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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for HOXC9

Z-value: 1.05

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Transcription factors associated with HOXC9

Gene Symbol Gene ID Gene Info
HOXC9
ENSG00000180806.4 homeobox C9

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HOXC9hg19_v2_chr12_+_54393880_54393962-0.315.5e-01Click!

Activity profile of HOXC9 motif

Sorted Z-values of HOXC9 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr6_+_71104588 1.18 ENST00000418403.1
RP11-462G2.1
RP11-462G2.1
chr12_+_25348186 1.01 ENST00000555711.1
ENST00000556885.1
ENST00000554266.1
ENST00000556351.1
ENST00000556927.1
ENST00000556402.1
ENST00000553788.1
LYRM5
LYR motif containing 5
chr18_+_44812072 0.98 ENST00000598649.1
ENST00000586905.2
CTD-2130O13.1
CTD-2130O13.1
chr9_-_95055923 0.83 ENST00000430417.1
IARS
isoleucyl-tRNA synthetase
chr6_-_52859046 0.78 ENST00000457564.1
ENST00000541324.1
ENST00000370960.1
GSTA4
glutathione S-transferase alpha 4
chr6_-_26189304 0.75 ENST00000340756.2
HIST1H4D
histone cluster 1, H4d
chr17_+_58018269 0.74 ENST00000591035.1
RP11-178C3.1
Uncharacterized protein
chr12_+_25348139 0.68 ENST00000557540.2
ENST00000381356.4
LYRM5
LYR motif containing 5
chr12_+_104235229 0.66 ENST00000551650.1
RP11-650K20.3
Uncharacterized protein
chr22_+_22676808 0.64 ENST00000390290.2
IGLV1-51
immunoglobulin lambda variable 1-51
chr6_-_52859968 0.58 ENST00000370959.1
GSTA4
glutathione S-transferase alpha 4
chr17_+_67498396 0.56 ENST00000588110.1
MAP2K6
mitogen-activated protein kinase kinase 6
chr16_-_66907139 0.55 ENST00000561579.2
NAE1
NEDD8 activating enzyme E1 subunit 1
chr5_-_42811986 0.52 ENST00000511224.1
ENST00000507920.1
ENST00000510965.1
SEPP1
selenoprotein P, plasma, 1
chr12_-_104234966 0.51 ENST00000392876.3
NT5DC3
5'-nucleotidase domain containing 3
chr9_-_15472730 0.49 ENST00000481862.1
PSIP1
PC4 and SFRS1 interacting protein 1
chrX_+_150565038 0.48 ENST00000370361.1
VMA21
VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chr12_+_25205155 0.48 ENST00000550945.1
LRMP
lymphoid-restricted membrane protein
chr1_-_197115818 0.48 ENST00000367409.4
ENST00000294732.7
ASPM
asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
chr11_-_26593779 0.48 ENST00000529533.1
MUC15
mucin 15, cell surface associated
chr14_+_39944025 0.47 ENST00000554328.1
ENST00000556620.1
ENST00000557197.1
RP11-111A21.1
RP11-111A21.1
chr5_-_42812143 0.45 ENST00000514985.1
SEPP1
selenoprotein P, plasma, 1
chr8_-_81083890 0.45 ENST00000518937.1
TPD52
tumor protein D52
chr12_+_25205446 0.45 ENST00000557489.1
ENST00000354454.3
ENST00000536173.1
LRMP
lymphoid-restricted membrane protein
chr11_-_14521349 0.44 ENST00000534234.1
COPB1
coatomer protein complex, subunit beta 1
chr4_-_70626430 0.42 ENST00000310613.3
SULT1B1
sulfotransferase family, cytosolic, 1B, member 1
chr2_+_160590469 0.41 ENST00000409591.1
MARCH7
membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
chr16_+_67552303 0.41 ENST00000562116.1
FAM65A
family with sequence similarity 65, member A
chr12_+_25205568 0.40 ENST00000548766.1
ENST00000556887.1
LRMP
lymphoid-restricted membrane protein
chr9_-_75488984 0.40 ENST00000423171.1
ENST00000449235.1
ENST00000453787.1
RP11-151D14.1
RP11-151D14.1
chr8_-_17555164 0.40 ENST00000297488.6
MTUS1
microtubule associated tumor suppressor 1
chr22_+_45714361 0.39 ENST00000452238.1
FAM118A
family with sequence similarity 118, member A
chr1_+_63989004 0.38 ENST00000371088.4
EFCAB7
EF-hand calcium binding domain 7
