mm10_v2_chr7_-_75782080_75782126	21.8106	Pitx2_Otx2	ENSMUST00000181224.1|AU020206|ENSMUSG00000097415.1|expressed sequence AU020206
mm10_v2_chr6_-_88898664_88898780	18.5524	Pitx2_Otx2	ENSMUST00000058011.6|Mcm2|ENSMUSG00000002870.7|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)
mm10_v2_chr2_+_164562579_164562721	14.1974	Pitx2_Otx2	ENSMUST00000017867.3|Wfdc2|ENSMUSG00000017723.5|WAP four-disulfide core domain 2 	ENSMUST00000109344.2|Wfdc2|ENSMUSG00000017723.5|WAP four-disulfide core domain 2 	ENSMUST00000109345.2|Wfdc2|ENSMUSG00000017723.5|WAP four-disulfide core domain 2
mm10_v2_chr9_-_70421533_70421592	14.1089	Pitx2_Otx2	ENSMUST00000034742.6|Ccnb2|ENSMUSG00000032218.6|cyclin B2
mm10_v2_chr11_-_106998483_106998491	14.0479	Pitx2_Otx2	ENSMUST00000124541.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr4_-_117182623_117182639	13.3477	Pitx2_Otx2	ENSMUST00000065896.2|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr14_-_47411666_47411666	10.7308	Pitx2_Otx2	ENSMUST00000111778.3|Dlgap5|ENSMUSG00000037544.7|discs, large (Drosophila) homolog-associated protein 5
mm10_v2_chr18_+_34751803_34751912	10.4695	Pitx2_Otx2	ENSMUST00000181453.1|2010110K18Rik|ENSMUSG00000097755.1|RIKEN cDNA 2010110K18 gene 	ENSMUST00000181641.1|2010110K18Rik|ENSMUSG00000097755.1|RIKEN cDNA 2010110K18 gene
mm10_v2_chr17_+_35861318_35861339	10.1262	Pitx2_Otx2	ENSMUST00000074259.8|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein) 	ENSMUST00000174873.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr14_-_20181773_20181790	9.54303	Pitx2_Otx2	ENSMUST00000024011.8|Kcnk5|ENSMUSG00000023243.8|potassium channel, subfamily K, member 5
mm10_v2_chr16_+_30065333_30065351	9.21367	Pitx2_Otx2	ENSMUST00000023171.7|Hes1|ENSMUSG00000022528.7|hairy and enhancer of split 1 (Drosophila)
mm10_v2_chr9_+_119357381_119357381	9.20894	Pitx2_Otx2	ENSMUST00000039610.8|Xylb|ENSMUSG00000035769.8|xylulokinase homolog (H. influenzae)
mm10_v2_chr18_-_74207771_74207818	9.05009	Pitx2_Otx2	ENSMUST00000040188.8|Ska1|ENSMUSG00000036223.9|spindle and kinetochore associated complex subunit 1 	ENSMUST00000177604.1|Ska1|ENSMUSG00000036223.9|spindle and kinetochore associated complex subunit 1
mm10_v2_chr14_-_47418407_47418407	8.90135	Pitx2_Otx2	ENSMUST00000043296.3|Dlgap5|ENSMUSG00000037544.7|discs, large (Drosophila) homolog-associated protein 5
mm10_v2_chr11_+_97029925_97029997	8.4181	Pitx2_Otx2	ENSMUST00000021249.4|Scrn2|ENSMUSG00000020877.5|secernin 2
mm10_v2_chr3_-_36571952_36572150	8.27889	Pitx2_Otx2	ENSMUST00000029270.3|Ccna2|ENSMUSG00000027715.3|cyclin A2
mm10_v2_chr14_+_55824795_55824889	8.22108	Pitx2_Otx2	ENSMUST00000024179.5|Nfatc4|ENSMUSG00000023411.5|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 	ENSMUST00000172271.1|Nfatc4|ENSMUSG00000023411.5|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4
mm10_v2_chr7_+_16992708_16992708	7.9327	Pitx2_Otx2	ENSMUST00000094805.4|Ccdc8|ENSMUSG00000041117.8|coiled-coil domain containing 8
mm10_v2_chr10_-_128180265_128180307	7.5855	Pitx2_Otx2	ENSMUST00000099139.1|Rbms2|ENSMUSG00000040043.9|RNA binding motif, single stranded interacting protein 2
mm10_v2_chr1_-_175979114_175979114	7.43227	Pitx2_Otx2	ENSMUST00000104983.1|B020018G12Rik|ENSMUSG00000078184.1|RIKEN cDNA B020018G12 gene
mm10_v2_chr7_+_16781341_16781352	7.3724	Pitx2_Otx2	ENSMUST00000108496.2|Slc1a5|ENSMUSG00000001918.11|solute carrier family 1 (neutral amino acid transporter), member 5
mm10_v2_chr7_-_99353104_99353230	7.3513	Pitx2_Otx2	ENSMUST00000169437.1|Serpinh1|ENSMUSG00000070436.5|serine (or cysteine) peptidase inhibitor, clade H, member 1 	ENSMUST00000094154.4|Serpinh1|ENSMUSG00000070436.5|serine (or cysteine) peptidase inhibitor, clade H, member 1
mm10_v2_chr11_-_60811228_60811265	7.23479	Pitx2_Otx2	ENSMUST00000018744.8|Shmt1|ENSMUSG00000020534.8|serine hydroxymethyltransferase 1 (soluble)
mm10_v2_chr6_+_56017489_56017517	7.03904	Pitx2_Otx2	ENSMUST00000052827.4|Ppp1r17|ENSMUSG00000002930.5|protein phosphatase 1, regulatory subunit 17
mm10_v2_chr8_+_127447669_127447746	6.97532	Pitx2_Otx2	ENSMUST00000159511.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr17_+_80127447_80127477	6.79576	Pitx2_Otx2	ENSMUST00000039205.4|Galm|ENSMUSG00000035473.4|galactose mutarotase
mm10_v2_chr10_+_128238034_128238069	6.72469	Pitx2_Otx2	ENSMUST00000105245.2|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1
mm10_v2_chr1_+_135232045_135232110	6.69285	Pitx2_Otx2	ENSMUST00000110798.3|Gm4204|ENSMUSG00000079139.3|predicted gene 4204
mm10_v2_chr15_-_82244716_82244755	6.66681	Pitx2_Otx2	ENSMUST00000089155.4|Cenpm|ENSMUSG00000068101.4|centromere protein M 	ENSMUST00000089157.3|Cenpm|ENSMUSG00000068101.4|centromere protein M
mm10_v2_chr8_+_114133557_114133597	6.4741	Pitx2_Otx2	ENSMUST00000073521.5|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000066514.6|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr17_+_35861343_35861486	6.42881	Pitx2_Otx2	ENSMUST00000172931.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr5_-_135251209_135251242	6.30867	Pitx2_Otx2	ENSMUST00000062572.2|Fzd9|ENSMUSG00000049551.2|frizzled homolog 9 (Drosophila)
mm10_v2_chr10_-_92722356_92722420	6.23731	Pitx2_Otx2	ENSMUST00000020163.6|Nedd1|ENSMUSG00000019988.6|neural precursor cell expressed, developmentally down-regulated gene 1
mm10_v2_chr3_+_85915722_85915722	6.19905	Pitx2_Otx2	ENSMUST00000054148.7|Gm9790|ENSMUSG00000044330.7|predicted gene 9790
mm10_v2_chr2_+_158610731_158610787	6.15527	Pitx2_Otx2	ENSMUST00000045738.4|Slc32a1|ENSMUSG00000037771.11|solute carrier family 32 (GABA vesicular transporter), member 1
mm10_v2_chr18_-_60501983_60501983	5.9707	Pitx2_Otx2	ENSMUST00000042710.6|Smim3|ENSMUSG00000038059.6|small integral membrane protein 3
mm10_v2_chr17_+_87635974_87635990	5.96816	Pitx2_Otx2	ENSMUST00000053577.8|Epcam|ENSMUSG00000045394.8|epithelial cell adhesion molecule
mm10_v2_chr2_-_93957040_93957054	5.75145	Pitx2_Otx2	ENSMUST00000148314.2|Gm13889|ENSMUSG00000087006.2|predicted gene 13889
mm10_v2_chr8_+_114133635_114133662	5.68415	Pitx2_Otx2	ENSMUST00000147605.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000134593.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr9_-_100486788_100486788	5.59275	Pitx2_Otx2	ENSMUST00000098458.3|Il20rb|ENSMUSG00000044244.12|interleukin 20 receptor beta
mm10_v2_chr4_+_80910646_80910685	5.55348	Pitx2_Otx2	ENSMUST00000055922.3|Lurap1l|ENSMUSG00000048706.3|leucine rich adaptor protein 1-like
mm10_v2_chr15_+_25752860_25752979	5.53388	Pitx2_Otx2	ENSMUST00000022882.5|Myo10|ENSMUSG00000022272.11|myosin X 	ENSMUST00000135173.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr11_+_117199641_117199663	5.4942	Pitx2_Otx2	ENSMUST00000093907.4|Sept9|ENSMUSG00000059248.7|septin 9
mm10_v2_chr18_+_34736359_34736359	5.48421	Pitx2_Otx2	ENSMUST00000105038.2|Gm3550|ENSMUSG00000078240.2|predicted gene 3550
mm10_v2_chr3_+_116878227_116878227	5.44326	Pitx2_Otx2	ENSMUST00000040260.6|Frrs1|ENSMUSG00000033386.6|ferric-chelate reductase 1
mm10_v2_chr14_+_65806066_65806232	5.41719	Pitx2_Otx2	ENSMUST00000139644.1|Pbk|ENSMUSG00000022033.3|PDZ binding kinase
mm10_v2_chr10_+_62947011_62947073	5.36841	Pitx2_Otx2	ENSMUST00000131422.1|Dna2|ENSMUSG00000036875.9|DNA replication helicase 2 homolog (yeast)
mm10_v2_chr12_+_118846329_118846329	5.35533	Pitx2_Otx2	ENSMUST00000063918.2|Sp8|ENSMUSG00000048562.6|trans-acting transcription factor 8
mm10_v2_chr10_+_20347788_20347859	5.33661	Pitx2_Otx2	ENSMUST00000169712.1|Mtfr2|ENSMUSG00000019992.7|mitochondrial fission regulator 2
mm10_v2_chr8_+_71406003_71406050	5.32672	Pitx2_Otx2	ENSMUST00000119976.1|Ankle1|ENSMUSG00000046295.7|ankyrin repeat and LEM domain containing 1 	ENSMUST00000120725.1|Ankle1|ENSMUSG00000046295.7|ankyrin repeat and LEM domain containing 1
mm10_v2_chr3_+_131112785_131112803	5.30184	Pitx2_Otx2	ENSMUST00000098611.3|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1
mm10_v2_chr3_+_55112080_55112171	5.26041	Pitx2_Otx2	ENSMUST00000044116.7|Spg20|ENSMUSG00000036580.9|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) 	ENSMUST00000107971.2|Spg20|ENSMUSG00000036580.9|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) 	ENSMUST00000118118.1|Spg20|ENSMUSG00000036580.9|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm10_v2_chr17_+_50698525_50698553	5.25175	Pitx2_Otx2	ENSMUST00000061681.7|Gm7334|ENSMUSG00000044645.7|predicted gene 7334
mm10_v2_chr5_+_110330697_110330767	5.24886	Pitx2_Otx2	ENSMUST00000112481.1|Pole|ENSMUSG00000007080.8|polymerase (DNA directed), epsilon
mm10_v2_chr8_+_33653238_33653238	5.24053	Pitx2_Otx2	ENSMUST00000033992.8|Gsr|ENSMUSG00000031584.10|glutathione reductase
mm10_v2_chr11_-_84068554_84068604	5.1594	Pitx2_Otx2	ENSMUST00000164891.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr11_-_84069179_84069261	5.10306	Pitx2_Otx2	ENSMUST00000138208.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr6_+_134929118_134929164	5.08829	Pitx2_Otx2	ENSMUST00000185152.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184504.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chr6_+_134929089_134929103	5.08038	Pitx2_Otx2	ENSMUST00000183867.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184991.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000183905.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chr11_-_102925086_102925130	5.07994	Pitx2_Otx2	ENSMUST00000021311.9|Kif18b|ENSMUSG00000051378.10|kinesin family member 18B
mm10_v2_chr10_-_77089428_77089477	5.06449	Pitx2_Otx2	ENSMUST00000156009.1|Col18a1|ENSMUSG00000001435.8|collagen, type XVIII, alpha 1
mm10_v2_chr4_-_149137536_149137629	4.99452	Pitx2_Otx2	ENSMUST00000176124.1|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1 	ENSMUST00000177408.1|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1 	ENSMUST00000105695.1|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1 	ENSMUST00000030813.3|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1
mm10_v2_chr8_-_116993459_116993538	4.95786	Pitx2_Otx2	ENSMUST00000040484.5|Gcsh|ENSMUSG00000034424.5|glycine cleavage system protein H (aminomethyl carrier)
mm10_v2_chr11_-_106999482_106999541	4.9562	Pitx2_Otx2	ENSMUST00000018506.6|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr1_-_5070281_5070288	4.93774	Pitx2_Otx2	ENSMUST00000147158.1|Rgs20|ENSMUSG00000002459.11|regulator of G-protein signaling 20 	ENSMUST00000118000.1|Rgs20|ENSMUSG00000002459.11|regulator of G-protein signaling 20
mm10_v2_chr6_-_124814288_124814296	4.91489	Pitx2_Otx2	ENSMUST00000172132.2|Tpi1|ENSMUSG00000023456.8|triosephosphate isomerase 1
mm10_v2_chr10_-_80320506_80320553	4.88024	Pitx2_Otx2	ENSMUST00000020341.8|2310011J03Rik|ENSMUSG00000020133.8|RIKEN cDNA 2310011J03 gene
mm10_v2_chr11_-_84068766_84068801	4.83769	Pitx2_Otx2	ENSMUST00000018792.5|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr6_-_23248264_23248390	4.6912	Pitx2_Otx2	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr11_-_106999369_106999473	4.66639	Pitx2_Otx2	ENSMUST00000106768.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2 	ENSMUST00000144834.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr2_+_157737401_157737490	4.64919	Pitx2_Otx2	ENSMUST00000029178.6|Ctnnbl1|ENSMUSG00000027649.9|catenin, beta like 1
mm10_v2_chr11_-_73138245_73138310	4.60138	Pitx2_Otx2	ENSMUST00000052140.2|Gsg2|ENSMUSG00000050107.2|germ cell-specific gene 2
mm10_v2_chr2_-_34913976_34914043	4.59009	Pitx2_Otx2	ENSMUST00000028232.3|Phf19|ENSMUSG00000026873.3|PHD finger protein 19
mm10_v2_chr14_+_27039001_27039050	4.57943	Pitx2_Otx2	ENSMUST00000035336.3|Il17rd|ENSMUSG00000040717.5|interleukin 17 receptor D
mm10_v2_chr17_-_25727364_25727426	4.57888	Pitx2_Otx2	ENSMUST00000170070.1|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18 	ENSMUST00000048054.7|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18
mm10_v2_chr11_+_101442298_101442439	4.52326	Pitx2_Otx2	ENSMUST00000077856.6|Rpl27|ENSMUSG00000063316.7|ribosomal protein L27
mm10_v2_chr3_-_115715031_115715062	4.48802	Pitx2_Otx2	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr14_+_67745229_67745269	4.48727	Pitx2_Otx2	ENSMUST00000111095.2|Gnrh1|ENSMUSG00000015812.7|gonadotropin releasing hormone 1
mm10_v2_chr3_-_97610156_97610222	4.47916	Pitx2_Otx2	ENSMUST00000029730.4|Chd1l|ENSMUSG00000028089.4|chromodomain helicase DNA binding protein 1-like
mm10_v2_chr2_+_174415804_174415871	4.45214	Pitx2_Otx2	ENSMUST00000109075.1|Nelfcd|ENSMUSG00000016253.6|negative elongation factor complex member C/D, Th1l 	ENSMUST00000016397.6|Nelfcd|ENSMUSG00000016253.6|negative elongation factor complex member C/D, Th1l
mm10_v2_chr3_-_153912966_153912990	4.44653	Pitx2_Otx2	ENSMUST00000089950.4|Rabggtb|ENSMUSG00000038975.8|RAB geranylgeranyl transferase, b subunit
mm10_v2_chr15_-_102667749_102667749	4.42734	Pitx2_Otx2	ENSMUST00000075630.3|Atp5g2|ENSMUSG00000062683.5|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)
mm10_v2_chr1_+_92906959_92907036	4.40452	Pitx2_Otx2	ENSMUST00000060913.6|Dusp28|ENSMUSG00000047067.6|dual specificity phosphatase 28
mm10_v2_chr15_+_80948484_80948549	4.39856	Pitx2_Otx2	ENSMUST00000023043.2|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000168756.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000164806.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase
mm10_v2_chr7_-_118116128_118116167	4.38078	Pitx2_Otx2	ENSMUST00000128482.1|Rps15a|ENSMUSG00000008683.10|ribosomal protein S15A 	ENSMUST00000131840.1|Rps15a|ENSMUSG00000008683.10|ribosomal protein S15A
mm10_v2_chr19_-_41896132_41896155	4.31514	Pitx2_Otx2	ENSMUST00000038677.3|Rrp12|ENSMUSG00000035049.3|ribosomal RNA processing 12 homolog (S. cerevisiae)
mm10_v2_chr1_-_119648903_119649000	4.20324	Pitx2_Otx2	ENSMUST00000163147.1|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000052404.6|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000027632.7|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5
mm10_v2_chr16_-_4719078_4719126	4.17206	Pitx2_Otx2	ENSMUST00000120056.1|Nmral1|ENSMUSG00000063445.8|NmrA-like family domain containing 1 	ENSMUST00000074970.7|Nmral1|ENSMUSG00000063445.8|NmrA-like family domain containing 1
mm10_v2_chr7_-_38107490_38107534	4.16574	Pitx2_Otx2	ENSMUST00000108023.3|Ccne1|ENSMUSG00000002068.10|cyclin E1
mm10_v2_chr6_-_72235559_72235618	4.1308	Pitx2_Otx2	ENSMUST00000042646.7|Atoh8|ENSMUSG00000037621.7|atonal homolog 8 (Drosophila)
mm10_v2_chr15_+_99006056_99006056	4.12912	Pitx2_Otx2	ENSMUST00000079818.3|Gm8973|ENSMUSG00000064081.3|predicted gene 8973
mm10_v2_chr14_+_47472547_47472625	4.12617	Pitx2_Otx2	ENSMUST00000168833.1|Fbxo34|ENSMUSG00000037536.7|F-box protein 34 	ENSMUST00000163324.1|Fbxo34|ENSMUSG00000037536.7|F-box protein 34 	ENSMUST00000043112.7|Fbxo34|ENSMUSG00000037536.7|F-box protein 34
mm10_v2_chr9_-_114982739_114982742	4.11784	Pitx2_Otx2	ENSMUST00000053150.5|Gm9846|ENSMUSG00000050621.5|predicted gene 9846
mm10_v2_chr10_+_82954344_82954344	4.11442	Pitx2_Otx2	ENSMUST00000095396.3|Gm4799|ENSMUSG00000071151.3|predicted gene 4799
mm10_v2_chr5_+_137778849_137778935	4.10252	Pitx2_Otx2	ENSMUST00000126126.1|Ppp1r35|ENSMUSG00000029725.4|protein phosphatase 1, regulatory subunit 35 	ENSMUST00000031739.4|Ppp1r35|ENSMUSG00000029725.4|protein phosphatase 1, regulatory subunit 35
mm10_v2_chr8_+_85026833_85026899	4.09879	Pitx2_Otx2	ENSMUST00000047281.8|2310036O22Rik|ENSMUSG00000041203.8|RIKEN cDNA 2310036O22 gene
mm10_v2_chr7_-_143460989_143461050	4.09601	Pitx2_Otx2	ENSMUST00000167912.1|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57) 	ENSMUST00000037287.6|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57)
mm10_v2_chr11_+_115403734_115403777	4.05499	Pitx2_Otx2	ENSMUST00000153983.1|Ict1|ENSMUSG00000018858.9|immature colon carcinoma transcript 1 	ENSMUST00000106539.3|Ict1|ENSMUSG00000018858.9|immature colon carcinoma transcript 1 	ENSMUST00000103036.4|Ict1|ENSMUSG00000018858.9|immature colon carcinoma transcript 1
mm10_v2_chr10_+_80292453_80292645	4.04841	Pitx2_Otx2	ENSMUST00000068408.7|Rps15|ENSMUSG00000063457.8|ribosomal protein S15 	ENSMUST00000062674.6|Rps15|ENSMUSG00000063457.8|ribosomal protein S15
mm10_v2_chr19_+_6061176_6061235	4.04529	Pitx2_Otx2	ENSMUST00000162726.3|Znhit2|ENSMUSG00000075227.5|zinc finger, HIT domain containing 2
mm10_v2_chr1_-_153549697_153549724	4.04521	Pitx2_Otx2	ENSMUST00000041874.7|Npl|ENSMUSG00000042684.7|N-acetylneuraminate pyruvate lyase
mm10_v2_chr11_+_44617310_44617336	4.0076	Pitx2_Otx2	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr17_-_70924958_70925003	4.00412	Pitx2_Otx2	ENSMUST00000180468.1|Gm26510|ENSMUSG00000097154.1|predicted gene, 26510
mm10_v2_chr6_+_42349826_42349837	3.97582	Pitx2_Otx2	ENSMUST00000070635.6|Zyx|ENSMUSG00000029860.10|zyxin
mm10_v2_chr17_+_24426676_24426701	3.96832	Pitx2_Otx2	ENSMUST00000024946.5|Eci1|ENSMUSG00000024132.5|enoyl-Coenzyme A delta isomerase 1
mm10_v2_chr19_+_37376359_37376422	3.96404	Pitx2_Otx2	ENSMUST00000012587.3|Kif11|ENSMUSG00000012443.3|kinesin family member 11
mm10_v2_chr7_-_144738520_144738597	3.94876	Pitx2_Otx2	ENSMUST00000118556.2|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel 	ENSMUST00000033393.8|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr6_-_124779686_124779742	3.94211	Pitx2_Otx2	ENSMUST00000147669.1|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000128697.1|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000032218.3|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000112475.2|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23
mm10_v2_chr11_+_61956779_61956791	3.93955	Pitx2_Otx2	ENSMUST00000049836.7|Specc1|ENSMUSG00000042331.7|sperm antigen with calponin homology and coiled-coil domains 1
mm10_v2_chr16_-_4719148_4719164	3.92283	Pitx2_Otx2	ENSMUST00000115851.3|Nmral1|ENSMUSG00000063445.8|NmrA-like family domain containing 1
mm10_v2_chr17_-_25880236_25880305	3.90123	Pitx2_Otx2	ENSMUST00000176696.1|Wfikkn1|ENSMUSG00000071192.5|WAP, FS, Ig, KU, and NTR-containing protein 1 	ENSMUST00000095487.5|Wfikkn1|ENSMUSG00000071192.5|WAP, FS, Ig, KU, and NTR-containing protein 1
mm10_v2_chr6_+_42350000_42350076	3.89281	Pitx2_Otx2	ENSMUST00000164375.1|Zyx|ENSMUSG00000029860.10|zyxin
mm10_v2_chr14_-_8309770_8309795	3.88872	Pitx2_Otx2	ENSMUST00000121887.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000036070.8|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000137133.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A
mm10_v2_chr8_-_105707933_105707933	3.88332	Pitx2_Otx2	ENSMUST00000013299.9|Enkd1|ENSMUSG00000013155.9|enkurin domain containing 1
mm10_v2_chr11_-_120796369_120796405	3.83153	Pitx2_Otx2	ENSMUST00000143139.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000129955.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000026151.4|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000167023.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000106133.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000106135.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae)
mm10_v2_chr6_+_83349446_83349496	3.82677	Pitx2_Otx2	ENSMUST00000136501.1|Bola3|ENSMUSG00000045160.8|bolA-like 3 (E. coli)
mm10_v2_chr7_-_34812677_34812693	3.81469	Pitx2_Otx2	ENSMUST00000078686.6|Chst8|ENSMUSG00000060402.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
mm10_v2_chr11_-_5152218_5152272	3.79301	Pitx2_Otx2	ENSMUST00000163299.1|Emid1|ENSMUSG00000034164.11|EMI domain containing 1 	ENSMUST00000062821.6|Emid1|ENSMUSG00000034164.11|EMI domain containing 1
mm10_v2_chr16_+_59471775_59471861	3.74594	Pitx2_Otx2	ENSMUST00000023407.5|Mina|ENSMUSG00000022724.9|myc induced nuclear antigen 	ENSMUST00000120667.1|Mina|ENSMUSG00000022724.9|myc induced nuclear antigen 	ENSMUST00000120674.1|Mina|ENSMUSG00000022724.9|myc induced nuclear antigen
mm10_v2_chr4_-_116994374_116994413	3.72907	Pitx2_Otx2	ENSMUST00000030446.8|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr4_-_15945359_15945507	3.71196	Pitx2_Otx2	ENSMUST00000029877.8|Decr1|ENSMUSG00000028223.8|2,4-dienoyl CoA reductase 1, mitochondrial
mm10_v2_chr19_+_34922351_34922404	3.68296	Pitx2_Otx2	ENSMUST00000087341.5|Kif20b|ENSMUSG00000024795.10|kinesin family member 20B
mm10_v2_chr5_+_134582690_134582727	3.67795	Pitx2_Otx2	ENSMUST00000023867.6|Rfc2|ENSMUSG00000023104.6|replication factor C (activator 1) 2
mm10_v2_chr7_+_16891755_16891800	3.65709	Pitx2_Otx2	ENSMUST00000078182.4|Gng8|ENSMUSG00000063594.4|guanine nucleotide binding protein (G protein), gamma 8
mm10_v2_chr12_-_69159109_69159186	3.60904	Pitx2_Otx2	ENSMUST00000037023.8|Rps29|ENSMUSG00000034892.8|ribosomal protein S29
mm10_v2_chr4_-_130279205_130279231	3.53307	Pitx2_Otx2	ENSMUST00000120126.2|Serinc2|ENSMUSG00000023232.11|serine incorporator 2
mm10_v2_chr2_-_28466266_28466359	3.50218	Pitx2_Otx2	ENSMUST00000127683.1|1700007K13Rik|ENSMUSG00000026831.10|RIKEN cDNA 1700007K13 gene 	ENSMUST00000086370.4|1700007K13Rik|ENSMUSG00000026831.10|RIKEN cDNA 1700007K13 gene
