr2_-_127792467_127792505	0.841496	Homez	ENSMUST00000135091.1|1500011K16Rik|ENSMUSG00000051319.6|RIKEN cDNA 1500011K16 gene
mm10_v2_chr6_+_149141638_149141663	0.83423	Homez	ENSMUST00000166416.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20 	ENSMUST00000111551.1|Mettl20|ENSMUSG00000039958.11|methyltransferase like 20
mm10_v2_chr3_-_138143352_138143396	0.829662	Homez	ENSMUST00000098580.2|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr10_-_63421739_63421739	0.810752	Homez	ENSMUST00000054760.4|Gm7075|ENSMUSG00000048185.4|predicted gene 7075
mm10_v2_chr9_-_44251464_44251491	0.801089	Homez	ENSMUST00000034618.4|Pdzd3|ENSMUSG00000032105.4|PDZ domain containing 3
mm10_v2_chr6_+_120463197_120463253	0.789154	Homez	ENSMUST00000002976.3|Il17ra|ENSMUSG00000002897.3|interleukin 17 receptor A
mm10_v2_chr10_+_24595623_24595780	0.763056	Homez	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr11_+_77686155_77686179	0.743405	Homez	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr6_+_128662379_128662396	0.739276	Homez	ENSMUST00000032518.4|Clec2h|ENSMUSG00000030364.4|C-type lectin domain family 2, member h
mm10_v2_chr12_-_69184056_69184083	0.726633	Homez	ENSMUST00000054544.6|Rpl36al|ENSMUSG00000049751.6|ribosomal protein L36A-like
mm10_v2_chr4_+_115057683_115057811	0.723598	Homez	ENSMUST00000161601.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr5_-_21785115_21785251	0.719221	Homez	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chr10_+_127849917_127849928	0.702591	Homez	ENSMUST00000077530.2|Rdh19|ENSMUSG00000054052.5|retinol dehydrogenase 19
mm10_v2_chr11_+_116280939_116280939	0.699679	Homez	ENSMUST00000055872.2|Galr2|ENSMUSG00000020793.5|galanin receptor 2
mm10_v2_chr2_-_174464063_174464105	0.690302	Homez	ENSMUST00000016396.7|Atp5e|ENSMUSG00000016252.7|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
mm10_v2_chr2_-_58052832_58052870	0.67707	Homez	ENSMUST00000090940.5|Ermn|ENSMUSG00000026830.9|ermin, ERM-like protein
mm10_v2_chr19_-_60790692_60790700	0.673365	Homez	ENSMUST00000025955.6|Eif3a|ENSMUSG00000024991.7|eukaryotic translation initiation factor 3, subunit A
mm10_v2_chr5_-_45856496_45856552	0.657829	Homez	ENSMUST00000087164.3|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like 	ENSMUST00000121573.1|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like
mm10_v2_chr9_+_108339048_108339080	0.657343	Homez	ENSMUST00000082429.5|Gpx1|ENSMUSG00000063856.6|glutathione peroxidase 1
mm10_v2_chr2_-_77946180_77946199	0.654813	Homez	ENSMUST00000111824.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000111819.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000128963.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr1_-_175979114_175979114	0.634859	Homez	ENSMUST00000104983.1|B020018G12Rik|ENSMUSG00000078184.1|RIKEN cDNA B020018G12 gene
mm10_v2_chr10_+_24595434_24595445	0.629102	Homez	ENSMUST00000020171.5|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr6_+_30723541_30723552	0.628757	Homez	ENSMUST00000115127.1|Mest|ENSMUSG00000051855.9|mesoderm specific transcript
mm10_v2_chr5_-_87490869_87490875	0.626359	Homez	ENSMUST00000147854.1|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1
mm10_v2_chr1_+_87214286_87214369	0.61743	Homez	ENSMUST00000113231.3|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2
