mm10_v2_chr5_-_134747241_134747264	8.81996	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000015138.9|Eln|ENSMUSG00000029675.9|elastin
mm10_v2_chr3_-_49757257_49757316	6.31783	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr2_+_116067213_116067250	6.27745	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000152412.1|G630016G05Rik|ENSMUSG00000086308.1|RIKEN cDNA G630016G05 gene
mm10_v2_chr14_-_118052235_118052253	5.74938	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000022725.2|Dct|ENSMUSG00000022129.3|dopachrome tautomerase
mm10_v2_chr16_+_42907563_42907684	5.05663	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr5_-_62766153_62766246	4.81487	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr2_-_116067391_116067444	4.33654	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr11_-_98053415_98053467	3.75859	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000017544.2|Stac2|ENSMUSG00000017400.4|SH3 and cysteine rich domain 2
mm10_v2_chr9_-_40346290_40346337	3.28563	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000121357.1|Gramd1b|ENSMUSG00000040111.8|GRAM domain containing 1B
mm10_v2_chr1_+_104768510_104768529	3.26886	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000062528.8|Cdh20|ENSMUSG00000050840.8|cadherin 20
mm10_v2_chr3_+_66219909_66219927	3.21249	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000029421.5|Ptx3|ENSMUSG00000027832.5|pentraxin related gene
mm10_v2_chr12_-_83487708_83487729	2.90899	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000177959.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3 	ENSMUST00000178756.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr9_+_118478344_118478451	2.84138	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000035020.8|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr19_+_26749726_26749877	2.54035	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000175842.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr16_+_45093611_45093622	2.49921	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000099498.2|Ccdc80|ENSMUSG00000022665.8|coiled-coil domain containing 80
mm10_v2_chr16_-_37384915_37384931	2.47751	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114787.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114782.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000023526.2|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114775.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr2_-_77703252_77703272	2.43	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000171063.1|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr13_+_44121167_44121322	2.42421	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000163056.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083 	ENSMUST00000159595.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083
mm10_v2_chr17_-_49564262_49564337	2.41431	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000057610.6|Daam2|ENSMUSG00000040260.7|dishevelled associated activator of morphogenesis 2
mm10_v2_chr9_+_118478182_118478212	2.29227	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000111763.1|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr1_-_190170671_190170744	1.94519	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr3_+_86070915_86070915	1.83525	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr16_-_37384940_37384978	1.69628	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114781.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114780.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr15_+_25773985_25774042	1.61016	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000125667.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr1_-_155417394_155417435	1.54199	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr18_+_57468478_57468541	1.53861	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000091892.2|Ctxn3|ENSMUSG00000069372.2|cortexin 3
mm10_v2_chr2_+_22622183_22622205	1.47909	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000028123.3|Gad2|ENSMUSG00000026787.3|glutamic acid decarboxylase 2
mm10_v2_chr5_-_62765618_62765656	1.46654	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr15_-_8710734_8710764	1.45183	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr18_-_37969742_37969782	1.35496	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000166148.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000163131.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000043437.7|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1
mm10_v2_chr5_-_123141067_123141094	1.34591	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000162697.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000160321.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000159637.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr10_+_99263224_99263240	1.31055	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000020118.4|Dusp6|ENSMUSG00000019960.7|dual specificity phosphatase 6
mm10_v2_chr6_+_125552948_125552980	1.2694	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr5_+_34999111_34999184	1.21573	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114283.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr15_-_8710409_8710498	1.1149	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000157065.1|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr2_+_71528657_71528683	1.08846	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000126400.1|Dlx1|ENSMUSG00000041911.3|distal-less homeobox 1
mm10_v2_chr3_+_68572245_68572392	1.08782	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr17_+_75005523_75005568	1.0848	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000001927.5|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr3_+_151437887_151437914	1.05763	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000046977.7|Eltd1|ENSMUSG00000039167.7|EGF, latrophilin seven transmembrane domain containing 1