mm10_v2_chr16_+_38902305_38902316	3.49965	Pitx2_Otx2	ENSMUST00000023478.7|Igsf11|ENSMUSG00000022790.7|immunoglobulin superfamily, member 11
mm10_v2_chr9_-_27155418_27155425	3.49728	Pitx2_Otx2	ENSMUST00000167074.1|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3 	ENSMUST00000034472.8|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3
mm10_v2_chr7_-_118584669_118584741	3.48895	Pitx2_Otx2	ENSMUST00000044195.4|Tmc7|ENSMUSG00000042246.4|transmembrane channel-like gene family 7
mm10_v2_chr5_+_74195281_74195294	3.47615	Pitx2_Otx2	ENSMUST00000051937.7|Rasl11b|ENSMUSG00000049907.7|RAS-like, family 11, member B
mm10_v2_chr4_+_89137122_89137122	3.46607	Pitx2_Otx2	ENSMUST00000058030.7|Mtap|ENSMUSG00000062937.5|methylthioadenosine phosphorylase
mm10_v2_chr16_+_38562806_38562819	3.39875	Pitx2_Otx2	ENSMUST00000171687.1|Tmem39a|ENSMUSG00000002845.8|transmembrane protein 39a 	ENSMUST00000002924.8|Tmem39a|ENSMUSG00000002845.8|transmembrane protein 39a
mm10_v2_chr4_+_62559825_62559847	3.3884	Pitx2_Otx2	ENSMUST00000065870.7|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3
mm10_v2_chr8_+_70152754_70152781	3.36458	Pitx2_Otx2	ENSMUST00000072500.6|2310045N01Rik|ENSMUSG00000002345.11|RIKEN cDNA 2310045N01 gene 	ENSMUST00000164040.1|2310045N01Rik|ENSMUSG00000002345.11|RIKEN cDNA 2310045N01 gene 	ENSMUST00000110146.2|Mef2b|ENSMUSG00000079033.3|myocyte enhancer factor 2B 	ENSMUST00000110143.1|Mef2b|ENSMUSG00000079033.3|myocyte enhancer factor 2B 	ENSMUST00000110141.2|Mef2b|ENSMUSG00000079033.3|myocyte enhancer factor 2B 	ENSMUST00000110140.1|Mef2b|ENSMUSG00000079033.3|myocyte enhancer factor 2B
mm10_v2_chr8_-_71511762_71511778	3.36003	Pitx2_Otx2	ENSMUST00000048452.4|Plvap|ENSMUSG00000034845.5|plasmalemma vesicle associated protein
mm10_v2_chr4_+_115000156_115000170	3.35209	Pitx2_Otx2	ENSMUST00000030490.6|Stil|ENSMUSG00000028718.10|Scl/Tal1 interrupting locus
mm10_v2_chr19_-_47919269_47919305	3.33725	Pitx2_Otx2	ENSMUST00000095998.5|Itprip|ENSMUSG00000079254.3|inositol 1,4,5-triphosphate receptor interacting protein
mm10_v2_chr1_-_139377041_139377078	3.33672	Pitx2_Otx2	ENSMUST00000059825.5|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chr5_-_25705791_25705829	3.32996	Pitx2_Otx2	ENSMUST00000030773.7|Xrcc2|ENSMUSG00000028933.7|X-ray repair complementing defective repair in Chinese hamster cells 2
mm10_v2_chr7_-_126792469_126792478	3.30327	Pitx2_Otx2	ENSMUST00000032936.6|Ppp4c|ENSMUSG00000030697.6|protein phosphatase 4, catalytic subunit
mm10_v2_chr4_-_116994354_116994372	3.29973	Pitx2_Otx2	ENSMUST00000130273.1|Urod|ENSMUSG00000028684.8|uroporphyrinogen decarboxylase
mm10_v2_chr6_+_34354119_34354151	3.29632	Pitx2_Otx2	ENSMUST00000038406.6|Akr1b8|ENSMUSG00000029762.6|aldo-keto reductase family 1, member B8
mm10_v2_chr6_+_149582012_149582012	3.26136	Pitx2_Otx2	ENSMUST00000144085.2|Gm21814|ENSMUSG00000096299.1|predicted gene, 21814
mm10_v2_chr17_-_35673738_35673750	3.2461	Pitx2_Otx2	ENSMUST00000001565.8|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chr7_+_102225812_102225823	3.2249	Pitx2_Otx2	ENSMUST00000142873.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2
mm10_v2_chr2_-_151973840_151973966	3.22334	Pitx2_Otx2	ENSMUST00000109865.1|Fam110a|ENSMUSG00000027459.10|family with sequence similarity 110, member A 	ENSMUST00000109864.1|Fam110a|ENSMUSG00000027459.10|family with sequence similarity 110, member A
mm10_v2_chr14_+_74735641_74735663	3.18687	Pitx2_Otx2	ENSMUST00000177283.1|Esd|ENSMUSG00000021996.10|esterase D/formylglutathione hydrolase
mm10_v2_chr15_-_76639840_76639958	3.1821	Pitx2_Otx2	ENSMUST00000166974.1|Tonsl|ENSMUSG00000059323.7|tonsoku-like, DNA repair protein 	ENSMUST00000168185.1|Tonsl|ENSMUSG00000059323.7|tonsoku-like, DNA repair protein
mm10_v2_chr8_+_70673198_70673267	3.18206	Pitx2_Otx2	ENSMUST00000034311.8|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr5_-_44099220_44099237	3.17624	Pitx2_Otx2	ENSMUST00000165909.1|Prom1|ENSMUSG00000029086.9|prominin 1
mm10_v2_chr15_-_36308956_36308956	3.17613	Pitx2_Otx2	ENSMUST00000090170.4|Rpl7a-ps3|ENSMUSG00000068579.4|ribosomal protein L7A, pseudogene 3
mm10_v2_chr14_+_7817957_7817994	3.16255	Pitx2_Otx2	ENSMUST00000052678.8|Flnb|ENSMUSG00000025278.8|filamin, beta
mm10_v2_chr7_-_144738478_144738508	3.15333	Pitx2_Otx2	ENSMUST00000121758.1|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr9_-_20898592_20898631	3.14814	Pitx2_Otx2	ENSMUST00000004206.8|Eif3g|ENSMUSG00000070319.5|eukaryotic translation initiation factor 3, subunit G
mm10_v2_chr11_-_84068357_84068367	3.14764	Pitx2_Otx2	ENSMUST00000100705.4|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr5_-_4758216_4758216	3.13882	Pitx2_Otx2	ENSMUST00000054294.4|Fzd1|ENSMUSG00000044674.4|frizzled homolog 1 (Drosophila)
mm10_v2_chr6_-_120357422_120357435	3.13731	Pitx2_Otx2	ENSMUST00000032283.5|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr17_+_29090969_29091020	3.12654	Pitx2_Otx2	ENSMUST00000119901.1|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr5_+_107900502_107900577	3.11297	Pitx2_Otx2	ENSMUST00000082223.6|Rpl5|ENSMUSG00000058558.6|ribosomal protein L5
mm10_v2_chr10_-_130280218_130280242	3.09968	Pitx2_Otx2	ENSMUST00000061571.3|Neurod4|ENSMUSG00000048015.3|neurogenic differentiation 4
mm10_v2_chr5_-_8422582_8422693	3.08994	Pitx2_Otx2	ENSMUST00000168500.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae) 	ENSMUST00000002368.9|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr16_-_88056176_88056176	3.05836	Pitx2_Otx2	ENSMUST00000072256.5|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000023652.8|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000114137.1|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1
mm10_v2_chrM_+_8600_8616	3.05729	Pitx2_Otx2	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr11_-_58801944_58801968	3.05508	Pitx2_Otx2	ENSMUST00000094156.4|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B 	ENSMUST00000060581.3|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B
mm10_v2_chr14_+_52110939_52110953	3.02762	Pitx2_Otx2	ENSMUST00000111600.4|Rpgrip1|ENSMUSG00000057132.9|retinitis pigmentosa GTPase regulator interacting protein 1
mm10_v2_chr16_+_32419696_32419753	3.02742	Pitx2_Otx2	ENSMUST00000014220.8|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2 	ENSMUST00000080316.7|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2
mm10_v2_chr3_+_95111013_95111087	3.02731	Pitx2_Otx2	ENSMUST00000009102.8|Vps72|ENSMUSG00000008958.8|vacuolar protein sorting 72 (yeast)
mm10_v2_chr7_+_27486910_27486960	3.02643	Pitx2_Otx2	ENSMUST00000008528.7|Sertad1|ENSMUSG00000008384.8|SERTA domain containing 1
mm10_v2_chr3_-_90243073_90243143	3.02475	Pitx2_Otx2	ENSMUST00000107369.1|Creb3l4|ENSMUSG00000027938.5|cAMP responsive element binding protein 3-like 4
mm10_v2_chr7_-_122101735_122101886	3.01372	Pitx2_Otx2	ENSMUST00000139456.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000106471.2|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000123296.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000033157.3|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm10_v2_chr13_-_119408985_119409003	3.01062	Pitx2_Otx2	ENSMUST00000099149.3|Nnt|ENSMUSG00000025453.10|nicotinamide nucleotide transhydrogenase 	ENSMUST00000069902.6|Nnt|ENSMUSG00000025453.10|nicotinamide nucleotide transhydrogenase 	ENSMUST00000109204.1|Nnt|ENSMUSG00000025453.10|nicotinamide nucleotide transhydrogenase
mm10_v2_chrX_-_53269786_53269858	3.01039	Pitx2_Otx2	ENSMUST00000114841.1|Fam122b|ENSMUSG00000036022.9|family with sequence similarity 122, member B 	ENSMUST00000071023.5|Fam122b|ENSMUSG00000036022.9|family with sequence similarity 122, member B
mm10_v2_chr5_-_8422695_8422727	2.99456	Pitx2_Otx2	ENSMUST00000171808.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr1_-_128102412_128102485	2.98432	Pitx2_Otx2	ENSMUST00000112538.1|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3 	ENSMUST00000086614.5|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3
mm10_v2_chr7_+_46841475_46841538	2.9668	Pitx2_Otx2	ENSMUST00000147535.1|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr11_-_120727226_120727292	2.93784	Pitx2_Otx2	ENSMUST00000106148.3|Dcxr|ENSMUSG00000039450.5|dicarbonyl L-xylulose reductase 	ENSMUST00000026144.4|Dcxr|ENSMUSG00000039450.5|dicarbonyl L-xylulose reductase
mm10_v2_chr7_-_118995211_118995219	2.9198	Pitx2_Otx2	ENSMUST00000008878.8|Gprc5b|ENSMUSG00000008734.8|G protein-coupled receptor, family C, group 5, member B
mm10_v2_chr9_-_96478660_96478675	2.91712	Pitx2_Otx2	ENSMUST00000057500.4|Rnf7|ENSMUSG00000051234.5|ring finger protein 7
mm10_v2_chr16_+_38562821_38562861	2.88693	Pitx2_Otx2	ENSMUST00000163948.1|Tmem39a|ENSMUSG00000002845.8|transmembrane protein 39a
mm10_v2_chr15_+_76904070_76904092	2.874	Pitx2_Otx2	ENSMUST00000004072.8|Rpl8|ENSMUSG00000003970.8|ribosomal protein L8
mm10_v2_chr9_-_44344159_44344228	2.8732	Pitx2_Otx2	ENSMUST00000077353.7|Hmbs|ENSMUSG00000032126.9|hydroxymethylbilane synthase
mm10_v2_chr14_+_73173825_73173884	2.86949	Pitx2_Otx2	ENSMUST00000166875.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr5_+_135725713_135725740	2.8573	Pitx2_Otx2	ENSMUST00000127096.1|Por|ENSMUSG00000005514.8|P450 (cytochrome) oxidoreductase
mm10_v2_chr9_-_96478596_96478622	2.85573	Pitx2_Otx2	ENSMUST00000071301.4|Rnf7|ENSMUSG00000051234.5|ring finger protein 7
mm10_v2_chr10_-_80406811_80406830	2.84172	Pitx2_Otx2	ENSMUST00000020372.5|Uqcr11|ENSMUSG00000020163.6|ubiquinol-cytochrome c reductase, complex III subunit XI
mm10_v2_chr7_-_100514800_100514960	2.82312	Pitx2_Otx2	ENSMUST00000054923.7|Dnajb13|ENSMUSG00000030708.7|DnaJ (Hsp40) related, subfamily B, member 13
mm10_v2_chr11_+_69995874_69995897	2.81668	Pitx2_Otx2	ENSMUST00000101526.2|Phf23|ENSMUSG00000018572.4|PHD finger protein 23
mm10_v2_chr8_+_84901928_84901992	2.81576	Pitx2_Otx2	ENSMUST00000067060.7|Klf1|ENSMUSG00000054191.7|Kruppel-like factor 1 (erythroid)
mm10_v2_chr1_-_93342734_93342803	2.81373	Pitx2_Otx2	ENSMUST00000027493.3|Pask|ENSMUSG00000026274.5|PAS domain containing serine/threonine kinase
mm10_v2_chr6_-_134792596_134792682	2.80662	Pitx2_Otx2	ENSMUST00000100857.3|Dusp16|ENSMUSG00000030203.11|dual specificity phosphatase 16
mm10_v2_chr14_-_25927672_25927672	2.78433	Pitx2_Otx2	ENSMUST00000185006.1|Tmem254a|ENSMUSG00000072676.5|transmembrane protein 254a
mm10_v2_chr4_+_108579445_108579470	2.783	Pitx2_Otx2	ENSMUST00000102744.3|Orc1|ENSMUSG00000028587.12|origin recognition complex, subunit 1
mm10_v2_chr6_+_113531675_113531721	2.78184	Pitx2_Otx2	ENSMUST00000036340.5|Fancd2|ENSMUSG00000034023.10|Fanconi anemia, complementation group D2 	ENSMUST00000101051.2|Fancd2|ENSMUSG00000034023.10|Fanconi anemia, complementation group D2
mm10_v2_chr11_+_32205411_32205481	2.7498	Pitx2_Otx2	ENSMUST00000039601.3|Snrnp25|ENSMUSG00000040767.4|small nuclear ribonucleoprotein 25 (U11/U12) 	ENSMUST00000149043.1|Snrnp25|ENSMUSG00000040767.4|small nuclear ribonucleoprotein 25 (U11/U12)
mm10_v2_chr9_-_107635330_107635353	2.74496	Pitx2_Otx2	ENSMUST00000055704.6|Gnai2|ENSMUSG00000032562.8|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm10_v2_chr11_+_69995777_69995870	2.73738	Pitx2_Otx2	ENSMUST00000018716.3|Phf23|ENSMUSG00000018572.4|PHD finger protein 23
mm10_v2_chr8_+_70131327_70131392	2.72974	Pitx2_Otx2	ENSMUST00000095273.5|Nr2c2ap|ENSMUSG00000071078.5|nuclear receptor 2C2-associated protein
mm10_v2_chr7_+_45163915_45163926	2.72629	Pitx2_Otx2	ENSMUST00000085374.5|Slc17a7|ENSMUSG00000070570.4|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm10_v2_chr7_+_66060338_66060338	2.72529	Pitx2_Otx2	ENSMUST00000153609.1|Snrpa1|ENSMUSG00000030512.7|small nuclear ribonucleoprotein polypeptide A'
mm10_v2_chr10_-_81266906_81266934	2.7142	Pitx2_Otx2	ENSMUST00000046114.4|Mrpl54|ENSMUSG00000034932.4|mitochondrial ribosomal protein L54
mm10_v2_chr4_+_136143497_136143497	2.68531	Pitx2_Otx2	ENSMUST00000008016.2|Id3|ENSMUSG00000007872.3|inhibitor of DNA binding 3
mm10_v2_chr3_-_138131356_138131381	2.66239	Pitx2_Otx2	ENSMUST00000029805.8|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr6_-_120357440_120357489	2.65104	Pitx2_Otx2	ENSMUST00000112703.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr11_-_68973840_68973864	2.64283	Pitx2_Otx2	ENSMUST00000038644.4|Rangrf|ENSMUSG00000032892.8|RAN guanine nucleotide release factor
mm10_v2_chr3_+_122924353_122924402	2.63677	Pitx2_Otx2	ENSMUST00000106429.3|1810037I17Rik|ENSMUSG00000054091.7|RIKEN cDNA 1810037I17 gene
mm10_v2_chr11_+_101448403_101448487	2.63514	Pitx2_Otx2	ENSMUST00000010502.6|Ifi35|ENSMUSG00000010358.7|interferon-induced protein 35
mm10_v2_chr9_+_64121501_64121606	2.62304	Pitx2_Otx2	ENSMUST00000118215.1|Lctl|ENSMUSG00000032401.9|lactase-like
mm10_v2_chr5_+_140331860_140331954	2.62055	Pitx2_Otx2	ENSMUST00000071881.3|Nudt1|ENSMUSG00000036639.6|nudix (nucleoside diphosphate linked moiety X)-type motif 1 	ENSMUST00000050205.5|Nudt1|ENSMUSG00000036639.6|nudix (nucleoside diphosphate linked moiety X)-type motif 1 	ENSMUST00000110827.1|Nudt1|ENSMUSG00000036639.6|nudix (nucleoside diphosphate linked moiety X)-type motif 1
mm10_v2_chr11_+_96789149_96789206	2.59574	Pitx2_Otx2	ENSMUST00000093943.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr4_+_155704789_155704834	2.595	Pitx2_Otx2	ENSMUST00000030905.2|Ssu72|ENSMUSG00000029038.3|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm10_v2_chr4_+_41135743_41135898	2.588	Pitx2_Otx2	ENSMUST00000040008.3|Ube2r2|ENSMUSG00000036241.3|ubiquitin-conjugating enzyme E2R 2
mm10_v2_chr9_+_110656494_110656544	2.56843	Pitx2_Otx2	ENSMUST00000019803.4|Ccdc12|ENSMUSG00000019659.4|coiled-coil domain containing 12
mm10_v2_chr5_+_99979061_99979061	2.56169	Pitx2_Otx2	ENSMUST00000046721.1|4930524J08Rik|ENSMUSG00000035364.1|RIKEN cDNA 4930524J08 gene
mm10_v2_chr17_+_80224441_80224493	2.55992	Pitx2_Otx2	ENSMUST00000069486.6|Gemin6|ENSMUSG00000055760.6|gem (nuclear organelle) associated protein 6
mm10_v2_chr7_-_101903783_101903786	2.54086	Pitx2_Otx2	ENSMUST00000106969.1|Tomt|ENSMUSG00000078630.1|transmembrane O-methyltransferase
mm10_v2_chr8_+_122376676_122376701	2.53703	Pitx2_Otx2	ENSMUST00000176629.1|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18
mm10_v2_chr11_+_51619731_51619813	2.53473	Pitx2_Otx2	ENSMUST00000127405.1|Nhp2|ENSMUSG00000001056.3|NHP2 ribonucleoprotein
mm10_v2_chr10_-_87493651_87493666	2.5236	Pitx2_Otx2	ENSMUST00000020243.7|Ascl1|ENSMUSG00000020052.7|achaete-scute complex homolog 1 (Drosophila)
mm10_v2_chr11_+_100574904_100574982	2.51142	Pitx2_Otx2	ENSMUST00000103120.4|Cnp|ENSMUSG00000006782.10|2',3'-cyclic nucleotide 3' phosphodiesterase
mm10_v2_chr4_+_98546710_98546739	2.48684	Pitx2_Otx2	ENSMUST00000102792.3|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr7_-_100662414_100662440	2.47675	Pitx2_Otx2	ENSMUST00000079176.6|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1
mm10_v2_chr11_-_48826655_48826655	2.47513	Pitx2_Otx2	ENSMUST00000104959.1|Gm12184|ENSMUSG00000078154.2|predicted gene 12184
mm10_v2_chr2_-_118762607_118762666	2.47329	Pitx2_Otx2	ENSMUST00000059997.8|A430105I19Rik|ENSMUSG00000045838.8|RIKEN cDNA A430105I19 gene
mm10_v2_chr5_-_139460501_139460549	2.46702	Pitx2_Otx2	ENSMUST00000066052.7|3110082I17Rik|ENSMUSG00000053553.7|RIKEN cDNA 3110082I17 gene
mm10_v2_chr15_-_5121172_5121194	2.46395	Pitx2_Otx2	ENSMUST00000090488.2|Gm10250|ENSMUSG00000068706.2|predicted pseudogene 10250
mm10_v2_chr7_-_100662315_100662365	2.46089	Pitx2_Otx2	ENSMUST00000151123.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1 	ENSMUST00000107047.2|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1
mm10_v2_chr2_-_118256929_118256973	2.45799	Pitx2_Otx2	ENSMUST00000028820.6|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1 	ENSMUST00000028821.3|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1
mm10_v2_chr11_-_98625661_98625661	2.44604	Pitx2_Otx2	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr9_+_103305156_103305255	2.40964	Pitx2_Otx2	ENSMUST00000035164.3|Topbp1|ENSMUSG00000032555.3|topoisomerase (DNA) II binding protein 1
mm10_v2_chr5_-_121618865_121618938	2.40926	Pitx2_Otx2	ENSMUST00000041252.6|Acad12|ENSMUSG00000042647.7|acyl-Coenzyme A dehydrogenase family, member 12 	ENSMUST00000111776.1|Acad12|ENSMUSG00000042647.7|acyl-Coenzyme A dehydrogenase family, member 12
mm10_v2_chr4_+_154011731_154011818	2.40294	Pitx2_Otx2	ENSMUST00000169622.1|Lrrc47|ENSMUSG00000029028.8|leucine rich repeat containing 47 	ENSMUST00000030894.8|Lrrc47|ENSMUSG00000029028.8|leucine rich repeat containing 47
mm10_v2_chr4_+_41762309_41762351	2.40213	Pitx2_Otx2	ENSMUST00000108042.2|Il11ra1|ENSMUSG00000073889.4|interleukin 11 receptor, alpha chain 1
mm10_v2_chr3_+_90248172_90248228	2.36486	Pitx2_Otx2	ENSMUST00000015467.8|Slc39a1|ENSMUSG00000052310.9|solute carrier family 39 (zinc transporter), member 1
mm10_v2_chr11_-_116274102_116274138	2.35389	Pitx2_Otx2	ENSMUST00000106425.3|Srp68|ENSMUSG00000020780.9|signal recognition particle 68
mm10_v2_chr10_+_78393298_78393309	2.35027	Pitx2_Otx2	ENSMUST00000072739.4|Gm10146|ENSMUSG00000064317.4|predicted gene 10146
mm10_v2_chr9_-_21149894_21149978	2.34966	Pitx2_Otx2	ENSMUST00000019615.9|Cdc37|ENSMUSG00000019471.9|cell division cycle 37
mm10_v2_chr5_-_125294107_125294136	2.34058	Pitx2_Otx2	ENSMUST00000127148.1|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1
mm10_v2_chr18_-_20682963_20683006	2.33326	Pitx2_Otx2	ENSMUST00000165229.2|Gm10269|ENSMUSG00000091449.2|predicted gene 10269
mm10_v2_chr4_+_115000174_115000189	2.32883	Pitx2_Otx2	ENSMUST00000129957.1|Stil|ENSMUSG00000028718.10|Scl/Tal1 interrupting locus
mm10_v2_chr19_+_33822908_33822908	2.32792	Pitx2_Otx2	ENSMUST00000042061.6|Gm5519|ENSMUSG00000037603.6|predicted pseudogene 5519
mm10_v2_chr5_-_110780569_110780659	2.31858	Pitx2_Otx2	ENSMUST00000149208.1|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1 	ENSMUST00000031483.8|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1 	ENSMUST00000086643.5|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1 	ENSMUST00000170468.1|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1 	ENSMUST00000031481.6|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1
mm10_v2_chr11_+_96789213_96789249	2.31402	Pitx2_Otx2	ENSMUST00000079702.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr8_-_70510552_70510584	2.30927	Pitx2_Otx2	ENSMUST00000125184.1|Uba52|ENSMUSG00000090137.2|ubiquitin A-52 residue ribosomal protein fusion product 1
mm10_v2_chr8_-_107439585_107439593	2.29923	Pitx2_Otx2	ENSMUST00000077208.4|Rps26-ps1|ENSMUSG00000059775.4|ribosomal protein S26, pseudogene 1
mm10_v2_chr2_+_91054009_91054038	2.27691	Pitx2_Otx2	ENSMUST00000067663.7|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm10_v2_chr11_-_93965957_93966043	2.27589	Pitx2_Otx2	ENSMUST00000021220.3|Nme1|ENSMUSG00000037601.5|NME/NM23 nucleoside diphosphate kinase 1
mm10_v2_chr16_+_14906622_14906680	2.27137	Pitx2_Otx2	ENSMUST00000090277.1|Efcab1|ENSMUSG00000068617.4|EF hand calcium binding domain 1
mm10_v2_chr1_-_75219245_75219262	2.26835	Pitx2_Otx2	ENSMUST00000079464.6|Tuba4a|ENSMUSG00000026202.7|tubulin, alpha 4A
mm10_v2_chr11_+_54902743_54902772	2.2514	Pitx2_Otx2	ENSMUST00000082430.3|Gpx3|ENSMUSG00000018339.5|glutathione peroxidase 3
mm10_v2_chr4_+_156109971_156110004	2.25099	Pitx2_Otx2	ENSMUST00000072554.6|9430015G10Rik|ENSMUSG00000059939.7|RIKEN cDNA 9430015G10 gene 	ENSMUST00000169550.1|9430015G10Rik|ENSMUSG00000059939.7|RIKEN cDNA 9430015G10 gene 	ENSMUST00000105576.1|9430015G10Rik|ENSMUSG00000059939.7|RIKEN cDNA 9430015G10 gene
mm10_v2_chr8_-_106573461_106573462	2.24109	Pitx2_Otx2	ENSMUST00000073722.5|Gm10073|ENSMUSG00000060019.5|predicted pseudogene 10073
mm10_v2_chr11_-_116274197_116274217	2.23983	Pitx2_Otx2	ENSMUST00000021133.9|Srp68|ENSMUSG00000020780.9|signal recognition particle 68
mm10_v2_chr2_+_26586607_26586689	2.23626	Pitx2_Otx2	ENSMUST00000174211.1|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7 	ENSMUST00000145575.2|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7 	ENSMUST00000173920.1|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7
mm10_v2_chr12_+_16810940_16810978	2.23576	Pitx2_Otx2	ENSMUST00000020908.7|E2f6|ENSMUSG00000057469.7|E2F transcription factor 6
mm10_v2_chr14_+_121878591_121878728	2.21797	Pitx2_Otx2	ENSMUST00000039803.5|Ubac2|ENSMUSG00000041765.5|ubiquitin associated domain containing 2
mm10_v2_chr3_+_93520473_93520501	2.20162	Pitx2_Otx2	ENSMUST00000029515.4|S100a11|ENSMUSG00000027907.4|S100 calcium binding protein A11 (calgizzarin)
mm10_v2_chr17_+_75178797_75178824	2.19001	Pitx2_Otx2	ENSMUST00000112516.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1 	ENSMUST00000135447.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr4_-_117156144_117156243	2.17958	Pitx2_Otx2	ENSMUST00000102696.4|Rps8|ENSMUSG00000047675.9|ribosomal protein S8