mm10_v2_chr19_+_47731743_47731768	0.610737	Homez	ENSMUST00000099353.4|Sfr1|ENSMUSG00000025066.9|SWI5 dependent recombination repair 1
mm10_v2_chr1_+_92906959_92907036	0.605978	Homez	ENSMUST00000060913.6|Dusp28|ENSMUSG00000047067.6|dual specificity phosphatase 28
mm10_v2_chr3_+_157534103_157534160	0.601555	Homez	ENSMUST00000106058.1|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2
mm10_v2_chr16_-_8672145_8672161	0.595205	Homez	ENSMUST00000008537.8|Carhsp1|ENSMUSG00000008393.8|calcium regulated heat stable protein 1
mm10_v2_chr18_+_4375583_4375623	0.58762	Homez	ENSMUST00000025077.6|Mtpap|ENSMUSG00000024234.6|mitochondrial poly(A) polymerase
mm10_v2_chr10_-_80039674_80039795	0.587362	Homez	ENSMUST00000004786.9|Polr2e|ENSMUSG00000004667.12|polymerase (RNA) II (DNA directed) polypeptide E
mm10_v2_chr1_-_72212249_72212307	0.564395	Homez	ENSMUST00000048860.7|Mreg|ENSMUSG00000039395.7|melanoregulin
mm10_v2_chr1_+_172698046_172698063	0.550772	Homez	ENSMUST00000038495.3|Crp|ENSMUSG00000037942.4|C-reactive protein, pentraxin-related
mm10_v2_chr6_-_112696604_112696686	0.54568	Homez	ENSMUST00000113182.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000113180.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000068487.5|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000077088.4|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae)
mm10_v2_chr9_-_58249702_58249791	0.528772	Homez	ENSMUST00000135310.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000085673.4|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000114136.2|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000153820.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000124982.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia
mm10_v2_chr1_+_44147847_44147934	0.524778	Homez	ENSMUST00000027214.3|Ercc5|ENSMUSG00000026048.10|excision repair cross-complementing rodent repair deficiency, complementation group 5
mm10_v2_chr17_+_17316078_17316078	0.515763	Homez	ENSMUST00000105311.3|Gm6712|ENSMUSG00000072761.4|predicted gene 6712
mm10_v2_chr8_+_70673198_70673267	0.513084	Homez	ENSMUST00000034311.8|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr2_+_69723071_69723093	0.509448	Homez	ENSMUST00000040915.8|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chrX_-_49788204_49788243	0.499825	Homez	ENSMUST00000114893.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chr10_+_128747850_128747895	0.489179	Homez	ENSMUST00000163377.2|Wibg|ENSMUSG00000064030.8|within bgcn homolog (Drosophila)
mm10_v2_chr9_+_64179289_64179349	0.486064	Homez	ENSMUST00000034965.6|Snapc5|ENSMUSG00000032398.6|small nuclear RNA activating complex, polypeptide 5
mm10_v2_chr5_-_140830430_140830453	0.461546	Homez	ENSMUST00000000153.4|Gna12|ENSMUSG00000000149.6|guanine nucleotide binding protein, alpha 12
mm10_v2_chr12_-_69183986_69184051	0.458377	Homez	ENSMUST00000110620.1|Rpl36al|ENSMUSG00000049751.6|ribosomal protein L36A-like 	ENSMUST00000110619.1|Rpl36al|ENSMUSG00000049751.6|ribosomal protein L36A-like
mm10_v2_chr19_-_31765027_31765079	0.446141	Homez	ENSMUST00000065067.6|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr13_+_90923122_90923170	0.445013	Homez	ENSMUST00000051955.7|Rps23|ENSMUSG00000049517.7|ribosomal protein S23
mm10_v2_chr6_+_83034173_83034252	0.441839	Homez	ENSMUST00000000707.2|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3 	ENSMUST00000101257.3|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3
