mm10_v2_chrX_+_103422010_103422010	8.57085	Pax6	ENSMUST00000182089.1|Gm26992|ENSMUSG00000098078.1|predicted gene, 26992
mm10_v2_chr19_-_57118981_57119026	7.64575	Pax6	ENSMUST00000111528.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1 	ENSMUST00000111529.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1 	ENSMUST00000104902.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr19_-_57118897_57118979	6.65265	Pax6	ENSMUST00000111526.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr3_+_65109343_65109420	5.33103	Pax6	ENSMUST00000159525.1|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENSMUST00000049230.8|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm10_v2_chr13_-_110280103_110280213	5.30801	Pax6	ENSMUST00000167824.1|Rab3c|ENSMUSG00000021700.9|RAB3C, member RAS oncogene family
mm10_v2_chr1_-_38836090_38836090	4.64673	Pax6	ENSMUST00000147695.1|Lonrf2|ENSMUSG00000048814.4|LON peptidase N-terminal domain and ring finger 2
mm10_v2_chr4_+_85205417_85205535	4.42326	Pax6	ENSMUST00000030212.8|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107189.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107184.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2
mm10_v2_chr6_-_60829826_60829855	4.03844	Pax6	ENSMUST00000163779.1|Snca|ENSMUSG00000025889.7|synuclein, alpha
mm10_v2_chr11_-_95587691_95587735	3.62842	Pax6	ENSMUST00000000122.6|Ngfr|ENSMUSG00000000120.6|nerve growth factor receptor (TNFR superfamily, member 16)
mm10_v2_chr8_-_57962564_57962564	3.53756	Pax6	ENSMUST00000098757.3|Galntl6|ENSMUSG00000096914.1|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm10_v2_chr10_+_80356459_80356494	3.4699	Pax6	ENSMUST00000039836.8|Plk5|ENSMUSG00000035486.8|polo-like kinase 5 	ENSMUST00000105351.1|Plk5|ENSMUSG00000035486.8|polo-like kinase 5
mm10_v2_chr2_-_162661075_162661147	3.39469	Pax6	ENSMUST00000109442.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109445.2|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109443.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109441.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T
mm10_v2_chr18_-_34373313_34373443	3.26006	Pax6	ENSMUST00000006027.5|Reep5|ENSMUSG00000005873.5|receptor accessory protein 5
mm10_v2_chr3_-_89245159_89245199	3.24504	Pax6	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr6_-_118780324_118780324	2.85539	Pax6	ENSMUST00000112793.3|Cacna1c|ENSMUSG00000051331.8|calcium channel, voltage-dependent, L type, alpha 1C subunit 	ENSMUST00000075591.6|Cacna1c|ENSMUSG00000051331.8|calcium channel, voltage-dependent, L type, alpha 1C subunit 	ENSMUST00000078320.7|Cacna1c|ENSMUSG00000051331.8|calcium channel, voltage-dependent, L type, alpha 1C subunit 	ENSMUST00000112790.2|Cacna1c|ENSMUSG00000051331.8|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm10_v2_chr5_-_18360384_18360473	2.84714	Pax6	ENSMUST00000074694.5|Gnai1|ENSMUSG00000057614.5|guanine nucleotide binding protein (G protein), alpha inhibiting 1
mm10_v2_chr3_-_89245005_89245031	2.84189	Pax6	ENSMUST00000107464.1|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr7_-_12775658_12775658	2.83593	Pax6	ENSMUST00000046245.5|Zscan18|ENSMUSG00000070822.4|zinc finger and SCAN domain containing 18
mm10_v2_chr18_+_37447641_37447674	2.83318	Pax6	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr17_+_43016536_43016591	2.62828	Pax6	ENSMUST00000024708.4|Tnfrsf21|ENSMUSG00000023915.4|tumor necrosis factor receptor superfamily, member 21
mm10_v2_chr15_-_101850778_101850792	2.1223	Pax6	ENSMUST00000023790.3|Krt1|ENSMUSG00000046834.6|keratin 1
