mm10_v2_chr2_+_20737306_20737321	48.2633	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr9_+_118478344_118478451	44.78	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000035020.8|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr9_+_118478182_118478212	40.6639	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000111763.1|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr5_+_139543889_139543904	39.0733	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr8_-_61902669_61902713	33.8279	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr14_-_118052235_118052253	33.0374	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000022725.2|Dct|ENSMUSG00000022129.3|dopachrome tautomerase
mm10_v2_chr14_-_48665098_48665246	25.1035	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000118578.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr4_-_97778042_97778071	23.176	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000146447.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chrX_-_60893430_60893440	22.6423	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000135107.2|Sox3|ENSMUSG00000045179.8|SRY-box containing gene 3
mm10_v2_chr2_+_25372315_25372368	22.0572	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000028329.6|Sapcd2|ENSMUSG00000026955.7|suppressor APC domain containing 2 	ENSMUST00000114293.2|Sapcd2|ENSMUSG00000026955.7|suppressor APC domain containing 2 	ENSMUST00000100323.2|Sapcd2|ENSMUSG00000026955.7|suppressor APC domain containing 2
mm10_v2_chr2_+_71528657_71528683	20.4185	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000126400.1|Dlx1|ENSMUSG00000041911.3|distal-less homeobox 1
mm10_v2_chr3_+_159839729_159839745	19.2354	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000068952.5|Wls|ENSMUSG00000028173.6|wntless homolog (Drosophila)
mm10_v2_chr3_-_88410295_88410351	17.119	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000056370.7|Pmf1|ENSMUSG00000028066.10|polyamine-modulated factor 1
mm10_v2_chr17_+_34592248_34592329	17.0201	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000038149.6|Pbx2|ENSMUSG00000034673.8|pre B cell leukemia homeobox 2
mm10_v2_chr2_-_168767136_168767201	16.9514	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000029061.5|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila) 	ENSMUST00000103074.1|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr7_-_49636847_49636851	16.7522	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr15_+_25773985_25774042	15.5759	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000125667.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr2_-_168767029_168767104	14.4079	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000075044.3|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr6_+_8948608_8948619	14.1932	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr2_-_72986716_72986716	13.7096	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr12_+_38780284_38780349	12.9766	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr3_+_55782500_55782521	12.7432	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr19_+_59458372_59458450	12.1438	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000062216.3|Emx2|ENSMUSG00000043969.4|empty spiracles homeobox 2
mm10_v2_chr4_-_110292719_110292732	11.8529	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000106601.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr6_-_147264124_147264167	11.6465	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000052296.6|Pthlh|ENSMUSG00000048776.6|parathyroid hormone-like peptide
mm10_v2_chr7_-_115824699_115824752	11.3585	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000169129.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr7_-_37773555_37773641	11.3041	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000176534.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr12_+_38783503_38783527	11.2935	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000159334.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr11_+_102604370_102604435	11.1282	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000057893.5|Fzd2|ENSMUSG00000050288.5|frizzled homolog 2 (Drosophila)
mm10_v2_chr8_+_45658666_45658728	10.6269	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000134675.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000139869.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000126067.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr7_-_37772868_37772891	10.4751	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr8_+_45658731_45658804	10.113	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000143820.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000132139.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr12_+_38780817_38780854	10.0417	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr3_-_86548268_86548290	9.539	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000077524.3|Mab21l2|ENSMUSG00000057777.3|mab-21-like 2 (C. elegans)
mm10_v2_chr3_-_79841729_79841729	9.47423	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000168038.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr10_-_45470201_45470260	9.44238	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chr5_-_62766153_62766246	9.26013	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr3_+_125404072_125404131	9.15651	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000173932.1|Ndst4|ENSMUSG00000027971.10|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm10_v2_chr1_-_190170671_190170744	9.07457	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr11_+_60537978_60538074	9.047	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr3_+_125404292_125404340	9.00741	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000144344.1|Ndst4|ENSMUSG00000027971.10|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm10_v2_chr17_-_35697971_35698001	8.96319	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000146472.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr2_-_18048784_18048822	8.6755	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr8_-_84662841_84662859	8.48221	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000060427.4|Ier2|ENSMUSG00000053560.4|immediate early response 2
mm10_v2_chr13_+_44121167_44121322	8.27081	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000163056.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083 	ENSMUST00000159595.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083
mm10_v2_chr16_-_26989974_26989974	8.17243	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chr4_-_58499398_58499409	7.95495	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000107570.1|Lpar1|ENSMUSG00000038668.8|lysophosphatidic acid receptor 1