mm10_v2_chr18_+_7869159_7869209	0.43703	Homez	ENSMUST00000170932.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil 	ENSMUST00000167020.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil
mm10_v2_chr4_+_152325831_152325876	0.43238	Homez	ENSMUST00000103191.4|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22 	ENSMUST00000139685.1|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22
mm10_v2_chr2_+_180582712_180582742	0.431406	Homez	ENSMUST00000029085.8|Mrgbp|ENSMUSG00000027569.9|MRG/MORF4L binding protein
mm10_v2_chr5_+_140735526_140735567	0.430578	Homez	ENSMUST00000120630.2|Amz1|ENSMUSG00000050022.10|archaelysin family metallopeptidase 1
mm10_v2_chr7_+_97480928_97480966	0.427652	Homez	ENSMUST00000026126.8|Ints4|ENSMUSG00000025133.8|integrator complex subunit 4
mm10_v2_chr14_-_52305056_52305130	0.424452	Homez	ENSMUST00000174853.1|Mettl3|ENSMUSG00000022160.11|methyltransferase like 3 	ENSMUST00000022767.9|Mettl3|ENSMUSG00000022160.11|methyltransferase like 3
mm10_v2_chr8_+_70673364_70673432	0.415078	Homez	ENSMUST00000146972.1|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr15_+_9071252_9071273	0.41433	Homez	ENSMUST00000100789.4|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial 	ENSMUST00000100790.3|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial 	ENSMUST00000067760.4|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial
mm10_v2_chr14_-_100149764_100149764	0.412555	Homez	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr16_+_34690548_34690616	0.41238	Homez	ENSMUST00000023532.6|Ccdc14|ENSMUSG00000022833.6|coiled-coil domain containing 14
mm10_v2_chr15_+_79659196_79659267	0.411687	Homez	ENSMUST00000023064.7|Cby1|ENSMUSG00000022428.7|chibby homolog 1 (Drosophila)
mm10_v2_chr2_+_69722797_69722840	0.405627	Homez	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr1_+_59684949_59685023	0.400267	Homez	ENSMUST00000027174.3|Nop58|ENSMUSG00000026020.3|NOP58 ribonucleoprotein
mm10_v2_chr6_-_55175019_55175043	0.395937	Homez	ENSMUST00000003569.5|Inmt|ENSMUSG00000003477.5|indolethylamine N-methyltransferase
mm10_v2_chr2_-_93849679_93849836	0.394034	Homez	ENSMUST00000068513.4|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000041593.8|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000130077.1|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional)
mm10_v2_chr7_+_49910112_49910146	0.389656	Homez	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr17_+_22689771_22689771	0.380761	Homez	ENSMUST00000055305.8|Gm9805|ENSMUSG00000046088.8|predicted gene 9805
mm10_v2_chr2_+_163017354_163017513	0.38064	Homez	ENSMUST00000018002.6|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52 	ENSMUST00000150396.1|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52
mm10_v2_chr16_-_91069142_91069159	0.372805	Homez	ENSMUST00000035689.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene 	ENSMUST00000114076.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene
mm10_v2_chr5_-_135251209_135251242	0.371401	Homez	ENSMUST00000062572.2|Fzd9|ENSMUSG00000049551.2|frizzled homolog 9 (Drosophila)
mm10_v2_chr12_-_80260356_80260371	0.369379	Homez	ENSMUST00000021554.8|Actn1|ENSMUSG00000015143.8|actinin, alpha 1
mm10_v2_chr7_+_60155538_60155538	0.367355	Homez	ENSMUST00000057611.4|Gm7367|ENSMUSG00000047370.4|predicted pseudogene 7367