mm10_v2_chr2_+_20737306_20737321	1.05396	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr13_+_75707484_75707510	1.01487	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr14_-_79771305_79771318	1.01246	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr13_+_118714678_118714701	0.978257	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr10_+_39612934_39612934	0.967315	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr1_-_190170178_190170237	0.951842	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000177288.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr3_+_62419668_62419668	0.939769	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000161057.1|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr5_+_34999070_34999086	0.923111	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114280.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr10_-_25200110_25200178	0.899467	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr5_+_34999046_34999069	0.897995	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114281.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr11_-_26210553_26210585	0.877279	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000101447.3|5730522E02Rik|ENSMUSG00000073101.3|RIKEN cDNA 5730522E02 gene
mm10_v2_chr8_-_120228221_120228297	0.862253	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000183235.1|A330074K22Rik|ENSMUSG00000097960.1|RIKEN cDNA A330074K22 gene
mm10_v2_chr1_-_155417283_155417323	0.814034	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr10_+_127421208_127421235	0.808363	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000168780.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr10_-_53647080_53647080	0.807606	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr9_-_103222063_103222149	0.76588	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000170904.1|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr4_-_14621805_14621819	0.758853	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr5_-_77115145_77115156	0.735768	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000081964.5|Hopx|ENSMUSG00000059325.8|HOP homeobox
mm10_v2_chr5_+_64812336_64812350	0.717147	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr7_-_45103747_45103822	0.709497	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000003512.7|Fcgrt|ENSMUSG00000003420.7|Fc receptor, IgG, alpha chain transporter
mm10_v2_chr2_+_70474923_70474923	0.69816	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000100043.2|Sp5|ENSMUSG00000075304.2|trans-acting transcription factor 5
mm10_v2_chr13_+_83732438_83732566	0.687796	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000182701.1|C130071C03Rik|ENSMUSG00000050334.6|RIKEN cDNA C130071C03 gene
mm10_v2_chr9_+_45370185_45370208	0.666541	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000085939.6|Fxyd6|ENSMUSG00000066705.6|FXYD domain-containing ion transport regulator 6
mm10_v2_chr6_-_136171722_136171849	0.621412	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000053880.6|Grin2b|ENSMUSG00000030209.8|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm10_v2_chr2_-_45117349_45117395	0.610788	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000176438.2|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr2_+_73271925_73271939	0.598738	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000090813.5|Sp9|ENSMUSG00000068859.5|trans-acting transcription factor 9
mm10_v2_chr7_-_73541738_73541758	0.586303	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr14_+_79515618_79515694	0.583244	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr4_+_108719649_108719649	0.569666	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000178992.1|3110021N24Rik|ENSMUSG00000094958.1|RIKEN cDNA 3110021N24 gene
mm10_v2_chr10_-_86011833_86011896	0.542592	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000105304.1|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C 	ENSMUST00000061699.5|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C
mm10_v2_chr19_+_26750939_26750967	0.541518	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000175953.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr5_+_13398688_13398726	0.530277	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000125629.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr1_-_165934900_165935036	0.527324	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr11_-_87359011_87359081	0.525878	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr7_+_103550368_103550368	0.510108	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106888.1|Olfr613|ENSMUSG00000078624.2|olfactory receptor 613
mm10_v2_chr2_+_52038005_52038020	0.498781	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000065927.5|Tnfaip6|ENSMUSG00000053475.5|tumor necrosis factor alpha induced protein 6
mm10_v2_chr13_+_16011851_16011949	0.497432	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000042603.6|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr16_-_74411292_74411430	0.490506	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr11_+_23306910_23306937	0.482213	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000137823.1|Usp34|ENSMUSG00000056342.10|ubiquitin specific peptidase 34
mm10_v2_chr15_-_66812593_66812649	0.451137	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000100572.3|Sla|ENSMUSG00000022372.8|src-like adaptor
mm10_v2_chrM_+_11734_11757	0.447791	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr4_+_21848039_21848077	0.439787	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000098238.2|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18 	ENSMUST00000108229.1|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18
mm10_v2_chr1_-_158356258_158356313	0.43893	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr2_+_152754156_152754186	0.436695	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000010020.5|Cox4i2|ENSMUSG00000009876.7|cytochrome c oxidase subunit IV isoform 2