mm10_v2_chr12_+_38783455_38783482	7.69665	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000161980.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160701.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr1_-_172027269_172027313	7.55614	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr9_+_119063429_119063467	7.08806	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chrM_+_7005_7022	7.07144	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr10_+_26772477_26772515	6.86179	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000039557.7|Arhgap18|ENSMUSG00000039031.9|Rho GTPase activating protein 18
mm10_v2_chr14_+_79515618_79515694	6.82747	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr13_-_78196373_78196440	6.8159	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000125176.2|Nr2f1|ENSMUSG00000069171.7|nuclear receptor subfamily 2, group F, member 1
mm10_v2_chr4_+_97777780_97777834	6.77017	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000107062.2|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000052018.5|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000107057.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr3_+_134236483_134236500	6.72188	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr12_+_38781093_38781129	6.66686	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr1_-_190170178_190170237	6.59185	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000177288.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr6_+_15196949_15197102	6.42642	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000151301.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000131414.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000140557.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115469.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr13_+_23575753_23575773	6.28216	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000105105.1|Hist1h3d|ENSMUSG00000062808.4|histone cluster 1, H3d
mm10_v2_chr9_+_96258697_96258711	6.01531	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000179416.1|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr2_-_28916412_28916440	5.91589	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000050776.2|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila) 	ENSMUST00000113849.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr4_-_24430838_24430890	5.91546	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000183964.1|RP23-35K5.2|ENSMUSG00000099150.1|RP23-35K5.2
mm10_v2_chr16_-_63864114_63864182	5.85227	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr7_-_116198487_116198561	5.81497	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000181981.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr2_+_38341068_38341092	5.71036	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000133661.1|Lhx2|ENSMUSG00000000247.5|LIM homeobox protein 2
mm10_v2_chr13_-_53473074_53473074	5.59834	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000021922.8|Msx2|ENSMUSG00000021469.8|msh homeobox 2
mm10_v2_chr7_-_73541738_73541758	5.53399	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chrX_+_9885622_9885622	5.4495	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000067529.2|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5 	ENSMUST00000086165.3|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5
mm10_v2_chr1_+_109983737_109983737	5.41886	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000172005.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr4_+_154960915_154960930	5.32155	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000049621.6|Hes5|ENSMUSG00000048001.7|hairy and enhancer of split 5 (Drosophila)
mm10_v2_chr7_+_144838590_144838614	5.14939	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000105898.1|Fgf3|ENSMUSG00000031074.8|fibroblast growth factor 3
mm10_v2_chr3_-_66296807_66296837	5.0678	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000029419.7|Veph1|ENSMUSG00000027831.9|ventricular zone expressed PH domain-containing 1
mm10_v2_chr7_+_29071597_29071613	5.04139	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000180926.1|Gm26604|ENSMUSG00000097079.1|predicted gene, 26604
mm10_v2_chrX_+_56454871_56454887	5.02561	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr2_+_52038005_52038020	4.98561	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000065927.5|Tnfaip6|ENSMUSG00000053475.5|tumor necrosis factor alpha induced protein 6
mm10_v2_chr3_-_154328634_154328663	4.96441	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000167744.1|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8
mm10_v2_chr13_-_102905740_102905814	4.75323	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr11_-_50292302_50292363	4.68813	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000059458.4|Maml1|ENSMUSG00000050567.10|mastermind like 1 (Drosophila)
mm10_v2_chr9_+_65890237_65890343	4.5929	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000045802.6|2810417H13Rik|ENSMUSG00000040204.6|RIKEN cDNA 2810417H13 gene
mm10_v2_chr5_+_138187485_138187521	4.5767	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000110934.2|Cnpy4|ENSMUSG00000036968.9|canopy 4 homolog (zebrafish)
mm10_v2_chr5_+_115235836_115235836	4.56627	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000081497.6|Pop5|ENSMUSG00000060152.8|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm10_v2_chr5_-_77115145_77115156	4.5486	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000081964.5|Hopx|ENSMUSG00000059325.8|HOP homeobox
mm10_v2_chr6_+_134929118_134929164	4.53482	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000185152.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184504.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chr2_-_116067391_116067444	4.53019	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr13_-_102906046_102906111	4.46832	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr7_-_66427469_66427517	4.46717	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000015278.7|Aldh1a3|ENSMUSG00000015134.8|aldehyde dehydrogenase family 1, subfamily A3
mm10_v2_chr13_-_97747373_97747384	4.42972	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr4_-_45532470_45532470	4.21507	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000147448.1|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr17_+_17402672_17402771	4.15124	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000115576.2|Lix1|ENSMUSG00000047786.12|limb expression 1 homolog (chicken)