mm10_v2_chr8_+_88199194_88199224	0.358943	Homez	ENSMUST00000119033.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000066748.3|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000118952.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5
mm10_v2_chr2_-_93849921_93849980	0.354942	Homez	ENSMUST00000111246.1|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional)
mm10_v2_chr17_+_27839974_27840119	0.349368	Homez	ENSMUST00000071006.7|Snrpc|ENSMUSG00000024217.9|U1 small nuclear ribonucleoprotein C
mm10_v2_chr17_-_25844514_25844565	0.342985	Homez	ENSMUST00000176709.1|Rhot2|ENSMUSG00000025733.11|ras homolog gene family, member T2
mm10_v2_chr1_+_163994866_163994904	0.340486	Homez	ENSMUST00000111490.1|Mettl18|ENSMUSG00000041396.7|methyltransferase like 18 	ENSMUST00000045694.7|Mettl18|ENSMUSG00000041396.7|methyltransferase like 18
mm10_v2_chr12_+_55398775_55398894	0.335708	Homez	ENSMUST00000021412.8|Psma6|ENSMUSG00000021024.8|proteasome (prosome, macropain) subunit, alpha type 6
mm10_v2_chrX_-_41911877_41911912	0.335495	Homez	ENSMUST00000047037.8|Thoc2|ENSMUSG00000037475.9|THO complex 2
mm10_v2_chr7_+_140881898_140881968	0.328771	Homez	ENSMUST00000026560.7|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr8_-_46080284_46080284	0.323404	Homez	ENSMUST00000177186.1|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr5_+_52783055_52783091	0.322069	Homez	ENSMUST00000113904.2|Zcchc4|ENSMUSG00000029179.8|zinc finger, CCHC domain containing 4 	ENSMUST00000031077.8|Zcchc4|ENSMUSG00000029179.8|zinc finger, CCHC domain containing 4
mm10_v2_chr12_-_54695885_54695897	0.32012	Homez	ENSMUST00000067272.8|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chrX_-_37085402_37085402	0.312077	Homez	ENSMUST00000115231.3|Rpl39|ENSMUSG00000079641.3|ribosomal protein L39
mm10_v2_chr7_-_130772652_130772652	0.308587	Homez	ENSMUST00000057134.4|Etos1|ENSMUSG00000050189.4|ectopic ossification 1
mm10_v2_chr7_-_45466894_45466901	0.30643	Homez	ENSMUST00000033093.8|Bax|ENSMUSG00000003873.10|BCL2-associated X protein
mm10_v2_chr10_+_111125851_111125851	0.305792	Homez	ENSMUST00000171120.1|Gm5428|ENSMUSG00000091086.1|predicted gene 5428
mm10_v2_chr1_+_78657874_78658038	0.302067	Homez	ENSMUST00000134566.1|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3 	ENSMUST00000142704.1|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3 	ENSMUST00000053760.5|Utp14b|ENSMUSG00000079470.2|UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)
mm10_v2_chr14_-_103099499_103099554	0.297118	Homez	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chr5_+_8422908_8422988	0.295906	Homez	ENSMUST00000170496.1|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr4_-_40269778_40269850	0.292733	Homez	ENSMUST00000042575.6|Topors|ENSMUSG00000036822.6|topoisomerase I binding, arginine/serine-rich
mm10_v2_chr9_+_55150050_55150083	0.291321	Homez	ENSMUST00000122441.1|Ube2q2|ENSMUSG00000032307.10|ubiquitin-conjugating enzyme E2Q (putative) 2
mm10_v2_chr11_-_48871408_48871424	0.287322	Homez	ENSMUST00000097271.2|Irgm1|ENSMUSG00000046879.6|immunity-related GTPase family M member 1
mm10_v2_chr7_+_127471009_127471036	0.286218	Homez	ENSMUST00000133938.1|Prr14|ENSMUSG00000030822.9|proline rich 14
mm10_v2_chr11_-_48871344_48871407	0.284038	Homez	ENSMUST00000049519.3|Irgm1|ENSMUSG00000046879.6|immunity-related GTPase family M member 1