mm10_v2_chr3_-_63899437_63899477	2.15575	Pitx2_Otx2	ENSMUST00000159188.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000177143.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr6_-_120357342_120357400	2.14986	Pitx2_Otx2	ENSMUST00000163827.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr3_+_127791374_127791390	2.14778	Pitx2_Otx2	ENSMUST00000171621.1|Tifa|ENSMUSG00000046688.8|TRAF-interacting protein with forkhead-associated domain
mm10_v2_chr11_-_82829024_82829043	2.14574	Pitx2_Otx2	ENSMUST00000021036.6|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000074515.4|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000103218.2|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr15_+_79670856_79670888	2.13981	Pitx2_Otx2	ENSMUST00000023062.3|Tomm22|ENSMUSG00000022427.3|translocase of outer mitochondrial membrane 22 homolog (yeast)
mm10_v2_chr3_+_81932601_81932634	2.13523	Pitx2_Otx2	ENSMUST00000029649.2|Ctso|ENSMUSG00000028015.2|cathepsin O
mm10_v2_chr15_+_73090392_73090441	2.13369	Pitx2_Otx2	ENSMUST00000134353.1|Chrac1|ENSMUSG00000068391.2|chromatin accessibility complex 1 	ENSMUST00000089765.2|Chrac1|ENSMUSG00000068391.2|chromatin accessibility complex 1
mm10_v2_chr8_-_107263248_107263248	2.1309	Pitx2_Otx2	ENSMUST00000080443.6|Rps18-ps3|ENSMUSG00000057657.3|ribosomal protein S18, pseudogene 3
mm10_v2_chr11_-_102406783_102406955	2.09212	Pitx2_Otx2	ENSMUST00000155104.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39 	ENSMUST00000130436.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39
mm10_v2_chr17_+_75178911_75178961	2.08862	Pitx2_Otx2	ENSMUST00000112514.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr17_+_35067317_35067390	2.08309	Pitx2_Otx2	ENSMUST00000173478.1|Ly6g6c|ENSMUSG00000092586.2|lymphocyte antigen 6 complex, locus G6C 	ENSMUST00000174876.1|Ly6g6c|ENSMUSG00000092586.2|lymphocyte antigen 6 complex, locus G6C
mm10_v2_chr8_+_95825353_95825354	2.0805	Pitx2_Otx2	ENSMUST00000074053.4|Gm10094|ENSMUSG00000061104.4|predicted gene 10094
mm10_v2_chr10_-_63421739_63421739	2.07937	Pitx2_Otx2	ENSMUST00000054760.4|Gm7075|ENSMUSG00000048185.4|predicted gene 7075
mm10_v2_chr14_+_63860290_63860361	2.07872	Pitx2_Otx2	ENSMUST00000022528.4|Pinx1|ENSMUSG00000021958.4|PIN2/TERF1 interacting, telomerase inhibitor 1
mm10_v2_chr2_+_172472512_172472535	2.06966	Pitx2_Otx2	ENSMUST00000029007.2|Fam209|ENSMUSG00000027505.2|family with sequence similarity 209
mm10_v2_chr16_+_35938470_35938489	2.06537	Pitx2_Otx2	ENSMUST00000114878.1|Parp9|ENSMUSG00000022906.9|poly (ADP-ribose) polymerase family, member 9
mm10_v2_chr7_-_140116395_140116476	2.05908	Pitx2_Otx2	ENSMUST00000026538.6|Echs1|ENSMUSG00000025465.6|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
mm10_v2_chr10_+_128747850_128747895	2.05749	Pitx2_Otx2	ENSMUST00000163377.2|Wibg|ENSMUSG00000064030.8|within bgcn homolog (Drosophila)
mm10_v2_chr9_+_114731177_114731234	2.05674	Pitx2_Otx2	ENSMUST00000035007.8|Cmtm6|ENSMUSG00000032434.8|CKLF-like MARVEL transmembrane domain containing 6
mm10_v2_chr11_-_33843526_33843629	2.05538	Pitx2_Otx2	ENSMUST00000065970.5|Kcnip1|ENSMUSG00000053519.9|Kv channel-interacting protein 1 	ENSMUST00000109340.2|Kcnip1|ENSMUSG00000053519.9|Kv channel-interacting protein 1
mm10_v2_chr9_+_54950782_54950797	2.04141	Pitx2_Otx2	ENSMUST00000034848.7|Psma4|ENSMUSG00000032301.7|proteasome (prosome, macropain) subunit, alpha type 4
mm10_v2_chr3_+_28805436_28805521	2.03782	Pitx2_Otx2	ENSMUST00000043867.5|Rpl22l1|ENSMUSG00000039221.5|ribosomal protein L22 like 1
mm10_v2_chr16_+_90831113_90831150	2.03536	Pitx2_Otx2	ENSMUST00000037539.7|Eva1c|ENSMUSG00000039903.10|eva-1 homolog C (C. elegans) 	ENSMUST00000099543.3|Eva1c|ENSMUSG00000039903.10|eva-1 homolog C (C. elegans)
mm10_v2_chr19_+_36083696_36083736	2.03004	Pitx2_Otx2	ENSMUST00000025714.7|Rpp30|ENSMUSG00000024800.7|ribonuclease P/MRP 30 subunit
mm10_v2_chr1_+_38987806_38987827	2.01818	Pitx2_Otx2	ENSMUST00000027247.5|Pdcl3|ENSMUSG00000026078.5|phosducin-like 3
mm10_v2_chr11_-_87108656_87108719	2.01512	Pitx2_Otx2	ENSMUST00000051395.8|Prr11|ENSMUSG00000020493.8|proline rich 11
mm10_v2_chr12_-_111966954_111967017	2.01272	Pitx2_Otx2	ENSMUST00000021719.5|2010107E04Rik|ENSMUSG00000021290.5|RIKEN cDNA 2010107E04 gene
mm10_v2_chr7_-_45128725_45128748	2.00461	Pitx2_Otx2	ENSMUST00000150350.1|Rpl13a|ENSMUSG00000074129.6|ribosomal protein L13A
mm10_v2_chr5_+_73006897_73006916	2.00313	Pitx2_Otx2	ENSMUST00000031127.7|Slc10a4|ENSMUSG00000029219.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
mm10_v2_chr3_-_96197580_96197634	2.00009	Pitx2_Otx2	ENSMUST00000016087.3|Bola1|ENSMUSG00000015943.5|bolA-like 1 (E. coli)
mm10_v2_chr2_-_155582656_155582668	1.99572	Pitx2_Otx2	ENSMUST00000126322.1|Gss|ENSMUSG00000027610.11|glutathione synthetase
mm10_v2_chr2_-_30801698_30801742	1.98462	Pitx2_Otx2	ENSMUST00000050003.8|1700001O22Rik|ENSMUSG00000044320.8|RIKEN cDNA 1700001O22 gene
mm10_v2_chr13_-_8940977_8940977	1.97437	Pitx2_Otx2	ENSMUST00000071184.2|Rpl10a-ps2|ENSMUSG00000061988.2|ribosomal protein L10A, pseudogene 2
mm10_v2_chr11_+_114668524_114668626	1.97359	Pitx2_Otx2	ENSMUST00000106602.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000077915.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000106599.1|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000082092.4|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38
mm10_v2_chr7_-_16387791_16387840	1.97271	Pitx2_Otx2	ENSMUST00000094815.3|Sae1|ENSMUSG00000052833.8|SUMO1 activating enzyme subunit 1
mm10_v2_chr9_+_38718263_38718277	1.97092	Pitx2_Otx2	ENSMUST00000001544.5|Vwa5a|ENSMUSG00000023186.8|von Willebrand factor A domain containing 5A 	ENSMUST00000118144.1|Vwa5a|ENSMUSG00000023186.8|von Willebrand factor A domain containing 5A
mm10_v2_chr17_+_70929006_70929058	1.96231	Pitx2_Otx2	ENSMUST00000092011.6|Gm16519|ENSMUSG00000066983.6|predicted gene, 16519
mm10_v2_chr5_-_88676135_88676186	1.96205	Pitx2_Otx2	ENSMUST00000078945.5|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1
mm10_v2_chr19_-_61297069_61297069	1.95626	Pitx2_Otx2	ENSMUST00000179346.1|Gm21060|ENSMUSG00000095993.1|predicted gene, 21060
mm10_v2_chr11_-_77725281_77725294	1.95453	Pitx2_Otx2	ENSMUST00000078623.4|Cryba1|ENSMUSG00000000724.10|crystallin, beta A1
mm10_v2_chr11_-_116027961_116027978	1.95371	Pitx2_Otx2	ENSMUST00000106454.1|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr11_-_26593920_26593999	1.93879	Pitx2_Otx2	ENSMUST00000078362.6|Vrk2|ENSMUSG00000064090.8|vaccinia related kinase 2 	ENSMUST00000156264.1|Vrk2|ENSMUSG00000064090.8|vaccinia related kinase 2
mm10_v2_chr3_-_121171678_121171717	1.93504	Pitx2_Otx2	ENSMUST00000170781.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000039761.5|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106467.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106466.3|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000164925.2|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3
mm10_v2_chr12_-_85288419_85288438	1.93368	Pitx2_Otx2	ENSMUST00000121930.1|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr3_-_146521396_146521430	1.93139	Pitx2_Otx2	ENSMUST00000029838.6|Rpf1|ENSMUSG00000028187.6|ribosome production factor 1 homolog (S. cerevisiae)
mm10_v2_chr9_-_78489141_78489166	1.91659	Pitx2_Otx2	ENSMUST00000154207.1|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr9_+_87022014_87022179	1.91442	Pitx2_Otx2	ENSMUST00000168529.2|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000174724.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4 	ENSMUST00000173126.1|Cyb5r4|ENSMUSG00000032872.10|cytochrome b5 reductase 4
mm10_v2_chr2_+_121506748_121506792	1.91215	Pitx2_Otx2	ENSMUST00000099473.3|Wdr76|ENSMUSG00000027242.8|WD repeat domain 76 	ENSMUST00000110602.2|Wdr76|ENSMUSG00000027242.8|WD repeat domain 76
mm10_v2_chr15_+_99702278_99702312	1.91206	Pitx2_Otx2	ENSMUST00000023759.4|Smarcd1|ENSMUSG00000023018.4|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm10_v2_chr7_-_118116171_118116198	1.91093	Pitx2_Otx2	ENSMUST00000131374.1|Rps15a|ENSMUSG00000008683.10|ribosomal protein S15A
mm10_v2_chr2_+_104069819_104069891	1.9032	Pitx2_Otx2	ENSMUST00000111131.2|Cd59b|ENSMUSG00000068686.6|CD59b antigen 	ENSMUST00000111132.1|Cd59b|ENSMUSG00000068686.6|CD59b antigen 	ENSMUST00000129749.1|Cd59b|ENSMUSG00000068686.6|CD59b antigen
mm10_v2_chr11_-_69579320_69579352	1.89968	Pitx2_Otx2	ENSMUST00000048139.5|Wrap53|ENSMUSG00000041346.5|WD repeat containing, antisense to Trp53
mm10_v2_chr10_+_42502030_42502041	1.89922	Pitx2_Otx2	ENSMUST00000105500.1|Snx3|ENSMUSG00000019804.6|sorting nexin 3 	ENSMUST00000019939.5|Snx3|ENSMUSG00000019804.6|sorting nexin 3
mm10_v2_chr4_-_138913915_138913983	1.894	Pitx2_Otx2	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr16_-_46010212_46010223	1.88366	Pitx2_Otx2	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr14_-_51988829_51988837	1.87319	Pitx2_Otx2	ENSMUST00000181008.1|Gm16617|ENSMUSG00000097633.1|predicted gene, 16617
mm10_v2_chr7_-_34230281_34230308	1.86956	Pitx2_Otx2	ENSMUST00000038027.4|Gpi1|ENSMUSG00000036427.4|glucose phosphate isomerase 1
mm10_v2_chrX_+_9885622_9885622	1.86895	Pitx2_Otx2	ENSMUST00000067529.2|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5 	ENSMUST00000086165.3|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5
mm10_v2_chr5_-_23844085_23844161	1.86863	Pitx2_Otx2	ENSMUST00000030851.6|Tomm7|ENSMUSG00000028998.6|translocase of outer mitochondrial membrane 7 homolog (yeast)
mm10_v2_chr19_+_23675839_23675863	1.86704	Pitx2_Otx2	ENSMUST00000056396.5|Gm6563|ENSMUSG00000051255.5|predicted pseudogene 6563
mm10_v2_chr7_-_23947237_23947237	1.86372	Pitx2_Otx2	ENSMUST00000086013.2|Gm10175|ENSMUSG00000066724.2|predicted gene 10175
mm10_v2_chr10_-_53630439_53630439	1.86347	Pitx2_Otx2	ENSMUST00000075540.5|Mcm9|ENSMUSG00000058298.7|minichromosome maintenance complex component 9
mm10_v2_chr1_+_9545397_9545479	1.86302	Pitx2_Otx2	ENSMUST00000072079.7|Rrs1|ENSMUSG00000061024.7|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm10_v2_chr2_+_150909565_150909642	1.86146	Pitx2_Otx2	ENSMUST00000028948.4|Gins1|ENSMUSG00000027454.4|GINS complex subunit 1 (Psf1 homolog)
mm10_v2_chr2_+_32757234_32757319	1.85781	Pitx2_Otx2	ENSMUST00000009707.7|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000177382.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000140999.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A
mm10_v2_chr14_+_26122609_26122609	1.85569	Pitx2_Otx2	ENSMUST00000100810.6|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr10_+_128908907_128908925	1.8554	Pitx2_Otx2	ENSMUST00000105229.1|Cd63|ENSMUSG00000025351.7|CD63 antigen
mm10_v2_chr8_+_88174560_88174560	1.84703	Pitx2_Otx2	ENSMUST00000074808.2|9430002A10Rik|ENSMUSG00000062704.2|RIKEN cDNA 9430002A10 gene
mm10_v2_chr16_-_33056174_33056218	1.84098	Pitx2_Otx2	ENSMUST00000115100.1|Iqcg|ENSMUSG00000035578.9|IQ motif containing G 	ENSMUST00000040309.8|Iqcg|ENSMUSG00000035578.9|IQ motif containing G
mm10_v2_chr19_+_10206033_10206033	1.83612	Pitx2_Otx2	ENSMUST00000166412.1|Tmem258|ENSMUSG00000036372.8|transmembrane protein 258
mm10_v2_chr19_+_12846773_12846781	1.83595	Pitx2_Otx2	ENSMUST00000164001.1|Gm5244|ENSMUSG00000091014.1|predicted pseudogene 5244
mm10_v2_chr9_+_66060169_66060273	1.82582	Pitx2_Otx2	ENSMUST00000034947.5|Ppib|ENSMUSG00000032383.6|peptidylprolyl isomerase B
mm10_v2_chr10_+_94514825_94514922	1.82361	Pitx2_Otx2	ENSMUST00000065060.5|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr11_-_33843405_33843461	1.80494	Pitx2_Otx2	ENSMUST00000101368.2|Kcnip1|ENSMUSG00000053519.9|Kv channel-interacting protein 1
mm10_v2_chr2_+_91054054_91054114	1.79995	Pitx2_Otx2	ENSMUST00000002171.7|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3 	ENSMUST00000111441.3|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm10_v2_chr15_-_83464570_83464591	1.79834	Pitx2_Otx2	ENSMUST00000056177.6|Pacsin2|ENSMUSG00000016664.8|protein kinase C and casein kinase substrate in neurons 2
mm10_v2_chr9_+_107580117_107580117	1.79337	Pitx2_Otx2	ENSMUST00000093785.4|Nat6|ENSMUSG00000079334.2|N-acetyltransferase 6
mm10_v2_chr4_+_156013835_156013849	1.78735	Pitx2_Otx2	ENSMUST00000030952.5|Tnfrsf4|ENSMUSG00000029075.6|tumor necrosis factor receptor superfamily, member 4
mm10_v2_chr7_-_45154519_45154584	1.78373	Pitx2_Otx2	ENSMUST00000007977.7|Aldh16a1|ENSMUSG00000007833.7|aldehyde dehydrogenase 16 family, member A1 	ENSMUST00000107815.1|Aldh16a1|ENSMUSG00000007833.7|aldehyde dehydrogenase 16 family, member A1
mm10_v2_chr10_-_127522428_127522454	1.78362	Pitx2_Otx2	ENSMUST00000026470.4|Shmt2|ENSMUSG00000025403.4|serine hydroxymethyltransferase 2 (mitochondrial)
mm10_v2_chrX_+_96456362_96456390	1.77981	Pitx2_Otx2	ENSMUST00000079322.5|Heph|ENSMUSG00000031209.8|hephaestin 	ENSMUST00000113838.1|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr11_-_100135928_100135954	1.77281	Pitx2_Otx2	ENSMUST00000107411.2|Krt15|ENSMUSG00000054146.8|keratin 15
mm10_v2_chr7_-_19573343_19573377	1.77104	Pitx2_Otx2	ENSMUST00000051364.3|Gemin7|ENSMUSG00000044709.5|gem (nuclear organelle) associated protein 7
mm10_v2_chr1_+_58802492_58802517	1.77024	Pitx2_Otx2	ENSMUST00000165549.1|Casp8|ENSMUSG00000026029.8|caspase 8
mm10_v2_chr8_-_84966008_84966091	1.75922	Pitx2_Otx2	ENSMUST00000109738.3|Rnaseh2a|ENSMUSG00000052926.9|ribonuclease H2, large subunit 	ENSMUST00000065049.8|Rnaseh2a|ENSMUSG00000052926.9|ribonuclease H2, large subunit 	ENSMUST00000128972.1|Rnaseh2a|ENSMUSG00000052926.9|ribonuclease H2, large subunit
mm10_v2_chr17_-_56609689_56609771	1.75714	Pitx2_Otx2	ENSMUST00000052832.5|2410015M20Rik|ENSMUSG00000049760.5|RIKEN cDNA 2410015M20 gene
mm10_v2_chr14_-_26207041_26207041	1.7469	Pitx2_Otx2	ENSMUST00000022418.8|Tmem254b|ENSMUSG00000021867.10|transmembrane protein 254b
mm10_v2_chr4_-_116627921_116627956	1.74564	Pitx2_Otx2	ENSMUST00000030456.7|Nasp|ENSMUSG00000028693.9|nuclear autoantigenic sperm protein (histone-binding)
mm10_v2_chr7_-_4524229_4524355	1.73137	Pitx2_Otx2	ENSMUST00000154913.1|Tnni3|ENSMUSG00000035458.8|troponin I, cardiac 3
mm10_v2_chr10_-_12861735_12861735	1.7279	Pitx2_Otx2	ENSMUST00000076817.4|Utrn|ENSMUSG00000019820.9|utrophin
mm10_v2_chr13_-_51203065_51203065	1.72729	Pitx2_Otx2	ENSMUST00000091708.4|Hist1h2al|ENSMUSG00000091383.1|histone cluster 1, H2al
mm10_v2_chr11_+_96034885_96034965	1.72347	Pitx2_Otx2	ENSMUST00000006217.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) 	ENSMUST00000107700.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
mm10_v2_chr5_-_72587544_72587555	1.71582	Pitx2_Otx2	ENSMUST00000031124.4|Gm5868|ENSMUSG00000060204.4|predicted gene 5868
mm10_v2_chr15_+_102460076_102460108	1.71236	Pitx2_Otx2	ENSMUST00000164688.1|Prr13|ENSMUSG00000023048.7|proline rich 13
mm10_v2_chrX_-_140956675_140956728	1.71169	Pitx2_Otx2	ENSMUST00000033805.8|Psmd10|ENSMUSG00000031429.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENSMUST00000112978.1|Psmd10|ENSMUSG00000031429.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
mm10_v2_chr8_+_84872105_84872112	1.71152	Pitx2_Otx2	ENSMUST00000136026.1|Syce2|ENSMUSG00000003824.6|synaptonemal complex central element protein 2 	ENSMUST00000170296.1|Syce2|ENSMUSG00000003824.6|synaptonemal complex central element protein 2
mm10_v2_chr14_+_20703027_20703077	1.7067	Pitx2_Otx2	ENSMUST00000071215.3|Chchd1|ENSMUSG00000063787.3|coiled-coil-helix-coiled-coil-helix domain containing 1
mm10_v2_chr11_+_76945719_76945821	1.70588	Pitx2_Otx2	ENSMUST00000125145.1|Blmh|ENSMUSG00000020840.4|bleomycin hydrolase
mm10_v2_chr7_-_141475131_141475168	1.70298	Pitx2_Otx2	ENSMUST00000043870.8|Polr2l|ENSMUSG00000038489.8|polymerase (RNA) II (DNA directed) polypeptide L
mm10_v2_chr4_-_139352538_139352586	1.69667	Pitx2_Otx2	ENSMUST00000102503.3|Mrto4|ENSMUSG00000028741.7|MRT4, mRNA turnover 4, homolog (S. cerevisiae)
mm10_v2_chr7_-_19573379_19573403	1.69629	Pitx2_Otx2	ENSMUST00000119912.1|Gemin7|ENSMUSG00000044709.5|gem (nuclear organelle) associated protein 7
mm10_v2_chr11_+_100622870_100622881	1.69287	Pitx2_Otx2	ENSMUST00000017981.3|Nkiras2|ENSMUSG00000017837.6|NFKB inhibitor interacting Ras-like protein 2
mm10_v2_chr5_+_100798627_100798770	1.68627	Pitx2_Otx2	ENSMUST00000016977.8|Mrps18c|ENSMUSG00000016833.8|mitochondrial ribosomal protein S18C 	ENSMUST00000112898.1|Mrps18c|ENSMUSG00000016833.8|mitochondrial ribosomal protein S18C 	ENSMUST00000112901.1|Mrps18c|ENSMUSG00000016833.8|mitochondrial ribosomal protein S18C
mm10_v2_chr14_+_25983005_25983005	1.68515	Pitx2_Otx2	ENSMUST00000049793.8|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr3_+_133338936_133339109	1.68501	Pitx2_Otx2	ENSMUST00000150386.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2 	ENSMUST00000125858.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2
mm10_v2_chr4_-_150909812_150909926	1.67978	Pitx2_Otx2	ENSMUST00000134751.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7 	ENSMUST00000030805.7|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7
mm10_v2_chr11_-_100527896_100528000	1.67008	Pitx2_Otx2	ENSMUST00000107389.1|Acly|ENSMUSG00000020917.11|ATP citrate lyase 	ENSMUST00000007131.9|Acly|ENSMUSG00000020917.11|ATP citrate lyase
mm10_v2_chr16_+_55966275_55966334	1.66306	Pitx2_Otx2	ENSMUST00000023269.4|RPL24|ENSMUSG00000098274.1|60S ribosomal protein L24
mm10_v2_chr11_+_80383279_80383304	1.66031	Pitx2_Otx2	ENSMUST00000165565.1|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207 	ENSMUST00000017567.7|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr8_-_70510322_70510422	1.65833	Pitx2_Otx2	ENSMUST00000140679.1|Uba52|ENSMUSG00000090137.2|ubiquitin A-52 residue ribosomal protein fusion product 1 	ENSMUST00000129909.1|Uba52|ENSMUSG00000090137.2|ubiquitin A-52 residue ribosomal protein fusion product 1 	ENSMUST00000081940.4|Uba52|ENSMUSG00000090137.2|ubiquitin A-52 residue ribosomal protein fusion product 1
mm10_v2_chr5_-_65428354_65428374	1.6523	Pitx2_Otx2	ENSMUST00000131263.1|Ugdh|ENSMUSG00000029201.8|UDP-glucose dehydrogenase
mm10_v2_chr7_+_45718058_45718111	1.6504	Pitx2_Otx2	ENSMUST00000072503.6|Rpl18|ENSMUSG00000059070.8|ribosomal protein L18
mm10_v2_chr2_-_30093642_30093679	1.64998	Pitx2_Otx2	ENSMUST00000102865.4|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr15_-_71954395_71954424	1.64549	Pitx2_Otx2	ENSMUST00000159410.1|Col22a1|ENSMUSG00000079022.3|collagen, type XXII, alpha 1
mm10_v2_chr7_+_141447645_141447850	1.64529	Pitx2_Otx2	ENSMUST00000106004.1|Rplp2|ENSMUSG00000025508.7|ribosomal protein, large P2 	ENSMUST00000106003.1|Rplp2|ENSMUSG00000025508.7|ribosomal protein, large P2
mm10_v2_chr7_-_15946070_15946108	1.63975	Pitx2_Otx2	ENSMUST00000044158.8|Gltscr2|ENSMUSG00000041560.8|glioma tumor suppressor candidate region gene 2
mm10_v2_chr19_+_5689131_5689131	1.63445	Pitx2_Otx2	ENSMUST00000004156.8|Map3k11|ENSMUSG00000004054.8|mitogen-activated protein kinase kinase kinase 11
mm10_v2_chr15_-_83464595_83464614	1.62808	Pitx2_Otx2	ENSMUST00000171436.1|Pacsin2|ENSMUSG00000016664.8|protein kinase C and casein kinase substrate in neurons 2
mm10_v2_chr8_+_70673364_70673432	1.62721	Pitx2_Otx2	ENSMUST00000146972.1|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr9_+_64960814_64960843	1.62688	Pitx2_Otx2	ENSMUST00000170517.1|Vwa9|ENSMUSG00000034263.6|von Willebrand factor A domain containing 9
mm10_v2_chr6_-_131293187_131293248	1.62651	Pitx2_Otx2	ENSMUST00000032307.5|Magohb|ENSMUSG00000030188.6|mago-nashi homolog B (Drosophila)
mm10_v2_chr5_+_120513102_120513143	1.60815	Pitx2_Otx2	ENSMUST00000111889.1|Slc8b1|ENSMUSG00000032754.8|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
mm10_v2_chr17_+_56770258_56770305	1.60774	Pitx2_Otx2	ENSMUST00000168666.2|Prr22|ENSMUSG00000090273.2|proline rich 22
mm10_v2_chr9_+_54950808_54950820	1.60388	Pitx2_Otx2	ENSMUST00000172407.1|Psma4|ENSMUSG00000032301.7|proteasome (prosome, macropain) subunit, alpha type 4
mm10_v2_chr13_+_67863324_67863328	1.60365	Pitx2_Otx2	ENSMUST00000078471.5|BC048507|ENSMUSG00000064063.5|cDNA sequence BC048507
mm10_v2_chr11_+_119913423_119913441	1.60246	Pitx2_Otx2	ENSMUST00000132197.1|Chmp6|ENSMUSG00000025371.6|charged multivesicular body protein 6
mm10_v2_chr15_-_76660061_76660098	1.59586	Pitx2_Otx2	ENSMUST00000081291.6|Cyhr1|ENSMUSG00000053929.10|cysteine and histidine rich 1
mm10_v2_chr2_-_132247747_132247807	1.59521	Pitx2_Otx2	ENSMUST00000110163.1|Tmem230|ENSMUSG00000027341.4|transmembrane protein 230 	ENSMUST00000180286.1|Tmem230|ENSMUSG00000027341.4|transmembrane protein 230 	ENSMUST00000028816.2|Tmem230|ENSMUSG00000027341.4|transmembrane protein 230
mm10_v2_chr17_+_24669730_24669752	1.59039	Pitx2_Otx2	ENSMUST00000047179.5|Zfp598|ENSMUSG00000041130.9|zinc finger protein 598
mm10_v2_chr11_+_53324674_53324704	1.58681	Pitx2_Otx2	ENSMUST00000018383.3|Zcchc10|ENSMUSG00000018239.3|zinc finger, CCHC domain containing 10
mm10_v2_chr7_+_127904079_127904125	1.58328	Pitx2_Otx2	ENSMUST00000071056.7|Bckdk|ENSMUSG00000030802.8|branched chain ketoacid dehydrogenase kinase
