mm10_v2_chr8_+_106935720_106935776	5.30453	Hoxa10	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr6_+_34354119_34354151	3.92546	Hoxa10	ENSMUST00000038406.6|Akr1b8|ENSMUSG00000029762.6|aldo-keto reductase family 1, member B8
mm10_v2_chrX_-_43274786_43274786	3.84303	Hoxa10	ENSMUST00000016294.7|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr6_-_56901870_56901891	3.54481	Hoxa10	ENSMUST00000101367.2|Nt5c3|ENSMUSG00000029780.8|5'-nucleotidase, cytosolic III
mm10_v2_chr9_+_53771499_53771535	3.54228	Hoxa10	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr2_-_79908428_79908438	3.47233	Hoxa10	ENSMUST00000102652.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102651.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr3_+_67892189_67892226	3.07895	Hoxa10	ENSMUST00000063263.3|Iqcj|ENSMUSG00000051777.4|IQ motif containing J
mm10_v2_chr1_+_66321708_66321719	2.95611	Hoxa10	ENSMUST00000114013.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr11_-_78984831_78984924	2.8978	Hoxa10	ENSMUST00000073001.4|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9 	ENSMUST00000108269.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr9_-_112232449_112232501	2.86841	Hoxa10	ENSMUST00000035085.5|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr11_-_42000284_42000356	2.56239	Hoxa10	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr2_+_68117713_68117713	2.55215	Hoxa10	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr10_-_11082287_11082372	2.51391	Hoxa10	ENSMUST00000105561.2|Grm1|ENSMUSG00000019828.7|glutamate receptor, metabotropic 1 	ENSMUST00000044306.6|Grm1|ENSMUSG00000019828.7|glutamate receptor, metabotropic 1
mm10_v2_chr2_-_79908389_79908403	2.49942	Hoxa10	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr18_-_89769479_89769558	2.43161	Hoxa10	ENSMUST00000097495.3|Dok6|ENSMUSG00000073514.3|docking protein 6
mm10_v2_chr19_+_43440404_43440447	2.3633	Hoxa10	ENSMUST00000165311.1|Cnnm1|ENSMUSG00000025189.8|cyclin M1
mm10_v2_chr17_-_81649607_81649607	2.35942	Hoxa10	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr11_-_78984946_78984957	2.34635	Hoxa10	ENSMUST00000108268.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr5_-_103100054_103100088	2.3451	Hoxa10	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr15_+_3270767_3271006	2.34236	Hoxa10	ENSMUST00000082424.4|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159158.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159216.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000160311.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1
mm10_v2_chr1_-_140183404_140183415	2.28626	Hoxa10	ENSMUST00000066859.6|Cfh|ENSMUSG00000026365.9|complement component factor h 	ENSMUST00000111976.2|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr8_+_58912257_58912257	2.25319	Hoxa10	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr18_+_37518341_37518359	2.12725	Hoxa10	ENSMUST00000097609.1|Pcdhb22|ENSMUSG00000073591.3|protocadherin beta 22
mm10_v2_chrX_+_56609843_56609864	2.05171	Hoxa10	ENSMUST00000077741.5|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6 	ENSMUST00000114784.2|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm10_v2_chr18_+_37513652_37513652	2.04295	Hoxa10	ENSMUST00000061405.4|Pcdhb21|ENSMUSG00000044022.4|protocadherin beta 21
mm10_v2_chr13_+_109926832_109926881	2.00214	Hoxa10	ENSMUST00000117420.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr1_-_140183283_140183332	1.97203	Hoxa10	ENSMUST00000111977.1|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr10_+_97565436_97565546	1.83779	Hoxa10	ENSMUST00000038160.4|Lum|ENSMUSG00000036446.4|lumican
mm10_v2_chr11_-_69822144_69822180	1.80046	Hoxa10	ENSMUST00000045771.6|Spem1|ENSMUSG00000041165.6|sperm maturation 1