mm10_v2_chrM_+_10167_10167	0.282003	Homez	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr2_+_85037448_85037530	0.28113	Homez	ENSMUST00000168266.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1 	ENSMUST00000130729.1|Ssrp1|ENSMUSG00000027067.10|structure specific recognition protein 1
mm10_v2_chr12_-_54695813_54695828	0.272959	Homez	ENSMUST00000110713.3|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr15_+_100353149_100353200	0.270708	Homez	ENSMUST00000075675.5|AB099516|ENSMUSG00000093789.1|cDNA sequence AB099516 	ENSMUST00000088142.5|Mettl7a2|ENSMUSG00000056487.8|methyltransferase like 7A2 	ENSMUST00000176287.1|Mettl7a2|ENSMUSG00000056487.8|methyltransferase like 7A2
mm10_v2_chr11_-_103017167_103017179	0.265362	Homez	ENSMUST00000021313.2|Dcakd|ENSMUSG00000020935.2|dephospho-CoA kinase domain containing
mm10_v2_chr8_+_123102344_123102351	0.258468	Homez	ENSMUST00000000756.5|Rpl13|ENSMUSG00000000740.5|ribosomal protein L13
mm10_v2_chr1_+_78657825_78657868	0.251311	Homez	ENSMUST00000035779.8|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3
mm10_v2_chrX_-_139714481_139714507	0.250727	Homez	ENSMUST00000183728.1|Gm15013|ENSMUSG00000098559.1|predicted gene 15013
mm10_v2_chr2_-_3419019_3419061	0.250181	Homez	ENSMUST00000115084.1|Meig1|ENSMUSG00000026650.9|meiosis expressed gene 1 	ENSMUST00000115083.1|Meig1|ENSMUSG00000026650.9|meiosis expressed gene 1
mm10_v2_chr4_-_117682233_117682279	0.241499	Homez	ENSMUST00000102687.3|Dmap1|ENSMUSG00000009640.5|DNA methyltransferase 1-associated protein 1
mm10_v2_chr5_-_149636164_149636190	0.2395	Homez	ENSMUST00000076410.4|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr8_-_107588392_107588482	0.236274	Homez	ENSMUST00000044106.4|Psmd7|ENSMUSG00000039067.4|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm10_v2_chr5_-_149636331_149636376	0.236106	Homez	ENSMUST00000074846.7|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000110498.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000127977.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000132412.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr4_-_6454262_6454330	0.230181	Homez	ENSMUST00000029910.5|Nsmaf|ENSMUSG00000028245.9|neutral sphingomyelinase (N-SMase) activation associated factor
mm10_v2_chrX_-_37878944_37879037	0.228416	Homez	ENSMUST00000071885.6|Rhox8|ENSMUSG00000064137.6|reproductive homeobox 8
mm10_v2_chr6_-_34977999_34977999	0.227338	Homez	ENSMUST00000044387.7|2010107G12Rik|ENSMUSG00000029847.7|RIKEN cDNA 2010107G12 gene
mm10_v2_chr4_+_146654927_146654927	0.224658	Homez	ENSMUST00000070932.3|Gm13248|ENSMUSG00000063245.5|predicted gene 13248
mm10_v2_chr8_-_70506710_70506766	0.22453	Homez	ENSMUST00000136913.1|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene 	ENSMUST00000075175.5|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene
mm10_v2_chr4_-_126429501_126429556	0.213813	Homez	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr2_-_170194033_170194064	0.212125	Homez	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr4_-_141723401_141723436	0.200199	Homez	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr9_+_110132015_110132102	0.198766	Homez	ENSMUST00000088716.5|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111969.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000035057.7|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111966.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111968.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm10_v2_chr8_-_104534630_104534646	0.197698	Homez	ENSMUST00000162466.1|Nae1|ENSMUSG00000031878.11|NEDD8 activating enzyme E1 subunit 1 	ENSMUST00000034349.9|Nae1|ENSMUSG00000031878.11|NEDD8 activating enzyme E1 subunit 1