mm10_v2_chr9_+_35423582_35423589	4.14402	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000154652.1|Cdon|ENSMUSG00000038119.8|cell adhesion molecule-related/down-regulated by oncogenes
mm10_v2_chr13_+_8202885_8202918	4.06514	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000139438.1|Adarb2|ENSMUSG00000052551.9|adenosine deaminase, RNA-specific, B2 	ENSMUST00000135574.1|Adarb2|ENSMUSG00000052551.9|adenosine deaminase, RNA-specific, B2
mm10_v2_chr7_-_37769624_37769677	4.00734	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000175941.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr4_+_8690399_8690470	3.99333	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000127476.1|Chd7|ENSMUSG00000041235.5|chromodomain helicase DNA binding protein 7
mm10_v2_chr19_-_59170978_59170978	3.98946	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000172821.2|Vax1|ENSMUSG00000006270.6|ventral anterior homeobox containing gene 1
mm10_v2_chr1_-_172027251_172027268	3.939	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000138714.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr14_+_73237891_73238007	3.93663	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000044405.6|Lpar6|ENSMUSG00000033446.6|lysophosphatidic acid receptor 6
mm10_v2_chr10_+_88091070_88091076	3.87309	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr10_+_73821857_73821883	3.86331	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr1_-_78968079_78968079	3.82611	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000049117.5|Gm5830|ENSMUSG00000072978.2|predicted pseudogene 5830
mm10_v2_chr7_+_114745685_114745766	3.81657	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000136645.1|Insc|ENSMUSG00000048782.9|inscuteable homolog (Drosophila) 	ENSMUST00000169913.1|Insc|ENSMUSG00000048782.9|inscuteable homolog (Drosophila)
mm10_v2_chr3_+_122419772_122419787	3.81451	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000029766.4|Bcar3|ENSMUSG00000028121.4|breast cancer anti-estrogen resistance 3
mm10_v2_chr2_+_116067213_116067250	3.67944	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000152412.1|G630016G05Rik|ENSMUSG00000086308.1|RIKEN cDNA G630016G05 gene
mm10_v2_chr2_-_28916668_28916668	3.66796	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000113847.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr7_-_5014645_5014697	3.66115	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000165320.1|Fiz1|ENSMUSG00000061374.7|Flt3 interacting zinc finger protein 1
mm10_v2_chr8_+_45627709_45627803	3.65097	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000134321.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000135336.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr6_+_7555053_7555096	3.64316	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000090679.2|Tac1|ENSMUSG00000061762.6|tachykinin 1 	ENSMUST00000184986.1|Tac1|ENSMUSG00000061762.6|tachykinin 1
mm10_v2_chr11_+_94327984_94328029	3.6241	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chrM_+_2743_2761	3.59103	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr3_+_76593550_76593550	3.52075	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr3_-_17786834_17786898	3.4913	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000099198.2|Gm10742|ENSMUSG00000074674.2|predicted gene 10742
mm10_v2_chr18_+_56432116_56432163	3.42124	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr15_+_55307743_55307762	3.35647	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000023053.5|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110221.2|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110217.3|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1
mm10_v2_chr3_-_157925056_157925077	3.34561	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000118539.1|Cth|ENSMUSG00000028179.11|cystathionase (cystathionine gamma-lyase)
mm10_v2_chr6_-_124779686_124779742	3.25382	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000147669.1|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000128697.1|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000032218.3|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000112475.2|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23
mm10_v2_chrX_-_102157065_102157096	3.24368	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000056904.2|Ercc6l|ENSMUSG00000051220.2|excision repair cross-complementing rodent repair deficiency complementation group 6 like
mm10_v2_chr2_+_181767040_181767073	3.20792	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000108756.1|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr2_+_181767283_181767322	3.1932	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000108757.2|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr3_+_66219909_66219927	3.132	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000029421.5|Ptx3|ENSMUSG00000027832.5|pentraxin related gene
mm10_v2_chr4_+_62583568_62583601	3.11232	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000098031.3|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3
mm10_v2_chr8_-_31918203_31918368	2.98547	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000073884.4|Nrg1|ENSMUSG00000062991.6|neuregulin 1
mm10_v2_chr18_-_80986578_80986578	2.96428	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000057950.7|Sall3|ENSMUSG00000024565.8|sal-like 3 (Drosophila)
mm10_v2_chr3_-_100489324_100489354	2.94694	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000061455.8|Fam46c|ENSMUSG00000044468.8|family with sequence similarity 46, member C
mm10_v2_chr1_-_163725123_163725232	2.9419	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000159679.1|Mettl11b|ENSMUSG00000040113.8|methyltransferase like 11B
mm10_v2_chr15_-_9140374_9140451	2.92642	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000096482.3|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45) 	ENSMUST00000110585.2|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45)
mm10_v2_chr10_+_37139558_37139558	2.88624	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chrX_-_74246534_74246556	2.84063	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000101454.2|Flna|ENSMUSG00000031328.9|filamin, alpha 	ENSMUST00000033699.6|Flna|ENSMUSG00000031328.9|filamin, alpha
mm10_v2_chr17_-_49564262_49564337	2.81186	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000057610.6|Daam2|ENSMUSG00000040260.7|dishevelled associated activator of morphogenesis 2
mm10_v2_chr18_+_4993795_4993819	2.80915	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000153016.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr5_+_135106881_135106918	2.80697	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000005507.3|Mlxipl|ENSMUSG00000005373.7|MLX interacting protein-like