mm10_v2_chr8_-_54718664_54718689	1.71268	Hoxa10	ENSMUST00000144711.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000093510.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr8_+_12984246_12984330	1.69122	Hoxa10	ENSMUST00000110873.3|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like 	ENSMUST00000173006.1|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like 	ENSMUST00000145067.1|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like
mm10_v2_chr5_-_123666682_123666695	1.67629	Hoxa10	ENSMUST00000149410.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chr11_-_110168073_110168196	1.66287	Hoxa10	ENSMUST00000044850.3|Abca9|ENSMUSG00000041797.7|ATP-binding cassette, sub-family A (ABC1), member 9
mm10_v2_chr2_-_37647199_37647285	1.56892	Hoxa10	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr9_+_58582397_58582436	1.49175	Hoxa10	ENSMUST00000176557.1|Nptn|ENSMUSG00000032336.11|neuroplastin 	ENSMUST00000114121.4|Nptn|ENSMUSG00000032336.11|neuroplastin 	ENSMUST00000177064.1|Nptn|ENSMUSG00000032336.11|neuroplastin
mm10_v2_chr13_-_99516537_99516602	1.48382	Hoxa10	ENSMUST00000064762.4|Map1b|ENSMUSG00000052727.5|microtubule-associated protein 1B
mm10_v2_chr8_+_46492789_46492832	1.47881	Hoxa10	ENSMUST00000110371.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr13_-_92030897_92030908	1.45889	Hoxa10	ENSMUST00000149630.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr5_-_118244861_118245116	1.44231	Hoxa10	ENSMUST00000117177.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000133372.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000154786.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000121369.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2
mm10_v2_chr3_+_102010138_102010171	1.42143	Hoxa10	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr11_-_107348130_107348179	1.40479	Hoxa10	ENSMUST00000134763.1|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr3_+_26331150_26331150	1.36052	Hoxa10	ENSMUST00000099182.2|A830092H15Rik|ENSMUSG00000074664.2|RIKEN cDNA A830092H15 gene
mm10_v2_chr4_+_43406435_43406615	1.34817	Hoxa10	ENSMUST00000098106.2|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2 	ENSMUST00000139198.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr4_-_119383732_119383780	1.3213	Hoxa10	ENSMUST00000044781.2|Ccdc30|ENSMUSG00000028637.9|coiled-coil domain containing 30 	ENSMUST00000084307.3|Ccdc30|ENSMUSG00000028637.9|coiled-coil domain containing 30
mm10_v2_chr13_-_74376566_74376566	1.296	Hoxa10	ENSMUST00000091481.2|Zfp72|ENSMUSG00000069184.2|zinc finger protein 72
mm10_v2_chr17_-_6079693_6079760	1.28309	Hoxa10	ENSMUST00000024570.5|Serac1|ENSMUSG00000015659.6|serine active site containing 1 	ENSMUST00000097432.3|Serac1|ENSMUSG00000015659.6|serine active site containing 1
mm10_v2_chr18_+_37411674_37411674	1.28193	Hoxa10	ENSMUST00000051126.2|Pcdhb10|ENSMUSG00000045657.2|protocadherin beta 10
mm10_v2_chr19_+_4711153_4711258	1.15061	Hoxa10	ENSMUST00000008991.6|Sptbn2|ENSMUSG00000067889.4|spectrin beta, non-erythrocytic 2
mm10_v2_chr1_+_74713551_74713574	1.12786	Hoxa10	ENSMUST00000027356.5|Cyp27a1|ENSMUSG00000026170.5|cytochrome P450, family 27, subfamily a, polypeptide 1
mm10_v2_chr4_-_109202217_109202272	1.12508	Hoxa10	ENSMUST00000160774.1|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000030288.7|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000162787.2|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9
mm10_v2_chr17_+_29093763_29093781	1.11873	Hoxa10	ENSMUST00000023829.6|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr3_-_59262825_59262851	1.10729	Hoxa10	ENSMUST00000050360.7|P2ry12|ENSMUSG00000036353.7|purinergic receptor P2Y, G-protein coupled 12
mm10_v2_chr13_-_18031616_18031629	1.10093	Hoxa10	ENSMUST00000099736.2|Vdac3-ps1|ENSMUSG00000075053.2|voltage-dependent anion channel 3, pseudogene 1