mm10_v2_chr12_+_49382791_49382883	0.436357	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000179669.1|Foxg1|ENSMUSG00000020950.9|forkhead box G1
mm10_v2_chr11_+_23306884_23306906	0.416501	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000180046.1|Usp34|ENSMUSG00000056342.10|ubiquitin specific peptidase 34
mm10_v2_chr19_-_59170978_59170978	0.414931	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000172821.2|Vax1|ENSMUSG00000006270.6|ventral anterior homeobox containing gene 1
mm10_v2_chr3_-_55055038_55055055	0.408928	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000029368.2|Ccna1|ENSMUSG00000027793.2|cyclin A1
mm10_v2_chr2_-_72986716_72986716	0.401021	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr18_+_9707639_9707661	0.396504	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000040069.8|Colec12|ENSMUSG00000036103.8|collectin sub-family member 12
mm10_v2_chr6_+_63255971_63256036	0.394658	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000159561.1|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2 	ENSMUST00000095852.3|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2
mm10_v2_chr4_+_154964117_154964147	0.392658	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000030931.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4 	ENSMUST00000070953.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4
mm10_v2_chr12_-_111813834_111813858	0.38728	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000021715.5|Xrcc3|ENSMUSG00000021287.6|X-ray repair complementing defective repair in Chinese hamster cells 3
mm10_v2_chr6_-_126645784_126645801	0.387156	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000055168.3|Kcna1|ENSMUSG00000047976.3|potassium voltage-gated channel, shaker-related subfamily, member 1
mm10_v2_chr7_-_73537621_73537766	0.369356	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr9_+_96258697_96258711	0.363755	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000179416.1|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr17_-_29888570_29888629	0.35364	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000171691.1|Mdga1|ENSMUSG00000043557.9|MAM domain containing glycosylphosphatidylinositol anchor 1
mm10_v2_chr6_+_145934113_145934136	0.334256	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000032383.7|Sspn|ENSMUSG00000030255.7|sarcospan
mm10_v2_chr18_+_24603952_24603972	0.317556	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000025120.6|Elp2|ENSMUSG00000024271.7|elongator acetyltransferase complex subunit 2
mm10_v2_chrX_-_74246534_74246556	0.315216	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000101454.2|Flna|ENSMUSG00000031328.9|filamin, alpha 	ENSMUST00000033699.6|Flna|ENSMUSG00000031328.9|filamin, alpha
mm10_v2_chr15_-_11037968_11037968	0.311154	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000058007.5|Rxfp3|ENSMUSG00000060735.3|relaxin family peptide receptor 3
mm10_v2_chrX_+_56454871_56454887	0.309537	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chrX_+_166344692_166344770	0.307135	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000112223.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112224.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112229.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112228.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112227.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112226.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr8_+_4238815_4238886	0.288753	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000003027.7|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000110999.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr17_+_45734506_45734630	0.28774	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr10_+_127421124_127421203	0.28636	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000170336.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr12_-_91849081_91849157	0.283451	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000167466.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000021347.5|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000178462.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans)
mm10_v2_chrX_-_75416533_75416555	0.28131	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000033542.4|Mtcp1|ENSMUSG00000031200.10|mature T cell proliferation 1
mm10_v2_chr1_-_87394721_87394734	0.274686	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000113212.3|Kcnj13|ENSMUSG00000079436.3|potassium inwardly-rectifying channel, subfamily J, member 13
mm10_v2_chr1_-_152625212_152625220	0.272551	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr10_+_115569986_115570035	0.267657	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000173620.1|A930009A15Rik|ENSMUSG00000092210.1|RIKEN cDNA A930009A15 gene
mm10_v2_chr17_+_3397189_3397207	0.265613	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000072156.6|Tiam2|ENSMUSG00000023800.8|T cell lymphoma invasion and metastasis 2
mm10_v2_chr2_-_33086366_33086447	0.264536	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000049618.2|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr7_+_25681158_25681158	0.264058	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr11_+_102604370_102604435	0.260679	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000057893.5|Fzd2|ENSMUSG00000050288.5|frizzled homolog 2 (Drosophila)
mm10_v2_chr3_-_94412883_94412890	0.256657	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000181305.1|1700040D17Rik|ENSMUSG00000097515.1|RIKEN cDNA 1700040D17 gene
mm10_v2_chr18_+_37819543_37819570	0.252774	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000055935.5|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr4_+_116720920_116721004	0.252716	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000045542.6|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2 	ENSMUST00000106459.1|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2