mm10_v2_chr9_+_15239045_15239155	2.10287	Pax6	ENSMUST00000034413.6|Vstm5|ENSMUSG00000031937.6|V-set and transmembrane domain containing 5
mm10_v2_chr15_+_84669565_84669620	2.03159	Pax6	ENSMUST00000171460.1|Prr5|ENSMUSG00000036106.9|proline rich 5 (renal)
mm10_v2_chr13_+_64432479_64432557	1.97465	Pax6	ENSMUST00000021939.6|Cdk20|ENSMUSG00000021483.7|cyclin-dependent kinase 20
mm10_v2_chr5_+_90903864_90903899	1.75459	Pax6	ENSMUST00000075433.6|Cxcl2|ENSMUSG00000058427.7|chemokine (C-X-C motif) ligand 2
mm10_v2_chr9_+_50775347_50775369	1.54281	Pax6	ENSMUST00000159576.1|Alg9|ENSMUSG00000032059.7|asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
mm10_v2_chr5_-_142906702_142906754	1.27814	Pax6	ENSMUST00000167721.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000163829.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000100497.4|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr5_+_112255813_112255874	1.26595	Pax6	ENSMUST00000031286.6|Crybb1|ENSMUSG00000029343.11|crystallin, beta B1 	ENSMUST00000131673.1|Crybb1|ENSMUSG00000029343.11|crystallin, beta B1 	ENSMUST00000112375.1|Crybb1|ENSMUSG00000029343.11|crystallin, beta B1
mm10_v2_chr5_+_149265035_149265058	1.2624	Pax6	ENSMUST00000130144.1|Alox5ap|ENSMUSG00000060063.6|arachidonate 5-lipoxygenase activating protein 	ENSMUST00000071130.3|Alox5ap|ENSMUSG00000060063.6|arachidonate 5-lipoxygenase activating protein
mm10_v2_chr9_-_10904697_10904726	1.23205	Pax6	ENSMUST00000162484.1|Cntn5|ENSMUSG00000039488.9|contactin 5
mm10_v2_chr13_-_113618549_113618565	1.2185	Pax6	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr6_-_88045190_88045270	1.15599	Pax6	ENSMUST00000113596.1|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family 	ENSMUST00000113600.3|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family
mm10_v2_chr16_-_22857514_22857576	1.14276	Pax6	ENSMUST00000004576.6|Tbccd1|ENSMUSG00000004462.6|TBCC domain containing 1
mm10_v2_chr16_+_4968936_4968936	1.10266	Pax6	ENSMUST00000090457.5|4930451G09Rik|ENSMUSG00000022543.8|RIKEN cDNA 4930451G09 gene
mm10_v2_chr17_-_57059795_57059863	1.06623	Pax6	ENSMUST00000040280.7|Slc25a23|ENSMUSG00000046329.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm10_v2_chr6_-_122856151_122856163	1.00191	Pax6	ENSMUST00000042081.8|C3ar1|ENSMUSG00000040552.8|complement component 3a receptor 1
mm10_v2_chr17_+_34604262_34604304	0.912872	Pax6	ENSMUST00000174041.1|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr6_-_145048809_145048821	0.907649	Pax6	ENSMUST00000032402.5|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr2_+_163602331_163602359	0.905887	Pax6	ENSMUST00000152135.1|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like
mm10_v2_chr19_+_34290653_34290668	0.868458	Pax6	ENSMUST00000025691.5|Fas|ENSMUSG00000024778.6|Fas (TNF receptor superfamily member 6) 	ENSMUST00000112472.2|Fas|ENSMUSG00000024778.6|Fas (TNF receptor superfamily member 6)
mm10_v2_chr6_-_124741374_124741402	0.86287	Pax6	ENSMUST00000004389.5|Grcc10|ENSMUSG00000072772.3|gene rich cluster, C10 gene
mm10_v2_chr11_-_6200411_6200446	0.851424	Pax6	ENSMUST00000066496.3|Nudcd3|ENSMUSG00000053838.8|NudC domain containing 3
mm10_v2_chr15_+_6299781_6299795	0.847191	Pax6	ENSMUST00000078019.6|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr10_+_26229707_26229763	0.837696	Pax6	ENSMUST00000060716.5|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3 	ENSMUST00000164660.1|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3
mm10_v2_chr14_+_34170640_34170655	0.835132	Pax6	ENSMUST00000104925.3|Rpl23a-ps3|ENSMUSG00000078126.3|ribosomal protein L23A, pseudogene 3