mm10_v2_chr3_-_123672321_123672400	1.05273	Hoxa10	ENSMUST00000172537.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 	ENSMUST00000029602.6|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chr13_+_18717289_18717316	1.03975	Hoxa10	ENSMUST00000072961.4|Vps41|ENSMUSG00000041236.7|vacuolar protein sorting 41 (yeast)
mm10_v2_chr9_-_50739365_50739517	1.0391	Hoxa10	ENSMUST00000117093.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000121634.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr10_-_29144194_29144194	1.00663	Hoxa10	ENSMUST00000070359.2|Gm9996|ENSMUSG00000056316.2|predicted gene 9996
mm10_v2_chr11_+_87109221_87109239	0.960773	Hoxa10	ENSMUST00000020794.5|Ska2|ENSMUSG00000020492.5|spindle and kinetochore associated complex subunit 2
mm10_v2_chr11_+_44617310_44617336	0.959394	Hoxa10	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr3_+_136670076_136670186	0.956285	Hoxa10	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr13_+_24614608_24614634	0.953576	Hoxa10	ENSMUST00000091694.3|Fam65b|ENSMUSG00000036006.13|family with sequence similarity 65, member B
mm10_v2_chr19_+_11965817_11965887	0.942751	Hoxa10	ENSMUST00000025590.9|Osbp|ENSMUSG00000024687.10|oxysterol binding protein
mm10_v2_chr17_+_6079786_6079892	0.927637	Hoxa10	ENSMUST00000039487.3|Gtf2h5|ENSMUSG00000034345.8|general transcription factor IIH, polypeptide 5
mm10_v2_chr2_+_83812567_83812643	0.923067	Hoxa10	ENSMUST00000051454.3|Fam171b|ENSMUSG00000048388.3|family with sequence similarity 171, member B
mm10_v2_chr2_+_4300462_4300522	0.915963	Hoxa10	ENSMUST00000175669.1|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr18_+_37496997_37496997	0.90677	Hoxa10	ENSMUST00000059571.5|Pcdhb19|ENSMUSG00000043313.5|protocadherin beta 19
mm10_v2_chr13_-_60897439_60897455	0.85647	Hoxa10	ENSMUST00000171347.1|Ctla2b|ENSMUSG00000074874.3|cytotoxic T lymphocyte-associated protein 2 beta 	ENSMUST00000021884.8|Ctla2b|ENSMUSG00000074874.3|cytotoxic T lymphocyte-associated protein 2 beta
mm10_v2_chr2_+_102658640_102658669	0.844007	Hoxa10	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr6_-_99028874_99028942	0.832428	Hoxa10	ENSMUST00000154163.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr16_-_35871544_35871544	0.824345	Hoxa10	ENSMUST00000042665.8|Parp14|ENSMUSG00000034422.8|poly (ADP-ribose) polymerase family, member 14
mm10_v2_chr6_-_122856151_122856163	0.801774	Hoxa10	ENSMUST00000042081.8|C3ar1|ENSMUSG00000040552.8|complement component 3a receptor 1
mm10_v2_chr18_-_12860197_12860251	0.790401	Hoxa10	ENSMUST00000124570.1|Osbpl1a|ENSMUSG00000044252.11|oxysterol binding protein-like 1A
mm10_v2_chr5_+_121777929_121777929	0.779855	Hoxa10	ENSMUST00000160821.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr2_-_114201416_114201469	0.774049	Hoxa10	ENSMUST00000050668.3|Zfp770|ENSMUSG00000040321.3|zinc finger protein 770
mm10_v2_chr3_-_94436574_94436616	0.768248	Hoxa10	ENSMUST00000029787.4|Oaz3|ENSMUSG00000028141.4|ornithine decarboxylase antizyme 3
mm10_v2_chrX_-_136741155_136741352	0.761299	Hoxa10	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr2_-_73625731_73625744	0.723663	Hoxa10	ENSMUST00000070579.6|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr6_+_54264839_54264863	0.713006	Hoxa10	ENSMUST00000146114.1|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr1_+_179961110_179961110	0.688476	Hoxa10	ENSMUST00000076687.5|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000097450.3|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr8_+_93810832_93810843	0.679647	Hoxa10	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr12_+_10390756_10390836	0.672794	Hoxa10	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr17_-_33760451_33760530	0.662765	Hoxa10	ENSMUST00000057373.7|Rab11b|ENSMUSG00000077450.6|RAB11B, member RAS oncogene family