chr1_+_152784447 0.38 ENST00000360090.3
LCE1B
late cornified envelope 1B
chr6_-_121655850 0.37 ENST00000422369.1
TBC1D32
TBC1 domain family, member 32
chr16_-_66764119 0.37 ENST00000569320.1
DYNC1LI2
dynein, cytoplasmic 1, light intermediate chain 2
chr19_+_21264943 0.37 ENST00000597424.1
ZNF714
zinc finger protein 714
chr11_-_111649074 0.37 ENST00000534218.1
RP11-108O10.2
RP11-108O10.2
chr3_-_170587815 0.36 ENST00000466674.1
RPL22L1
ribosomal protein L22-like 1
chr8_-_93978309 0.36 ENST00000517858.1
ENST00000378861.5
TRIQK
triple QxxK/R motif containing
chr10_-_96829246 0.36 ENST00000371270.3
ENST00000535898.1
ENST00000539050.1
CYP2C8
cytochrome P450, family 2, subfamily C, polypeptide 8
chr19_+_21106081 0.36 ENST00000300540.3
ENST00000595854.1
ENST00000601284.1
ENST00000328178.8
ENST00000599885.1
ENST00000596476.1
ENST00000345030.6
ZNF85
zinc finger protein 85
chr3_-_170587974 0.35 ENST00000463836.1
RPL22L1
ribosomal protein L22-like 1
chr7_+_138915102 0.35 ENST00000486663.1
UBN2
ubinuclein 2
chr1_+_32379174 0.33 ENST00000391369.1
AL136115.1
HCG2032337; PRO1848; Uncharacterized protein
chr13_+_108921977 0.32 ENST00000430559.1
ENST00000375887.4
TNFSF13B
tumor necrosis factor (ligand) superfamily, member 13b
chr3_+_87276407 0.32 ENST00000471660.1
ENST00000263780.4
ENST00000494980.1
CHMP2B
charged multivesicular body protein 2B
chr8_+_104033296 0.32 ENST00000521514.1
ENST00000518738.1
ATP6V1C1
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
chr17_+_61151306 0.32 ENST00000580068.1
ENST00000580466.1
TANC2
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
chr2_-_17981462 0.32 ENST00000402989.1
ENST00000428868.1
SMC6
structural maintenance of chromosomes 6
chr8_-_17579726 0.31 ENST00000381861.3
MTUS1
microtubule associated tumor suppressor 1
chr8_-_71157595 0.31 ENST00000519724.1
NCOA2
nuclear receptor coactivator 2
chr4_+_71600063 0.31 ENST00000513597.1
RUFY3
RUN and FYVE domain containing 3
chr1_-_113615699 0.30 ENST00000421157.1
RP11-31F15.2
RP11-31F15.2
chrX_+_13671225 0.30 ENST00000545566.1
ENST00000544987.1
ENST00000314720.4
TCEANC
transcription elongation factor A (SII) N-terminal and central domain containing
chr6_-_109702885 0.30 ENST00000504373.1
CD164
CD164 molecule, sialomucin
chr2_-_160568529 0.29 ENST00000418770.1
AC009961.3
AC009961.3
chr3_-_170588163 0.29 ENST00000295830.8
RPL22L1
ribosomal protein L22-like 1
chr2_+_109204909 0.29 ENST00000393310.1
LIMS1
LIM and senescent cell antigen-like domains 1
chr2_+_162016827 0.29 ENST00000429217.1
ENST00000406287.1
ENST00000402568.1
TANK
TRAF family member-associated NFKB activator
chr3_+_56591184 0.29 ENST00000422222.1
ENST00000394672.3
ENST00000326595.7
CCDC66
coiled-coil domain containing 66
chr14_+_60712463 0.28 ENST00000325642.3
ENST00000529574.1
PPM1A
protein phosphatase, Mg2+/Mn2+ dependent, 1A
chr20_+_5987890 0.28 ENST00000378868.4
CRLS1
cardiolipin synthase 1
chr10_+_98592009 0.27 ENST00000540664.1
ENST00000371103.3
LCOR
ligand dependent nuclear receptor corepressor
chrX_+_105937068 0.27 ENST00000324342.3
RNF128
ring finger protein 128, E3 ubiquitin protein ligase
chr19_+_21264980 0.27 ENST00000596053.1
ENST00000597086.1
ENST00000596143.1
ENST00000596367.1
ENST00000601416.1
ZNF714
zinc finger protein 714
chr1_-_204183071 0.27 ENST00000308302.3
GOLT1A
golgi transport 1A
chr7_+_130126165 0.26 ENST00000427521.1
ENST00000416162.2
ENST00000378576.4
MEST
mesoderm specific transcript
chr8_+_92114060 0.26 ENST00000518304.1
LRRC69
leucine rich repeat containing 69