mm10_v2_chr15_+_6299797_6299851	0.806502	Pax6	ENSMUST00000159046.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000161040.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr2_+_163602294_163602322	0.805825	Pax6	ENSMUST00000171696.1|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like 	ENSMUST00000109408.3|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like
mm10_v2_chr12_+_112976471_112976563	0.789773	Pax6	ENSMUST00000165079.1|Btbd6|ENSMUSG00000002803.7|BTB (POZ) domain containing 6 	ENSMUST00000002880.6|Btbd6|ENSMUSG00000002803.7|BTB (POZ) domain containing 6
mm10_v2_chr11_-_67965631_67965663	0.762003	Pax6	ENSMUST00000021287.5|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16 	ENSMUST00000126766.1|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16
mm10_v2_chr8_+_31150307_31150346	0.753493	Pax6	ENSMUST00000098842.2|Tti2|ENSMUSG00000031577.9|TELO2 interacting protein 2
mm10_v2_chr4_-_3835595_3835665	0.704249	Pax6	ENSMUST00000138502.1|Rps20|ENSMUSG00000028234.6|ribosomal protein S20
mm10_v2_chr16_-_52452654_52452654	0.704215	Pax6	ENSMUST00000168071.1|Alcam|ENSMUSG00000022636.7|activated leukocyte cell adhesion molecule
mm10_v2_chr11_+_67966442_67966497	0.684369	Pax6	ENSMUST00000021286.4|Stx8|ENSMUSG00000020903.7|syntaxin 8 	ENSMUST00000108675.1|Stx8|ENSMUSG00000020903.7|syntaxin 8
mm10_v2_chr4_+_155491353_155491411	0.634268	Pax6	ENSMUST00000165335.1|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000105616.3|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000030940.7|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1
mm10_v2_chr2_-_75981967_75981967	0.584673	Pax6	ENSMUST00000099994.3|Ttc30a1|ENSMUSG00000075271.3|tetratricopeptide repeat domain 30A1
mm10_v2_chrX_+_23693043_23693131	0.583738	Pax6	ENSMUST00000035766.6|Wdr44|ENSMUSG00000036769.8|WD repeat domain 44 	ENSMUST00000101670.2|Wdr44|ENSMUSG00000036769.8|WD repeat domain 44
mm10_v2_chr6_+_123229843_123229863	0.552068	Pax6	ENSMUST00000112554.2|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000024118.4|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000117130.1|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n
mm10_v2_chr4_-_139832920_139833007	0.539292	Pax6	ENSMUST00000174681.1|Pax7|ENSMUSG00000028736.7|paired box gene 7
mm10_v2_chr19_+_6400611_6400623	0.538025	Pax6	ENSMUST00000113467.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr17_-_33718591_33718690	0.516524	Pax6	ENSMUST00000174040.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173015.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000066121.6|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000172767.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173329.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2
mm10_v2_chr11_-_84870712_84870807	0.473191	Pax6	ENSMUST00000170741.1|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2 	ENSMUST00000172405.1|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2 	ENSMUST00000100686.3|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2 	ENSMUST00000108081.2|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2
mm10_v2_chr5_-_38480131_38480306	0.46985	Pax6	ENSMUST00000143758.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9 	ENSMUST00000067886.5|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chr1_-_195131536_195131588	0.411995	Pax6	ENSMUST00000075451.6|Cr1l|ENSMUSG00000016481.10|complement component (3b/4b) receptor 1-like
mm10_v2_chr2_+_105904629_105904685	0.409941	Pax6	ENSMUST00000037499.5|Immp1l|ENSMUSG00000042670.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