mm10_v2_chr2_-_34755229_34755252	0.650525	Hoxa10	ENSMUST00000102800.1|Gapvd1|ENSMUSG00000026867.12|GTPase activating protein and VPS9 domains 1
mm10_v2_chr17_+_6079928_6079939	0.618951	Hoxa10	ENSMUST00000100955.2|Gtf2h5|ENSMUSG00000034345.8|general transcription factor IIH, polypeptide 5
mm10_v2_chr1_+_193173469_193173595	0.615897	Hoxa10	ENSMUST00000161235.1|A130010J15Rik|ENSMUSG00000079144.6|RIKEN cDNA A130010J15 gene 	ENSMUST00000110831.2|A130010J15Rik|ENSMUSG00000079144.6|RIKEN cDNA A130010J15 gene 	ENSMUST00000178744.1|A130010J15Rik|ENSMUSG00000079144.6|RIKEN cDNA A130010J15 gene
mm10_v2_chr1_+_127729405_127729418	0.611124	Hoxa10	ENSMUST00000038006.6|Acmsd|ENSMUSG00000026348.6|amino carboxymuconate semialdehyde decarboxylase
mm10_v2_chr7_-_126160992_126161013	0.609469	Hoxa10	ENSMUST00000164741.1|Xpo6|ENSMUSG00000000131.9|exportin 6
mm10_v2_chr2_-_34826187_34826240	0.599692	Hoxa10	ENSMUST00000113075.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000113080.2|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000091020.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chrX_+_112604274_112604274	0.586319	Hoxa10	ENSMUST00000071814.6|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr2_+_164823001_164823040	0.57126	Hoxa10	ENSMUST00000132282.1|Zswim1|ENSMUSG00000017764.2|zinc finger SWIM-type containing 1
mm10_v2_chr6_-_99044414_99044459	0.564772	Hoxa10	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr18_-_23038656_23038676	0.553453	Hoxa10	ENSMUST00000081423.6|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr8_-_33747724_33747781	0.539811	Hoxa10	ENSMUST00000179364.1|Smim18|ENSMUSG00000094500.1|small integral membrane protein 18
mm10_v2_chr10_+_29143996_29144126	0.523689	Hoxa10	ENSMUST00000092629.2|Soga3|ENSMUSG00000038916.6|SOGA family member 3
mm10_v2_chr8_-_41054771_41054802	0.516729	Hoxa10	ENSMUST00000093534.4|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr1_-_156939626_156939657	0.506779	Hoxa10	ENSMUST00000063199.6|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000027886.7|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000172057.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr12_+_55089202_55089202	0.485811	Hoxa10	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr18_+_33464163_33464163	0.482157	Hoxa10	ENSMUST00000097634.3|Gm10549|ENSMUSG00000073610.3|predicted gene 10549
mm10_v2_chr7_-_25882407_25882407	0.475562	Hoxa10	ENSMUST00000163316.2|Gm6434|ENSMUSG00000091233.2|predicted gene 6434
mm10_v2_chrM_+_14138_14154	0.462297	Hoxa10	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chr1_-_89933290_89933290	0.453548	Hoxa10	ENSMUST00000036954.7|Gbx2|ENSMUSG00000034486.7|gastrulation brain homeobox 2
mm10_v2_chr6_+_6955993_6956049	0.450792	Hoxa10	ENSMUST00000040826.5|Acn9|ENSMUSG00000042505.6|ACN9 homolog (S. cerevisiae)
mm10_v2_chr8_-_105565985_105566071	0.448739	Hoxa10	ENSMUST00000013304.7|Atp6v0d1|ENSMUSG00000013160.7|ATPase, H+ transporting, lysosomal V0 subunit D1
mm10_v2_chrM_+_3906_3926	0.439916	Hoxa10	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr8_+_46986913_46986962	0.434545	Hoxa10	ENSMUST00000039840.7|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6 	ENSMUST00000119686.1|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm10_v2_chr4_+_42629719_42629719	0.429816	Hoxa10	ENSMUST00000166898.2|Gm2564|ENSMUSG00000091938.2|predicted gene 2564
mm10_v2_chr5_+_105415738_105415849	0.429695	Hoxa10	ENSMUST00000112707.1|Lrrc8b|ENSMUSG00000070639.4|leucine rich repeat containing 8 family, member B
mm10_v2_chr1_-_125913101_125913118	0.428256	Hoxa10	ENSMUST00000161361.1|Lypd1|ENSMUSG00000026344.3|Ly6/Plaur domain containing 1