mm10_v2_chr8_+_4238733_4238767	0.248076	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000110998.2|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000062686.4|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr2_+_106693185_106693278	0.246242	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr11_+_60537978_60538074	0.236977	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr5_+_135106881_135106918	0.225896	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000005507.3|Mlxipl|ENSMUSG00000005373.7|MLX interacting protein-like
mm10_v2_chr10_-_80421847_80421876	0.219114	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000156244.1|Tcf3|ENSMUSG00000020167.8|transcription factor 3
mm10_v2_chr7_+_29071597_29071613	0.218785	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000180926.1|Gm26604|ENSMUSG00000097079.1|predicted gene, 26604
mm10_v2_chr4_+_97777780_97777834	0.218721	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000107062.2|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000052018.5|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000107057.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr10_+_127420334_127420348	0.196591	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000171434.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr7_-_66427469_66427517	0.195332	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000015278.7|Aldh1a3|ENSMUSG00000015134.8|aldehyde dehydrogenase family 1, subfamily A3
mm10_v2_chr11_+_116843278_116843278	0.193767	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106370.3|Mettl23|ENSMUSG00000090266.4|methyltransferase like 23
mm10_v2_chr13_-_73678005_73678026	0.191475	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000022105.7|Slc6a18|ENSMUSG00000021612.8|solute carrier family 6 (neurotransmitter transporter), member 18 	ENSMUST00000109680.2|Slc6a18|ENSMUSG00000021612.8|solute carrier family 6 (neurotransmitter transporter), member 18 	ENSMUST00000109679.2|Slc6a18|ENSMUSG00000021612.8|solute carrier family 6 (neurotransmitter transporter), member 18
mm10_v2_chr13_-_106847267_106847267	0.190129	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000057427.4|Lrrc70|ENSMUSG00000078933.1|leucine rich repeat containing 70
mm10_v2_chr8_+_121116163_121116177	0.189418	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000054691.6|Foxc2|ENSMUSG00000046714.6|forkhead box C2
mm10_v2_chr10_+_18469958_18469981	0.18556	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000162891.1|Nhsl1|ENSMUSG00000039835.9|NHS-like 1 	ENSMUST00000100054.3|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr12_+_111814170_111814245	0.183247	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000021714.7|Zfyve21|ENSMUSG00000021286.7|zinc finger, FYVE domain containing 21
mm10_v2_chr7_+_102210335_102210445	0.179594	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000140631.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000120879.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000146996.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2
mm10_v2_chr1_+_132298606_132298631	0.178711	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr14_+_53324632_53324632	0.177513	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000178100.1|Trav7n-6|ENSMUSG00000095415.1|T cell receptor alpha variable 7N-6
mm10_v2_chr2_-_79456750_79456761	0.177105	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr11_+_102285161_102285251	0.173274	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000156326.1|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr17_-_29007925_29007962	0.172108	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000009138.5|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38 	ENSMUST00000119274.1|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38
mm10_v2_chr15_+_79690869_79690905	0.171955	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000046463.8|Gtpbp1|ENSMUSG00000042535.8|GTP binding protein 1
mm10_v2_chr13_+_80883403_80883422	0.16835	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr13_+_42680565_42680623	0.163072	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000128646.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr17_+_45506825_45506857	0.159358	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000024733.7|Aars2|ENSMUSG00000023938.7|alanyl-tRNA synthetase 2, mitochondrial (putative)
mm10_v2_chr4_-_126968124_126968154	0.152802	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr9_+_113930934_113930987	0.150138	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr6_-_57535422_57535447	0.149895	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000042766.3|Ppm1k|ENSMUSG00000037826.3|protein phosphatase 1K (PP2C domain containing)
mm10_v2_chr3_-_146682410_146682522	0.143869	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000124931.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13 	ENSMUST00000147113.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13
mm10_v2_chr8_+_83666827_83666882	0.142803	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr13_+_36117349_36117411	0.138686	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000021857.5|Fars2|ENSMUSG00000021420.6|phenylalanine-tRNA synthetase 2 (mitochondrial) 	ENSMUST00000099582.2|Fars2|ENSMUSG00000021420.6|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr9_+_61372359_61372383	0.136141	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000178113.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159386.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr16_+_13358375_13358439	0.131178	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000149359.1|Mkl2|ENSMUSG00000009569.8|MKL/myocardin-like 2
mm10_v2_chr15_-_79285502_79285537	0.108135	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000165408.1|Baiap2l2|ENSMUSG00000018126.9|BAI1-associated protein 2-like 2
