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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
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Results for ACUGGCC
Z-value: 0.21
Motif logo
miRNA associated with seed ACUGGCC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-193a-3p
|
MIMAT0000459 |
|
hsa-miR-193b-3p
|
MIMAT0002819 |
Activity profile of ACUGGCC motif
Sorted Z-values of ACUGGCC motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr3_-_123603137 | 0.06 |
ENST00000360304.3
ENST00000359169.1 ENST00000346322.5 ENST00000360772.3 |
MYLK
|
myosin light chain kinase |
| chr1_+_77333117 | 0.06 |
ENST00000477717.1
|
ST6GALNAC5
|
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 |
| chr10_-_100027943 | 0.04 |
ENST00000260702.3
|
LOXL4
|
lysyl oxidase-like 4 |
| chr15_+_44719394 | 0.04 |
ENST00000260327.4
ENST00000396780.1 |
CTDSPL2
|
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 |
| chr12_-_104234966 | 0.03 |
ENST00000392876.3
|
NT5DC3
|
5'-nucleotidase domain containing 3 |
| chr8_-_30585439 | 0.03 |
ENST00000221130.5
|
GSR
|
glutathione reductase |
| chr4_-_23891693 | 0.03 |
ENST00000264867.2
|
PPARGC1A
|
peroxisome proliferator-activated receptor gamma, coactivator 1 alpha |
| chr17_+_68165657 | 0.03 |
ENST00000243457.3
|
KCNJ2
|
potassium inwardly-rectifying channel, subfamily J, member 2 |
| chr20_-_4982132 | 0.03 |
ENST00000338244.1
ENST00000424750.2 |
SLC23A2
|
solute carrier family 23 (ascorbic acid transporter), member 2 |
| chr18_-_53255766 | 0.03 |
ENST00000566286.1
ENST00000564999.1 ENST00000566279.1 ENST00000354452.3 ENST00000356073.4 |
TCF4
|
transcription factor 4 |
| chr9_-_3525968 | 0.03 |
ENST00000382004.3
ENST00000302303.1 ENST00000449190.1 |
RFX3
|
regulatory factor X, 3 (influences HLA class II expression) |
| chr13_-_99404875 | 0.03 |
ENST00000376503.5
|
SLC15A1
|
solute carrier family 15 (oligopeptide transporter), member 1 |
| chr3_-_124774802 | 0.02 |
ENST00000311127.4
|
HEG1
|
heart development protein with EGF-like domains 1 |
| chr5_-_133512683 | 0.02 |
ENST00000353411.6
|
SKP1
|
S-phase kinase-associated protein 1 |
| chr3_-_33481835 | 0.02 |
ENST00000283629.3
|
UBP1
|
upstream binding protein 1 (LBP-1a) |
| chr5_+_172483347 | 0.02 |
ENST00000522692.1
ENST00000296953.2 ENST00000540014.1 ENST00000520420.1 |
CREBRF
|
CREB3 regulatory factor |
| chr2_+_204192942 | 0.02 |
ENST00000295851.5
ENST00000261017.5 |
ABI2
|
abl-interactor 2 |
| chr11_-_115375107 | 0.02 |
ENST00000545380.1
ENST00000452722.3 ENST00000537058.1 ENST00000536727.1 ENST00000542447.2 ENST00000331581.6 |
CADM1
|
cell adhesion molecule 1 |
| chr1_+_182992545 | 0.02 |
ENST00000258341.4
|
LAMC1
|
laminin, gamma 1 (formerly LAMB2) |
| chr8_+_110552337 | 0.02 |
ENST00000337573.5
|
EBAG9
|
estrogen receptor binding site associated, antigen, 9 |
| chr5_-_124080203 | 0.02 |
ENST00000504926.1
|
ZNF608
|
zinc finger protein 608 |
| chr12_+_79258547 | 0.02 |
ENST00000457153.2
|
SYT1
|
synaptotagmin I |