mm10_v2_chr10_+_80151154_80151375	1.58172	Pitx2_Otx2	ENSMUST00000146516.1|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000144526.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr15_-_50889691_50889714	1.57615	Pitx2_Otx2	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr6_-_85933379_85933379	1.57548	Pitx2_Otx2	ENSMUST00000162660.1|Nat8b|ENSMUSG00000089634.1|N-acetyltransferase 8B
mm10_v2_chr13_-_21501418_21501418	1.57407	Pitx2_Otx2	ENSMUST00000044043.2|Gm11273|ENSMUSG00000079941.1|predicted gene 11273
mm10_v2_chr8_-_22398588_22398621	1.57159	Pitx2_Otx2	ENSMUST00000033871.6|Slc25a15|ENSMUSG00000031482.8|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15
mm10_v2_chr7_-_144582392_144582463	1.56797	Pitx2_Otx2	ENSMUST00000033394.7|Fadd|ENSMUSG00000031077.7|Fas (TNFRSF6)-associated via death domain
mm10_v2_chr19_+_40831248_40831292	1.56409	Pitx2_Otx2	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chrX_-_139714481_139714507	1.56055	Pitx2_Otx2	ENSMUST00000183728.1|Gm15013|ENSMUSG00000098559.1|predicted gene 15013
mm10_v2_chr8_+_123062942_123062988	1.5537	Pitx2_Otx2	ENSMUST00000142541.1|Spg7|ENSMUSG00000000738.11|spastic paraplegia 7 homolog (human) 	ENSMUST00000125975.1|Spg7|ENSMUSG00000000738.11|spastic paraplegia 7 homolog (human)
mm10_v2_chrX_+_134585644_134585698	1.54838	Pitx2_Otx2	ENSMUST00000113211.1|Rpl36a|ENSMUSG00000079435.3|ribosomal protein L36A
mm10_v2_chr16_-_38550173_38550258	1.54263	Pitx2_Otx2	ENSMUST00000036210.6|Poglut1|ENSMUSG00000034064.8|protein O-glucosyltransferase 1
mm10_v2_chr8_-_111300222_111300241	1.54134	Pitx2_Otx2	ENSMUST00000038739.4|Rfwd3|ENSMUSG00000033596.4|ring finger and WD repeat domain 3
mm10_v2_chr13_-_97747373_97747384	1.53419	Pitx2_Otx2	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr9_+_64960892_64960937	1.53409	Pitx2_Otx2	ENSMUST00000037504.5|Vwa9|ENSMUSG00000034263.6|von Willebrand factor A domain containing 9
mm10_v2_chr3_-_8923796_8923918	1.52716	Pitx2_Otx2	ENSMUST00000042148.5|Mrps28|ENSMUSG00000040269.5|mitochondrial ribosomal protein S28
mm10_v2_chr7_+_19489045_19489067	1.5174	Pitx2_Otx2	ENSMUST00000011407.7|Exoc3l2|ENSMUSG00000011263.9|exocyst complex component 3-like 2 	ENSMUST00000137613.1|Exoc3l2|ENSMUSG00000011263.9|exocyst complex component 3-like 2
mm10_v2_chr8_-_3467617_3467680	1.51697	Pitx2_Otx2	ENSMUST00000111081.3|Pex11g|ENSMUSG00000069633.6|peroxisomal biogenesis factor 11 gamma 	ENSMUST00000118194.1|Pex11g|ENSMUSG00000069633.6|peroxisomal biogenesis factor 11 gamma 	ENSMUST00000004686.6|Pex11g|ENSMUSG00000069633.6|peroxisomal biogenesis factor 11 gamma
mm10_v2_chr3_+_96629919_96629955	1.51267	Pitx2_Otx2	ENSMUST00000048915.6|Rbm8a|ENSMUSG00000038374.6|RNA binding motif protein 8a
mm10_v2_chr3_-_10351313_10351342	1.5084	Pitx2_Otx2	ENSMUST00000108377.1|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1 	ENSMUST00000037839.5|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1
mm10_v2_chr10_-_71238274_71238288	1.50612	Pitx2_Otx2	ENSMUST00000092430.4|Tfam|ENSMUSG00000003923.8|transcription factor A, mitochondrial 	ENSMUST00000105432.3|Tfam|ENSMUSG00000003923.8|transcription factor A, mitochondrial
mm10_v2_chr1_-_156032948_156032978	1.50316	Pitx2_Otx2	ENSMUST00000136397.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr9_+_57521232_57521314	1.50274	Pitx2_Otx2	ENSMUST00000000090.6|Cox5a|ENSMUSG00000000088.6|cytochrome c oxidase subunit Va
mm10_v2_chr17_-_46440099_46440125	1.50083	Pitx2_Otx2	ENSMUST00000166852.1|Gm5093|ENSMUSG00000091742.1|predicted gene 5093
mm10_v2_chr7_-_30612731_30612744	1.4917	Pitx2_Otx2	ENSMUST00000006476.4|Upk1a|ENSMUSG00000006313.4|uroplakin 1A
mm10_v2_chr19_-_8786408_8786422	1.49092	Pitx2_Otx2	ENSMUST00000176496.1|Taf6l|ENSMUSG00000003680.9|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
mm10_v2_chr7_-_66388286_66388350	1.4859	Pitx2_Otx2	ENSMUST00000015277.7|Lrrk1|ENSMUSG00000015133.10|leucine-rich repeat kinase 1
mm10_v2_chr10_-_75773350_75773434	1.48561	Pitx2_Otx2	ENSMUST00000001716.7|Ddt|ENSMUSG00000001666.8|D-dopachrome tautomerase
mm10_v2_chr3_+_90104128_90104143	1.48119	Pitx2_Otx2	ENSMUST00000029548.4|Nup210l|ENSMUSG00000027939.7|nucleoporin 210-like
mm10_v2_chrX_+_36874351_36874368	1.46589	Pitx2_Otx2	ENSMUST00000016452.7|Ube2a|ENSMUSG00000016308.9|ubiquitin-conjugating enzyme E2A
mm10_v2_chr1_+_15805639_15805675	1.46217	Pitx2_Otx2	ENSMUST00000027057.6|Terf1|ENSMUSG00000025925.8|telomeric repeat binding factor 1
mm10_v2_chr12_-_54862783_54862921	1.45699	Pitx2_Otx2	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr16_-_22265950_22266005	1.45483	Pitx2_Otx2	ENSMUST00000161286.1|Tra2b|ENSMUSG00000022858.9|transformer 2 beta homolog (Drosophila)
mm10_v2_chr4_+_32623985_32624084	1.45256	Pitx2_Otx2	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr19_+_40831296_40831313	1.44481	Pitx2_Otx2	ENSMUST00000119316.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr10_-_40302186_40302206	1.44147	Pitx2_Otx2	ENSMUST00000099945.4|Amd1|ENSMUSG00000075232.4|S-adenosylmethionine decarboxylase 1
mm10_v2_chr19_-_37330613_37330613	1.44033	Pitx2_Otx2	ENSMUST00000131070.1|Ide|ENSMUSG00000056999.8|insulin degrading enzyme
mm10_v2_chr11_-_78751656_78751729	1.44033	Pitx2_Otx2	ENSMUST00000059468.4|Fam58b|ENSMUSG00000049489.4|family with sequence similarity 58, member B
mm10_v2_chr5_-_99978914_99978966	1.43799	Pitx2_Otx2	ENSMUST00000112939.3|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000171786.1|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000072750.6|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000019128.8|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000172361.1|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D
mm10_v2_chr7_-_133782721_133782762	1.43584	Pitx2_Otx2	ENSMUST00000063669.1|Dhx32|ENSMUSG00000030986.6|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm10_v2_chr17_-_74323896_74323954	1.4354	Pitx2_Otx2	ENSMUST00000164832.1|Dpy30|ENSMUSG00000024067.7|dpy-30 homolog (C. elegans)
mm10_v2_chr17_-_33824346_33824562	1.43466	Pitx2_Otx2	ENSMUST00000173879.1|Rps28|ENSMUSG00000067288.6|ribosomal protein S28 	ENSMUST00000166693.2|Rps28|ENSMUSG00000067288.6|ribosomal protein S28 	ENSMUST00000173019.1|Rps28|ENSMUSG00000067288.6|ribosomal protein S28 	ENSMUST00000087342.6|Rps28|ENSMUSG00000067288.6|ribosomal protein S28 	ENSMUST00000173844.1|Rps28|ENSMUSG00000067288.6|ribosomal protein S28
mm10_v2_chr1_-_13589717_13589904	1.42371	Pitx2_Otx2	ENSMUST00000027068.4|Tram1|ENSMUSG00000025935.4|translocating chain-associating membrane protein 1
mm10_v2_chr12_-_85280306_85280347	1.41601	Pitx2_Otx2	ENSMUST00000117138.2|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr9_+_37208291_37208360	1.41523	Pitx2_Otx2	ENSMUST00000034632.8|Tmem218|ENSMUSG00000032121.8|transmembrane protein 218
mm10_v2_chr11_+_117308135_117308158	1.40508	Pitx2_Otx2	ENSMUST00000153668.1|Sept9|ENSMUSG00000059248.7|septin 9
mm10_v2_chr11_+_51967649_51967709	1.39808	Pitx2_Otx2	ENSMUST00000102763.4|Cdkn2aipnl|ENSMUSG00000020392.8|CDKN2A interacting protein N-terminal like
mm10_v2_chr17_-_6655939_6655939	1.39702	Pitx2_Otx2	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr15_-_36598019_36598124	1.39485	Pitx2_Otx2	ENSMUST00000155116.1|Pabpc1|ENSMUSG00000022283.8|poly(A) binding protein, cytoplasmic 1
mm10_v2_chr5_+_15516489_15516489	1.39073	Pitx2_Otx2	ENSMUST00000178227.1|Gm21847|ENSMUSG00000094230.1|predicted gene, 21847
mm10_v2_chr7_-_34196608_34196675	1.38581	Pitx2_Otx2	ENSMUST00000148381.1|Pdcd2l|ENSMUSG00000002635.5|programmed cell death 2-like 	ENSMUST00000002710.3|Pdcd2l|ENSMUSG00000002635.5|programmed cell death 2-like
mm10_v2_chr7_+_75701965_75702014	1.38549	Pitx2_Otx2	ENSMUST00000094307.3|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr1_-_181183739_181183739	1.37618	Pitx2_Otx2	ENSMUST00000159290.1|Wdr26|ENSMUSG00000038733.7|WD repeat domain 26
mm10_v2_chr17_+_6430112_6430204	1.37462	Pitx2_Otx2	ENSMUST00000179569.1|Dynlt1b|ENSMUSG00000096255.1|dynein light chain Tctex-type 1B
mm10_v2_chr2_-_163472561_163472635	1.37439	Pitx2_Otx2	ENSMUST00000109418.1|Fitm2|ENSMUSG00000048486.6|fat storage-inducing transmembrane protein 2
mm10_v2_chr4_+_126677630_126677646	1.37299	Pitx2_Otx2	ENSMUST00000030642.2|Psmb2|ENSMUSG00000028837.2|proteasome (prosome, macropain) subunit, beta type 2
mm10_v2_chr12_-_65073927_65073954	1.3694	Pitx2_Otx2	ENSMUST00000021332.8|Fkbp3|ENSMUSG00000020949.8|FK506 binding protein 3
mm10_v2_chr7_-_101845300_101845339	1.36547	Pitx2_Otx2	ENSMUST00000094141.5|Folr2|ENSMUSG00000032725.9|folate receptor 2 (fetal)
mm10_v2_chr1_+_120006980_120007028	1.36404	Pitx2_Otx2	ENSMUST00000072886.4|Sctr|ENSMUSG00000026387.9|secretin receptor
mm10_v2_chr7_-_81345189_81345254	1.35936	Pitx2_Otx2	ENSMUST00000080813.4|Rps17|ENSMUSG00000061787.8|ribosomal protein S17
mm10_v2_chr2_+_79707780_79707927	1.35824	Pitx2_Otx2	ENSMUST00000090760.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000040863.4|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000111780.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm10_v2_chr7_-_116084635_116084635	1.35706	Pitx2_Otx2	ENSMUST00000111755.3|Gm4353|ENSMUSG00000091900.2|predicted gene 4353
mm10_v2_chr5_-_135394499_135394558	1.3485	Pitx2_Otx2	ENSMUST00000065638.4|Pom121|ENSMUSG00000053293.5|nuclear pore membrane protein 121 	ENSMUST00000111171.2|Pom121|ENSMUSG00000053293.5|nuclear pore membrane protein 121
mm10_v2_chr4_-_142239356_142239418	1.34833	Pitx2_Otx2	ENSMUST00000036476.3|Kazn|ENSMUSG00000040606.7|kazrin, periplakin interacting protein
mm10_v2_chr6_+_47920476_47920636	1.3471	Pitx2_Otx2	ENSMUST00000009411.8|Zfp212|ENSMUSG00000052763.7|Zinc finger protein 212
mm10_v2_chr6_-_71823805_71823814	1.34567	Pitx2_Otx2	ENSMUST00000065103.2|Mrpl35|ENSMUSG00000052962.2|mitochondrial ribosomal protein L35
mm10_v2_chr10_-_80900749_80900969	1.34538	Pitx2_Otx2	ENSMUST00000020440.6|Timm13|ENSMUSG00000020219.6|translocase of inner mitochondrial membrane 13
mm10_v2_chr13_-_118387224_118387275	1.3346	Pitx2_Otx2	ENSMUST00000022245.8|Mrps30|ENSMUSG00000021731.9|mitochondrial ribosomal protein S30
mm10_v2_chr18_-_9726670_9726670	1.33407	Pitx2_Otx2	ENSMUST00000171339.1|Gm17430|ENSMUSG00000091285.1|predicted gene, 17430
mm10_v2_chr8_-_70897407_70897443	1.32966	Pitx2_Otx2	ENSMUST00000054220.8|Rpl18a|ENSMUSG00000045128.8|ribosomal protein L18A
mm10_v2_chr5_+_3343893_3343945	1.32831	Pitx2_Otx2	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr11_+_88204396_88204444	1.31547	Pitx2_Otx2	ENSMUST00000118784.1|Mrps23|ENSMUSG00000023723.11|mitochondrial ribosomal protein S23 	ENSMUST00000139170.1|Mrps23|ENSMUSG00000023723.11|mitochondrial ribosomal protein S23 	ENSMUST00000107915.3|Mrps23|ENSMUSG00000023723.11|mitochondrial ribosomal protein S23 	ENSMUST00000144070.1|Mrps23|ENSMUSG00000023723.11|mitochondrial ribosomal protein S23
mm10_v2_chr5_-_24581879_24581879	1.31119	Pitx2_Otx2	ENSMUST00000088299.4|Gm10221|ENSMUSG00000067719.4|predicted gene 10221
mm10_v2_chr10_+_81321103_81321247	1.30892	Pitx2_Otx2	ENSMUST00000050867.6|Cactin|ENSMUSG00000034889.7|cactin, spliceosome C complex subunit
mm10_v2_chr19_+_8892987_8893052	1.30781	Pitx2_Otx2	ENSMUST00000096249.5|Ints5|ENSMUSG00000071652.5|integrator complex subunit 5
mm10_v2_chr7_-_29180699_29180710	1.30431	Pitx2_Otx2	ENSMUST00000059642.10|Psmd8|ENSMUSG00000030591.10|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm10_v2_chr7_+_4915202_4915230	1.29962	Pitx2_Otx2	ENSMUST00000116354.2|Zfp628|ENSMUSG00000074406.4|zinc finger protein 628
mm10_v2_chr9_+_107576915_107576990	1.29898	Pitx2_Otx2	ENSMUST00000112387.2|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1 	ENSMUST00000123005.1|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1 	ENSMUST00000010195.7|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1 	ENSMUST00000144392.1|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1
mm10_v2_chr4_-_150909428_150909651	1.2956	Pitx2_Otx2	ENSMUST00000128075.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7 	ENSMUST00000105674.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7 	ENSMUST00000105673.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7
mm10_v2_chr16_+_17489639_17489683	1.29332	Pitx2_Otx2	ENSMUST00000023448.6|Aifm3|ENSMUSG00000022763.10|apoptosis-inducing factor, mitochondrion-associated 3
mm10_v2_chr5_+_3344194_3344312	1.28811	Pitx2_Otx2	ENSMUST00000042410.4|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr7_-_84679346_84679401	1.28086	Pitx2_Otx2	ENSMUST00000069537.2|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6 	ENSMUST00000178385.1|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6
mm10_v2_chr4_+_117019400_117019437	1.27938	Pitx2_Otx2	ENSMUST00000106448.2|Eif2b3|ENSMUSG00000028683.8|eukaryotic translation initiation factor 2B, subunit 3 	ENSMUST00000106447.2|Eif2b3|ENSMUSG00000028683.8|eukaryotic translation initiation factor 2B, subunit 3
mm10_v2_chr1_+_171331414_171331426	1.27761	Pitx2_Otx2	ENSMUST00000097467.1|Dedd|ENSMUSG00000013973.6|death effector domain-containing
mm10_v2_chr6_-_86684510_86684529	1.27506	Pitx2_Otx2	ENSMUST00000001186.4|Snrnp27|ENSMUSG00000001158.7|small nuclear ribonucleoprotein 27 (U4/U6.U5) 	ENSMUST00000113683.1|Snrnp27|ENSMUSG00000001158.7|small nuclear ribonucleoprotein 27 (U4/U6.U5)
mm10_v2_chr2_-_30093607_30093641	1.2717	Pitx2_Otx2	ENSMUST00000081838.6|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr7_-_25297967_25298005	1.27126	Pitx2_Otx2	ENSMUST00000005583.5|Pafah1b3|ENSMUSG00000005447.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
mm10_v2_chr3_+_95318782_95318793	1.2697	Pitx2_Otx2	ENSMUST00000139866.1|Cers2|ENSMUSG00000015714.5|ceramide synthase 2
mm10_v2_chr1_+_143739016_143739050	1.26596	Pitx2_Otx2	ENSMUST00000145969.1|Glrx2|ENSMUSG00000018196.12|glutaredoxin 2 (thioltransferase)
mm10_v2_chr12_+_111678094_111678140	1.26365	Pitx2_Otx2	ENSMUST00000084947.3|Trmt61a|ENSMUSG00000060950.5|tRNA methyltransferase 61A 	ENSMUST00000168338.1|Trmt61a|ENSMUSG00000060950.5|tRNA methyltransferase 61A
mm10_v2_chr1_+_17727034_17727088	1.25969	Pitx2_Otx2	ENSMUST00000159958.1|Crispld1|ENSMUSG00000025776.7|cysteine-rich secretory protein LCCL domain containing 1 	ENSMUST00000160305.1|Crispld1|ENSMUSG00000025776.7|cysteine-rich secretory protein LCCL domain containing 1 	ENSMUST00000095075.4|Crispld1|ENSMUSG00000025776.7|cysteine-rich secretory protein LCCL domain containing 1
mm10_v2_chr2_-_84727236_84727299	1.25733	Pitx2_Otx2	ENSMUST00000165219.1|Clp1|ENSMUSG00000027079.9|CLP1, cleavage and polyadenylation factor I subunit
mm10_v2_chr9_+_108936648_108936715	1.24795	Pitx2_Otx2	ENSMUST00000026743.8|Uqcrc1|ENSMUSG00000025651.9|ubiquinol-cytochrome c reductase core protein 1
mm10_v2_chr14_-_20496780_20496901	1.2462	Pitx2_Otx2	ENSMUST00000022353.3|Mss51|ENSMUSG00000021815.3|MSS51 mitochondrial translational activator
mm10_v2_chr2_+_144368961_144369062	1.24062	Pitx2_Otx2	ENSMUST00000028911.8|Csrp2bp|ENSMUSG00000027425.12|cysteine and glycine-rich protein 2 binding protein 	ENSMUST00000147747.1|Csrp2bp|ENSMUSG00000027425.12|cysteine and glycine-rich protein 2 binding protein 	ENSMUST00000183618.1|Pet117|ENSMUSG00000098387.1|PET117 homolog (S. cerevisiae)
mm10_v2_chr11_+_54866374_54866392	1.2323	Pitx2_Otx2	ENSMUST00000020504.5|Hint1|ENSMUSG00000020267.6|histidine triad nucleotide binding protein 1
mm10_v2_chr15_+_81663889_81663958	1.22335	Pitx2_Otx2	ENSMUST00000023029.8|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila) 	ENSMUST00000174229.1|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila) 	ENSMUST00000172748.1|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila)
mm10_v2_chr11_-_54787597_54787711	1.20821	Pitx2_Otx2	ENSMUST00000153209.1|Cdc42se2|ENSMUSG00000052298.6|CDC42 small effector 2 	ENSMUST00000064104.6|Cdc42se2|ENSMUSG00000052298.6|CDC42 small effector 2
mm10_v2_chrM_+_7005_7022	1.20697	Pitx2_Otx2	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr5_+_115559505_115559578	1.20501	Pitx2_Otx2	ENSMUST00000156359.1|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0 	ENSMUST00000152976.1|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0
mm10_v2_chr10_+_81070035_81070121	1.20182	Pitx2_Otx2	ENSMUST00000005057.6|Thop1|ENSMUSG00000004929.6|thimet oligopeptidase 1
mm10_v2_chr19_+_43752996_43753137	1.20152	Pitx2_Otx2	ENSMUST00000026199.7|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli) 	ENSMUST00000112047.3|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli) 	ENSMUST00000153295.1|Cutc|ENSMUSG00000025193.8|cutC copper transporter homolog (E.coli)
mm10_v2_chr17_+_24896488_24896530	1.19542	Pitx2_Otx2	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr11_-_29515017_29515040	1.19512	Pitx2_Otx2	ENSMUST00000133103.1|Prorsd1|ENSMUSG00000032673.5|prolyl-tRNA synthetase domain containing 1 	ENSMUST00000039900.3|Prorsd1|ENSMUSG00000032673.5|prolyl-tRNA synthetase domain containing 1
mm10_v2_chr1_+_185332143_185332216	1.19032	Pitx2_Otx2	ENSMUST00000027916.6|Bpnt1|ENSMUSG00000026617.9|bisphosphate 3'-nucleotidase 1 	ENSMUST00000151769.1|Bpnt1|ENSMUSG00000026617.9|bisphosphate 3'-nucleotidase 1 	ENSMUST00000110965.1|Bpnt1|ENSMUSG00000026617.9|bisphosphate 3'-nucleotidase 1
mm10_v2_chr18_-_36726730_36726745	1.1898	Pitx2_Otx2	ENSMUST00000061829.6|Cd14|ENSMUSG00000051439.6|CD14 antigen
mm10_v2_chr11_+_60454587_60454657	1.1885	Pitx2_Otx2	ENSMUST00000018568.3|Drg2|ENSMUSG00000020537.3|developmentally regulated GTP binding protein 2
mm10_v2_chr7_+_101896817_101896961	1.18758	Pitx2_Otx2	ENSMUST00000143835.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr7_+_45639964_45640012	1.18556	Pitx2_Otx2	ENSMUST00000148532.1|Mamstr|ENSMUSG00000042918.9|MEF2 activating motif and SAP domain containing transcriptional regulator
mm10_v2_chr8_+_122376609_122376652	1.17421	Pitx2_Otx2	ENSMUST00000017622.5|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18 	ENSMUST00000093073.5|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18 	ENSMUST00000176699.1|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18
mm10_v2_chr11_+_75999912_75999946	1.1715	Pitx2_Otx2	ENSMUST00000066408.5|1700016K19Rik|ENSMUSG00000053783.5|RIKEN cDNA 1700016K19 gene
mm10_v2_chr5_-_113989739_113989744	1.17129	Pitx2_Otx2	ENSMUST00000077689.7|Ssh1|ENSMUSG00000042121.10|slingshot homolog 1 (Drosophila)
mm10_v2_chr11_-_35834492_35834509	1.16909	Pitx2_Otx2	ENSMUST00000018992.3|Rars|ENSMUSG00000018848.4|arginyl-tRNA synthetase
mm10_v2_chr1_-_155232710_155232729	1.16859	Pitx2_Otx2	ENSMUST00000035914.3|BC034090|ENSMUSG00000033722.3|cDNA sequence BC034090
mm10_v2_chr2_+_151542483_151542646	1.16786	Pitx2_Otx2	ENSMUST00000044011.5|Fkbp1a|ENSMUSG00000032966.8|FK506 binding protein 1a
mm10_v2_chr8_+_84856982_84857036	1.15887	Pitx2_Otx2	ENSMUST00000003906.6|Farsa|ENSMUSG00000003808.12|phenylalanyl-tRNA synthetase, alpha subunit 	ENSMUST00000109754.1|Farsa|ENSMUSG00000003808.12|phenylalanyl-tRNA synthetase, alpha subunit
mm10_v2_chr18_+_73863672_73863713	1.15757	Pitx2_Otx2	ENSMUST00000134847.1|Mro|ENSMUSG00000064036.9|maestro
mm10_v2_chr9_+_64179289_64179349	1.15714	Pitx2_Otx2	ENSMUST00000034965.6|Snapc5|ENSMUSG00000032398.6|small nuclear RNA activating complex, polypeptide 5
mm10_v2_chr3_+_90072641_90072657	1.15697	Pitx2_Otx2	ENSMUST00000121503.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000119570.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000062193.9|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma
mm10_v2_chr2_-_167661496_167661591	1.1511	Pitx2_Otx2	ENSMUST00000125544.2|Gm20431|ENSMUSG00000089739.2|predicted gene 20431 	ENSMUST00000006587.6|Tmem189|ENSMUSG00000090213.1|transmembrane protein 189
mm10_v2_chr4_+_133176336_133176371	1.15096	Pitx2_Otx2	ENSMUST00000105912.1|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2
mm10_v2_chr17_-_29264115_29264158	1.15057	Pitx2_Otx2	ENSMUST00000024802.8|Ppil1|ENSMUSG00000024007.8|peptidylprolyl isomerase (cyclophilin)-like 1
mm10_v2_chr7_+_131542867_131542867	1.15011	Pitx2_Otx2	ENSMUST00000046093.5|Hmx3|ENSMUSG00000040148.5|H6 homeobox 3
mm10_v2_chr18_-_24530203_24530245	1.14733	Pitx2_Otx2	ENSMUST00000046206.3|Rprd1a|ENSMUSG00000040446.3|regulation of nuclear pre-mRNA domain containing 1A
mm10_v2_chr11_+_46235460_46235531	1.14706	Pitx2_Otx2	ENSMUST00000060185.2|Fndc9|ENSMUSG00000048721.2|fibronectin type III domain containing 9
mm10_v2_chr7_-_127020321_127020336	1.14539	Pitx2_Otx2	ENSMUST00000032918.2|Pagr1a|ENSMUSG00000030680.3|PAXIP1 associated glutamate rich protein 1A
mm10_v2_chr19_-_5912834_5912871	1.14153	Pitx2_Otx2	ENSMUST00000136983.1|Dpf2|ENSMUSG00000024826.8|D4, zinc and double PHD fingers family 2
mm10_v2_chr15_-_50890041_50890064	1.14114	Pitx2_Otx2	ENSMUST00000077935.5|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr11_-_68927049_68927101	1.14062	Pitx2_Otx2	ENSMUST00000038932.7|Odf4|ENSMUSG00000032921.7|outer dense fiber of sperm tails 4
mm10_v2_chr11_-_53430417_53430434	1.13784	Pitx2_Otx2	ENSMUST00000109019.1|Uqcrq|ENSMUSG00000044894.8|ubiquinol-cytochrome c reductase, complex III subunit VII
