mm10_v2_chr9_-_98032983_98033122	19.8163	Mafa	ENSMUST00000162295.1|Clstn2|ENSMUSG00000032452.6|calsyntenin 2
mm10_v2_chr9_-_98033181_98033207	17.6242	Mafa	ENSMUST00000035027.6|Clstn2|ENSMUSG00000032452.6|calsyntenin 2
mm10_v2_chr14_+_119138415_119138415	15.4135	Mafa	ENSMUST00000065904.3|Hs6st3|ENSMUSG00000053465.5|heparan sulfate 6-O-sulfotransferase 3
mm10_v2_chr1_-_169747634_169747649	14.4487	Mafa	ENSMUST00000027991.5|Rgs4|ENSMUSG00000038530.5|regulator of G-protein signaling 4 	ENSMUST00000111357.1|Rgs4|ENSMUSG00000038530.5|regulator of G-protein signaling 4
mm10_v2_chr16_-_17576631_17576721	12.798	Mafa	ENSMUST00000164545.1|Slc7a4|ENSMUSG00000022756.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 	ENSMUST00000164490.1|Slc7a4|ENSMUSG00000022756.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 	ENSMUST00000172164.1|Slc7a4|ENSMUSG00000022756.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
mm10_v2_chr1_-_136260873_136260931	12.5532	Mafa	ENSMUST00000086395.5|Gpr25|ENSMUSG00000052759.6|G protein-coupled receptor 25
mm10_v2_chr4_+_102254993_102255003	11.672	Mafa	ENSMUST00000106908.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr4_+_102254739_102254761	11.2107	Mafa	ENSMUST00000106907.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr7_+_54835959_54835959	10.8303	Mafa	ENSMUST00000082373.6|Luzp2|ENSMUSG00000063297.6|leucine zipper protein 2
mm10_v2_chr1_-_38836090_38836090	7.8858	Mafa	ENSMUST00000147695.1|Lonrf2|ENSMUSG00000048814.4|LON peptidase N-terminal domain and ring finger 2
mm10_v2_chr8_-_70487314_70487381	7.70784	Mafa	ENSMUST00000045286.7|Tmem59l|ENSMUSG00000035964.7|transmembrane protein 59-like
mm10_v2_chr11_-_66525964_66525964	6.84222	Mafa	ENSMUST00000066679.6|Shisa6|ENSMUSG00000053930.7|shisa homolog 6 (Xenopus laevis)
mm10_v2_chr11_-_66525795_66525795	6.67463	Mafa	ENSMUST00000123454.1|Shisa6|ENSMUSG00000053930.7|shisa homolog 6 (Xenopus laevis)
mm10_v2_chr10_+_58813359_58813458	6.46736	Mafa	ENSMUST00000135526.2|Sh3rf3|ENSMUSG00000037990.12|SH3 domain containing ring finger 3 	ENSMUST00000153031.1|Sh3rf3|ENSMUSG00000037990.12|SH3 domain containing ring finger 3
mm10_v2_chrX_-_73869804_73869905	6.3833	Mafa	ENSMUST00000066576.5|L1cam|ENSMUSG00000031391.12|L1 cell adhesion molecule 	ENSMUST00000114430.1|L1cam|ENSMUSG00000031391.12|L1 cell adhesion molecule
mm10_v2_chr12_+_3365108_3365142	5.70404	Mafa	ENSMUST00000020999.5|Kif3c|ENSMUSG00000020668.9|kinesin family member 3C
mm10_v2_chr5_-_142509653_142509664	5.66087	Mafa	ENSMUST00000110784.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr16_-_74411292_74411430	5.21893	Mafa	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr16_-_74411776_74411792	5.10409	Mafa	ENSMUST00000116586.2|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr19_+_27217011_27217042	5.08119	Mafa	ENSMUST00000164746.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000172302.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr19_+_27217357_27217424	4.94524	Mafa	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr6_-_35308110_35308136	4.50387	Mafa	ENSMUST00000031868.4|Slc13a4|ENSMUSG00000029843.4|solute carrier family 13 (sodium/sulfate symporters), member 4