mm10_v2_chr9_-_21312255_21312333	0.195688	Homez	ENSMUST00000115433.3|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit 	ENSMUST00000003397.7|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit
mm10_v2_chr8_-_72213636_72213636	0.193547	Homez	ENSMUST00000109987.1|Gm11034|ENSMUSG00000079016.1|predicted gene 11034
mm10_v2_chr14_-_20393473_20393572	0.192515	Homez	ENSMUST00000061444.3|Mrps16|ENSMUSG00000049960.3|mitochondrial ribosomal protein S16
mm10_v2_chr15_+_102407144_102407269	0.186642	Homez	ENSMUST00000169619.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr9_-_51102062_51102085	0.181574	Homez	ENSMUST00000170947.1|4833427G06Rik|ENSMUSG00000032057.8|RIKEN cDNA 4833427G06 gene
mm10_v2_chr7_+_140882430_140882472	0.180336	Homez	ENSMUST00000164681.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 	ENSMUST00000163610.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr7_-_46958475_46958527	0.179922	Homez	ENSMUST00000094398.4|Uevld|ENSMUSG00000043262.8|UEV and lactate/malate dehyrogenase domains
mm10_v2_chr13_-_41358990_41359006	0.177871	Homez	ENSMUST00000163623.1|Nedd9|ENSMUSG00000021365.8|neural precursor cell expressed, developmentally down-regulated gene 9
mm10_v2_chr16_-_57606816_57606879	0.170892	Homez	ENSMUST00000114371.3|Cmss1|ENSMUSG00000022748.7|cms small ribosomal subunit 1
mm10_v2_chr6_+_82052307_82052330	0.168974	Homez	ENSMUST00000149023.1|Eva1a|ENSMUSG00000035104.8|eva-1 homolog A (C. elegans)
mm10_v2_chr15_-_98221056_98221056	0.167716	Homez	ENSMUST00000170618.1|Olfr287|ENSMUSG00000090129.2|olfactory receptor 287 	ENSMUST00000141911.1|Olfr287|ENSMUSG00000090129.2|olfactory receptor 287
mm10_v2_chr3_-_54714353_54714353	0.166858	Homez	ENSMUST00000178832.1|Gm21958|ENSMUSG00000094487.1|predicted gene, 21958
mm10_v2_chrX_+_112615301_112615301	0.165249	Homez	ENSMUST00000122805.1|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr6_+_91878034_91878089	0.159705	Homez	ENSMUST00000037783.5|Ccdc174|ENSMUSG00000034083.10|coiled-coil domain containing 174
mm10_v2_chr14_+_56887795_56887795	0.158531	Homez	ENSMUST00000022511.8|Zmym2|ENSMUSG00000021945.8|zinc finger, MYM-type 2
mm10_v2_chr9_+_64173364_64173388	0.155773	Homez	ENSMUST00000034966.7|Rpl4|ENSMUSG00000032399.7|ribosomal protein L4
mm10_v2_chr7_-_13278661_13278721	0.15293	Homez	ENSMUST00000144470.1|6330408A02Rik|ENSMUSG00000070814.8|RIKEN cDNA 6330408A02 gene 	ENSMUST00000119558.1|6330408A02Rik|ENSMUSG00000070814.8|RIKEN cDNA 6330408A02 gene 	ENSMUST00000108532.2|6330408A02Rik|ENSMUSG00000070814.8|RIKEN cDNA 6330408A02 gene
mm10_v2_chr16_+_11203375_11203448	0.152266	Homez	ENSMUST00000181526.1|2610020C07Rik|ENSMUSG00000097537.1|RIKEN cDNA 2610020C07 gene
mm10_v2_chr17_-_24455265_24455345	0.15005	Homez	ENSMUST00000056032.7|E4f1|ENSMUSG00000024137.8|E4F transcription factor 1