mm10_v2_chr1_+_110099295_110099295	2.71392	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000134301.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr1_+_153665274_153665325	2.68596	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000152114.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8 	ENSMUST00000111812.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr5_+_34999046_34999069	2.67439	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000114281.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr5_-_138187177_138187237	2.63251	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000110937.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000139276.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000048698.7|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000123415.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr2_+_83724397_83724555	2.58927	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000028499.4|Itgav|ENSMUSG00000027087.5|integrin alpha V 	ENSMUST00000141725.1|Itgav|ENSMUSG00000027087.5|integrin alpha V 	ENSMUST00000111740.2|Itgav|ENSMUSG00000027087.5|integrin alpha V
mm10_v2_chr2_-_58052832_58052870	2.50937	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000090940.5|Ermn|ENSMUSG00000026830.9|ermin, ERM-like protein
mm10_v2_chr1_+_82233112_82233112	2.47947	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000023262.5|Gm9747|ENSMUSG00000022591.5|predicted gene 9747
mm10_v2_chr9_-_96437434_96437434	2.45815	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000070500.2|BC043934|ENSMUSG00000056418.2|cDNA sequence BC043934
mm10_v2_chr1_-_14310198_14310218	2.42238	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr11_-_3931960_3932159	2.41276	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000109990.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000020710.4|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109989.3|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109991.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109993.2|Tcn2|ENSMUSG00000020432.6|transcobalamin 2
mm10_v2_chr14_-_48667508_48667644	2.4066	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000144465.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000133479.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000119070.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000152018.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr2_-_79456750_79456761	2.38726	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr4_+_136143497_136143497	2.37756	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000008016.2|Id3|ENSMUSG00000007872.3|inhibitor of DNA binding 3
mm10_v2_chr1_+_153665666_153665709	2.36954	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000111814.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8 	ENSMUST00000111810.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr8_-_45382198_45382291	2.36422	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000093526.6|Fam149a|ENSMUSG00000070044.9|family with sequence similarity 149, member A
mm10_v2_chr19_-_15924560_15924622	2.3456	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000162053.1|Psat1|ENSMUSG00000024640.3|phosphoserine aminotransferase 1
mm10_v2_chr7_+_49910112_49910146	2.28436	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr9_+_72806874_72806874	2.24663	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr13_+_89540636_89540678	2.17248	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr7_+_125829653_125829668	2.1604	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000124223.1|D430042O09Rik|ENSMUSG00000032743.9|RIKEN cDNA D430042O09 gene
mm10_v2_chr17_+_45734506_45734630	2.155	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr5_+_15516489_15516489	2.14782	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000178227.1|Gm21847|ENSMUSG00000094230.1|predicted gene, 21847
mm10_v2_chr11_-_3931789_3931816	2.12689	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000109992.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109988.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2
mm10_v2_chr15_-_34495180_34495276	2.11383	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000022946.5|Hrsp12|ENSMUSG00000022323.5|heat-responsive protein 12
mm10_v2_chr1_+_104768510_104768529	2.10535	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000062528.8|Cdh20|ENSMUSG00000050840.8|cadherin 20
mm10_v2_chr10_-_80421847_80421876	2.1038	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000156244.1|Tcf3|ENSMUSG00000020167.8|transcription factor 3
mm10_v2_chr19_+_24875679_24875689	2.07048	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000073080.5|Gm10053|ENSMUSG00000058927.5|predicted gene 10053
mm10_v2_chr2_+_71389239_71389278	2.06892	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000028408.2|Hat1|ENSMUSG00000027018.5|histone aminotransferase 1
mm10_v2_chr11_+_98798653_98798664	2.03075	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000037930.6|Msl1|ENSMUSG00000052915.8|male-specific lethal 1 homolog (Drosophila)
mm10_v2_chr4_-_42168603_42168603	2.02194	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000098121.3|Gm13305|ENSMUSG00000073876.3|predicted gene 13305
mm10_v2_chr2_+_152754156_152754186	2.00545	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000010020.5|Cox4i2|ENSMUSG00000009876.7|cytochrome c oxidase subunit IV isoform 2
mm10_v2_chr1_+_10993452_10993478	1.98182	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000027056.5|Prex2|ENSMUSG00000048960.7|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
mm10_v2_chr14_+_54259227_54259241	1.9804	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000041197.7|Abhd4|ENSMUSG00000040997.7|abhydrolase domain containing 4
mm10_v2_chr1_+_132298606_132298631	1.90757	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr6_-_148946146_148946182	1.89536	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000132696.1|Fam60a|ENSMUSG00000039985.8|family with sequence similarity 60, member A
mm10_v2_chr12_+_52516077_52516077	1.82594	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr13_-_97747399_97747414	1.81272	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr16_+_33684538_33684554	1.80986	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000126532.1|Heg1|ENSMUSG00000075254.5|HEG homolog 1 (zebrafish)