mm10_v2_chr5_+_140735526_140735567	1.13389	Pitx2_Otx2	ENSMUST00000120630.2|Amz1|ENSMUSG00000050022.10|archaelysin family metallopeptidase 1
mm10_v2_chr8_-_111393810_111393834	1.13137	Pitx2_Otx2	ENSMUST00000038475.8|Fa2h|ENSMUSG00000033579.10|fatty acid 2-hydroxylase
mm10_v2_chr17_-_32388885_32389116	1.1312	Pitx2_Otx2	ENSMUST00000087703.5|Wiz|ENSMUSG00000024050.9|widely-interspaced zinc finger motifs 	ENSMUST00000170603.1|Wiz|ENSMUSG00000024050.9|widely-interspaced zinc finger motifs
mm10_v2_chr1_-_10038106_10038169	1.12975	Pitx2_Otx2	ENSMUST00000027050.3|Cops5|ENSMUSG00000025917.3|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)
mm10_v2_chr16_-_91931643_91931687	1.12841	Pitx2_Otx2	ENSMUST00000023677.3|Atp5o|ENSMUSG00000022956.4|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
mm10_v2_chr10_-_88826772_88826837	1.12506	Pitx2_Otx2	ENSMUST00000004470.7|Utp20|ENSMUSG00000004356.7|UTP20, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr7_-_45466894_45466901	1.1245	Pitx2_Otx2	ENSMUST00000033093.8|Bax|ENSMUSG00000003873.10|BCL2-associated X protein
mm10_v2_chr19_+_3282901_3283071	1.12169	Pitx2_Otx2	ENSMUST00000025745.3|Mrpl21|ENSMUSG00000024829.6|mitochondrial ribosomal protein L21 	ENSMUST00000025743.6|Mrpl21|ENSMUSG00000024829.6|mitochondrial ribosomal protein L21
mm10_v2_chr19_+_4154606_4154629	1.12155	Pitx2_Otx2	ENSMUST00000061086.8|Ptprcap|ENSMUSG00000045826.8|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
mm10_v2_chr13_+_8202885_8202918	1.1213	Pitx2_Otx2	ENSMUST00000139438.1|Adarb2|ENSMUSG00000052551.9|adenosine deaminase, RNA-specific, B2 	ENSMUST00000135574.1|Adarb2|ENSMUSG00000052551.9|adenosine deaminase, RNA-specific, B2
mm10_v2_chr5_+_64230285_64230312	1.12056	Pitx2_Otx2	ENSMUST00000119756.1|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr6_-_71144338_71144356	1.11812	Pitx2_Otx2	ENSMUST00000074241.7|Thnsl2|ENSMUSG00000054474.9|threonine synthase-like 2 (bacterial) 	ENSMUST00000160918.1|Thnsl2|ENSMUSG00000054474.9|threonine synthase-like 2 (bacterial)
mm10_v2_chr2_-_180954676_180954708	1.11649	Pitx2_Otx2	ENSMUST00000148905.1|Nkain4|ENSMUSG00000027574.9|Na+/K+ transporting ATPase interacting 4 	ENSMUST00000103053.3|Nkain4|ENSMUSG00000027574.9|Na+/K+ transporting ATPase interacting 4 	ENSMUST00000108873.2|Nkain4|ENSMUSG00000027574.9|Na+/K+ transporting ATPase interacting 4
mm10_v2_chr10_+_43901782_43901845	1.11134	Pitx2_Otx2	ENSMUST00000054418.5|Rtn4ip1|ENSMUSG00000019864.7|reticulon 4 interacting protein 1
mm10_v2_chr11_-_4095344_4095445	1.11066	Pitx2_Otx2	ENSMUST00000004868.5|Mtfp1|ENSMUSG00000004748.5|mitochondrial fission process 1
mm10_v2_chr13_-_54468805_54468862	1.10985	Pitx2_Otx2	ENSMUST00000026990.5|Thoc3|ENSMUSG00000025872.5|THO complex 3
mm10_v2_chr7_+_141131268_141131333	1.1019	Pitx2_Otx2	ENSMUST00000026568.8|Ptdss2|ENSMUSG00000025495.8|phosphatidylserine synthase 2
mm10_v2_chr10_-_93889758_93889826	1.10052	Pitx2_Otx2	ENSMUST00000181091.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2 	ENSMUST00000181217.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2 	ENSMUST00000047910.8|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2 	ENSMUST00000180688.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2
mm10_v2_chr10_+_79996479_79996505	1.0993	Pitx2_Otx2	ENSMUST00000132517.1|Abca7|ENSMUSG00000035722.9|ATP-binding cassette, sub-family A (ABC1), member 7
mm10_v2_chr11_-_97782377_97782399	1.09779	Pitx2_Otx2	ENSMUST00000128801.1|Rpl23|ENSMUSG00000071415.6|ribosomal protein L23
mm10_v2_chr6_+_136808248_136808261	1.09342	Pitx2_Otx2	ENSMUST00000074556.4|H2afj|ENSMUSG00000060032.4|H2A histone family, member J
mm10_v2_chr9_+_99575776_99575829	1.08919	Pitx2_Otx2	ENSMUST00000066650.5|Dbr1|ENSMUSG00000032469.6|debranching enzyme homolog 1 (S. cerevisiae) 	ENSMUST00000148987.1|Dbr1|ENSMUSG00000032469.6|debranching enzyme homolog 1 (S. cerevisiae)
mm10_v2_chr2_+_167932327_167932379	1.08486	Pitx2_Otx2	ENSMUST00000029053.7|Ptpn1|ENSMUSG00000027540.7|protein tyrosine phosphatase, non-receptor type 1
mm10_v2_chr17_+_34263209_34263256	1.08371	Pitx2_Otx2	ENSMUST00000040828.5|H2-Ab1|ENSMUSG00000073421.5|histocompatibility 2, class II antigen A, beta 1
mm10_v2_chr11_-_55461179_55461239	1.08224	Pitx2_Otx2	ENSMUST00000108857.1|Atox1|ENSMUSG00000018585.9|ATX1 (antioxidant protein 1) homolog 1 (yeast)
mm10_v2_chr7_-_45526146_45526268	1.08055	Pitx2_Otx2	ENSMUST00000167273.1|Ppp1r15a|ENSMUSG00000040435.10|protein phosphatase 1, regulatory (inhibitor) subunit 15A 	ENSMUST00000042105.8|Ppp1r15a|ENSMUSG00000040435.10|protein phosphatase 1, regulatory (inhibitor) subunit 15A
mm10_v2_chr14_+_66635251_66635349	1.07729	Pitx2_Otx2	ENSMUST00000159365.1|Adra1a|ENSMUSG00000045875.6|adrenergic receptor, alpha 1a 	ENSMUST00000054661.1|Adra1a|ENSMUSG00000045875.6|adrenergic receptor, alpha 1a 	ENSMUST00000159068.1|Adra1a|ENSMUSG00000045875.6|adrenergic receptor, alpha 1a
mm10_v2_chr8_-_95434869_95434901	1.0763	Pitx2_Otx2	ENSMUST00000034249.6|Gtl3|ENSMUSG00000031796.6|gene trap locus 3
mm10_v2_chr5_-_17888884_17888959	1.07463	Pitx2_Otx2	ENSMUST00000169095.1|Cd36|ENSMUSG00000002944.9|CD36 antigen
mm10_v2_chr11_-_97782409_97782437	1.06351	Pitx2_Otx2	ENSMUST00000103146.4|Rpl23|ENSMUSG00000071415.6|ribosomal protein L23
mm10_v2_chr5_-_142905816_142905832	1.06334	Pitx2_Otx2	ENSMUST00000171419.1|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr11_+_97685903_97685966	1.06097	Pitx2_Otx2	ENSMUST00000107583.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr2_-_26294550_26294561	1.06024	Pitx2_Otx2	ENSMUST00000057224.3|4932418E24Rik|ENSMUSG00000048038.6|RIKEN cDNA 4932418E24 gene
mm10_v2_chr5_+_121204477_121204499	1.05911	Pitx2_Otx2	ENSMUST00000031617.9|Rpl6|ENSMUSG00000029614.9|ribosomal protein L6
mm10_v2_chr15_-_93336800_93336852	1.05846	Pitx2_Otx2	ENSMUST00000080299.6|Yaf2|ENSMUSG00000022634.9|YY1 associated factor 2
mm10_v2_chr2_-_145935014_145935014	1.05801	Pitx2_Otx2	ENSMUST00000001818.4|Crnkl1|ENSMUSG00000001767.5|Crn, crooked neck-like 1 (Drosophila)
mm10_v2_chr9_-_50555170_50555183	1.05591	Pitx2_Otx2	ENSMUST00000119103.1|Bco2|ENSMUSG00000032066.9|beta-carotene oxygenase 2
mm10_v2_chr5_-_136198908_136198970	1.05378	Pitx2_Otx2	ENSMUST00000149151.1|Prkrip1|ENSMUSG00000039737.5|Prkr interacting protein 1 (IL11 inducible) 	ENSMUST00000151786.1|Prkrip1|ENSMUSG00000039737.5|Prkr interacting protein 1 (IL11 inducible)
mm10_v2_chr4_-_155645408_155645408	1.05117	Pitx2_Otx2	ENSMUST00000115821.2|Gm10563|ENSMUSG00000073682.3|predicted gene 10563
mm10_v2_chr18_+_56432116_56432163	1.04819	Pitx2_Otx2	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr8_-_70506710_70506766	1.04616	Pitx2_Otx2	ENSMUST00000136913.1|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene 	ENSMUST00000075175.5|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene
mm10_v2_chr4_-_139352298_139352313	1.0446	Pitx2_Otx2	ENSMUST00000030513.6|Mrto4|ENSMUSG00000028741.7|MRT4, mRNA turnover 4, homolog (S. cerevisiae) 	ENSMUST00000155257.1|Mrto4|ENSMUSG00000028741.7|MRT4, mRNA turnover 4, homolog (S. cerevisiae)
mm10_v2_chr10_-_43540945_43541024	1.04339	Pitx2_Otx2	ENSMUST00000147196.1|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene 	ENSMUST00000019932.3|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene
mm10_v2_chrX_-_7967817_7967910	1.04261	Pitx2_Otx2	ENSMUST00000033502.7|Gata1|ENSMUSG00000031162.8|GATA binding protein 1
mm10_v2_chr9_-_58249660_58249672	1.04227	Pitx2_Otx2	ENSMUST00000124063.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000126690.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia
mm10_v2_chr6_-_142507805_142507962	1.03613	Pitx2_Otx2	ENSMUST00000134191.1|Ldhb|ENSMUSG00000030246.5|lactate dehydrogenase B 	ENSMUST00000032373.5|Ldhb|ENSMUSG00000030246.5|lactate dehydrogenase B
mm10_v2_chr16_-_64771146_64771184	1.02713	Pitx2_Otx2	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr7_+_3617357_3617389	1.02705	Pitx2_Otx2	ENSMUST00000076657.4|Ndufa3|ENSMUSG00000035674.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 	ENSMUST00000108644.1|Ndufa3|ENSMUSG00000035674.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3
mm10_v2_chr17_-_23586214_23586269	1.0227	Pitx2_Otx2	ENSMUST00000115516.3|Zfp13|ENSMUSG00000062012.7|zinc finger protein 13
mm10_v2_chr11_-_3976778_3976778	1.02166	Pitx2_Otx2	ENSMUST00000042344.1|4930556J24Rik|ENSMUSG00000034493.1|RIKEN cDNA 4930556J24 gene
mm10_v2_chr10_+_59395632_59395632	1.02024	Pitx2_Otx2	ENSMUST00000092511.4|Gm10273|ENSMUSG00000069622.4|predicted pseudogene 10273
mm10_v2_chr13_-_99412816_99412864	1.01785	Pitx2_Otx2	ENSMUST00000180808.1|6430562O15Rik|ENSMUSG00000097828.1|RIKEN cDNA 6430562O15 gene
mm10_v2_chr10_+_31248140_31248140	1.01685	Pitx2_Otx2	ENSMUST00000050717.8|Gm5422|ENSMUSG00000039684.8|predicted pseudogene 5422
mm10_v2_chr5_-_136986829_136986901	1.01615	Pitx2_Otx2	ENSMUST00000034953.7|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1 	ENSMUST00000085941.5|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1
mm10_v2_chr17_-_28622479_28622521	1.01376	Pitx2_Otx2	ENSMUST00000130643.1|Srpk1|ENSMUSG00000004865.9|serine/arginine-rich protein specific kinase 1
mm10_v2_chr4_-_123718198_123718209	1.01204	Pitx2_Otx2	ENSMUST00000030401.7|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5
mm10_v2_chr5_-_51553896_51553921	1.01142	Pitx2_Otx2	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr7_-_114276107_114276125	0.999628	Pitx2_Otx2	ENSMUST00000033008.9|Psma1|ENSMUSG00000030751.11|proteasome (prosome, macropain) subunit, alpha type 1
mm10_v2_chr9_+_120571498_120571522	0.999579	Pitx2_Otx2	ENSMUST00000165532.1|Rpl14|ENSMUSG00000025794.8|ribosomal protein L14
mm10_v2_chr10_+_80053488_80053570	0.996746	Pitx2_Otx2	ENSMUST00000105372.1|Gpx4|ENSMUSG00000075706.4|glutathione peroxidase 4
mm10_v2_chr11_-_78080360_78080387	0.995468	Pitx2_Otx2	ENSMUST00000021183.3|Eral1|ENSMUSG00000020832.8|Era (G-protein)-like 1 (E. coli)
mm10_v2_chr5_+_135369942_135369997	0.99197	Pitx2_Otx2	ENSMUST00000000940.8|Nsun5|ENSMUSG00000000916.9|NOL1/NOP2/Sun domain family, member 5
mm10_v2_chr11_+_4218220_4218249	0.980438	Pitx2_Otx2	ENSMUST00000020699.3|Gatsl3|ENSMUSG00000020424.3|GATS protein-like 3
mm10_v2_chr5_-_138272733_138272754	0.980116	Pitx2_Otx2	ENSMUST00000161665.1|Gal3st4|ENSMUSG00000075593.4|galactose-3-O-sulfotransferase 4 	ENSMUST00000100530.1|Gal3st4|ENSMUSG00000075593.4|galactose-3-O-sulfotransferase 4
mm10_v2_chr11_+_78261717_78261803	0.974675	Pitx2_Otx2	ENSMUST00000010421.6|2610507B11Rik|ENSMUSG00000010277.7|RIKEN cDNA 2610507B11 gene
mm10_v2_chr3_+_135485605_135485668	0.972909	Pitx2_Otx2	ENSMUST00000029814.9|Manba|ENSMUSG00000028164.9|mannosidase, beta A, lysosomal
mm10_v2_chr2_-_73214323_73214333	0.970481	Pitx2_Otx2	ENSMUST00000100015.4|Ola1|ENSMUSG00000027108.9|Obg-like ATPase 1
mm10_v2_chr12_+_105032638_105032705	0.967846	Pitx2_Otx2	ENSMUST00000021522.3|Glrx5|ENSMUSG00000021102.3|glutaredoxin 5 homolog (S. cerevisiae)
mm10_v2_chr8_+_60890410_60890483	0.967698	Pitx2_Otx2	ENSMUST00000037190.8|2700029M09Rik|ENSMUSG00000038005.8|RIKEN cDNA 2700029M09 gene
mm10_v2_chr10_-_80657071_80657098	0.957497	Pitx2_Otx2	ENSMUST00000003434.7|Btbd2|ENSMUSG00000003344.8|BTB (POZ) domain containing 2
mm10_v2_chr14_-_79390666_79390778	0.95347	Pitx2_Otx2	ENSMUST00000022597.7|Naa16|ENSMUSG00000022020.8|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
mm10_v2_chr11_+_97685794_97685845	0.951239	Pitx2_Otx2	ENSMUST00000107584.1|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3 	ENSMUST00000107585.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr5_+_47984793_47984811	0.949236	Pitx2_Otx2	ENSMUST00000170109.2|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila) 	ENSMUST00000174421.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila) 	ENSMUST00000173702.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila) 	ENSMUST00000173107.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila)
mm10_v2_chr2_+_144594054_144594083	0.947274	Pitx2_Otx2	ENSMUST00000136628.1|Gm561|ENSMUSG00000074754.4|predicted gene 561
mm10_v2_chr17_+_28313513_28313644	0.946055	Pitx2_Otx2	ENSMUST00000114803.1|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E 	ENSMUST00000114801.1|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E 	ENSMUST00000114804.3|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E 	ENSMUST00000088007.4|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E
mm10_v2_chr11_+_69966896_69966918	0.938364	Pitx2_Otx2	ENSMUST00000151515.1|Cldn7|ENSMUSG00000018569.6|claudin 7
mm10_v2_chr3_-_34005490_34005514	0.938358	Pitx2_Otx2	ENSMUST00000060997.2|Gm9791|ENSMUSG00000044434.2|predicted pseudogene 9791
mm10_v2_chr4_-_156255327_156255344	0.930686	Pitx2_Otx2	ENSMUST00000179919.1|Samd11|ENSMUSG00000096351.1|sterile alpha motif domain containing 11
mm10_v2_chr3_+_108571699_108571699	0.925126	Pitx2_Otx2	ENSMUST00000143054.1|Taf13|ENSMUSG00000048100.7|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr19_+_6047081_6047104	0.924346	Pitx2_Otx2	ENSMUST00000025723.8|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr8_+_70718534_70718549	0.922922	Pitx2_Otx2	ENSMUST00000179347.1|Gm3336|ENSMUSG00000095026.1|predicted gene 3336
mm10_v2_chr18_-_9450097_9450161	0.916332	Pitx2_Otx2	ENSMUST00000053917.4|Ccny|ENSMUSG00000024286.7|cyclin Y
mm10_v2_chr11_+_82911253_82911294	0.916017	Pitx2_Otx2	ENSMUST00000164945.1|Unc45b|ENSMUSG00000018845.8|unc-45 homolog B (C. elegans) 	ENSMUST00000018989.7|Unc45b|ENSMUSG00000018845.8|unc-45 homolog B (C. elegans)
mm10_v2_chr4_+_100776664_100776692	0.914888	Pitx2_Otx2	ENSMUST00000030257.8|Cachd1|ENSMUSG00000028532.8|cache domain containing 1 	ENSMUST00000097955.2|Cachd1|ENSMUSG00000028532.8|cache domain containing 1
mm10_v2_chr4_-_86612009_86612062	0.911959	Pitx2_Otx2	ENSMUST00000125481.1|Haus6|ENSMUSG00000038047.12|HAUS augmin-like complex, subunit 6 	ENSMUST00000070607.7|Haus6|ENSMUSG00000038047.12|HAUS augmin-like complex, subunit 6
mm10_v2_chr5_+_115559467_115559499	0.91033	Pitx2_Otx2	ENSMUST00000086519.5|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0
mm10_v2_chrX_-_166479633_166479707	0.90876	Pitx2_Otx2	ENSMUST00000049435.8|Rab9|ENSMUSG00000079316.4|RAB9, member RAS oncogene family
mm10_v2_chr2_-_180954620_180954670	0.908037	Pitx2_Otx2	ENSMUST00000139929.1|Nkain4|ENSMUSG00000027574.9|Na+/K+ transporting ATPase interacting 4
mm10_v2_chr5_+_123228190_123228301	0.907077	Pitx2_Otx2	ENSMUST00000100729.4|Psmd9|ENSMUSG00000029440.11|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
mm10_v2_chr10_-_93081596_93081644	0.904269	Pitx2_Otx2	ENSMUST00000168617.1|Gm872|ENSMUSG00000020014.9|RIKEN cDNA 4930485B16 gene 	ENSMUST00000168110.1|Gm872|ENSMUSG00000020014.9|RIKEN cDNA 4930485B16 gene 	ENSMUST00000020200.7|Gm872|ENSMUSG00000020014.9|RIKEN cDNA 4930485B16 gene
mm10_v2_chr5_-_127617372_127617426	0.901967	Pitx2_Otx2	ENSMUST00000031367.8|Slc15a4|ENSMUSG00000029416.11|solute carrier family 15, member 4
mm10_v2_chr17_-_53539411_53539459	0.898921	Pitx2_Otx2	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr9_-_60838200_60838200	0.895322	Pitx2_Otx2	ENSMUST00000063858.7|Gm9869|ENSMUSG00000052143.7|predicted gene 9869
mm10_v2_chr11_+_96789118_96789146	0.893716	Pitx2_Otx2	ENSMUST00000018810.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr6_-_114969986_114970006	0.89344	Pitx2_Otx2	ENSMUST00000139640.1|Vgll4|ENSMUSG00000030315.9|vestigial like 4 (Drosophila)
mm10_v2_chrX_-_74353575_74353622	0.891922	Pitx2_Otx2	ENSMUST00000114152.1|Lage3|ENSMUSG00000015289.4|L antigen family, member 3 	ENSMUST00000114153.1|Lage3|ENSMUSG00000015289.4|L antigen family, member 3 	ENSMUST00000015433.3|Lage3|ENSMUSG00000015289.4|L antigen family, member 3
mm10_v2_chr15_-_89425856_89425872	0.88848	Pitx2_Otx2	ENSMUST00000109313.2|Cpt1b|ENSMUSG00000078937.2|carnitine palmitoyltransferase 1b, muscle
mm10_v2_chr11_+_3963970_3963983	0.887499	Pitx2_Otx2	ENSMUST00000020705.4|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish) 	ENSMUST00000109985.1|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm10_v2_chr17_+_33629408_33629448	0.886783	Pitx2_Otx2	ENSMUST00000165504.1|Zfp414|ENSMUSG00000073423.3|zinc finger protein 414
mm10_v2_chr13_+_14613242_14613272	0.883518	Pitx2_Otx2	ENSMUST00000170836.2|Psma2|ENSMUSG00000015671.10|proteasome (prosome, macropain) subunit, alpha type 2
mm10_v2_chr13_+_41001002_41001052	0.883107	Pitx2_Otx2	ENSMUST00000046951.9|Pak1ip1|ENSMUSG00000038683.9|PAK1 interacting protein 1
mm10_v2_chr11_-_59787636_59787683	0.882521	Pitx2_Otx2	ENSMUST00000125307.1|Pld6|ENSMUSG00000043648.7|phospholipase D family, member 6
mm10_v2_chr6_+_48860339_48860358	0.880471	Pitx2_Otx2	ENSMUST00000101425.3|Gm7932|ENSMUSG00000073090.3|predicted gene 7932
mm10_v2_chr7_-_100656953_100657103	0.875204	Pitx2_Otx2	ENSMUST00000107046.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1 	ENSMUST00000107045.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1 	ENSMUST00000139708.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1
mm10_v2_chr2_-_130629994_130630038	0.874586	Pitx2_Otx2	ENSMUST00000110262.1|Fastkd5|ENSMUSG00000079043.2|FAST kinase domains 5 	ENSMUST00000028761.4|Ubox5|ENSMUSG00000027300.9|U box domain containing 5
mm10_v2_chr1_-_119913162_119913208	0.87435	Pitx2_Otx2	ENSMUST00000037906.5|Tmem177|ENSMUSG00000036975.5|transmembrane protein 177
mm10_v2_chr4_+_152325831_152325876	0.870585	Pitx2_Otx2	ENSMUST00000103191.4|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22 	ENSMUST00000139685.1|Rpl22|ENSMUSG00000028936.9|ribosomal protein L22
mm10_v2_chr7_-_34168516_34168582	0.869152	Pitx2_Otx2	ENSMUST00000102746.4|Uba2|ENSMUSG00000052997.9|ubiquitin-like modifier activating enzyme 2
mm10_v2_chr14_-_8172986_8173003	0.867469	Pitx2_Otx2	ENSMUST00000022268.8|Pdhb|ENSMUSG00000021748.8|pyruvate dehydrogenase (lipoamide) beta
mm10_v2_chr19_-_47536997_47537119	0.864476	Pitx2_Otx2	ENSMUST00000182808.1|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1 	ENSMUST00000049369.9|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1
mm10_v2_chr2_+_163122605_163122620	0.859206	Pitx2_Otx2	ENSMUST00000144092.1|Gm11454|ENSMUSG00000086152.1|predicted gene 11454
mm10_v2_chr7_-_25297866_25297958	0.858437	Pitx2_Otx2	ENSMUST00000148150.1|Pafah1b3|ENSMUSG00000005447.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 	ENSMUST00000155118.1|Pafah1b3|ENSMUSG00000005447.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
mm10_v2_chr4_-_45489794_45489794	0.857771	Pitx2_Otx2	ENSMUST00000146236.1|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr11_-_100620165_100620209	0.857645	Pitx2_Otx2	ENSMUST00000014339.8|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr8_+_124231359_124231450	0.85488	Pitx2_Otx2	ENSMUST00000034458.8|Galnt2|ENSMUSG00000089704.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm10_v2_chr5_+_124483458_124483491	0.840701	Pitx2_Otx2	ENSMUST00000111453.1|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr8_+_31111816_31111891	0.837946	Pitx2_Otx2	ENSMUST00000046941.7|Rnf122|ENSMUSG00000039328.9|ring finger protein 122
mm10_v2_chr4_-_123718181_123718195	0.835021	Pitx2_Otx2	ENSMUST00000137312.1|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5 	ENSMUST00000106206.1|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5
mm10_v2_chr4_-_129578535_129578560	0.832568	Pitx2_Otx2	ENSMUST00000052835.8|Fam167b|ENSMUSG00000050493.8|family with sequence similarity 167, member B
mm10_v2_chr11_+_54866413_54866481	0.832111	Pitx2_Otx2	ENSMUST00000117710.1|Hint1|ENSMUSG00000020267.6|histidine triad nucleotide binding protein 1
mm10_v2_chr14_-_96519067_96519102	0.826117	Pitx2_Otx2	ENSMUST00000022666.7|Klhl1|ENSMUSG00000022076.9|kelch-like 1
mm10_v2_chr10_+_58394381_58394395	0.81795	Pitx2_Otx2	ENSMUST00000105468.1|Lims1|ENSMUSG00000019920.11|LIM and senescent cell antigen-like domains 1
mm10_v2_chr9_-_58249702_58249791	0.81597	Pitx2_Otx2	ENSMUST00000135310.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000085673.4|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000114136.2|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000153820.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000124982.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia
mm10_v2_chr15_+_103503261_103503298	0.814207	Pitx2_Otx2	ENSMUST00000023132.3|Pde1b|ENSMUSG00000022489.5|phosphodiesterase 1B, Ca2+-calmodulin dependent
mm10_v2_chr4_-_86670030_86670060	0.808086	Pitx2_Otx2	ENSMUST00000000466.6|Plin2|ENSMUSG00000028494.6|perilipin 2
mm10_v2_chr17_+_34898463_34898501	0.807092	Pitx2_Otx2	ENSMUST00000114033.2|Ehmt2|ENSMUSG00000013787.9|euchromatic histone lysine N-methyltransferase 2 	ENSMUST00000078061.6|Ehmt2|ENSMUSG00000013787.9|euchromatic histone lysine N-methyltransferase 2
mm10_v2_chr8_+_13785615_13785661	0.805888	Pitx2_Otx2	ENSMUST00000043767.7|Upf3a|ENSMUSG00000038398.7|UPF3 regulator of nonsense transcripts homolog A (yeast)