mm10_v2_chr18_-_43477764_43477836	0.423047	Hoxa10	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr10_-_29362012_29362029	0.418986	Hoxa10	ENSMUST00000161508.1|Rnf146|ENSMUSG00000038876.5|ring finger protein 146
mm10_v2_chr7_+_29238434_29238456	0.401431	Hoxa10	ENSMUST00000108237.1|Yif1b|ENSMUSG00000030588.5|Yip1 interacting factor homolog B (S. cerevisiae)
mm10_v2_chr17_+_33824591_33824644	0.384068	Hoxa10	ENSMUST00000048249.6|Ndufa7|ENSMUSG00000041881.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)
mm10_v2_chr1_-_156718894_156718935	0.372117	Hoxa10	ENSMUST00000086153.6|Fam20b|ENSMUSG00000033557.11|family with sequence similarity 20, member B
mm10_v2_chr1_+_167618246_167618309	0.351968	Hoxa10	ENSMUST00000111380.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr3_-_57301919_57301956	0.349474	Hoxa10	ENSMUST00000029376.8|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr2_-_34826071_34826087	0.344251	Hoxa10	ENSMUST00000113077.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000028220.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr8_+_83666827_83666882	0.331901	Hoxa10	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr8_+_85432686_85432686	0.32041	Hoxa10	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr1_+_59684949_59685023	0.308338	Hoxa10	ENSMUST00000027174.3|Nop58|ENSMUSG00000026020.3|NOP58 ribonucleoprotein
mm10_v2_chr6_+_127453667_127453685	0.300687	Hoxa10	ENSMUST00000112193.1|Parp11|ENSMUSG00000037997.6|poly (ADP-ribose) polymerase family, member 11
mm10_v2_chr1_+_179960472_179960585	0.300295	Hoxa10	ENSMUST00000097453.2|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000111117.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr18_-_3281712_3281747	0.2939	Hoxa10	ENSMUST00000182204.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000154705.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000182833.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000151084.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr12_+_55239326_55239326	0.291943	Hoxa10	ENSMUST00000164243.1|Srp54c|ENSMUSG00000021020.9|signal recognition particle 54C
mm10_v2_chr1_-_156718989_156719021	0.282126	Hoxa10	ENSMUST00000122424.1|Fam20b|ENSMUSG00000033557.11|family with sequence similarity 20, member B
mm10_v2_chr10_-_116549101_116549163	0.281338	Hoxa10	ENSMUST00000164088.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr17_-_15566421_15566421	0.279241	Hoxa10	ENSMUST00000178455.1|Gm6686|ENSMUSG00000095920.1|predicted pseudogene 6686
mm10_v2_chr19_+_24875679_24875689	0.265181	Hoxa10	ENSMUST00000073080.5|Gm10053|ENSMUSG00000058927.5|predicted gene 10053
mm10_v2_chr5_+_121749196_121749196	0.263871	Hoxa10	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr6_+_59208870_59208958	0.238441	Hoxa10	ENSMUST00000062626.3|Tigd2|ENSMUSG00000049232.3|tigger transposable element derived 2
mm10_v2_chr16_+_48872608_48872626	0.206162	Hoxa10	ENSMUST00000065666.4|Retnlg|ENSMUSG00000022651.5|resistin like gamma
mm10_v2_chr11_+_3330401_3330541	0.199007	Hoxa10	ENSMUST00000045153.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr8_+_110618577_110618638	0.196407	Hoxa10	ENSMUST00000034190.9|Vac14|ENSMUSG00000010936.10|Vac14 homolog (S. cerevisiae)
mm10_v2_chr7_+_29238323_29238394	0.191458	Hoxa10	ENSMUST00000108238.1|Yif1b|ENSMUSG00000030588.5|Yip1 interacting factor homolog B (S. cerevisiae) 	ENSMUST00000032809.3|Yif1b|ENSMUSG00000030588.5|Yip1 interacting factor homolog B (S. cerevisiae) 	ENSMUST00000138128.1|Yif1b|ENSMUSG00000030588.5|Yip1 interacting factor homolog B (S. cerevisiae)