mm10_v2_chr8_+_54954728_54954820	0.105839	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000033915.7|Gpm6a|ENSMUSG00000031517.7|glycoprotein m6a
mm10_v2_chr4_-_155056784_155056827	0.104835	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000131173.2|Plch2|ENSMUSG00000029055.11|phospholipase C, eta 2
mm10_v2_chr2_-_6722187_6722236	0.0873632	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000182657.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr16_-_97170707_97170759	0.0850204	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr2_-_6721890_6721928	0.0807184	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000114927.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr5_-_122989260_122989306	0.0785985	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000118027.1|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr8_-_84662841_84662859	0.0755768	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000060427.4|Ier2|ENSMUSG00000053560.4|immediate early response 2
mm10_v2_chr18_+_56432116_56432163	0.0737041	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr5_-_23616528_23616597	0.0611028	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr7_-_102210120_102210157	0.0605548	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000070165.5|Nup98|ENSMUSG00000063550.7|nucleoporin 98
mm10_v2_chr18_-_24603464_24603530	0.0603758	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000154205.1|Slc39a6|ENSMUSG00000024270.5|solute carrier family 39 (metal ion transporter), member 6
mm10_v2_chr12_-_48559971_48559971	0.0598765	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000169406.1|Gm1818|ENSMUSG00000091277.1|predicted gene 1818
mm10_v2_chr11_-_97700327_97700497	0.0588548	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000018681.7|Pcgf2|ENSMUSG00000018537.10|polycomb group ring finger 2
mm10_v2_chr5_-_122988533_122988705	0.0494745	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000086200.4|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B 	ENSMUST00000156474.1|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr15_+_81744848_81744848	0.0442765	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr2_-_6721606_6721629	0.0439505	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000150624.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000142941.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000100429.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182879.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr2_+_109917639_109917656	0.043546	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr12_+_21417872_21417911	0.0418803	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000180671.1|Gm4419|ENSMUSG00000097055.1|predicted gene 4419
mm10_v2_chr16_-_4880284_4880315	0.0358301	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chrX_-_157415286_157415318	0.0347262	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000079945.4|Phex|ENSMUSG00000057457.5|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets) 	ENSMUST00000138396.1|Phex|ENSMUSG00000057457.5|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)
mm10_v2_chr7_-_115824699_115824752	0.0301084	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000169129.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr5_-_122989086_122989111	0.0273276	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000046073.9|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr17_+_46161021_46161072	0.0265886	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000024748.7|Gtpbp2|ENSMUSG00000023952.7|GTP binding protein 2 	ENSMUST00000172170.1|Gtpbp2|ENSMUSG00000023952.7|GTP binding protein 2
mm10_v2_chr12_+_74297474_74297474	0.0263995	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000072100.3|Dbpht2|ENSMUSG00000029878.5|DNA binding protein with his-thr domain
mm10_v2_chr12_-_27160311_27160476	0.0247256	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000182473.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000177636.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000183238.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr7_+_126950687_126950729	0.0240732	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000106333.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr16_-_57754707_57754737	0.0234088	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000089332.4|Col8a1|ENSMUSG00000068196.4|collagen, type VIII, alpha 1
mm10_v2_chr13_-_18382041_18382041	0.0233519	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000139064.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2 	ENSMUST00000175703.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2
mm10_v2_chr17_-_35697971_35698001	0.0222185	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000146472.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr5_+_14025305_14025327	0.0167604	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000073957.6|Sema3e|ENSMUSG00000063531.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
mm10_v2_chr18_+_23415400_23415454	0.0113166	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000115832.2|Dtna|ENSMUSG00000024302.9|dystrobrevin alpha 	ENSMUST00000047954.7|Dtna|ENSMUSG00000024302.9|dystrobrevin alpha
mm10_v2_chr2_+_132847719_132847743	0.0109644	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000124836.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1 	ENSMUST00000154160.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1
mm10_v2_chr3_+_32436151_32436151	0.00893477	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr7_+_49910112_49910146	0.00595515	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr13_+_89540636_89540678	0.00214071	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr11_-_33203588_33203599	0.0012221	Msx1_Lhx9_Barx1_Rax_Dlx6	ENSMUST00000037746.6|Tlx3|ENSMUSG00000040610.6|T cell leukemia, homeobox 3