mm10_v2_chr15_-_50890041_50890064	1.76728	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000077935.5|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr1_+_153665587_153665595	1.75605	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000147700.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr4_-_132510493_132510509	1.72814	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000030724.8|Sesn2|ENSMUSG00000028893.8|sestrin 2
mm10_v2_chr9_+_89199319_89199379	1.72638	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000138109.1|Mthfs|ENSMUSG00000066442.10|5, 10-methenyltetrahydrofolate synthetase
mm10_v2_chr1_+_153665627_153665657	1.71974	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000147482.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr3_+_121291725_121291817	1.6388	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000039442.7|Alg14|ENSMUSG00000039887.7|asparagine-linked glycosylation 14
mm10_v2_chr6_+_34709442_34709497	1.63533	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr3_-_116253467_116253484	1.59326	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000090473.5|Gpr88|ENSMUSG00000068696.5|G-protein coupled receptor 88
mm10_v2_chr7_+_28881656_28881718	1.57887	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000066880.4|Capn12|ENSMUSG00000054083.7|calpain 12
mm10_v2_chr11_+_114851507_114851553	1.55805	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000177952.1|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C
mm10_v2_chr5_+_34999070_34999086	1.5533	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000114280.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr12_+_3954943_3954957	1.54215	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000020990.5|Pomc|ENSMUSG00000020660.5|pro-opiomelanocortin-alpha
mm10_v2_chr12_-_111813834_111813858	1.52048	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000021715.5|Xrcc3|ENSMUSG00000021287.6|X-ray repair complementing defective repair in Chinese hamster cells 3
mm10_v2_chr17_-_48432723_48432741	1.51065	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000046549.3|Apobec2|ENSMUSG00000040694.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm10_v2_chr8_-_120228221_120228297	1.4782	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000183235.1|A330074K22Rik|ENSMUSG00000097960.1|RIKEN cDNA A330074K22 gene
mm10_v2_chr10_+_128747850_128747895	1.4628	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000163377.2|Wibg|ENSMUSG00000064030.8|within bgcn homolog (Drosophila)
mm10_v2_chr1_-_72284248_72284314	1.45893	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000097698.4|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase 	ENSMUST00000027381.6|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase
mm10_v2_chr11_-_31671863_31671885	1.45756	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000058060.7|Bod1|ENSMUSG00000044502.10|biorientation of chromosomes in cell division 1
mm10_v2_chr3_+_5218546_5218561	1.44925	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr13_+_23555023_23555039	1.44826	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000045301.6|Hist1h1d|ENSMUSG00000052565.5|histone cluster 1, H1d
mm10_v2_chr1_+_156035392_156035431	1.43979	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000111757.3|Tor1aip2|ENSMUSG00000050565.10|torsin A interacting protein 2
mm10_v2_chr13_-_81570640_81570671	1.41085	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000109565.2|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98
mm10_v2_chr18_+_4920509_4920586	1.40139	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000126977.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr5_-_87482258_87482283	1.37839	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000079811.6|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1 	ENSMUST00000144144.1|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1
mm10_v2_chr19_+_55895508_55895511	1.37085	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000111646.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr16_+_45094036_45094053	1.36666	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000061050.5|Ccdc80|ENSMUSG00000022665.8|coiled-coil domain containing 80
mm10_v2_chr14_-_46390501_46390550	1.34201	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000100676.2|Bmp4|ENSMUSG00000021835.8|bone morphogenetic protein 4
mm10_v2_chr14_-_12345847_12345872	1.33043	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000022262.4|Fezf2|ENSMUSG00000021743.5|Fez family zinc finger 2
mm10_v2_chr1_+_137928100_137928170	1.32335	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000054333.2|A130050O07Rik|ENSMUSG00000051480.2|RIKEN cDNA A130050O07 gene
mm10_v2_chr8_+_23411490_23411507	1.31609	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000033952.7|Sfrp1|ENSMUSG00000031548.7|secreted frizzled-related protein 1
mm10_v2_chr9_+_45138437_45138462	1.31603	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000060125.5|Scn4b|ENSMUSG00000046480.5|sodium channel, type IV, beta
mm10_v2_chrX_+_159303266_159303281	1.30939	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr12_-_57546121_57546141	1.29148	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr14_+_53324632_53324632	1.2831	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000178100.1|Trav7n-6|ENSMUSG00000095415.1|T cell receptor alpha variable 7N-6
mm10_v2_chr18_+_61639542_61639653	1.2586	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000183083.1|Gm20748|ENSMUSG00000098098.1|predicted gene, 20748 	ENSMUST00000183087.1|Gm20748|ENSMUSG00000098098.1|predicted gene, 20748
mm10_v2_chr15_+_34495302_34495347	1.23473	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000052290.7|Pop1|ENSMUSG00000022325.8|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) 	ENSMUST00000079028.5|Pop1|ENSMUSG00000022325.8|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
mm10_v2_chr10_-_53647080_53647080	1.21671	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr13_-_114458720_114458736	1.20452	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000022287.5|Fst|ENSMUSG00000021765.7|follistatin
mm10_v2_chr5_+_63812447_63812538	1.16656	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000081747.3|0610040J01Rik|ENSMUSG00000060512.3|RIKEN cDNA 0610040J01 gene
mm10_v2_chr2_-_30093642_30093679	1.15235	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000102865.4|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr7_+_101896340_101896431	1.05904	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000035395.7|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000106973.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000144207.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr3_+_76075583_76075583	1.05709	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chrX_+_140956892_140956923	1.05459	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000112971.1|Atg4a|ENSMUSG00000079418.3|autophagy related 4A, cysteine peptidase