mm10_v2_chr5_-_93206489_93206498	0.803945	Pitx2_Otx2	ENSMUST00000058550.8|Ccni|ENSMUSG00000063015.6|cyclin I
mm10_v2_chr5_-_21055880_21055961	0.801059	Pitx2_Otx2	ENSMUST00000030556.7|Ptpn12|ENSMUSG00000028771.7|protein tyrosine phosphatase, non-receptor type 12
mm10_v2_chr3_-_146108047_146108130	0.799165	Pitx2_Otx2	ENSMUST00000160285.1|Wdr63|ENSMUSG00000043020.7|WD repeat domain 63
mm10_v2_chr2_+_155236529_155236599	0.794482	Pitx2_Otx2	ENSMUST00000109682.2|Dynlrb1|ENSMUSG00000047459.8|dynein light chain roadblock-type 1
mm10_v2_chr17_+_35439155_35439195	0.793928	Pitx2_Otx2	ENSMUST00000071951.6|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7 	ENSMUST00000078205.7|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7 	ENSMUST00000116598.3|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7 	ENSMUST00000076256.7|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7
mm10_v2_chr10_-_7780866_7780923	0.791892	Pitx2_Otx2	ENSMUST00000124838.1|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1 	ENSMUST00000039763.7|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1
mm10_v2_chr6_+_87009836_87009893	0.788262	Pitx2_Otx2	ENSMUST00000032060.8|Nfu1|ENSMUSG00000029993.10|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENSMUST00000117583.1|Nfu1|ENSMUSG00000029993.10|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENSMUST00000144776.1|Nfu1|ENSMUSG00000029993.10|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
mm10_v2_chr7_-_141655319_141655395	0.788041	Pitx2_Otx2	ENSMUST00000062451.7|Muc6|ENSMUSG00000048191.9|mucin 6, gastric
mm10_v2_chr7_-_141172809_141172862	0.77674	Pitx2_Otx2	ENSMUST00000167493.1|Rnh1|ENSMUSG00000038650.8|ribonuclease/angiogenin inhibitor 1
mm10_v2_chr16_-_4790220_4790300	0.776145	Pitx2_Otx2	ENSMUST00000118703.1|Cdip1|ENSMUSG00000004071.6|cell death inducing Trp53 target 1
mm10_v2_chr15_-_81871883_81871916	0.775867	Pitx2_Otx2	ENSMUST00000023117.8|Phf5a|ENSMUSG00000061360.7|PHD finger protein 5A
mm10_v2_chr8_-_105568298_105568298	0.77433	Pitx2_Otx2	ENSMUST00000005849.5|Agrp|ENSMUSG00000005705.5|agouti related protein
mm10_v2_chr15_+_76701455_76701542	0.768389	Pitx2_Otx2	ENSMUST00000019224.7|Mfsd3|ENSMUSG00000019080.7|major facilitator superfamily domain containing 3
mm10_v2_chr10_+_80172934_80172961	0.764916	Pitx2_Otx2	ENSMUST00000041882.6|1600002K03Rik|ENSMUSG00000035595.6|RIKEN cDNA 1600002K03 gene
mm10_v2_chr6_+_72544391_72544537	0.764662	Pitx2_Otx2	ENSMUST00000071044.6|Capg|ENSMUSG00000056737.8|capping protein (actin filament), gelsolin-like 	ENSMUST00000114072.1|Capg|ENSMUSG00000056737.8|capping protein (actin filament), gelsolin-like
mm10_v2_chr19_-_8798495_8798565	0.764188	Pitx2_Otx2	ENSMUST00000096261.3|Polr2g|ENSMUSG00000071662.3|polymerase (RNA) II (DNA directed) polypeptide G
mm10_v2_chr11_-_119355484_119355536	0.762388	Pitx2_Otx2	ENSMUST00000100172.2|Sgsh|ENSMUSG00000005043.7|N-sulfoglucosamine sulfohydrolase (sulfamidase) 	ENSMUST00000005173.4|Sgsh|ENSMUSG00000005043.7|N-sulfoglucosamine sulfohydrolase (sulfamidase)
mm10_v2_chr6_+_114643094_114643105	0.758416	Pitx2_Otx2	ENSMUST00000032457.10|Atg7|ENSMUSG00000030314.10|autophagy related 7
mm10_v2_chr7_+_126976338_126976400	0.752905	Pitx2_Otx2	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr3_-_36000662_36000682	0.748948	Pitx2_Otx2	ENSMUST00000029259.3|Mccc1|ENSMUSG00000027709.3|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
mm10_v2_chr2_+_155236602_155236617	0.745254	Pitx2_Otx2	ENSMUST00000150602.1|Dynlrb1|ENSMUSG00000047459.8|dynein light chain roadblock-type 1
mm10_v2_chr5_+_122210134_122210295	0.744963	Pitx2_Otx2	ENSMUST00000100747.2|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1
mm10_v2_chr6_-_126849109_126849144	0.739729	Pitx2_Otx2	ENSMUST00000088194.4|Ndufa9|ENSMUSG00000000399.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9
mm10_v2_chr2_-_166581969_166582071	0.73738	Pitx2_Otx2	ENSMUST00000109246.1|Prex1|ENSMUSG00000039621.7|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
mm10_v2_chr15_+_102326116_102326152	0.735381	Pitx2_Otx2	ENSMUST00000166658.1|Pfdn5|ENSMUSG00000001289.6|prefoldin 5 	ENSMUST00000062492.4|Pfdn5|ENSMUSG00000001289.6|prefoldin 5
mm10_v2_chr5_-_74065736_74065758	0.734323	Pitx2_Otx2	ENSMUST00000145016.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr3_-_73708399_73708423	0.734259	Pitx2_Otx2	ENSMUST00000029367.5|Bche|ENSMUSG00000027792.5|butyrylcholinesterase
mm10_v2_chr15_-_83122756_83122801	0.731959	Pitx2_Otx2	ENSMUST00000018184.3|Rrp7a|ENSMUSG00000018040.3|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm10_v2_chrY_-_10643315_10643315	0.731643	Pitx2_Otx2	ENSMUST00000100115.1|Gm20775|ENSMUSG00000075359.1|predicted gene, 20775
mm10_v2_chr11_+_87699897_87699897	0.729066	Pitx2_Otx2	ENSMUST00000040089.4|Rnf43|ENSMUSG00000034177.9|ring finger protein 43
mm10_v2_chr7_+_12897800_12897885	0.72812	Pitx2_Otx2	ENSMUST00000055528.4|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000117189.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000120809.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000119989.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22
mm10_v2_chr7_-_126377401_126377450	0.728052	Pitx2_Otx2	ENSMUST00000119846.1|Spns1|ENSMUSG00000030741.9|spinster homolog 1 	ENSMUST00000119754.1|Spns1|ENSMUSG00000030741.9|spinster homolog 1 	ENSMUST00000032994.8|Spns1|ENSMUSG00000030741.9|spinster homolog 1
mm10_v2_chr3_+_129881149_129881188	0.72727	Pitx2_Otx2	ENSMUST00000061165.7|Pla2g12a|ENSMUSG00000027999.9|phospholipase A2, group XIIA
mm10_v2_chr11_+_101253707_101253757	0.726319	Pitx2_Otx2	ENSMUST00000007533.8|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast) 	ENSMUST00000042477.6|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast) 	ENSMUST00000100414.5|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast) 	ENSMUST00000107280.4|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast) 	ENSMUST00000121331.1|Vps25|ENSMUSG00000078656.5|vacuolar protein sorting 25 (yeast)
mm10_v2_chr5_+_38260372_38260386	0.725642	Pitx2_Otx2	ENSMUST00000119047.1|Tmem128|ENSMUSG00000067365.4|transmembrane protein 128
mm10_v2_chr3_-_92083132_92083147	0.725323	Pitx2_Otx2	ENSMUST00000058150.6|Lor|ENSMUSG00000043165.6|loricrin
mm10_v2_chr4_-_32923455_32923530	0.724609	Pitx2_Otx2	ENSMUST00000035719.4|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6 	ENSMUST00000084749.1|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6
mm10_v2_chr18_+_3507945_3507964	0.718881	Pitx2_Otx2	ENSMUST00000025075.1|Bambi|ENSMUSG00000024232.1|BMP and activin membrane-bound inhibitor
mm10_v2_chr9_-_108567336_108567359	0.712412	Pitx2_Otx2	ENSMUST00000074208.4|Ndufaf3|ENSMUSG00000070283.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
mm10_v2_chr5_+_129895723_129895800	0.712397	Pitx2_Otx2	ENSMUST00000041466.7|2410018M08Rik|ENSMUSG00000034173.7|RIKEN cDNA 2410018M08 gene 	ENSMUST00000077320.2|2410018M08Rik|ENSMUSG00000034173.7|RIKEN cDNA 2410018M08 gene
mm10_v2_chr5_+_114786045_114786045	0.70928	Pitx2_Otx2	ENSMUST00000137519.1|Ankrd13a|ENSMUSG00000041870.10|ankyrin repeat domain 13a
mm10_v2_chr14_+_73510014_73510055	0.708285	Pitx2_Otx2	ENSMUST00000022705.5|Med4|ENSMUSG00000022109.5|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)
mm10_v2_chr15_+_102407144_102407269	0.698522	Pitx2_Otx2	ENSMUST00000169619.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr3_+_129878571_129878704	0.696529	Pitx2_Otx2	ENSMUST00000029629.8|Pla2g12a|ENSMUSG00000027999.9|phospholipase A2, group XIIA
mm10_v2_chr1_-_4785671_4785744	0.693894	Pitx2_Otx2	ENSMUST00000130201.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15 	ENSMUST00000156816.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15
mm10_v2_chr19_-_7206234_7206316	0.693759	Pitx2_Otx2	ENSMUST00000123594.1|Otub1|ENSMUSG00000024767.5|OTU domain, ubiquitin aldehyde binding 1 	ENSMUST00000025679.4|Otub1|ENSMUSG00000024767.5|OTU domain, ubiquitin aldehyde binding 1
mm10_v2_chr7_+_127983079_127983079	0.690272	Pitx2_Otx2	ENSMUST00000079045.2|B230325K18Rik|ENSMUSG00000063254.2|RIKEN cDNA B230325K18 gene
mm10_v2_chr19_+_6335093_6335113	0.680186	Pitx2_Otx2	ENSMUST00000078137.5|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1
mm10_v2_chrX_-_36874111_36874111	0.678142	Pitx2_Otx2	ENSMUST00000047486.5|C330007P06Rik|ENSMUSG00000006423.9|RIKEN cDNA C330007P06 gene
mm10_v2_chr10_-_76110956_76110962	0.676295	Pitx2_Otx2	ENSMUST00000120757.1|Slc5a4b|ENSMUSG00000020226.9|solute carrier family 5 (neutral amino acid transporters, system A), member 4b
mm10_v2_chr16_+_13819251_13819369	0.673913	Pitx2_Otx2	ENSMUST00000023362.8|Ntan1|ENSMUSG00000022681.8|N-terminal Asn amidase 	ENSMUST00000115805.1|Ntan1|ENSMUSG00000022681.8|N-terminal Asn amidase
mm10_v2_chr7_+_120635176_120635251	0.673248	Pitx2_Otx2	ENSMUST00000033176.5|Uqcrc2|ENSMUSG00000030884.5|ubiquinol cytochrome c reductase core protein 2
mm10_v2_chr12_-_85280361_85280435	0.670136	Pitx2_Otx2	ENSMUST00000065913.7|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type 	ENSMUST00000008966.6|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr3_+_4211716_4211716	0.665179	Pitx2_Otx2	ENSMUST00000170943.1|Gm8775|ENSMUSG00000091223.1|predicted gene 8775
mm10_v2_chr8_+_83566671_83566815	0.661597	Pitx2_Otx2	ENSMUST00000036996.5|Ndufb7|ENSMUSG00000033938.5|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7
mm10_v2_chr11_-_100527862_100527878	0.659692	Pitx2_Otx2	ENSMUST00000107385.1|Acly|ENSMUSG00000020917.11|ATP citrate lyase
mm10_v2_chr12_+_83950608_83950705	0.6582	Pitx2_Otx2	ENSMUST00000053744.7|2410016O06Rik|ENSMUSG00000046791.7|RIKEN cDNA 2410016O06 gene
mm10_v2_chr2_-_25211367_25211489	0.657727	Pitx2_Otx2	ENSMUST00000059849.8|Nelfb|ENSMUSG00000013465.12|negative elongation factor complex member B, Cobra1
mm10_v2_chr15_+_41789495_41789527	0.6535	Pitx2_Otx2	ENSMUST00000090095.5|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000022918.7|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr5_+_149184678_149184740	0.653371	Pitx2_Otx2	ENSMUST00000139474.1|Uspl1|ENSMUSG00000041264.10|ubiquitin specific peptidase like 1 	ENSMUST00000117878.1|Uspl1|ENSMUSG00000041264.10|ubiquitin specific peptidase like 1
mm10_v2_chr2_+_61711694_61711786	0.651884	Pitx2_Otx2	ENSMUST00000028278.7|Psmd14|ENSMUSG00000026914.9|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
mm10_v2_chr11_-_121229293_121229322	0.64979	Pitx2_Otx2	ENSMUST00000106115.1|BC017643|ENSMUSG00000039294.8|cDNA sequence BC017643 	ENSMUST00000038709.7|BC017643|ENSMUSG00000039294.8|cDNA sequence BC017643 	ENSMUST00000147490.1|BC017643|ENSMUSG00000039294.8|cDNA sequence BC017643
mm10_v2_chr2_-_29787622_29787680	0.646725	Pitx2_Otx2	ENSMUST00000177467.1|Trub2|ENSMUSG00000039826.7|TruB pseudouridine (psi) synthase homolog 2 (E. coli) 	ENSMUST00000113807.3|Trub2|ENSMUSG00000039826.7|TruB pseudouridine (psi) synthase homolog 2 (E. coli)
mm10_v2_chr14_-_77036081_77036081	0.64658	Pitx2_Otx2	ENSMUST00000142300.1|Lacc1|ENSMUSG00000044350.8|laccase (multicopper oxidoreductase) domain containing 1
mm10_v2_chr4_+_45203921_45203931	0.643848	Pitx2_Otx2	ENSMUST00000107804.1|Frmpd1|ENSMUSG00000035615.6|FERM and PDZ domain containing 1
mm10_v2_chr12_-_119238794_119238863	0.642915	Pitx2_Otx2	ENSMUST00000026360.8|Itgb8|ENSMUSG00000025321.8|integrin beta 8
mm10_v2_chr2_+_30133746_30133806	0.641468	Pitx2_Otx2	ENSMUST00000044556.5|Tbc1d13|ENSMUSG00000039678.6|TBC1 domain family, member 13
mm10_v2_chr17_+_33824591_33824644	0.639445	Pitx2_Otx2	ENSMUST00000048249.6|Ndufa7|ENSMUSG00000041881.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)
mm10_v2_chr5_+_138116903_138117041	0.638541	Pitx2_Otx2	ENSMUST00000062350.8|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110961.2|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000080732.3|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110960.2|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000142185.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000136425.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110959.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21
mm10_v2_chr9_+_37401897_37401980	0.637517	Pitx2_Otx2	ENSMUST00000115048.1|Robo4|ENSMUSG00000032125.13|roundabout homolog 4 (Drosophila)
mm10_v2_chr7_+_102223021_102223076	0.636973	Pitx2_Otx2	ENSMUST00000156529.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000138479.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000126914.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000033292.7|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2 	ENSMUST00000146559.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2
mm10_v2_chr7_-_19770509_19770547	0.630658	Pitx2_Otx2	ENSMUST00000003061.7|Bcam|ENSMUSG00000002980.8|basal cell adhesion molecule
mm10_v2_chr4_+_155831272_155831351	0.629996	Pitx2_Otx2	ENSMUST00000139651.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000084097.5|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
mm10_v2_chr12_+_70974621_70974686	0.628619	Pitx2_Otx2	ENSMUST00000160027.1|Psma3|ENSMUSG00000060073.3|proteasome (prosome, macropain) subunit, alpha type 3 	ENSMUST00000160864.1|Psma3|ENSMUSG00000060073.3|proteasome (prosome, macropain) subunit, alpha type 3
mm10_v2_chr9_+_15306212_15306219	0.623204	Pitx2_Otx2	ENSMUST00000034415.5|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D 	ENSMUST00000164079.1|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D
mm10_v2_chr6_+_100833606_100833663	0.620072	Pitx2_Otx2	ENSMUST00000063854.4|Ppp4r2|ENSMUSG00000052144.6|protein phosphatase 4, regulatory subunit 2
mm10_v2_chr18_+_36760214_36760292	0.617736	Pitx2_Otx2	ENSMUST00000049323.7|Wdr55|ENSMUSG00000042660.7|WD repeat domain 55
mm10_v2_chr17_-_8566869_8566869	0.61656	Pitx2_Otx2	ENSMUST00000184183.1|Gm17087|ENSMUSG00000099104.1|predicted gene 17087
mm10_v2_chr11_-_86257518_86257550	0.614345	Pitx2_Otx2	ENSMUST00000136469.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000018212.6|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr17_+_46711459_46711497	0.613779	Pitx2_Otx2	ENSMUST00000002840.8|Pex6|ENSMUSG00000002763.10|peroxisomal biogenesis factor 6
mm10_v2_chr4_-_135987182_135987269	0.61112	Pitx2_Otx2	ENSMUST00000105851.2|Pithd1|ENSMUSG00000028669.9|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
mm10_v2_chr8_+_70539675_70539710	0.611095	Pitx2_Otx2	ENSMUST00000093454.6|Ell|ENSMUSG00000070002.6|elongation factor RNA polymerase II
mm10_v2_chr7_-_6155939_6155971	0.611032	Pitx2_Otx2	ENSMUST00000094870.1|Zfp787|ENSMUSG00000046792.7|zinc finger protein 787
mm10_v2_chr11_+_120672992_120673009	0.609805	Pitx2_Otx2	ENSMUST00000026135.8|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm10_v2_chr7_-_90457167_90457229	0.609254	Pitx2_Otx2	ENSMUST00000032844.5|Tmem126a|ENSMUSG00000030615.5|transmembrane protein 126A
mm10_v2_chr2_-_132247623_132247654	0.608298	Pitx2_Otx2	ENSMUST00000110164.1|Tmem230|ENSMUSG00000027341.4|transmembrane protein 230
mm10_v2_chr6_+_125192154_125192170	0.607575	Pitx2_Otx2	ENSMUST00000032485.5|Mrpl51|ENSMUSG00000030335.5|mitochondrial ribosomal protein L51
mm10_v2_chr2_+_166793767_166793813	0.605743	Pitx2_Otx2	ENSMUST00000151826.1|Trp53rk|ENSMUSG00000042854.9|transformation related protein 53 regulating kinase
mm10_v2_chr9_-_75559604_75559665	0.604924	Pitx2_Otx2	ENSMUST00000072232.7|Tmod3|ENSMUSG00000058587.7|tropomodulin 3
mm10_v2_chr7_+_27452417_27452469	0.603604	Pitx2_Otx2	ENSMUST00000108357.1|Blvrb|ENSMUSG00000040466.9|biliverdin reductase B (flavin reductase (NADPH))
mm10_v2_chr6_+_113442569_113442627	0.603177	Pitx2_Otx2	ENSMUST00000101070.4|Jagn1|ENSMUSG00000051256.9|jagunal homolog 1 (Drosophila)
mm10_v2_chr7_+_128744870_128745020	0.603123	Pitx2_Otx2	ENSMUST00000042942.8|Sec23ip|ENSMUSG00000055319.7|Sec23 interacting protein
mm10_v2_chr2_-_119208767_119208802	0.60116	Pitx2_Otx2	ENSMUST00000038439.3|Dnajc17|ENSMUSG00000034278.3|DnaJ (Hsp40) homolog, subfamily C, member 17
mm10_v2_chr6_-_86733268_86733394	0.597018	Pitx2_Otx2	ENSMUST00000001185.7|Gmcl1|ENSMUSG00000001157.7|germ cell-less homolog 1 (Drosophila)
mm10_v2_chr2_+_76675265_76675287	0.596085	Pitx2_Otx2	ENSMUST00000111920.1|Plekha3|ENSMUSG00000002733.8|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm10_v2_chr12_-_54695885_54695897	0.592386	Pitx2_Otx2	ENSMUST00000067272.8|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr5_+_139253489_139253519	0.591156	Pitx2_Otx2	ENSMUST00000138508.1|Get4|ENSMUSG00000025858.6|golgi to ER traffic protein 4 homolog (S. cerevisiae) 	ENSMUST00000110878.1|Get4|ENSMUSG00000025858.6|golgi to ER traffic protein 4 homolog (S. cerevisiae)
mm10_v2_chr1_+_181150926_181150984	0.590237	Pitx2_Otx2	ENSMUST00000134115.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila) 	ENSMUST00000111059.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila)
mm10_v2_chr13_-_107414742_107414767	0.588456	Pitx2_Otx2	ENSMUST00000061241.6|Apoo-ps|ENSMUSG00000049233.6|apolipoprotein O, pseudogene
mm10_v2_chr8_-_111992258_111992302	0.587299	Pitx2_Otx2	ENSMUST00000034427.5|Adat1|ENSMUSG00000031949.11|adenosine deaminase, tRNA-specific 1 	ENSMUST00000139820.1|Adat1|ENSMUSG00000031949.11|adenosine deaminase, tRNA-specific 1
mm10_v2_chr6_+_79818031_79818031	0.584906	Pitx2_Otx2	ENSMUST00000179797.1|Gm20594|ENSMUSG00000096887.1|predicted gene, 20594
mm10_v2_chr3_-_88739692_88739692	0.580531	Pitx2_Otx2	ENSMUST00000090946.2|Gm10253|ENSMUSG00000068924.2|predicted gene 10253
mm10_v2_chr14_+_52279132_52279188	0.577864	Pitx2_Otx2	ENSMUST00000022766.6|Tox4|ENSMUSG00000016831.11|TOX high mobility group box family member 4
mm10_v2_chr9_+_120110349_120110418	0.573746	Pitx2_Otx2	ENSMUST00000035106.5|Slc25a38|ENSMUSG00000032519.5|solute carrier family 25, member 38
mm10_v2_chr14_-_50785518_50785518	0.572611	Pitx2_Otx2	ENSMUST00000006451.6|Ttc5|ENSMUSG00000006288.7|tetratricopeptide repeat domain 5
mm10_v2_chr11_+_120677226_120677355	0.56199	Pitx2_Otx2	ENSMUST00000129644.2|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000151160.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm10_v2_chr13_-_23430826_23431022	0.561348	Pitx2_Otx2	ENSMUST00000153753.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene 	ENSMUST00000141543.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene
mm10_v2_chr9_+_69397897_69397928	0.560251	Pitx2_Otx2	ENSMUST00000034761.8|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000125938.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2
mm10_v2_chr10_-_40257648_40257687	0.556113	Pitx2_Otx2	ENSMUST00000019982.7|Gtf3c6|ENSMUSG00000019837.7|general transcription factor IIIC, polypeptide 6, alpha
mm10_v2_chr1_+_171213969_171214007	0.553192	Pitx2_Otx2	ENSMUST00000005820.4|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3 	ENSMUST00000075469.5|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3 	ENSMUST00000155126.1|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3
mm10_v2_chr17_+_35424870_35424885	0.550729	Pitx2_Otx2	ENSMUST00000113879.3|H2-Q6|ENSMUSG00000073409.6|histocompatibility 2, Q region locus 6
mm10_v2_chr1_-_86582500_86582565	0.546715	Pitx2_Otx2	ENSMUST00000027444.8|Pde6d|ENSMUSG00000026239.8|phosphodiesterase 6D, cGMP-specific, rod, delta 	ENSMUST00000146220.1|Pde6d|ENSMUSG00000026239.8|phosphodiesterase 6D, cGMP-specific, rod, delta
mm10_v2_chr8_+_83715239_83715288	0.546219	Pitx2_Otx2	ENSMUST00000172396.1|Ddx39|ENSMUSG00000005481.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm10_v2_chr15_+_99392882_99392903	0.534695	Pitx2_Otx2	ENSMUST00000023749.8|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr10_-_62602261_62602298	0.534666	Pitx2_Otx2	ENSMUST00000045866.7|Ddx21|ENSMUSG00000020075.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
mm10_v2_chr7_-_100583072_100583124	0.528864	Pitx2_Otx2	ENSMUST00000152876.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48 	ENSMUST00000150042.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48
mm10_v2_chr5_-_75044562_75044774	0.52779	Pitx2_Otx2	ENSMUST00000075452.5|Chic2|ENSMUSG00000029229.7|cysteine-rich hydrophobic domain 2
mm10_v2_chrX_-_56822308_56822346	0.527475	Pitx2_Otx2	ENSMUST00000135542.1|Mtap7d3|ENSMUSG00000067878.7|MAP7 domain containing 3 	ENSMUST00000114766.1|Mtap7d3|ENSMUSG00000067878.7|MAP7 domain containing 3
mm10_v2_chr9_-_50528641_50528698	0.527127	Pitx2_Otx2	ENSMUST00000034570.5|Pts|ENSMUSG00000032067.5|6-pyruvoyl-tetrahydropterin synthase
mm10_v2_chr13_+_58281183_58281196	0.524181	Pitx2_Otx2	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr9_-_36797303_36797425	0.512433	Pitx2_Otx2	ENSMUST00000115086.5|Ei24|ENSMUSG00000062762.9|etoposide induced 2.4 mRNA
mm10_v2_chr15_-_89425795_89425851	0.50448	Pitx2_Otx2	ENSMUST00000168376.1|Cpt1b|ENSMUSG00000078937.2|carnitine palmitoyltransferase 1b, muscle
mm10_v2_chr3_-_86142684_86142702	0.501066	Pitx2_Otx2	ENSMUST00000029722.6|Rps3a1|ENSMUSG00000028081.6|ribosomal protein S3A1