mm10_v2_chr5_+_45520221_45520327	0.144063	Homez	ENSMUST00000156481.1|Med28|ENSMUSG00000015804.8|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast) 	ENSMUST00000119579.1|Med28|ENSMUSG00000015804.8|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast) 	ENSMUST00000118833.1|Med28|ENSMUSG00000015804.8|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)
mm10_v2_chr12_-_40248073_40248086	0.143719	Homez	ENSMUST00000169926.1|Ifrd1|ENSMUSG00000001627.5|interferon-related developmental regulator 1
mm10_v2_chr5_+_140419248_140419377	0.143557	Homez	ENSMUST00000100507.3|Eif3b|ENSMUSG00000056076.9|eukaryotic translation initiation factor 3, subunit B
mm10_v2_chrX_-_136743675_136743692	0.135782	Homez	ENSMUST00000166478.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113097.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr2_+_119034783_119034869	0.125396	Homez	ENSMUST00000028796.1|Rpusd2|ENSMUSG00000027324.1|RNA pseudouridylate synthase domain containing 2
mm10_v2_chr2_-_3419066_3419129	0.123329	Homez	ENSMUST00000115082.3|Meig1|ENSMUSG00000026650.9|meiosis expressed gene 1
mm10_v2_chr15_-_79658889_79658956	0.122282	Homez	ENSMUST00000109648.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A 	ENSMUST00000046816.6|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr12_-_115964196_115964196	0.121984	Homez	ENSMUST00000103550.2|Ighv1-83|ENSMUSG00000096466.1|immunoglobulin heavy variable 1-83
mm10_v2_chr2_-_26933781_26933928	0.121658	Homez	ENSMUST00000154651.1|Surf4|ENSMUSG00000014867.3|surfeit gene 4 	ENSMUST00000015011.3|Surf4|ENSMUSG00000014867.3|surfeit gene 4
mm10_v2_chrX_-_7947763_7947776	0.119955	Homez	ENSMUST00000154244.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr15_+_76797628_76797628	0.117501	Homez	ENSMUST00000165535.2|Gm17271|ENSMUSG00000090429.2|predicted gene, 17271
mm10_v2_chrX_+_166238901_166238914	0.116806	Homez	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr13_-_93674300_93674309	0.115488	Homez	ENSMUST00000015941.7|Bhmt2|ENSMUSG00000042118.7|betaine-homocysteine methyltransferase 2
mm10_v2_chr18_-_42262053_42262140	0.111892	Homez	ENSMUST00000097590.3|Lars|ENSMUSG00000024493.8|leucyl-tRNA synthetase
mm10_v2_chr7_-_28598140_28598185	0.106706	Homez	ENSMUST00000040531.8|Samd4b|ENSMUSG00000037513.9|sterile alpha motif domain containing 4B 	ENSMUST00000108283.1|Pak4|ENSMUSG00000030602.6|p21 protein (Cdc42/Rac)-activated kinase 4
mm10_v2_chr13_+_58281183_58281196	0.09829	Homez	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr8_+_13435459_13435503	0.0869383	Homez	ENSMUST00000167071.1|Tmem255b|ENSMUSG00000038457.10|transmembrane protein 255B 	ENSMUST00000167505.1|Tmem255b|ENSMUSG00000038457.10|transmembrane protein 255B
mm10_v2_chr6_+_113393062_113393160	0.085432	Homez	ENSMUST00000138131.2|Ttll3|ENSMUSG00000030276.13|tubulin tyrosine ligase-like family, member 3
mm10_v2_chr12_-_59061425_59061477	0.0794921	Homez	ENSMUST00000021380.8|Trappc6b|ENSMUSG00000020993.8|trafficking protein particle complex 6B
mm10_v2_chr12_-_87775755_87775755	0.0776044	Homez	ENSMUST00000164517.2|Gm21319|ENSMUSG00000095724.1|predicted gene, 21319
mm10_v2_chr9_+_22454290_22454290	0.0740989	Homez	ENSMUST00000168332.1|Gm17545|ENSMUSG00000091159.1|predicted gene, 17545
mm10_v2_chr9_+_57560934_57560989	0.0736988	Homez	ENSMUST00000045791.9|Scamp2|ENSMUSG00000040188.9|secretory carrier membrane protein 2