mm10_v2_chr18_-_56975333_56975376	1.04095	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chr18_+_34758890_34758906	1.0202	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000049281.5|Fam53c|ENSMUSG00000034300.10|family with sequence similarity 53, member C
mm10_v2_chrX_-_134111852_134111873	0.985137	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000033610.6|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr5_+_34999111_34999184	0.963298	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000114283.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr4_-_82850721_82850814	0.95111	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000139401.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr1_-_156034800_156034817	0.94972	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr9_-_13818665_13818689	0.945848	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000150893.1|Cep57|ENSMUSG00000031922.6|centrosomal protein 57 	ENSMUST00000124883.1|Cep57|ENSMUSG00000031922.6|centrosomal protein 57
mm10_v2_chr11_-_102946688_102946725	0.944142	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000057849.5|C1ql1|ENSMUSG00000045532.5|complement component 1, q subcomponent-like 1
mm10_v2_chrX_-_150589844_150589861	0.914483	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000112725.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112720.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2
mm10_v2_chr3_+_133338936_133339109	0.914283	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000150386.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2 	ENSMUST00000125858.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2
mm10_v2_chrM_+_9870_9885	0.899443	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chrM_+_9452_9468	0.889167	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm10_v2_chr14_-_46390576_46390669	0.887011	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000074077.5|Bmp4|ENSMUSG00000021835.8|bone morphogenetic protein 4
mm10_v2_chr15_-_102350692_102350771	0.884259	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000041208.7|Aaas|ENSMUSG00000036678.7|achalasia, adrenocortical insufficiency, alacrimia
mm10_v2_chr8_-_26119125_26119233	0.855145	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000037182.7|Hook3|ENSMUSG00000037234.10|hook homolog 3 (Drosophila)
mm10_v2_chr15_-_50890396_50890463	0.828321	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000185183.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr2_+_174327747_174327768	0.824607	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000087871.4|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr17_-_31636631_31636790	0.821139	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000135425.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase 	ENSMUST00000151718.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase 	ENSMUST00000155814.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase
mm10_v2_chr3_+_5218516_5218544	0.812665	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr4_-_154636831_154636873	0.809491	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000030902.6|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105637.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000070313.7|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105636.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105638.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000097759.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000124771.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16
mm10_v2_chr17_+_34039437_34039481	0.791393	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000131134.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000087497.4|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114255.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114252.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2
mm10_v2_chr2_+_125068118_125068133	0.76094	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000070353.3|Slc24a5|ENSMUSG00000035183.8|solute carrier family 24, member 5
mm10_v2_chr2_+_9882622_9882646	0.760664	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000114919.1|4930412O13Rik|ENSMUSG00000025783.2|RIKEN cDNA 4930412O13 gene
mm10_v2_chrX_+_150589907_150589996	0.75013	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000080884.4|Pfkfb1|ENSMUSG00000025271.7|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm10_v2_chr6_-_148831448_148831494	0.747432	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000048418.7|Ipo8|ENSMUSG00000040029.8|importin 8
mm10_v2_chr2_+_23069210_23069327	0.740867	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000155602.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr13_-_58354862_58354862	0.728046	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr3_+_32515295_32515295	0.713834	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000029203.7|Zfp639|ENSMUSG00000027667.8|zinc finger protein 639
mm10_v2_chr2_+_132847719_132847743	0.709938	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000124836.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1 	ENSMUST00000154160.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1
mm10_v2_chr6_-_57535422_57535447	0.692154	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000042766.3|Ppm1k|ENSMUSG00000037826.3|protein phosphatase 1K (PP2C domain containing)
mm10_v2_chr1_-_156034826_156034880	0.689265	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000141878.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1 	ENSMUST00000123705.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr14_+_54894573_54894627	0.688283	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000141446.1|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1 	ENSMUST00000139985.1|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1 	ENSMUST00000172557.1|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1
mm10_v2_chr13_+_23746734_23746763	0.687494	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000099703.2|Hist1h2bb|ENSMUSG00000075031.2|histone cluster 1, H2bb
mm10_v2_chr13_-_36117269_36117357	0.679962	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000053265.6|Lyrm4|ENSMUSG00000046573.6|LYR motif containing 4