mm10_v2_chr2_+_181497165_181497216	0.492402	Pitx2_Otx2	ENSMUST00000149163.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000000844.8|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000184849.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000108800.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000069712.2|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2
mm10_v2_chr10_+_7667503_7667558	0.492193	Pitx2_Otx2	ENSMUST00000040135.8|Nup43|ENSMUSG00000040034.9|nucleoporin 43
mm10_v2_chr4_-_132922547_132922563	0.490181	Pitx2_Otx2	ENSMUST00000030696.4|Fam76a|ENSMUSG00000028878.5|family with sequence similarity 76, member A
mm10_v2_chr15_-_98918131_98918231	0.487753	Pitx2_Otx2	ENSMUST00000023736.8|Lmbr1l|ENSMUSG00000022999.8|limb region 1 like
mm10_v2_chr2_+_30952955_30953016	0.486731	Pitx2_Otx2	ENSMUST00000028199.5|Tor1b|ENSMUSG00000026848.8|torsin family 1, member B
mm10_v2_chr10_-_22149270_22149270	0.484183	Pitx2_Otx2	ENSMUST00000179054.1|E030030I06Rik|ENSMUSG00000055657.8|RIKEN cDNA E030030I06 gene 	ENSMUST00000069372.6|E030030I06Rik|ENSMUSG00000055657.8|RIKEN cDNA E030030I06 gene
mm10_v2_chr5_-_125390176_125390222	0.48363	Pitx2_Otx2	ENSMUST00000156249.1|Ubc|ENSMUSG00000008348.9|ubiquitin C
mm10_v2_chr7_-_133122615_133122762	0.482272	Pitx2_Otx2	ENSMUST00000167218.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr9_-_67043832_67043843	0.481566	Pitx2_Otx2	ENSMUST00000113686.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr11_-_82908360_82908411	0.481266	Pitx2_Otx2	ENSMUST00000103213.3|Nle1|ENSMUSG00000020692.8|notchless homolog 1 (Drosophila)
mm10_v2_chr7_-_99238564_99238623	0.470574	Pitx2_Otx2	ENSMUST00000064231.7|Mogat2|ENSMUSG00000052396.7|monoacylglycerol O-acyltransferase 2
mm10_v2_chr11_-_69681903_69682084	0.466016	Pitx2_Otx2	ENSMUST00000066760.1|Senp3|ENSMUSG00000005204.6|SUMO/sentrin specific peptidase 3
mm10_v2_chr13_+_48968287_48968355	0.459181	Pitx2_Otx2	ENSMUST00000180775.1|Fam120aos|ENSMUSG00000097059.1|family with sequence similarity 120A opposite strand
mm10_v2_chr1_-_171360798_171360798	0.457715	Pitx2_Otx2	ENSMUST00000061878.4|Klhdc9|ENSMUSG00000045259.4|kelch domain containing 9
mm10_v2_chr11_-_107189325_107189381	0.456934	Pitx2_Otx2	ENSMUST00000018577.7|Nol11|ENSMUSG00000018433.8|nucleolar protein 11 	ENSMUST00000106757.1|Nol11|ENSMUSG00000018433.8|nucleolar protein 11
mm10_v2_chr19_-_4191035_4191069	0.456274	Pitx2_Otx2	ENSMUST00000045864.2|Tbc1d10c|ENSMUSG00000040247.5|TBC1 domain family, member 10c
mm10_v2_chr4_+_11123950_11123980	0.447302	Pitx2_Otx2	ENSMUST00000142297.1|Gm11827|ENSMUSG00000086765.1|predicted gene 11827
mm10_v2_chr11_-_116694802_116694882	0.443654	Pitx2_Otx2	ENSMUST00000079545.5|St6galnac2|ENSMUSG00000057286.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
mm10_v2_chr11_+_74770908_74770920	0.439729	Pitx2_Otx2	ENSMUST00000128504.1|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16
mm10_v2_chr10_-_58718210_58718210	0.434605	Pitx2_Otx2	ENSMUST00000169859.1|Gm17542|ENSMUSG00000091731.1|predicted gene, 17542
mm10_v2_chr5_-_134456227_134456263	0.42975	Pitx2_Otx2	ENSMUST00000111244.1|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1
mm10_v2_chr1_-_177796451_177796514	0.428343	Pitx2_Otx2	ENSMUST00000016105.8|Adss|ENSMUSG00000015961.8|adenylosuccinate synthetase, non muscle
mm10_v2_chr4_+_155582476_155582495	0.426034	Pitx2_Otx2	ENSMUST00000105612.1|Nadk|ENSMUSG00000029063.10|NAD kinase
mm10_v2_chr8_-_11478618_11478668	0.4229	Pitx2_Otx2	ENSMUST00000033900.5|Rab20|ENSMUSG00000031504.5|RAB20, member RAS oncogene family
mm10_v2_chr15_-_85811090_85811248	0.422644	Pitx2_Otx2	ENSMUST00000125947.1|Cdpf1|ENSMUSG00000064284.6|cysteine rich, DPF motif domain containing 1
mm10_v2_chr16_+_81200697_81200717	0.414541	Pitx2_Otx2	ENSMUST00000067602.3|Ncam2|ENSMUSG00000022762.11|neural cell adhesion molecule 2 	ENSMUST00000037785.7|Ncam2|ENSMUSG00000022762.11|neural cell adhesion molecule 2
mm10_v2_chr18_+_80206775_80206881	0.414222	Pitx2_Otx2	ENSMUST00000145963.1|Txnl4a|ENSMUSG00000057130.5|thioredoxin-like 4A 	ENSMUST00000125127.1|Gm16286|ENSMUSG00000024571.8|predicted gene 16286 	ENSMUST00000025464.7|Txnl4a|ENSMUSG00000057130.5|thioredoxin-like 4A 	ENSMUST00000025463.7|Gm16286|ENSMUSG00000024571.8|predicted gene 16286
mm10_v2_chr12_+_76072016_76072079	0.413434	Pitx2_Otx2	ENSMUST00000131480.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chr11_+_105178765_105178807	0.408541	Pitx2_Otx2	ENSMUST00000106939.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr9_-_36797273_36797293	0.407417	Pitx2_Otx2	ENSMUST00000163192.3|Ei24|ENSMUSG00000062762.9|etoposide induced 2.4 mRNA
mm10_v2_chr7_-_46958475_46958527	0.404658	Pitx2_Otx2	ENSMUST00000094398.4|Uevld|ENSMUSG00000043262.8|UEV and lactate/malate dehyrogenase domains
mm10_v2_chr8_-_105758570_105758664	0.403953	Pitx2_Otx2	ENSMUST00000155038.2|Gfod2|ENSMUSG00000013150.9|glucose-fructose oxidoreductase domain containing 2 	ENSMUST00000013294.9|Gfod2|ENSMUSG00000013150.9|glucose-fructose oxidoreductase domain containing 2
mm10_v2_chr10_+_43221505_43221600	0.401611	Pitx2_Otx2	ENSMUST00000159139.1|Pdss2|ENSMUSG00000038240.7|prenyl (solanesyl) diphosphate synthase, subunit 2
mm10_v2_chrX_+_56963325_56963325	0.400712	Pitx2_Otx2	ENSMUST00000096431.3|Gpr112|ENSMUSG00000053852.5|G protein-coupled receptor 112
mm10_v2_chr18_+_74216118_74216145	0.397066	Pitx2_Otx2	ENSMUST00000025444.6|Cxxc1|ENSMUSG00000024560.6|CXXC finger 1 (PHD domain)
mm10_v2_chr16_+_4741543_4741592	0.396982	Pitx2_Otx2	ENSMUST00000120232.1|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2
mm10_v2_chr11_+_80383309_80383336	0.392438	Pitx2_Otx2	ENSMUST00000108216.1|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr11_+_74770822_74770876	0.391403	Pitx2_Otx2	ENSMUST00000141755.1|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16 	ENSMUST00000010698.6|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16
mm10_v2_chr5_+_145083830_145083887	0.388421	Pitx2_Otx2	ENSMUST00000031625.8|Arpc1a|ENSMUSG00000029621.8|actin related protein 2/3 complex, subunit 1A
mm10_v2_chr17_-_35969724_35969785	0.386676	Pitx2_Otx2	ENSMUST00000043757.8|Abcf1|ENSMUSG00000038762.9|ATP-binding cassette, sub-family F (GCN20), member 1
mm10_v2_chr10_-_127311740_127311786	0.383985	Pitx2_Otx2	ENSMUST00000037290.5|Mars|ENSMUSG00000040354.8|methionine-tRNA synthetase 	ENSMUST00000171564.1|Mars|ENSMUSG00000040354.8|methionine-tRNA synthetase
mm10_v2_chr7_-_30194150_30194162	0.380096	Pitx2_Otx2	ENSMUST00000126116.1|Capns1|ENSMUSG00000001794.6|calpain, small subunit 1
mm10_v2_chr11_+_62648811_62648835	0.377357	Pitx2_Otx2	ENSMUST00000127589.1|Mmgt2|ENSMUSG00000048497.5|membrane magnesium transporter 2 	ENSMUST00000155759.2|Mmgt2|ENSMUSG00000048497.5|membrane magnesium transporter 2
mm10_v2_chr10_-_116549101_116549163	0.375885	Pitx2_Otx2	ENSMUST00000164088.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr12_+_109734969_109734985	0.373443	Pitx2_Otx2	ENSMUST00000182268.1|Mirg|ENSMUSG00000097391.2|miRNA containing gene 	ENSMUST00000181543.2|Mirg|ENSMUSG00000097391.2|miRNA containing gene 	ENSMUST00000183116.1|Mirg|ENSMUSG00000097391.2|miRNA containing gene
mm10_v2_chr15_-_55072139_55072161	0.373144	Pitx2_Otx2	ENSMUST00000041733.7|Taf2|ENSMUSG00000037343.7|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chrM_+_3906_3926	0.373143	Pitx2_Otx2	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr19_+_6334979_6335070	0.37248	Pitx2_Otx2	ENSMUST00000113504.3|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113502.3|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000079327.5|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000056391.8|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113501.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113500.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000166909.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1
mm10_v2_chr1_+_16665189_16665264	0.371409	Pitx2_Otx2	ENSMUST00000177501.1|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70 	ENSMUST00000065373.5|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70
mm10_v2_chr16_+_10812915_10812915	0.370279	Pitx2_Otx2	ENSMUST00000115822.1|Gm11172|ENSMUSG00000079740.1|predicted gene 11172
mm10_v2_chr5_+_115506668_115506808	0.36904	Pitx2_Otx2	ENSMUST00000067268.8|Pxn|ENSMUSG00000029528.11|paxillin 	ENSMUST00000086523.3|Pxn|ENSMUSG00000029528.11|paxillin
mm10_v2_chr11_-_109473220_109473294	0.368653	Pitx2_Otx2	ENSMUST00000070872.6|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr1_-_33669745_33669792	0.36618	Pitx2_Otx2	ENSMUST00000027312.9|Prim2|ENSMUSG00000026134.10|DNA primase, p58 subunit
mm10_v2_chr6_+_29859374_29859381	0.364028	Pitx2_Otx2	ENSMUST00000115238.3|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr7_+_45155865_45155943	0.361423	Pitx2_Otx2	ENSMUST00000107811.1|Pih1d1|ENSMUSG00000003423.8|PIH1 domain containing 1
mm10_v2_chr5_-_137611372_137611428	0.360784	Pitx2_Otx2	ENSMUST00000054564.6|Pcolce|ENSMUSG00000029718.8|procollagen C-endopeptidase enhancer protein
mm10_v2_chr10_-_81167896_81167923	0.360052	Pitx2_Otx2	ENSMUST00000005064.7|Pias4|ENSMUSG00000004934.7|protein inhibitor of activated STAT 4
mm10_v2_chr14_+_30549131_30549188	0.359303	Pitx2_Otx2	ENSMUST00000022529.6|Tkt|ENSMUSG00000021957.6|transketolase
mm10_v2_chr8_-_67818218_67818269	0.357576	Pitx2_Otx2	ENSMUST00000059374.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr4_-_117682233_117682279	0.355589	Pitx2_Otx2	ENSMUST00000102687.3|Dmap1|ENSMUSG00000009640.5|DNA methyltransferase 1-associated protein 1
mm10_v2_chr11_+_116848901_116848901	0.35438	Pitx2_Otx2	ENSMUST00000143184.1|Mettl23|ENSMUSG00000090266.4|methyltransferase like 23
mm10_v2_chr1_-_162859919_162859973	0.345557	Pitx2_Otx2	ENSMUST00000134098.1|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1 	ENSMUST00000111518.1|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1
mm10_v2_chr10_-_14718191_14718228	0.343362	Pitx2_Otx2	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr15_-_99370427_99370489	0.342926	Pitx2_Otx2	ENSMUST00000081224.7|Fmnl3|ENSMUSG00000023008.12|formin-like 3 	ENSMUST00000120633.1|Fmnl3|ENSMUSG00000023008.12|formin-like 3 	ENSMUST00000088233.6|Fmnl3|ENSMUSG00000023008.12|formin-like 3
mm10_v2_chr3_+_32515295_32515295	0.338802	Pitx2_Otx2	ENSMUST00000029203.7|Zfp639|ENSMUSG00000027667.8|zinc finger protein 639
mm10_v2_chrM_+_7759_7927	0.33732	Pitx2_Otx2	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr10_-_93891141_93891202	0.336968	Pitx2_Otx2	ENSMUST00000180840.1|Metap2|ENSMUSG00000036112.8|methionine aminopeptidase 2
mm10_v2_chr11_+_4160348_4160404	0.335909	Pitx2_Otx2	ENSMUST00000002198.3|Sf3a1|ENSMUSG00000002129.5|splicing factor 3a, subunit 1
mm10_v2_chr13_+_108046411_108046424	0.335817	Pitx2_Otx2	ENSMUST00000095458.4|Smim15|ENSMUSG00000071180.4|small integral membrane protein 15
mm10_v2_chr1_-_128417352_128417416	0.333962	Pitx2_Otx2	ENSMUST00000027602.8|Dars|ENSMUSG00000026356.9|aspartyl-tRNA synthetase 	ENSMUST00000064309.7|Dars|ENSMUSG00000026356.9|aspartyl-tRNA synthetase
mm10_v2_chr6_+_55037988_55038091	0.328838	Pitx2_Otx2	ENSMUST00000003572.8|Gars|ENSMUSG00000029777.9|glycyl-tRNA synthetase
mm10_v2_chr2_-_6130117_6130211	0.322535	Pitx2_Otx2	ENSMUST00000126551.1|Proser2|ENSMUSG00000045319.7|proline and serine rich 2 	ENSMUST00000054254.5|Proser2|ENSMUSG00000045319.7|proline and serine rich 2 	ENSMUST00000114942.2|Proser2|ENSMUSG00000045319.7|proline and serine rich 2
mm10_v2_chrX_-_157492280_157492340	0.322445	Pitx2_Otx2	ENSMUST00000112529.1|Sms|ENSMUSG00000071708.5|spermine synthase
mm10_v2_chr17_-_28622419_28622473	0.320364	Pitx2_Otx2	ENSMUST00000114767.1|Srpk1|ENSMUSG00000004865.9|serine/arginine-rich protein specific kinase 1
mm10_v2_chr5_+_124629050_124629097	0.318846	Pitx2_Otx2	ENSMUST00000037865.8|Atp6v0a2|ENSMUSG00000038023.8|ATPase, H+ transporting, lysosomal V0 subunit A2
mm10_v2_chr9_+_31386187_31386235	0.317802	Pitx2_Otx2	ENSMUST00000086167.5|Nfrkb|ENSMUSG00000042185.7|nuclear factor related to kappa B binding protein
mm10_v2_chr1_+_93685574_93685694	0.317133	Pitx2_Otx2	ENSMUST00000027499.6|Bok|ENSMUSG00000026278.8|BCL2-related ovarian killer protein
mm10_v2_chr5_+_121749196_121749196	0.313381	Pitx2_Otx2	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr4_-_151996113_151996258	0.307696	Pitx2_Otx2	ENSMUST00000055688.9|Phf13|ENSMUSG00000047777.9|PHD finger protein 13
mm10_v2_chr5_+_115605642_115605696	0.303144	Pitx2_Otx2	ENSMUST00000094427.3|Gcn1l1|ENSMUSG00000041638.12|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
mm10_v2_chr10_+_13501001_13501043	0.301267	Pitx2_Otx2	ENSMUST00000060212.6|Fuca2|ENSMUSG00000019810.9|fucosidase, alpha-L- 2, plasma 	ENSMUST00000121465.2|Fuca2|ENSMUSG00000019810.9|fucosidase, alpha-L- 2, plasma
mm10_v2_chr2_-_67194695_67194736	0.29973	Pitx2_Otx2	ENSMUST00000147939.1|Gm13598|ENSMUSG00000086908.1|predicted gene 13598
mm10_v2_chr8_+_58911755_58911755	0.295954	Pitx2_Otx2	ENSMUST00000062978.6|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr9_+_13765970_13766043	0.291308	Pitx2_Otx2	ENSMUST00000152532.1|Mtmr2|ENSMUSG00000031918.10|myotubularin related protein 2
mm10_v2_chr8_-_79399513_79399532	0.291087	Pitx2_Otx2	ENSMUST00000066091.7|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000109885.1|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000066081.3|Smad1|ENSMUSG00000031681.8|SMAD family member 1
mm10_v2_chr9_+_86695542_86695542	0.290581	Pitx2_Otx2	ENSMUST00000150367.2|A330041J22Rik|ENSMUSG00000087466.2|RIKEN cDNA A330041J22 gene
mm10_v2_chr1_+_167308649_167308670	0.290533	Pitx2_Otx2	ENSMUST00000097473.4|Tmco1|ENSMUSG00000052428.5|transmembrane and coiled-coil domains 1
mm10_v2_chr5_+_112326352_112326492	0.288411	Pitx2_Otx2	ENSMUST00000031288.7|Tfip11|ENSMUSG00000029345.7|tuftelin interacting protein 11 	ENSMUST00000129528.1|Tfip11|ENSMUSG00000029345.7|tuftelin interacting protein 11
mm10_v2_chr17_+_56005672_56005712	0.288159	Pitx2_Otx2	ENSMUST00000133998.1|Mpnd|ENSMUSG00000003199.10|MPN domain containing
mm10_v2_chr7_-_127014585_127014621	0.287685	Pitx2_Otx2	ENSMUST00000165096.2|Mvp|ENSMUSG00000030681.12|major vault protein
mm10_v2_chr17_-_51831884_51832019	0.285248	Pitx2_Otx2	ENSMUST00000124222.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr3_+_134828993_134829015	0.283912	Pitx2_Otx2	ENSMUST00000029822.4|Tacr3|ENSMUSG00000028172.4|tachykinin receptor 3
mm10_v2_chr2_-_6935081_6935081	0.283558	Pitx2_Otx2	ENSMUST00000100426.2|Gm10855|ENSMUSG00000075538.2|predicted gene 10855
mm10_v2_chr7_-_121981669_121981711	0.283313	Pitx2_Otx2	ENSMUST00000057576.7|Cog7|ENSMUSG00000034951.9|component of oligomeric golgi complex 7
mm10_v2_chr13_-_41220395_41220412	0.281398	Pitx2_Otx2	ENSMUST00000021793.7|Elovl2|ENSMUSG00000021364.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm10_v2_chr2_-_12419456_12419474	0.279991	Pitx2_Otx2	ENSMUST00000154899.1|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A 	ENSMUST00000028105.6|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A
mm10_v2_chr5_-_123012874_123012880	0.278695	Pitx2_Otx2	ENSMUST00000172729.1|Kdm2b|ENSMUSG00000029475.11|lysine (K)-specific demethylase 2B
mm10_v2_chr10_+_81384418_81384452	0.273435	Pitx2_Otx2	ENSMUST00000072751.6|Dohh|ENSMUSG00000078440.3|deoxyhypusine hydroxylase/monooxygenase
mm10_v2_chr17_-_57011271_57011326	0.268542	Pitx2_Otx2	ENSMUST00000002733.6|Gtf2f1|ENSMUSG00000002658.9|general transcription factor IIF, polypeptide 1
mm10_v2_chr11_-_109363654_109363654	0.266482	Pitx2_Otx2	ENSMUST00000070956.3|Gm11696|ENSMUSG00000056687.3|predicted gene 11696
mm10_v2_chr8_-_70527645_70527783	0.262157	Pitx2_Otx2	ENSMUST00000132867.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1
mm10_v2_chr19_-_7295394_7295468	0.260729	Pitx2_Otx2	ENSMUST00000025921.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr2_+_132686931_132686982	0.258586	Pitx2_Otx2	ENSMUST00000061891.4|1110034G24Rik|ENSMUSG00000044991.4|RIKEN cDNA 1110034G24 gene
mm10_v2_chr2_-_129371131_129371146	0.2563	Pitx2_Otx2	ENSMUST00000028881.7|Il1b|ENSMUSG00000027398.7|interleukin 1 beta
mm10_v2_chr4_+_147507600_147507600	0.254565	Pitx2_Otx2	ENSMUST00000063704.7|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chrX_-_111536325_111536342	0.254118	Pitx2_Otx2	ENSMUST00000156639.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr13_-_33935954_33936198	0.252758	Pitx2_Otx2	ENSMUST00000170991.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000171252.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000164627.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000017188.7|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000167163.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000043552.10|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm10_v2_chr2_-_35461247_35461271	0.250208	Pitx2_Otx2	ENSMUST00000113001.2|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3 	ENSMUST00000113002.2|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3
mm10_v2_chr8_-_69184177_69184240	0.249942	Pitx2_Otx2	ENSMUST00000185176.1|Lzts1|ENSMUSG00000036306.5|leucine zipper, putative tumor suppressor 1
mm10_v2_chrX_+_7697131_7697187	0.249645	Pitx2_Otx2	ENSMUST00000049896.6|Gpkow|ENSMUSG00000031148.8|G patch domain and KOW motifs
mm10_v2_chr9_+_107975529_107975601	0.246883	Pitx2_Otx2	ENSMUST00000035216.4|Uba7|ENSMUSG00000032596.8|ubiquitin-like modifier activating enzyme 7
mm10_v2_chr11_-_84828953_84828966	0.24627	Pitx2_Otx2	ENSMUST00000047560.7|Dhrs11|ENSMUSG00000034449.7|dehydrogenase/reductase (SDR family) member 11
mm10_v2_chr2_+_104590453_104590533	0.244247	Pitx2_Otx2	ENSMUST00000028599.7|Cstf3|ENSMUSG00000027176.8|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm10_v2_chr2_+_101886249_101886269	0.243815	Pitx2_Otx2	ENSMUST00000028584.7|Commd9|ENSMUSG00000027163.7|COMM domain containing 9
mm10_v2_chr8_+_126422478_126422514	0.24173	Pitx2_Otx2	ENSMUST00000059093.5|Coa6|ENSMUSG00000051671.6|cytochrome c oxidase assembly factor 6
mm10_v2_chr7_+_17203469_17203485	0.240069	Pitx2_Otx2	ENSMUST00000075934.5|Psg29|ENSMUSG00000023159.7|pregnancy-specific glycoprotein 29
mm10_v2_chr1_-_126738167_126738230	0.239904	Pitx2_Otx2	ENSMUST00000160693.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr5_-_125389915_125390055	0.237357	Pitx2_Otx2	ENSMUST00000136312.1|Ubc|ENSMUSG00000008348.9|ubiquitin C
mm10_v2_chr10_+_43221466_43221501	0.237167	Pitx2_Otx2	ENSMUST00000095725.4|Pdss2|ENSMUSG00000038240.7|prenyl (solanesyl) diphosphate synthase, subunit 2
mm10_v2_chr6_+_137735078_137735151	0.234791	Pitx2_Otx2	ENSMUST00000064910.6|Strap|ENSMUSG00000030224.10|serine/threonine kinase receptor associated protein
mm10_v2_chr7_+_28440927_28440945	0.231573	Pitx2_Otx2	ENSMUST00000078845.6|Gmfg|ENSMUSG00000060791.9|glia maturation factor, gamma
mm10_v2_chr9_-_22130598_22130640	0.2296	Pitx2_Otx2	ENSMUST00000115315.2|Acp5|ENSMUSG00000001348.8|acid phosphatase 5, tartrate resistant
mm10_v2_chr15_+_100038635_100038669	0.229577	Pitx2_Otx2	ENSMUST00000100203.3|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr5_+_130029277_130029340	0.225713	Pitx2_Otx2	ENSMUST00000026608.7|Crcp|ENSMUSG00000025532.10|calcitonin gene-related peptide-receptor component protein
mm10_v2_chr19_+_60889749_60889749	0.224335	Pitx2_Otx2	ENSMUST00000003313.8|Grk5|ENSMUSG00000003228.8|G protein-coupled receptor kinase 5
mm10_v2_chr7_+_140763739_140763828	0.220582	Pitx2_Otx2	ENSMUST00000026552.7|Cyp2e1|ENSMUSG00000025479.8|cytochrome P450, family 2, subfamily e, polypeptide 1
mm10_v2_chr3_-_95855753_95855822	0.220199	Pitx2_Otx2	ENSMUST00000161476.1|Prpf3|ENSMUSG00000015748.7|PRP3 pre-mRNA processing factor 3 homolog (yeast)
mm10_v2_chr3_+_79884576_79884597	0.216447	Pitx2_Otx2	ENSMUST00000145992.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr5_-_137611429_137611487	0.215567	Pitx2_Otx2	ENSMUST00000031731.7|Pcolce|ENSMUSG00000029718.8|procollagen C-endopeptidase enhancer protein
mm10_v2_chr12_+_4843303_4843419	0.215222	Pitx2_Otx2	ENSMUST00000053034.4|BC068281|ENSMUSG00000051721.4|cDNA sequence BC068281
mm10_v2_chr1_+_34849950_34850010	0.212667	Pitx2_Otx2	ENSMUST00000027297.4|Plekhb2|ENSMUSG00000026123.5|pleckstrin homology domain containing, family B (evectins) member 2
mm10_v2_chr6_-_88874045_88874070	0.211748	Pitx2_Otx2	ENSMUST00000038409.5|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr5_+_124483128_124483158	0.204613	Pitx2_Otx2	ENSMUST00000031349.8|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr17_+_25951472_25951472	0.202451	Pitx2_Otx2	ENSMUST00000181174.1|D630044L22Rik|ENSMUSG00000097405.1|RIKEN cDNA gene D630044L22 gene
mm10_v2_chr10_+_128225830_128225845	0.200421	Pitx2_Otx2	ENSMUST00000026455.7|Mip|ENSMUSG00000025389.7|major intrinsic protein of eye lens fiber
mm10_v2_chr18_-_38250157_38250212	0.200418	Pitx2_Otx2	ENSMUST00000181871.1|1700086O06Rik|ENSMUSG00000097080.1|RIKEN cDNA 1700086O06 gene