mm10_v2_chr16_+_91269759_91269778	4.47757	Mafa	ENSMUST00000056882.5|Olig1|ENSMUSG00000046160.5|oligodendrocyte transcription factor 1
mm10_v2_chr18_-_36197343_36197403	4.34857	Mafa	ENSMUST00000115713.1|Nrg2|ENSMUSG00000060275.5|neuregulin 2 	ENSMUST00000115712.1|Nrg2|ENSMUSG00000060275.5|neuregulin 2
mm10_v2_chr10_-_84440591_84440604	4.33109	Mafa	ENSMUST00000020220.8|Nuak1|ENSMUSG00000020032.8|NUAK family, SNF1-like kinase, 1
mm10_v2_chr12_-_86884808_86884842	4.22423	Mafa	ENSMUST00000038422.6|Irf2bpl|ENSMUSG00000034168.6|interferon regulatory factor 2 binding protein-like
mm10_v2_chr5_+_111417263_111417442	4.18543	Mafa	ENSMUST00000094463.4|Mn1|ENSMUSG00000070576.4|meningioma 1
mm10_v2_chr4_+_43406435_43406615	4.14261	Mafa	ENSMUST00000098106.2|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2 	ENSMUST00000139198.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr5_-_124187150_124187225	4.13304	Mafa	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr4_+_21931291_21931366	3.82647	Mafa	ENSMUST00000029908.7|Faxc|ENSMUSG00000028246.7|failed axon connections homolog (Drosophila)
mm10_v2_chr13_+_4233730_4233758	3.81763	Mafa	ENSMUST00000081326.6|Akr1c19|ENSMUSG00000071551.6|aldo-keto reductase family 1, member C19
mm10_v2_chr4_+_42035113_42035113	3.81709	Mafa	ENSMUST00000098127.1|Gm10597|ENSMUSG00000095611.1|predicted gene 10597
mm10_v2_chr12_+_105453831_105453919	3.68749	Mafa	ENSMUST00000178224.1|D430019H16Rik|ENSMUSG00000094910.1|RIKEN cDNA D430019H16 gene
mm10_v2_chrX_-_95444789_95444872	3.59324	Mafa	ENSMUST00000084535.5|Amer1|ENSMUSG00000050332.7|APC membrane recruitment 1
mm10_v2_chr17_-_47010513_47010568	3.3431	Mafa	ENSMUST00000113337.2|Ubr2|ENSMUSG00000023977.8|ubiquitin protein ligase E3 component n-recognin 2 	ENSMUST00000113335.2|Ubr2|ENSMUSG00000023977.8|ubiquitin protein ligase E3 component n-recognin 2
mm10_v2_chr9_-_105131775_105131833	3.21802	Mafa	ENSMUST00000035179.6|Nudt16|ENSMUSG00000032565.7|nudix (nucleoside diphosphate linked moiety X)-type motif 16
mm10_v2_chrX_+_152178945_152178964	3.06603	Mafa	ENSMUST00000096275.4|Iqsec2|ENSMUSG00000041115.10|IQ motif and Sec7 domain 2
mm10_v2_chrX_-_20950597_20950613	2.917	Mafa	ENSMUST00000009550.7|Elk1|ENSMUSG00000009406.7|ELK1, member of ETS oncogene family
mm10_v2_chr2_-_125506385_125506408	2.86081	Mafa	ENSMUST00000028633.6|Fbn1|ENSMUSG00000027204.7|fibrillin 1
mm10_v2_chr8_+_93810832_93810843	2.81991	Mafa	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr9_-_51077064_51077100	2.75023	Mafa	ENSMUST00000098782.3|Layn|ENSMUSG00000060594.5|layilin
mm10_v2_chr11_-_107337556_107337637	2.67399	Mafa	ENSMUST00000040380.6|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr10_-_75932468_75932502	2.46776	Mafa	ENSMUST00000120281.1|Mmp11|ENSMUSG00000000901.9|matrix metallopeptidase 11 	ENSMUST00000000924.6|Mmp11|ENSMUSG00000000901.9|matrix metallopeptidase 11
mm10_v2_chr4_-_35845204_35845204	2.3964	Mafa	ENSMUST00000164772.1|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2 	ENSMUST00000065173.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr14_+_64588112_64588120	2.37523	Mafa	ENSMUST00000181808.1|A930011O12Rik|ENSMUSG00000097545.1|RIKEN cDNA A930011O12 gene