| chr10_-_99052382 | 0.02 |
ENST00000453547.2
ENST00000316676.8 ENST00000358308.3 ENST00000466484.1 ENST00000358531.4 |
ARHGAP19-SLIT1
ARHGAP19
|
ARHGAP19-SLIT1 readthrough (NMD candidate) Rho GTPase activating protein 19 |
| chr10_+_89622870 | 0.02 |
ENST00000371953.3
|
PTEN
|
phosphatase and tensin homolog |
| chr14_+_57046500 | 0.02 |
ENST00000261556.6
|
TMEM260
|
transmembrane protein 260 |
| chr12_-_57030115 | 0.02 |
ENST00000379441.3
ENST00000179765.5 ENST00000551812.1 |
BAZ2A
|
bromodomain adjacent to zinc finger domain, 2A |
| chrX_-_40594755 | 0.02 |
ENST00000324817.1
|
MED14
|
mediator complex subunit 14 |
| chr3_-_176914238 | 0.02 |
ENST00000430069.1
ENST00000428970.1 |
TBL1XR1
|
transducin (beta)-like 1 X-linked receptor 1 |
| chr7_+_108210012 | 0.02 |
ENST00000249356.3
|
DNAJB9
|
DnaJ (Hsp40) homolog, subfamily B, member 9 |
| chr12_-_56236711 | 0.02 |
ENST00000409200.3
|
MMP19
|
matrix metallopeptidase 19 |
| chr11_-_46940074 | 0.02 |
ENST00000378623.1
ENST00000534404.1 |
LRP4
|
low density lipoprotein receptor-related protein 4 |
| chr5_+_78532003 | 0.01 |
ENST00000396137.4
|
JMY
|
junction mediating and regulatory protein, p53 cofactor |
| chr22_-_39548627 | 0.01 |
ENST00000216133.5
|
CBX7
|
chromobox homolog 7 |
| chr20_-_14318248 | 0.01 |
ENST00000378053.3
ENST00000341420.4 |
FLRT3
|
fibronectin leucine rich transmembrane protein 3 |
| chr10_-_38146510 | 0.01 |
ENST00000395867.3
|
ZNF248
|
zinc finger protein 248 |
| chr17_-_65241281 | 0.01 |
ENST00000358691.5
ENST00000580168.1 |
HELZ
|
helicase with zinc finger |
| chr10_-_62149433 | 0.01 |
ENST00000280772.2
|
ANK3
|
ankyrin 3, node of Ranvier (ankyrin G) |
| chr12_-_42538657 | 0.01 |
ENST00000398675.3
|
GXYLT1
|
glucoside xylosyltransferase 1 |
| chr12_+_110437328 | 0.01 |
ENST00000261739.4
|
ANKRD13A
|
ankyrin repeat domain 13A |
| chr5_+_179921430 | 0.01 |
ENST00000393356.1
|
CNOT6
|
CCR4-NOT transcription complex, subunit 6 |
| chr17_+_55333876 | 0.01 |
ENST00000284073.2
|
MSI2
|
musashi RNA-binding protein 2 |
| chr1_-_26232951 | 0.01 |
ENST00000426559.2
ENST00000455785.2 |
STMN1
|
stathmin 1 |
| chr17_+_56160768 | 0.01 |
ENST00000579991.2
|
DYNLL2
|
dynein, light chain, LC8-type 2 |
| chr14_-_77495007 | 0.01 |
ENST00000238647.3
|
IRF2BPL
|
interferon regulatory factor 2 binding protein-like |
| chr22_+_40390930 | 0.01 |
ENST00000333407.6
|
FAM83F
|
family with sequence similarity 83, member F |
| chr10_-_94333784 | 0.01 |
ENST00000265986.6
|
IDE
|
insulin-degrading enzyme |
| chr2_-_208030647 | 0.01 |
ENST00000309446.6
|
KLF7
|
Kruppel-like factor 7 (ubiquitous) |
| chr14_-_50698276 | 0.01 |
ENST00000216373.5
|
SOS2
|
son of sevenless homolog 2 (Drosophila) |
| chr12_-_31744031 | 0.01 |
ENST00000389082.5
|
DENND5B
|
DENN/MADD domain containing 5B |
| chr1_-_67519782 | 0.01 |
ENST00000235345.5
|
SLC35D1
|
solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1 |
| chr7_-_143059845 | 0.01 |
ENST00000443739.2
|
FAM131B
|