mm10_v2_chr9_-_62811592_62811659	0.391417	Pax6	ENSMUST00000034775.8|Fem1b|ENSMUSG00000032244.8|feminization 1 homolog b (C. elegans)
mm10_v2_chr13_-_24937585_24937691	0.37936	Pax6	ENSMUST00000037615.6|Aldh5a1|ENSMUSG00000035936.6|aldhehyde dehydrogenase family 5, subfamily A1
mm10_v2_chr17_+_25366550_25366550	0.341861	Pax6	ENSMUST00000069616.7|Tpsb2|ENSMUSG00000033825.9|tryptase beta 2
mm10_v2_chr12_-_51829525_51829553	0.329415	Pax6	ENSMUST00000179265.1|Hectd1|ENSMUSG00000035247.9|HECT domain containing 1 	ENSMUST00000042052.8|Hectd1|ENSMUSG00000035247.9|HECT domain containing 1
mm10_v2_chr6_-_113377376_113377396	0.327196	Pax6	ENSMUST00000043333.2|Tada3|ENSMUSG00000048930.6|transcriptional adaptor 3
mm10_v2_chr6_+_48395652_48395688	0.303332	Pax6	ENSMUST00000077093.4|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1
mm10_v2_chr11_-_84870646_84870711	0.286238	Pax6	ENSMUST00000018547.2|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2
mm10_v2_chr13_+_66905415_66905415	0.21231	Pax6	ENSMUST00000099412.2|Gm10767|ENSMUSG00000074826.4|predicted gene 10767
mm10_v2_chr13_+_73626886_73627001	0.181558	Pax6	ENSMUST00000022104.7|Tert|ENSMUSG00000021611.8|telomerase reverse transcriptase
mm10_v2_chr7_-_86775860_86775872	0.165571	Pax6	ENSMUST00000001824.5|Folh1|ENSMUSG00000001773.7|folate hydrolase 1
mm10_v2_chr9_-_22307638_22307694	0.165374	Pax6	ENSMUST00000086278.6|Zfp810|ENSMUSG00000066829.6|zinc finger protein 810
mm10_v2_chr16_+_20498817_20498866	0.164113	Pax6	ENSMUST00000003320.6|Eif2b5|ENSMUSG00000003235.6|eukaryotic translation initiation factor 2B, subunit 5 epsilon
mm10_v2_chr15_+_103272893_103272911	0.162299	Pax6	ENSMUST00000100162.3|Copz1|ENSMUSG00000060992.8|coatomer protein complex, subunit zeta 1
mm10_v2_chr11_-_104550392_104550419	0.154159	Pax6	ENSMUST00000106962.2|Cdc27|ENSMUSG00000020687.7|cell division cycle 27
mm10_v2_chr11_-_84870812_84870823	0.151469	Pax6	ENSMUST00000168434.1|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2
mm10_v2_chr4_-_70410422_70410463	0.0915954	Pax6	ENSMUST00000144099.1|Cdk5rap2|ENSMUSG00000039298.10|CDK5 regulatory subunit associated protein 2
mm10_v2_chr14_-_43819639_43819639	0.0768388	Pax6	ENSMUST00000100691.3|Ear1|ENSMUSG00000072601.4|eosinophil-associated, ribonuclease A family, member 1
mm10_v2_chr13_-_53377355_53377373	0.0745372	Pax6	ENSMUST00000021920.6|Sptlc1|ENSMUSG00000021468.7|serine palmitoyltransferase, long chain base subunit 1
mm10_v2_chr6_+_48395586_48395646	0.0662263	Pax6	ENSMUST00000114571.1|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1 	ENSMUST00000114572.3|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1 	ENSMUST00000031815.5|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1
mm10_v2_chr7_+_12897800_12897885	0.0596137	Pax6	ENSMUST00000055528.4|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000117189.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000120809.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000119989.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22
mm10_v2_chr7_+_141228766_141228813	0.0461461	Pax6	ENSMUST00000106027.2|Phrf1|ENSMUSG00000038611.10|PHD and ring finger domains 1
mm10_v2_chr8_+_95825353_95825354	0.0386623	Pax6	ENSMUST00000074053.4|Gm10094|ENSMUSG00000061104.4|predicted gene 10094
mm10_v2_chr13_-_32781716_32781779	0.00425205	Pax6	ENSMUST00000134352.1|Mylk4|ENSMUSG00000044951.7|myosin light chain kinase family, member 4 	ENSMUST00000057428.4|Mylk4|ENSMUSG00000044951.7|myosin light chain kinase family, member 4