mm10_v2_chrX_-_57392962_57392988	0.0730172	Homez	ENSMUST00000114730.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr2_+_61711694_61711786	0.0652245	Homez	ENSMUST00000028278.7|Psmd14|ENSMUSG00000026914.9|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
mm10_v2_chr6_-_125231772_125231860	0.0573159	Homez	ENSMUST00000043422.7|Tapbpl|ENSMUSG00000038213.7|TAP binding protein-like
mm10_v2_chr17_-_35162969_35163040	0.0567799	Homez	ENSMUST00000174805.1|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr11_-_58330319_58330358	0.0554443	Homez	ENSMUST00000065533.2|Gm9900|ENSMUSG00000053218.2|predicted gene 9900
mm10_v2_chr6_-_69284319_69284319	0.0503805	Homez	ENSMUST00000103349.1|Igkv4-69|ENSMUSG00000076548.1|immunoglobulin kappa variable 4-69
mm10_v2_chr4_+_132638987_132639118	0.0492848	Homez	ENSMUST00000135299.1|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000081726.6|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000180250.1|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000020197.7|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000079157.4|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila)
mm10_v2_chr5_+_100518309_100518474	0.043838	Homez	ENSMUST00000045993.8|Cops4|ENSMUSG00000035297.8|COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana) 	ENSMUST00000151414.1|Cops4|ENSMUSG00000035297.8|COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana)
mm10_v2_chr4_+_155705088_155705183	0.039364	Homez	ENSMUST00000105595.1|Ssu72|ENSMUSG00000029038.3|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm10_v2_chr2_-_176144697_176144697	0.0392764	Homez	ENSMUST00000178872.1|Gm2004|ENSMUSG00000095648.1|predicted gene 2004
mm10_v2_chr6_+_142413441_142413441	0.0382999	Homez	ENSMUST00000088263.4|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr18_-_43477764_43477836	0.032339	Homez	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr12_-_54695829_54695884	0.0267428	Homez	ENSMUST00000162106.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000160085.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000161592.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000163433.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr13_+_66904914_66904914	0.0211655	Homez	ENSMUST00000168767.2|Gm10767|ENSMUSG00000074826.4|predicted gene 10767
mm10_v2_chr9_+_22475867_22475889	0.0194842	Homez	ENSMUST00000128812.1|Bbs9|ENSMUSG00000035919.10|Bardet-Biedl syndrome 9 (human)
mm10_v2_chr6_+_71373400_71373465	0.0182785	Homez	ENSMUST00000066747.7|Cd8a|ENSMUSG00000053977.7|CD8 antigen, alpha chain 	ENSMUST00000172321.1|Cd8a|ENSMUSG00000053977.7|CD8 antigen, alpha chain
mm10_v2_chr6_+_142414012_142414012	0.013102	Homez	ENSMUST00000141548.1|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr7_-_12818837_12818865	0.00948952	Homez	ENSMUST00000121215.1|Zfp329|ENSMUSG00000057894.10|zinc finger protein 329 	ENSMUST00000108546.1|Zfp329|ENSMUSG00000057894.10|zinc finger protein 329 	ENSMUST00000072222.7|Zfp329|ENSMUSG00000057894.10|zinc finger protein 329
mm10_v2_chr7_+_16175275_16175438	0.00516692	Homez	ENSMUST00000176506.1|Meis3|ENSMUSG00000041420.12|Meis homeobox 3 	ENSMUST00000002495.11|Meis3|ENSMUSG00000041420.12|Meis homeobox 3
mm10_v2_chrX_-_57393020_57393040	0.00337077	Homez	ENSMUST00000143310.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000098470.2|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000114726.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