family with sequence similarity 131, member B |
| chr11_-_77532050 | 0.01 |
ENST00000308488.6
|
RSF1
|
remodeling and spacing factor 1 |
| chr2_-_217560248 | 0.01 |
ENST00000233813.4
|
IGFBP5
|
insulin-like growth factor binding protein 5 |
| chr7_+_104654623 | 0.01 |
ENST00000311117.3
ENST00000334877.4 ENST00000257745.4 ENST00000334914.7 ENST00000478990.1 ENST00000495267.1 ENST00000476671.1 |
KMT2E
|
lysine (K)-specific methyltransferase 2E |
| chrX_+_49687216 | 0.01 |
ENST00000376088.3
|
CLCN5
|
chloride channel, voltage-sensitive 5 |
| chr17_+_48796905 | 0.01 |
ENST00000505658.1
ENST00000393227.2 ENST00000240304.1 ENST00000311571.3 ENST00000505619.1 ENST00000544170.1 ENST00000510984.1 |
LUC7L3
|
LUC7-like 3 (S. cerevisiae) |
| chr11_-_27494279 | 0.01 |
ENST00000379214.4
|
LGR4
|
leucine-rich repeat containing G protein-coupled receptor 4 |
| chr10_+_97515409 | 0.01 |
ENST00000371207.3
ENST00000543964.1 |
ENTPD1
|
ectonucleoside triphosphate diphosphohydrolase 1 |
| chr12_-_96794143 | 0.01 |
ENST00000543119.2
|
CDK17
|
cyclin-dependent kinase 17 |
| chr8_-_101965146 | 0.01 |
ENST00000395957.2
ENST00000395948.2 ENST00000457309.1 |
YWHAZ
|
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta |
| chr4_+_55524085 | 0.01 |
ENST00000412167.2
ENST00000288135.5 |
KIT
|
v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog |
| chr17_+_44668035 | 0.01 |
ENST00000398238.4
ENST00000225282.8 |
NSF
|
N-ethylmaleimide-sensitive factor |
| chr3_-_52312636 | 0.01 |
ENST00000296490.3
|
WDR82
|
WD repeat domain 82 |
| chr11_+_34073195 | 0.01 |
ENST00000341394.4
|
CAPRIN1
|
cell cycle associated protein 1 |
| chr17_-_66287257 | 0.01 |
ENST00000327268.4
|
SLC16A6
|
solute carrier family 16, member 6 |
| chr2_+_242641442 | 0.01 |
ENST00000313552.6
ENST00000406941.1 |
ING5
|
inhibitor of growth family, member 5 |
| chr10_-_102279586 | 0.01 |
ENST00000370345.3
ENST00000451524.1 ENST00000370329.5 |
SEC31B
|
SEC31 homolog B (S. cerevisiae) |
| chr8_-_95961578 | 0.01 |
ENST00000448464.2
ENST00000342697.4 |
TP53INP1
|
tumor protein p53 inducible nuclear protein 1 |
| chr1_-_169863016 | 0.01 |
ENST00000367772.4
ENST00000367771.6 |
SCYL3
|
SCY1-like 3 (S. cerevisiae) |
| chr6_-_75994536 | 0.01 |
ENST00000475111.2
ENST00000230461.6 |
TMEM30A
|
transmembrane protein 30A |
| chr2_-_180726232 | 0.01 |
ENST00000410066.1
|
ZNF385B
|
zinc finger protein 385B |
| chr11_+_120207787 | 0.01 |
ENST00000397843.2
ENST00000356641.3 |
ARHGEF12
|
Rho guanine nucleotide exchange factor (GEF) 12 |
| chr6_+_39760783 | 0.01 |
ENST00000398904.2
ENST00000538976.1 |
DAAM2
|
dishevelled associated activator of morphogenesis 2 |
| chr3_-_131221790 | 0.01 |
ENST00000512877.1
ENST00000264995.3 ENST00000511168.1 ENST00000425847.2 |
MRPL3
|
mitochondrial ribosomal protein L3 |
| chr8_-_66546439 | 0.01 |
ENST00000276569.3
|
ARMC1
|
armadillo repeat containing 1 |
| chr6_-_47277634 | 0.01 |
ENST00000296861.2
|
TNFRSF21
|
tumor necrosis factor receptor superfamily, member 21 |