mm10_v2_chr2_-_30093607_30093641	0.670839	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000081838.6|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr10_+_128337761_128337832	0.669172	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000005826.7|Cs|ENSMUSG00000005683.7|citrate synthase
mm10_v2_chr10_+_128083273_128083309	0.668272	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000026459.5|Atp5b|ENSMUSG00000025393.6|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm10_v2_chr7_+_131542867_131542867	0.665107	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000046093.5|Hmx3|ENSMUSG00000040148.5|H6 homeobox 3
mm10_v2_chr4_+_116720920_116721004	0.663951	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000045542.6|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2 	ENSMUST00000106459.1|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2
mm10_v2_chrM_+_11734_11757	0.633066	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr9_-_71163224_71163293	0.627664	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000074465.2|Aqp9|ENSMUSG00000032204.7|aquaporin 9
mm10_v2_chr2_-_174346712_174346712	0.623047	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000168292.1|Gm20721|ENSMUSG00000090625.1|predicted gene, 20721
mm10_v2_chr16_+_19760232_19760247	0.607477	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000079780.3|B3gnt5|ENSMUSG00000022686.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 	ENSMUST00000164397.1|B3gnt5|ENSMUSG00000022686.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm10_v2_chrX_-_74246364_74246438	0.606091	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000130007.1|Flna|ENSMUSG00000031328.9|filamin, alpha
mm10_v2_chr5_-_138170992_138171033	0.600879	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000139983.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr7_+_123123870_123123901	0.593932	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr18_-_54990124_54990180	0.588684	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000064763.5|Zfp608|ENSMUSG00000052713.8|zinc finger protein 608
mm10_v2_chr1_-_13372434_13372457	0.586327	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr3_+_5218589_5218614	0.55531	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr5_-_138171248_138171274	0.530859	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000153867.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr2_-_84425258_84425411	0.524262	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000074262.2|Calcrl|ENSMUSG00000059588.7|calcitonin receptor-like
mm10_v2_chr12_+_71170589_71170589	0.523666	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000129376.1|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene
mm10_v2_chr2_+_106693185_106693278	0.522169	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr11_+_101582236_101582312	0.515049	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000039581.7|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000100403.2|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000107194.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000128614.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A
mm10_v2_chr7_+_35802593_35802593	0.500498	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000052454.2|E130304I02Rik|ENSMUSG00000044997.2|RIKEN cDNA E130304I02 gene
mm10_v2_chr16_+_19760195_19760227	0.493975	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000121344.1|B3gnt5|ENSMUSG00000022686.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm10_v2_chr1_-_24612700_24612700	0.466556	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
mm10_v2_chr1_+_74284930_74285072	0.449445	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000113805.1|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000027370.6|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000087226.4|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia
mm10_v2_chr13_+_8202922_8202935	0.442813	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000123187.1|Adarb2|ENSMUSG00000052551.9|adenosine deaminase, RNA-specific, B2
mm10_v2_chr2_+_84734050_84734107	0.440175	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000090729.2|Ypel4|ENSMUSG00000034059.7|yippee-like 4 (Drosophila)
mm10_v2_chr6_+_79818031_79818031	0.435231	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000179797.1|Gm20594|ENSMUSG00000096887.1|predicted gene, 20594
mm10_v2_chr13_+_36117349_36117411	0.421935	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000021857.5|Fars2|ENSMUSG00000021420.6|phenylalanine-tRNA synthetase 2 (mitochondrial) 	ENSMUST00000099582.2|Fars2|ENSMUSG00000021420.6|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr19_+_56548254_56548283	0.420663	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000071423.5|Nhlrc2|ENSMUSG00000025078.8|NHL repeat containing 2
mm10_v2_chr6_+_29859374_29859381	0.418821	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000115238.3|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr3_+_90600203_90600219	0.399101	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000001047.7|S100a3|ENSMUSG00000001021.8|S100 calcium binding protein A3
mm10_v2_chr7_-_45830776_45830944	0.391129	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000107723.2|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1 	ENSMUST00000131384.1|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1
mm10_v2_chr2_-_147186389_147186413	0.379804	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000109970.3|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2 	ENSMUST00000067075.5|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2
mm10_v2_chr16_+_45093611_45093622	0.364646	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000099498.2|Ccdc80|ENSMUSG00000022665.8|coiled-coil domain containing 80
mm10_v2_chrX_+_103356464_103356488	0.355086	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr2_-_168207063_168207142	0.337287	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000088001.5|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chr15_-_13173607_13173644	0.329464	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000036439.4|Cdh6|ENSMUSG00000039385.4|cadherin 6
mm10_v2_chrX_+_169685191_169685250	0.328734	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr14_+_54894133_54894155	0.318164	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000116476.2|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1 	ENSMUST00000022808.7|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1 	ENSMUST00000150975.1|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1