mm10_v2_chr11_+_87595646_87595659	2.27576	Mafa	ENSMUST00000134216.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr17_-_46752170_46752231	2.22192	Mafa	ENSMUST00000121671.1|Cnpy3|ENSMUSG00000023973.7|canopy 3 homolog (zebrafish) 	ENSMUST00000059844.6|Cnpy3|ENSMUSG00000023973.7|canopy 3 homolog (zebrafish)
mm10_v2_chr1_-_121328024_121328044	2.12836	Mafa	ENSMUST00000003818.7|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr5_+_24423805_24423848	2.07161	Mafa	ENSMUST00000153274.1|Slc4a2|ENSMUSG00000028962.8|solute carrier family 4 (anion exchanger), member 2
mm10_v2_chr8_-_84937347_84937367	2.00257	Mafa	ENSMUST00000109741.2|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1 	ENSMUST00000119820.1|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1
mm10_v2_chr4_-_59138983_59138983	1.93508	Mafa	ENSMUST00000107547.1|AI481877|ENSMUSG00000038598.9|expressed sequence AI481877
mm10_v2_chr7_-_67759735_67759759	1.91131	Mafa	ENSMUST00000074233.4|Synm|ENSMUSG00000030554.9|synemin, intermediate filament protein 	ENSMUST00000051389.8|Synm|ENSMUSG00000030554.9|synemin, intermediate filament protein
mm10_v2_chr1_-_121327776_121327803	1.84551	Mafa	ENSMUST00000160688.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr9_+_108002501_108002680	1.82337	Mafa	ENSMUST00000035214.4|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1 	ENSMUST00000175874.1|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1
mm10_v2_chr1_-_121327734_121327768	1.69324	Mafa	ENSMUST00000160968.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2 	ENSMUST00000162582.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr4_+_59003121_59003215	1.61945	Mafa	ENSMUST00000095070.3|Dnajc25|ENSMUSG00000070972.7|DnaJ (Hsp40) homolog, subfamily C, member 25 	ENSMUST00000174664.1|Gm20503|ENSMUSG00000092345.1|predicted gene 20503
mm10_v2_chr7_+_140856957_140856957	1.56898	Mafa	ENSMUST00000026558.6|Ric8|ENSMUSG00000025485.6|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)
mm10_v2_chr11_-_119228461_119228504	1.50301	Mafa	ENSMUST00000036113.3|Tbc1d16|ENSMUSG00000039976.3|TBC1 domain family, member 16
mm10_v2_chr1_-_121327672_121327690	1.45939	Mafa	ENSMUST00000159085.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2 	ENSMUST00000159125.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2 	ENSMUST00000161818.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr8_-_105565985_105566071	1.39623	Mafa	ENSMUST00000013304.7|Atp6v0d1|ENSMUSG00000013160.7|ATPase, H+ transporting, lysosomal V0 subunit D1
mm10_v2_chr15_-_25413752_25413773	1.35743	Mafa	ENSMUST00000058845.7|Basp1|ENSMUSG00000045763.7|brain abundant, membrane attached signal protein 1
mm10_v2_chr9_-_45906837_45906894	1.20734	Mafa	ENSMUST00000161203.1|Rnf214|ENSMUSG00000042790.9|ring finger protein 214 	ENSMUST00000058720.5|Rnf214|ENSMUSG00000042790.9|ring finger protein 214 	ENSMUST00000160699.1|Rnf214|ENSMUSG00000042790.9|ring finger protein 214
mm10_v2_chr17_-_47611449_47611544	1.14802	Mafa	ENSMUST00000024783.8|Bysl|ENSMUSG00000023988.8|bystin-like