| chr5_+_65222299 | 0.01 |
ENST00000284037.5
|
ERBB2IP
|
erbb2 interacting protein |
| chr4_+_126237554 | 0.01 |
ENST00000394329.3
|
FAT4
|
FAT atypical cadherin 4 |
| chr20_+_57226284 | 0.01 |
ENST00000458280.1
ENST00000355957.5 ENST00000361770.5 ENST00000312283.8 ENST00000412911.1 ENST00000359617.4 ENST00000371141.4 |
STX16
|
syntaxin 16 |
| chr11_-_17035943 | 0.01 |
ENST00000355661.3
ENST00000532079.1 ENST00000448080.2 ENST00000531066.1 |
PLEKHA7
|
pleckstrin homology domain containing, family A member 7 |
| chr4_-_87281224 | 0.01 |
ENST00000395169.3
ENST00000395161.2 |
MAPK10
|
mitogen-activated protein kinase 10 |
| chr13_+_111365602 | 0.01 |
ENST00000333219.7
|
ING1
|
inhibitor of growth family, member 1 |
| chr1_-_92351769 | 0.00 |
ENST00000212355.4
|
TGFBR3
|
transforming growth factor, beta receptor III |
| chr3_+_132136331 | 0.00 |
ENST00000260818.6
|
DNAJC13
|
DnaJ (Hsp40) homolog, subfamily C, member 13 |
| chr22_+_24951436 | 0.00 |
ENST00000215829.3
|
SNRPD3
|
small nuclear ribonucleoprotein D3 polypeptide 18kDa |
| chr12_+_56623827 | 0.00 |
ENST00000424625.1
ENST00000419753.1 ENST00000454355.2 ENST00000417965.1 ENST00000436633.1 |
SLC39A5
|
solute carrier family 39 (zinc transporter), member 5 |
| chr5_+_133861790 | 0.00 |
ENST00000395003.1
|
PHF15
|
jade family PHD finger 2 |
| chr11_-_124670550 | 0.00 |
ENST00000239614.4
|
MSANTD2
|
Myb/SANT-like DNA-binding domain containing 2 |
| chr22_+_24666763 | 0.00 |
ENST00000437398.1
ENST00000421374.1 ENST00000314328.9 ENST00000541492.1 |
SPECC1L
|
sperm antigen with calponin homology and coiled-coil domains 1-like |
| chr17_-_33416231 | 0.00 |
ENST00000584655.1
ENST00000447669.2 ENST00000315249.7 |
RFFL
|
ring finger and FYVE-like domain containing E3 ubiquitin protein ligase |
| chr1_+_15853308 | 0.00 |
ENST00000375838.1
ENST00000375847.3 ENST00000375849.1 |
DNAJC16
|
DnaJ (Hsp40) homolog, subfamily C, member 16 |
| chr2_+_29204161 | 0.00 |
ENST00000379558.4
ENST00000403861.2 |
FAM179A
|
family with sequence similarity 179, member A |
| chr1_+_151584544 | 0.00 |
ENST00000458013.2
ENST00000368843.3 |
SNX27
|
sorting nexin family member 27 |
| chr10_+_70480963 | 0.00 |
ENST00000265872.6
ENST00000535016.1 ENST00000538031.1 ENST00000543719.1 ENST00000539539.1 ENST00000543225.1 ENST00000536012.1 ENST00000494903.2 |
CCAR1
|
cell division cycle and apoptosis regulator 1 |
| chr1_+_76540386 | 0.00 |
ENST00000328299.3
|
ST6GALNAC3
|
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
| chr12_-_25403737 | 0.00 |
ENST00000256078.4
ENST00000556131.1 ENST00000311936.3 ENST00000557334.1 |
KRAS
|
Kirsten rat sarcoma viral oncogene homolog |
| chr14_+_102228123 | 0.00 |
ENST00000422945.2
ENST00000554442.1 ENST00000556260.2 ENST00000328724.5 ENST00000557268.1 |
PPP2R5C
|
protein phosphatase 2, regulatory subunit B', gamma |
| chr18_+_55711575 | 0.00 |
ENST00000356462.6
ENST00000400345.3 ENST00000589054.1 ENST00000256832.7 |
NEDD4L
|
neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase |
| chrX_+_151806637 | 0.00 |
ENST00000370306.2
|
GABRQ
|
gamma-aminobutyric acid (GABA) A receptor, theta |
| chr21_-_16437255 | 0.00 |
ENST00000400199.1
ENST00000400202.1 |
NRIP1
|
nuclear receptor interacting protein 1 |
| chr3_-_107809816 | 0.00 |
ENST00000361309.5
ENST00000355354.7 |
CD47
|
CD47 molecule |
| chr9_-_135819987 | 0.00 |
ENST00000298552.3
ENST00000403810.1 |
TSC1
|
tuberous sclerosis 1 |
| chr2_-_69870835 | 0.00 |
ENST00000409085.4
ENST00000406297.3 |
AAK1
|
AP2 associated kinase 1 |
| chr1_-_150552006 | 0.00 |
ENST00000307940.3
ENST00000369026.2 |
MCL1
|
myeloid cell leukemia sequence 1 (BCL2-related) |
| chr19_-_14629224 | 0.00 |
ENST00000254322.2
|
DNAJB1
|
DnaJ (Hsp40) homolog, subfamily B, member 1 |
| chr2_+_166326157 | 0.00 |
ENST00000421875.1
ENST00000314499.7 ENST00000409664.1 |
CSRNP3
|
cysteine-serine-rich nuclear protein 3 |
| chr15_+_84322827 | 0.00 |
ENST00000286744.5
ENST00000567476.1 |
ADAMTSL3
|
ADAMTS-like 3 |
| chr14_+_23775971 | 0.00 |
ENST00000250405.5
|
BCL2L2
|
BCL2-like 2 |
| chr1_+_203764742 | 0.00 |
ENST00000432282.1
ENST00000453771.1 ENST00000367214.1 ENST00000367212.3 ENST00000332127.4 |
ZC3H11A
|
zinc finger CCCH-type containing 11A |
| chr20_+_42086525 | 0.00 |
ENST00000244020.3
|
SRSF6
|
serine/arginine-rich splicing factor 6 |
| chr11_+_66188475 | 0.00 |
ENST00000311034.2
|
NPAS4
|
neuronal PAS domain protein 4 |
| chr1_+_111991474 | 0.00 |
ENST00000369722.3
|
ATP5F1
|
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1 |
| chr11_+_33563821 | 0.00 |
ENST00000321505.4
ENST00000265654.5 ENST00000389726.3 |
KIAA1549L
|
KIAA1549-like |
| chr9_-_95527079 | 0.00 |
ENST00000356884.6
ENST00000375512.3 |
BICD2
|
bicaudal D homolog 2 (Drosophila) |
| chr3_-_128902729 | 0.00 |
ENST00000451728.2
ENST00000446936.2 ENST00000502976.1 ENST00000500450.2 ENST00000441626.2 |
CNBP
|
CCHC-type zinc finger, nucleic acid binding protein |
| chrX_-_47479246 | 0.00 |
ENST00000295987.7
ENST00000340666.4 |
SYN1
|
synapsin I |
| chr14_+_90863327 | 0.00 |
ENST00000356978.4
|
CALM1
|
calmodulin 1 (phosphorylase kinase, delta) |
| chr9_+_115983808 | 0.00 |
ENST00000374210.6
ENST00000374212.4 |
SLC31A1
|
solute carrier family 31 (copper transporter), member 1 |
| chr1_+_26126667 | 0.00 |
ENST00000361547.2
ENST00000354177.4 ENST00000374315.1 |
SEPN1
|
selenoprotein N, 1 |
| chrX_+_110339439 | 0.00 |
ENST00000372010.1
ENST00000519681.1 ENST00000372007.5 |
PAK3
|
p21 protein (Cdc42/Rac)-activated kinase 3 |
| chr3_+_71803201 | 0.00 |
ENST00000304411.2
|
GPR27
|
G protein-coupled receptor 27 |
Network of associatons between targets according to the STRING database.
First level regulatory network of ACUGGCC
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.0 | GO:0014878 | response to electrical stimulus involved in regulation of muscle adaptation(GO:0014878) positive regulation of mitochondrial DNA metabolic process(GO:1901860) response to methionine(GO:1904640) |