mm10_v2_chr3_-_110143937_110144011	0.311927	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000051253.3|Ntng1|ENSMUSG00000050836.3|netrin G1
mm10_v2_chr9_+_113930934_113930987	0.309496	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr7_+_64501687_64501706	0.304828	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000032732.8|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr5_-_137531952_137531984	0.287648	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000140139.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr1_-_12991109_12991177	0.274157	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr3_+_61364507_61364633	0.267304	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000049064.2|Rap2b|ENSMUSG00000036894.2|RAP2B, member of RAS oncogene family
mm10_v2_chr3_+_95164306_95164374	0.246144	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000107217.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENSMUST00000168321.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm10_v2_chr11_-_31671727_31671856	0.244201	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000109415.1|Bod1|ENSMUSG00000044502.10|biorientation of chromosomes in cell division 1
mm10_v2_chr14_-_52104015_52104028	0.242851	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000111610.4|Hnrnpc|ENSMUSG00000060373.8|heterogeneous nuclear ribonucleoprotein C 	ENSMUST00000164655.1|Hnrnpc|ENSMUSG00000060373.8|heterogeneous nuclear ribonucleoprotein C
mm10_v2_chr1_-_165934900_165935036	0.235452	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr8_-_67974567_67974596	0.227458	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr7_+_5015466_5015509	0.217577	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000086349.3|Zfp524|ENSMUSG00000051184.6|zinc finger protein 524
mm10_v2_chr3_-_65529355_65529384	0.213483	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000099076.3|4931440P22Rik|ENSMUSG00000074580.5|RIKEN cDNA 4931440P22 gene
mm10_v2_chr15_+_79690869_79690905	0.211068	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000046463.8|Gtpbp1|ENSMUSG00000042535.8|GTP binding protein 1
mm10_v2_chr7_+_101896817_101896961	0.191818	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000143835.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr12_+_111814170_111814245	0.1789	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000021714.7|Zfyve21|ENSMUSG00000021286.7|zinc finger, FYVE domain containing 21
mm10_v2_chr15_+_81744848_81744848	0.171404	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr7_-_100583072_100583124	0.166268	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000152876.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48 	ENSMUST00000150042.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48
mm10_v2_chr10_+_127420867_127420916	0.158501	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chrM_+_8600_8616	0.151139	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr14_-_76010863_76010931	0.148158	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000088922.4|Gtf2f2|ENSMUSG00000067995.4|general transcription factor IIF, polypeptide 2
mm10_v2_chrX_-_60403947_60404015	0.142046	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000033480.6|Atp11c|ENSMUSG00000062949.7|ATPase, class VI, type 11C 	ENSMUST00000101527.2|Atp11c|ENSMUSG00000062949.7|ATPase, class VI, type 11C
mm10_v2_chr15_+_41830921_41831001	0.141556	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000166917.1|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr9_+_21955747_21955769	0.137101	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000053583.5|Swsap1|ENSMUSG00000051238.5|SWIM type zinc finger 7 associated protein 1
mm10_v2_chr13_+_55445301_55445374	0.131519	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000001115.8|Grk6|ENSMUSG00000074886.4|G protein-coupled receptor kinase 6 	ENSMUST00000099482.3|Grk6|ENSMUSG00000074886.4|G protein-coupled receptor kinase 6
mm10_v2_chr5_-_131616599_131616611	0.130836	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000161804.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chrX_+_16619698_16619758	0.118086	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000026013.5|Maoa|ENSMUSG00000025037.6|monoamine oxidase A
mm10_v2_chr7_-_34654342_34654398	0.110445	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000108069.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr7_+_64185459_64185601	0.099666	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000177102.2|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107519.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000137650.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000032737.5|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107515.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000144996.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1
mm10_v2_chrM_+_7759_7927	0.0946949	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr17_+_73107982_73108080	0.0895401	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000130574.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000149064.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000067545.6|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1
mm10_v2_chr17_-_29007925_29007962	0.0766869	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000009138.5|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38 	ENSMUST00000119274.1|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38
mm10_v2_chr9_+_107888129_107888211	0.0741971	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000035202.2|Mon1a|ENSMUSG00000032583.2|MON1 homolog A (yeast)
mm10_v2_chr12_+_55598917_55598917	0.0689852	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000051857.3|Insm2|ENSMUSG00000045440.3|insulinoma-associated 2
mm10_v2_chrM_+_10167_10167	0.0678632	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr1_+_10056922_10056926	0.0625652	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000149214.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1
mm10_v2_chr12_+_55089202_55089202	0.0504798	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr9_-_37147257_37147323	0.0446478	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000039674.5|Pknox2|ENSMUSG00000035934.9|Pbx/knotted 1 homeobox 2 	ENSMUST00000080754.5|Pknox2|ENSMUSG00000035934.9|Pbx/knotted 1 homeobox 2
mm10_v2_chr9_+_108795971_108795994	0.0338256	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000085018.4|Ip6k2|ENSMUSG00000032599.7|inositol hexaphosphate kinase 2
mm10_v2_chr3_+_32436151_32436151	0.0184709	Vsx1_Uncx_Prrx2_Shox2_Noto	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