mm10_v2_chr1_-_105356658_105356714	1.1475	Mafa	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chr10_-_81600857_81600900	1.12588	Mafa	ENSMUST00000151858.1|Tle6|ENSMUSG00000034758.6|transducin-like enhancer of split 6, homolog of Drosophila E(spl) 	ENSMUST00000142948.1|Tle6|ENSMUSG00000034758.6|transducin-like enhancer of split 6, homolog of Drosophila E(spl) 	ENSMUST00000072020.2|Tle6|ENSMUSG00000034758.6|transducin-like enhancer of split 6, homolog of Drosophila E(spl)
mm10_v2_chr13_+_93771656_93771702	1.08693	Mafa	ENSMUST00000091403.4|Arsb|ENSMUSG00000042082.6|arylsulfatase B
mm10_v2_chr9_-_109059711_109059771	0.926007	Mafa	ENSMUST00000061973.4|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr4_+_155601854_155601944	0.839408	Mafa	ENSMUST00000118607.1|Slc35e2|ENSMUSG00000042202.9|solute carrier family 35, member E2
mm10_v2_chrX_+_151047170_151047227	0.815428	Mafa	ENSMUST00000026296.7|Fgd1|ENSMUSG00000025265.8|FYVE, RhoGEF and PH domain containing 1
mm10_v2_chrX_-_122397351_122397425	0.810692	Mafa	ENSMUST00000079490.4|Nap1l3|ENSMUSG00000055733.5|nucleosome assembly protein 1-like 3
mm10_v2_chr11_+_50174839_50174884	0.797448	Mafa	ENSMUST00000020647.3|3010026O09Rik|ENSMUSG00000020381.4|RIKEN cDNA 3010026O09 gene
mm10_v2_chr9_-_48835932_48835962	0.793541	Mafa	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chr8_+_60993189_60993247	0.747318	Mafa	ENSMUST00000034065.7|Nek1|ENSMUSG00000031644.12|NIMA (never in mitosis gene a)-related expressed kinase 1 	ENSMUST00000120689.1|Nek1|ENSMUSG00000031644.12|NIMA (never in mitosis gene a)-related expressed kinase 1
mm10_v2_chr5_-_24423516_24423538	0.735249	Mafa	ENSMUST00000030814.6|Cdk5|ENSMUSG00000028969.6|cyclin-dependent kinase 5
mm10_v2_chr9_-_109059216_109059259	0.647813	Mafa	ENSMUST00000112053.1|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr10_-_62507737_62507764	0.634392	Mafa	ENSMUST00000020271.6|Srgn|ENSMUSG00000020077.8|serglycin
mm10_v2_chr1_+_87183310_87183316	0.483375	Mafa	ENSMUST00000044533.8|Prss56|ENSMUSG00000036480.9|protease, serine 56
mm10_v2_chr17_+_47611570_47611619	0.480763	Mafa	ENSMUST00000024778.2|Med20|ENSMUSG00000092558.3|mediator complex subunit 20
mm10_v2_chr1_+_146495621_146495636	0.33728	Mafa	ENSMUST00000074622.4|Brinp3|ENSMUSG00000035131.8|bone morphogenetic protein/retinoic acid inducible neural specific 3
mm10_v2_chrX_+_104482774_104482858	0.329301	Mafa	ENSMUST00000087867.5|Uprt|ENSMUSG00000073016.3|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
mm10_v2_chr2_+_36230426_36230491	0.306151	Mafa	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chrX_-_97377150_97377187	0.242446	Mafa	ENSMUST00000113832.1|Eda2r|ENSMUSG00000034457.4|ectodysplasin A2 receptor
mm10_v2_chr5_+_124629050_124629097	0.167341	Mafa	ENSMUST00000037865.8|Atp6v0a2|ENSMUSG00000038023.8|ATPase, H+ transporting, lysosomal V0 subunit A2
mm10_v2_chr9_-_65580040_65580061	0.165606	Mafa	ENSMUST00000068944.7|Plekho2|ENSMUSG00000050721.8|pleckstrin homology domain containing, family O member 2
mm10_v2_chr13_+_96924674_96924694	0.135591	Mafa	ENSMUST00000171324.1|Gcnt4|ENSMUSG00000091387.1|glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
mm10_v2_chr9_+_45906513_45906569	0.0748742	Mafa	ENSMUST00000039059.6|Pcsk7|ENSMUSG00000035382.8|proprotein convertase subtilisin/kexin type 7