mm10_v2_chr5_-_131616599_131616611	0.185244	Hoxa10	ENSMUST00000161804.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr4_-_91376433_91376477	0.17414	Hoxa10	ENSMUST00000107109.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107111.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107120.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr5_+_24394388_24394430	0.144293	Hoxa10	ENSMUST00000115074.1|Abcb8|ENSMUSG00000028973.12|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm10_v2_chr6_+_36388055_36388084	0.133689	Hoxa10	ENSMUST00000172278.1|Chrm2|ENSMUSG00000045613.3|cholinergic receptor, muscarinic 2, cardiac
mm10_v2_chr7_-_73537621_73537766	0.122527	Hoxa10	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr9_+_55326913_55326958	0.114056	Hoxa10	ENSMUST00000085754.3|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078 	ENSMUST00000034862.4|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078
mm10_v2_chr6_-_24528013_24528034	0.105069	Hoxa10	ENSMUST00000023851.5|Ndufa5|ENSMUSG00000023089.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm10_v2_chr9_-_46319984_46319990	0.103436	Hoxa10	ENSMUST00000159565.1|4931429L15Rik|ENSMUSG00000056617.6|RIKEN cDNA 4931429L15 gene
mm10_v2_chr18_-_34651703_34651741	0.101944	Hoxa10	ENSMUST00000025228.5|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23 	ENSMUST00000133181.1|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23
mm10_v2_chr2_+_15049395_15049447	0.0872923	Hoxa10	ENSMUST00000017562.6|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr5_+_121802230_121802230	0.0698148	Hoxa10	ENSMUST00000162995.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr13_-_90089060_90089092	0.0656822	Hoxa10	ENSMUST00000161396.1|Xrcc4|ENSMUSG00000021615.7|X-ray repair complementing defective repair in Chinese hamster cells 4
mm10_v2_chr1_+_72583245_72583282	0.0650756	Hoxa10	ENSMUST00000145868.1|Smarcal1|ENSMUSG00000039354.10|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENSMUST00000133123.1|Smarcal1|ENSMUSG00000039354.10|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENSMUST00000047615.8|Smarcal1|ENSMUSG00000039354.10|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
mm10_v2_chr10_-_111997204_111997279	0.0557508	Hoxa10	ENSMUST00000074805.5|Glipr1|ENSMUSG00000056888.5|GLI pathogenesis-related 1 (glioma)
mm10_v2_chr12_+_84361968_84362018	0.0547132	Hoxa10	ENSMUST00000021661.6|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr9_-_96478660_96478675	0.0475037	Hoxa10	ENSMUST00000057500.4|Rnf7|ENSMUSG00000051234.5|ring finger protein 7
mm10_v2_chr15_-_54919961_54920037	0.0420673	Hoxa10	ENSMUST00000167541.2|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000041591.9|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000173516.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr15_+_85510812_85510812	0.0417496	Hoxa10	ENSMUST00000079690.2|Gm4825|ENSMUSG00000063548.2|predicted pseudogene 4825
mm10_v2_chr1_+_153874335_153874354	0.0374417	Hoxa10	ENSMUST00000055314.3|Gm5531|ENSMUSG00000043282.3|predicted gene 5531
mm10_v2_chr18_-_35740499_35740554	0.0283371	Hoxa10	ENSMUST00000115728.3|Tmem173|ENSMUSG00000024349.9|transmembrane protein 173
mm10_v2_chr19_-_45591820_45591878	0.0143937	Hoxa10	ENSMUST00000160003.1|Fbxw4|ENSMUSG00000040913.4|F-box and WD-40 domain protein 4 	ENSMUST00000162879.1|Fbxw4|ENSMUSG00000040913.4|F-box and WD-40 domain protein 4
mm10_v2_chr11_+_87582201_87582215	0.00694571	Hoxa10	ENSMUST00000133202.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr4_+_115057683_115057811	0.00606782	Hoxa10	ENSMUST00000161601.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr2_+_69790968_69790973	0.005659	Hoxa10	ENSMUST00000180290.1|Phospho2|ENSMUSG00000027088.4|phosphatase, orphan 2
mm10_v2_chr1_+_182124737_182124800	0.00415971	Hoxa10	ENSMUST00000111018.1|Srp9|ENSMUSG00000026511.6|signal recognition particle 9 	ENSMUST00000027792.5|Srp9|ENSMUSG00000026511.6|signal recognition particle 9
mm10_v2_chr13_+_58281183_58281196	6.59487e-05	Hoxa10	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