mm10_v2_chr19_-_29648355_29648425	0.199773	Pitx2_Otx2	ENSMUST00000159692.1|Ermp1|ENSMUSG00000046324.6|endoplasmic reticulum metallopeptidase 1
mm10_v2_chr10_+_58394361_58394380	0.199296	Pitx2_Otx2	ENSMUST00000020077.4|Lims1|ENSMUSG00000019920.11|LIM and senescent cell antigen-like domains 1
mm10_v2_chr1_+_132477361_132477412	0.198371	Pitx2_Otx2	ENSMUST00000027700.8|Rbbp5|ENSMUSG00000026439.8|retinoblastoma binding protein 5
mm10_v2_chr9_-_114496537_114496551	0.1954	Pitx2_Otx2	ENSMUST00000054414.3|Ccr4|ENSMUSG00000047898.6|chemokine (C-C motif) receptor 4
mm10_v2_chr5_+_139380581_139380707	0.192233	Pitx2_Otx2	ENSMUST00000051293.7|Gpr146|ENSMUSG00000044197.7|G protein-coupled receptor 146
mm10_v2_chr8_+_117498272_117498291	0.190642	Pitx2_Otx2	ENSMUST00000081232.7|Plcg2|ENSMUSG00000034330.9|phospholipase C, gamma 2
mm10_v2_chr6_-_72362382_72362432	0.187104	Pitx2_Otx2	ENSMUST00000114095.1|Rnf181|ENSMUSG00000055850.6|ring finger protein 181 	ENSMUST00000069595.6|Rnf181|ENSMUSG00000055850.6|ring finger protein 181 	ENSMUST00000069580.5|Rnf181|ENSMUSG00000055850.6|ring finger protein 181
mm10_v2_chr4_-_132922487_132922544	0.183711	Pitx2_Otx2	ENSMUST00000097856.3|Fam76a|ENSMUSG00000028878.5|family with sequence similarity 76, member A
mm10_v2_chr10_+_81384457_81384507	0.181744	Pitx2_Otx2	ENSMUST00000142346.1|Dohh|ENSMUSG00000078440.3|deoxyhypusine hydroxylase/monooxygenase
mm10_v2_chr11_+_78536355_78536368	0.181294	Pitx2_Otx2	ENSMUST00000128788.1|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20
mm10_v2_chr14_-_79868398_79868398	0.181231	Pitx2_Otx2	ENSMUST00000179430.1|Gm10845|ENSMUSG00000095959.1|predicted gene 10845
mm10_v2_chr9_+_20888175_20888239	0.180732	Pitx2_Otx2	ENSMUST00000004203.5|Ppan|ENSMUSG00000004100.5|peter pan homolog (Drosophila)
mm10_v2_chr17_-_32189457_32189549	0.179819	Pitx2_Otx2	ENSMUST00000087721.3|Ephx3|ENSMUSG00000037577.6|epoxide hydrolase 3 	ENSMUST00000162117.1|Ephx3|ENSMUSG00000037577.6|epoxide hydrolase 3
mm10_v2_chr7_-_16221993_16222050	0.178348	Pitx2_Otx2	ENSMUST00000118795.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000119102.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000094816.2|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000163968.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000121123.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm10_v2_chr8_+_58912257_58912257	0.177058	Pitx2_Otx2	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr11_-_6626030_6626072	0.176091	Pitx2_Otx2	ENSMUST00000000394.7|Tbrg4|ENSMUSG00000000384.9|transforming growth factor beta regulated gene 4 	ENSMUST00000136682.1|Tbrg4|ENSMUSG00000000384.9|transforming growth factor beta regulated gene 4
mm10_v2_chr7_-_127122226_127122226	0.17416	Pitx2_Otx2	ENSMUST00000032912.5|Qprt|ENSMUSG00000030674.5|quinolinate phosphoribosyltransferase
mm10_v2_chr4_-_120924950_120925032	0.168561	Pitx2_Otx2	ENSMUST00000030375.2|Exo5|ENSMUSG00000028629.3|exonuclease 5 	ENSMUST00000177880.1|Exo5|ENSMUSG00000028629.3|exonuclease 5 	ENSMUST00000156836.1|Exo5|ENSMUSG00000028629.3|exonuclease 5
mm10_v2_chr11_+_17257558_17257688	0.168042	Pitx2_Otx2	ENSMUST00000000594.2|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor 	ENSMUST00000156784.1|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor
mm10_v2_chr11_-_54956047_54956122	0.167237	Pitx2_Otx2	ENSMUST00000155316.1|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1 	ENSMUST00000108889.3|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1 	ENSMUST00000126703.1|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1
mm10_v2_chr9_+_22454290_22454290	0.163513	Pitx2_Otx2	ENSMUST00000168332.1|Gm17545|ENSMUSG00000091159.1|predicted gene, 17545
mm10_v2_chr8_+_71951038_71951130	0.162569	Pitx2_Otx2	ENSMUST00000131237.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000136516.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000109997.2|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000132848.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961
mm10_v2_chr6_+_113623959_113624037	0.15947	Pitx2_Otx2	ENSMUST00000035673.7|Vhl|ENSMUSG00000033933.7|von Hippel-Lindau tumor suppressor
mm10_v2_chr3_-_108445143_108445178	0.158636	Pitx2_Otx2	ENSMUST00000132467.1|Sars|ENSMUSG00000068739.7|seryl-aminoacyl-tRNA synthetase 	ENSMUST00000102625.4|Sars|ENSMUSG00000068739.7|seryl-aminoacyl-tRNA synthetase
mm10_v2_chr11_+_120673018_120673083	0.158379	Pitx2_Otx2	ENSMUST00000106158.2|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000103016.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000168714.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm10_v2_chr7_-_28962265_28962340	0.157556	Pitx2_Otx2	ENSMUST00000068045.7|Actn4|ENSMUSG00000054808.7|actinin alpha 4
mm10_v2_chr6_+_122707489_122707608	0.157471	Pitx2_Otx2	ENSMUST00000112581.1|Nanog|ENSMUSG00000012396.6|Nanog homeobox 	ENSMUST00000112580.1|Nanog|ENSMUSG00000012396.6|Nanog homeobox 	ENSMUST00000012540.4|Nanog|ENSMUSG00000012396.6|Nanog homeobox
mm10_v2_chr1_-_74305607_74305622	0.157011	Pitx2_Otx2	ENSMUST00000130763.1|Tmbim1|ENSMUSG00000006301.11|transmembrane BAX inhibitor motif containing 1
mm10_v2_chr2_-_35461365_35461449	0.156615	Pitx2_Otx2	ENSMUST00000102794.1|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3
mm10_v2_chrX_-_94212685_94212709	0.155943	Pitx2_Otx2	ENSMUST00000050328.8|Eif2s3x|ENSMUSG00000035150.9|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm10_v2_chr18_-_36766198_36766237	0.154058	Pitx2_Otx2	ENSMUST00000061522.7|Dnd1|ENSMUSG00000044595.10|dead end homolog 1 (zebrafish)
mm10_v2_chr3_-_108445183_108445211	0.151678	Pitx2_Otx2	ENSMUST00000090553.5|Sars|ENSMUSG00000068739.7|seryl-aminoacyl-tRNA synthetase 	ENSMUST00000153499.1|Sars|ENSMUSG00000068739.7|seryl-aminoacyl-tRNA synthetase
mm10_v2_chr1_-_185329331_185329401	0.150062	Pitx2_Otx2	ENSMUST00000027921.4|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110975.1|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110974.3|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial
mm10_v2_chr2_+_80638798_80638834	0.147425	Pitx2_Otx2	ENSMUST00000028382.6|Nup35|ENSMUSG00000026999.8|nucleoporin 35 	ENSMUST00000124377.1|Nup35|ENSMUSG00000026999.8|nucleoporin 35
mm10_v2_chr9_-_51102062_51102085	0.146057	Pitx2_Otx2	ENSMUST00000170947.1|4833427G06Rik|ENSMUSG00000032057.8|RIKEN cDNA 4833427G06 gene
mm10_v2_chr5_+_24393640_24393676	0.14504	Pitx2_Otx2	ENSMUST00000138168.1|Abcb8|ENSMUSG00000028973.12|ATP-binding cassette, sub-family B (MDR/TAP), member 8 	ENSMUST00000115077.1|Abcb8|ENSMUSG00000028973.12|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm10_v2_chr2_-_156180135_156180238	0.143214	Pitx2_Otx2	ENSMUST00000126992.1|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39 	ENSMUST00000146288.1|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39 	ENSMUST00000029149.6|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39 	ENSMUST00000109587.2|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39 	ENSMUST00000109584.1|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39
mm10_v2_chr3_+_83055516_83055565	0.140872	Pitx2_Otx2	ENSMUST00000150268.1|Plrg1|ENSMUSG00000027998.5|pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 	ENSMUST00000122128.1|Plrg1|ENSMUSG00000027998.5|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm10_v2_chr11_+_23665615_23665697	0.140797	Pitx2_Otx2	ENSMUST00000109525.1|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10 	ENSMUST00000020520.4|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10
mm10_v2_chr13_-_38658991_38659038	0.137034	Pitx2_Otx2	ENSMUST00000001757.7|Eef1e1|ENSMUSG00000001707.7|eukaryotic translation elongation factor 1 epsilon 1
mm10_v2_chr8_-_11635745_11635765	0.132045	Pitx2_Otx2	ENSMUST00000033905.5|Ankrd10|ENSMUSG00000031508.7|ankyrin repeat domain 10 	ENSMUST00000169782.1|Ankrd10|ENSMUSG00000031508.7|ankyrin repeat domain 10
mm10_v2_chr4_+_41755210_41755267	0.130451	Pitx2_Otx2	ENSMUST00000108038.1|Galt|ENSMUSG00000036073.11|galactose-1-phosphate uridyl transferase 	ENSMUST00000084695.4|Galt|ENSMUSG00000036073.11|galactose-1-phosphate uridyl transferase
mm10_v2_chr5_+_124483165_124483202	0.126123	Pitx2_Otx2	ENSMUST00000136567.1|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr3_+_41555723_41555745	0.125716	Pitx2_Otx2	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr7_-_27228605_27228636	0.125685	Pitx2_Otx2	ENSMUST00000003850.7|Itpkc|ENSMUSG00000003752.8|inositol 1,4,5-trisphosphate 3-kinase C
mm10_v2_chr3_+_79884496_79884571	0.124921	Pitx2_Otx2	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr9_-_50617428_50617467	0.124665	Pitx2_Otx2	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr9_-_98601642_98601679	0.121743	Pitx2_Otx2	ENSMUST00000035034.8|Mrps22|ENSMUSG00000032459.8|mitochondrial ribosomal protein S22
mm10_v2_chr10_-_86011833_86011896	0.120788	Pitx2_Otx2	ENSMUST00000105304.1|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C 	ENSMUST00000061699.5|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C
mm10_v2_chr19_-_6128208_6128304	0.119882	Pitx2_Otx2	ENSMUST00000025702.7|Snx15|ENSMUSG00000024787.7|sorting nexin 15
mm10_v2_chr4_+_130107556_130107606	0.119174	Pitx2_Otx2	ENSMUST00000030563.5|Pef1|ENSMUSG00000028779.10|penta-EF hand domain containing 1
mm10_v2_chr2_+_181319714_181319785	0.116065	Pitx2_Otx2	ENSMUST00000098971.4|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1 	ENSMUST00000054622.8|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1 	ENSMUST00000108814.1|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1 	ENSMUST00000048608.9|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1 	ENSMUST00000108815.1|Rtel1|ENSMUSG00000038685.12|regulator of telomere elongation helicase 1
mm10_v2_chr8_-_84270347_84270405	0.115063	Pitx2_Otx2	ENSMUST00000005120.5|Ccdc130|ENSMUSG00000004994.6|coiled-coil domain containing 130 	ENSMUST00000163993.1|Ccdc130|ENSMUSG00000004994.6|coiled-coil domain containing 130 	ENSMUST00000098578.3|Ccdc130|ENSMUSG00000004994.6|coiled-coil domain containing 130
mm10_v2_chr18_-_35627223_35627249	0.113177	Pitx2_Otx2	ENSMUST00000025212.5|Slc23a1|ENSMUSG00000024354.5|solute carrier family 23 (nucleobase transporters), member 1
mm10_v2_chr5_-_36748639_36748694	0.110384	Pitx2_Otx2	ENSMUST00000071949.3|Bloc1s4|ENSMUSG00000060708.3|biogenesis of organelles complex-1, subunit 4, cappuccino
mm10_v2_chr4_+_95579463_95579499	0.110077	Pitx2_Otx2	ENSMUST00000150830.1|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing 	ENSMUST00000134012.2|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing
mm10_v2_chr11_-_106388066_106388105	0.110041	Pitx2_Otx2	ENSMUST00000106813.2|Icam2|ENSMUSG00000001029.9|intercellular adhesion molecule 2 	ENSMUST00000141146.1|Icam2|ENSMUSG00000001029.9|intercellular adhesion molecule 2
mm10_v2_chr1_+_118321834_118321882	0.110031	Pitx2_Otx2	ENSMUST00000027626.6|Mki67ip|ENSMUSG00000026377.6|Mki67 (FHA domain) interacting nucleolar phosphoprotein 	ENSMUST00000112688.3|Mki67ip|ENSMUSG00000026377.6|Mki67 (FHA domain) interacting nucleolar phosphoprotein
mm10_v2_chr8_+_109565892_109566031	0.106945	Pitx2_Otx2	ENSMUST00000034159.1|Txnl4b|ENSMUSG00000031723.2|thioredoxin-like 4B
mm10_v2_chr11_-_120348091_120348189	0.105777	Pitx2_Otx2	ENSMUST00000106215.4|Actg1|ENSMUSG00000062825.9|actin, gamma, cytoplasmic 1
mm10_v2_chr5_-_134176720_134176784	0.105004	Pitx2_Otx2	ENSMUST00000076228.2|Wbscr16|ENSMUSG00000061979.2|Williams-Beuren syndrome chromosome region 16 homolog (human)
mm10_v2_chr7_+_97720839_97720839	0.104655	Pitx2_Otx2	ENSMUST00000070021.1|Gm9990|ENSMUSG00000056106.1|predicted gene 9990
mm10_v2_chr8_-_58911627_58911627	0.103261	Pitx2_Otx2	ENSMUST00000077447.4|Galntl6|ENSMUSG00000061864.6|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm10_v2_chr17_+_71616215_71616259	0.101447	Pitx2_Otx2	ENSMUST00000047086.9|Wdr43|ENSMUSG00000041057.9|WD repeat domain 43
mm10_v2_chr2_-_26910569_26910677	0.100831	Pitx2_Otx2	ENSMUST00000015920.5|Med22|ENSMUSG00000015776.6|mediator complex subunit 22 	ENSMUST00000139815.1|Med22|ENSMUSG00000015776.6|mediator complex subunit 22 	ENSMUST00000102899.3|Med22|ENSMUSG00000015776.6|mediator complex subunit 22
mm10_v2_chr2_-_157571270_157571289	0.100805	Pitx2_Otx2	ENSMUST00000173378.1|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr7_-_19692596_19692658	0.099388	Pitx2_Otx2	ENSMUST00000108451.2|Apoc1|ENSMUSG00000040564.7|apolipoprotein C-I 	ENSMUST00000045035.4|Apoc1|ENSMUSG00000040564.7|apolipoprotein C-I
mm10_v2_chrX_+_36112110_36112172	0.0991205	Pitx2_Otx2	ENSMUST00000033418.7|Il13ra1|ENSMUSG00000017057.9|interleukin 13 receptor, alpha 1
mm10_v2_chr11_+_51763682_51763749	0.0987903	Pitx2_Otx2	ENSMUST00000020653.5|Sar1b|ENSMUSG00000020386.5|SAR1 gene homolog B (S. cerevisiae)
mm10_v2_chr16_-_56037728_56037819	0.0968715	Pitx2_Otx2	ENSMUST00000059052.8|Trmt10c|ENSMUSG00000044763.8|tRNA methyltransferase 10C
mm10_v2_chr11_-_50431101_50431131	0.0958571	Pitx2_Otx2	ENSMUST00000020643.3|Rufy1|ENSMUSG00000020375.3|RUN and FYVE domain containing 1
mm10_v2_chr2_+_131210501_131210604	0.0939613	Pitx2_Otx2	ENSMUST00000110206.1|Ap5s1|ENSMUSG00000068264.5|adaptor-related protein 5 complex, sigma 1 subunit
mm10_v2_chr9_+_102718424_102718490	0.0900748	Pitx2_Otx2	ENSMUST00000156485.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2 	ENSMUST00000145937.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2 	ENSMUST00000134483.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2
mm10_v2_chr7_-_7209998_7209998	0.0872239	Pitx2_Otx2	ENSMUST00000074455.7|Zfp772|ENSMUSG00000066838.6|zinc finger protein 772
mm10_v2_chr8_+_70083509_70083547	0.0836499	Pitx2_Otx2	ENSMUST00000007738.9|Hapln4|ENSMUSG00000007594.9|hyaluronan and proteoglycan link protein 4
mm10_v2_chr5_+_67260794_67260814	0.0824636	Pitx2_Otx2	ENSMUST00000161369.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33
mm10_v2_chr17_-_32886083_32886083	0.0808854	Pitx2_Otx2	ENSMUST00000178401.1|Zfp870|ENSMUSG00000095325.1|zinc finger protein 870
mm10_v2_chr8_+_13435459_13435503	0.0788311	Pitx2_Otx2	ENSMUST00000167071.1|Tmem255b|ENSMUSG00000038457.10|transmembrane protein 255B 	ENSMUST00000167505.1|Tmem255b|ENSMUSG00000038457.10|transmembrane protein 255B
mm10_v2_chr5_+_67941669_67941669	0.0753026	Pitx2_Otx2	ENSMUST00000177891.1|Gm5108|ENSMUSG00000094719.1|predicted gene 5108
mm10_v2_chr11_-_77787747_77787747	0.0749674	Pitx2_Otx2	ENSMUST00000092883.2|Gm10277|ENSMUSG00000069804.2|predicted gene 10277
mm10_v2_chr1_+_164275559_164275660	0.0732786	Pitx2_Otx2	ENSMUST00000027867.6|Ccdc181|ENSMUSG00000026578.6|coiled-coil domain containing 181
mm10_v2_chr9_-_110101010_110101087	0.0683245	Pitx2_Otx2	ENSMUST00000062368.6|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr3_-_95855860_95855889	0.0623131	Pitx2_Otx2	ENSMUST00000015892.7|Prpf3|ENSMUSG00000015748.7|PRP3 pre-mRNA processing factor 3 homolog (yeast)
mm10_v2_chr19_-_43752924_43753001	0.0611742	Pitx2_Otx2	ENSMUST00000045562.5|Cox15|ENSMUSG00000040018.9|cytochrome c oxidase assembly protein 15
mm10_v2_chr11_+_9048575_9048630	0.0599657	Pitx2_Otx2	ENSMUST00000043285.4|Gm11992|ENSMUSG00000040978.4|predicted gene 11992
mm10_v2_chr11_+_6292555_6292605	0.0578681	Pitx2_Otx2	ENSMUST00000081894.4|Ogdh|ENSMUSG00000020456.11|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
mm10_v2_chr17_+_13760502_13760674	0.0574904	Pitx2_Otx2	ENSMUST00000139347.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000156591.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000170827.2|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000139666.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000137784.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000137708.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000150848.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
mm10_v2_chr11_+_102041509_102041531	0.0572741	Pitx2_Otx2	ENSMUST00000123895.1|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000017453.5|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000107163.2|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000107164.2|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G
mm10_v2_chr12_-_102423741_102423774	0.0569464	Pitx2_Otx2	ENSMUST00000110020.1|Lgmn|ENSMUSG00000021190.8|legumain
mm10_v2_chr2_-_106970391_106970407	0.0544905	Pitx2_Otx2	ENSMUST00000093883.3|Arl14ep|ENSMUSG00000027122.9|ADP-ribosylation factor-like 14 effector protein
mm10_v2_chr8_+_120488416_120488490	0.0478872	Pitx2_Otx2	ENSMUST00000034279.9|Gse1|ENSMUSG00000031822.12|genetic suppressor element 1
mm10_v2_chr8_-_109608623_109608673	0.0468925	Pitx2_Otx2	ENSMUST00000123605.1|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase 	ENSMUST00000143900.1|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase 	ENSMUST00000069058.8|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase 	ENSMUST00000128350.1|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase
mm10_v2_chr5_-_93206428_93206470	0.0467703	Pitx2_Otx2	ENSMUST00000144514.1|Ccni|ENSMUSG00000063015.6|cyclin I
mm10_v2_chr13_-_66852017_66852017	0.042239	Pitx2_Otx2	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chr13_-_69611421_69611446	0.0414604	Pitx2_Otx2	ENSMUST00000091514.5|Srd5a1|ENSMUSG00000021594.10|steroid 5 alpha-reductase 1
mm10_v2_chr4_-_6454262_6454330	0.0384446	Pitx2_Otx2	ENSMUST00000029910.5|Nsmaf|ENSMUSG00000028245.9|neutral sphingomyelinase (N-SMase) activation associated factor
mm10_v2_chr17_-_35121990_35122053	0.0334793	Pitx2_Otx2	ENSMUST00000173915.1|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide 	ENSMUST00000172765.2|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide
mm10_v2_chr16_+_4684070_4684137	0.0334377	Pitx2_Otx2	ENSMUST00000060067.5|Dnaja3|ENSMUSG00000004069.10|DnaJ (Hsp40) homolog, subfamily A, member 3 	ENSMUST00000115854.3|Dnaja3|ENSMUSG00000004069.10|DnaJ (Hsp40) homolog, subfamily A, member 3
mm10_v2_chr9_+_110419750_110419809	0.0317748	Pitx2_Otx2	ENSMUST00000035061.6|Ngp|ENSMUSG00000032484.6|neutrophilic granule protein
mm10_v2_chrX_+_74424632_74424671	0.0317485	Pitx2_Otx2	ENSMUST00000114129.2|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000132749.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma
mm10_v2_chr7_-_15627876_15627876	0.0309678	Pitx2_Otx2	ENSMUST00000086122.3|Obox3|ENSMUSG00000066772.6|oocyte specific homeobox 3 	ENSMUST00000174443.1|Obox3|ENSMUSG00000066772.6|oocyte specific homeobox 3
mm10_v2_chr2_+_30807826_30807999	0.028412	Pitx2_Otx2	ENSMUST00000041830.3|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1 	ENSMUST00000152374.1|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1
mm10_v2_chr2_+_129100995_129101066	0.0269542	Pitx2_Otx2	ENSMUST00000103205.4|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B 	ENSMUST00000028874.7|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B
mm10_v2_chr9_+_88839164_88839164	0.024109	Pitx2_Otx2	ENSMUST00000163255.2|Trim43c|ENSMUSG00000067399.4|tripartite motif-containing 43C
mm10_v2_chr5_-_114773488_114773517	0.0240598	Pitx2_Otx2	ENSMUST00000178440.1|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2 	ENSMUST00000043283.7|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2 	ENSMUST00000112185.2|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2
mm10_v2_chr6_-_73221625_73221664	0.0230464	Pitx2_Otx2	ENSMUST00000064948.6|Dnah6|ENSMUSG00000052861.7|dynein, axonemal, heavy chain 6 	ENSMUST00000114040.1|Dnah6|ENSMUSG00000052861.7|dynein, axonemal, heavy chain 6
mm10_v2_chr2_-_151744142_151744205	0.0221125	Pitx2_Otx2	ENSMUST00000109869.1|Psmf1|ENSMUSG00000032869.9|proteasome (prosome, macropain) inhibitor subunit 1
mm10_v2_chr4_-_43000451_43000507	0.0140382	Pitx2_Otx2	ENSMUST00000030164.7|Vcp|ENSMUSG00000028452.7|valosin containing protein
mm10_v2_chr4_+_155067016_155067064	0.0137345	Pitx2_Otx2	ENSMUST00000103180.3|Pex10|ENSMUSG00000029047.7|peroxisomal biogenesis factor 10
mm10_v2_chr4_-_116807532_116807573	0.0135805	Pitx2_Otx2	ENSMUST00000106455.1|Toe1|ENSMUSG00000028688.7|target of EGR1, member 1 (nuclear)
mm10_v2_chr6_+_29859686_29859710	0.0106911	Pitx2_Otx2	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr4_-_97183166_97183166	0.0074104	Pitx2_Otx2	ENSMUST00000086672.2|Gm10192|ENSMUSG00000066990.2|predicted gene 10192
mm10_v2_chr11_+_119393060_119393100	0.00499276	Pitx2_Otx2	ENSMUST00000131035.2|Rnf213|ENSMUSG00000070327.7|ring finger protein 213 	ENSMUST00000093902.5|Rnf213|ENSMUSG00000070327.7|ring finger protein 213
mm10_v2_chr7_-_134232125_134232146	0.0037777	Pitx2_Otx2	ENSMUST00000127524.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr15_+_39112868_39112915	0.00275316	Pitx2_Otx2	ENSMUST00000022909.8|Dcaf13|ENSMUSG00000022300.8|DDB1 and CUL4 associated factor 13
mm10_v2_chr16_+_17619503_17619517	0.00022487	Pitx2_Otx2	ENSMUST00000165092.1|Smpd4|ENSMUSG00000005899.6|sphingomyelin phosphodiesterase 4