chrX_+_123097014 0.26 ENST00000394478.1
STAG2
stromal antigen 2
chr5_-_139930713 0.26 ENST00000602657.1
SRA1
steroid receptor RNA activator 1
chr12_+_19358228 0.25 ENST00000424268.1
ENST00000543806.1
PLEKHA5
pleckstrin homology domain containing, family A member 5
chr14_+_57671888 0.25 ENST00000391612.1
AL391152.1
AL391152.1
chr17_+_48823975 0.25 ENST00000513969.1
ENST00000503728.1
LUC7L3
LUC7-like 3 (S. cerevisiae)
chr7_+_64838712 0.25 ENST00000328747.7
ENST00000431504.1
ENST00000357512.2
ZNF92
zinc finger protein 92
chr8_-_82608409 0.25 ENST00000518568.1
SLC10A5
solute carrier family 10, member 5
chr16_+_58074069 0.24 ENST00000570065.1
MMP15
matrix metallopeptidase 15 (membrane-inserted)
chr11_+_65266507 0.24 ENST00000544868.1
MALAT1
metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
chr10_+_5238793 0.24 ENST00000263126.1
AKR1C4
aldo-keto reductase family 1, member C4
chr2_-_109605663 0.24 ENST00000409271.1
ENST00000258443.2
ENST00000376651.1
EDAR
ectodysplasin A receptor
chr3_+_143690640 0.24 ENST00000315691.3
C3orf58
chromosome 3 open reading frame 58
chr19_-_23869999 0.24 ENST00000601935.1
ENST00000359788.4
ENST00000600313.1
ENST00000596211.1
ENST00000599168.1
ZNF675
zinc finger protein 675
chr7_+_7196565 0.23 ENST00000429911.1
C1GALT1
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
chr8_-_42396185 0.23 ENST00000518717.1
SLC20A2
solute carrier family 20 (phosphate transporter), member 2
chr7_+_64838786 0.23 ENST00000450302.2
ZNF92
zinc finger protein 92
chr8_+_104033277 0.23 ENST00000518857.1
ENST00000395862.3
ATP6V1C1
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
chr8_-_93978216 0.22 ENST00000517751.1
ENST00000524107.1
TRIQK
triple QxxK/R motif containing
chr11_-_26593677 0.22 ENST00000527569.1
MUC15
mucin 15, cell surface associated
chr6_-_111804905 0.21 ENST00000358835.3
ENST00000435970.1
REV3L
REV3-like, polymerase (DNA directed), zeta, catalytic subunit
chr1_+_233086326 0.21 ENST00000366628.5
ENST00000366627.4
NTPCR
nucleoside-triphosphatase, cancer-related
chr2_-_134326009 0.21 ENST00000409261.1
ENST00000409213.1
NCKAP5
NCK-associated protein 5
chr2_+_161993465 0.21 ENST00000457476.1
TANK
TRAF family member-associated NFKB activator
chr2_-_8723918 0.21 ENST00000454224.1
AC011747.4
AC011747.4
chr8_-_80993010 0.21 ENST00000537855.1
ENST00000520527.1
ENST00000517427.1
ENST00000448733.2
ENST00000379097.3
TPD52
tumor protein D52
chr13_-_30424821 0.20 ENST00000380680.4
UBL3
ubiquitin-like 3
chr8_-_93978333 0.20 ENST00000524037.1
ENST00000520430.1
ENST00000521617.1
TRIQK
triple QxxK/R motif containing
chr11_+_19798964 0.20 ENST00000527559.2
NAV2
neuron navigator 2
chr18_+_32558380 0.20 ENST00000588349.2
MAPRE2
microtubule-associated protein, RP/EB family, member 2
chr18_+_20378191 0.20 ENST00000583700.1
RBBP8
retinoblastoma binding protein 8
chr2_+_38177575 0.20 ENST00000407257.1
ENST00000417700.2
ENST00000234195.3
ENST00000442857.1
RMDN2
regulator of microtubule dynamics 2
chr14_+_55494323 0.20 ENST00000339298.2
SOCS4
suppressor of cytokine signaling 4
chr5_-_111093167 0.20 ENST00000446294.2
ENST00000419114.2
NREP
neuronal regeneration related protein
chr12_-_63328817 0.20 ENST00000228705.6
PPM1H
protein phosphatase, Mg2+/Mn2+ dependent, 1H
chr18_-_32870148 0.19 ENST00000589178.1
ENST00000333206.5
ENST00000592278.1
ENST00000592211.1
ENST00000420878.3
ENST00000383091.2
ENST00000586922.2
ZSCAN30
RP11-158H5.7
zinc finger and SCAN domain containing 30
RP11-158H5.7
chr16_-_48281305 0.19 ENST00000356608.2
ABCC11
ATP-binding cassette, sub-family C (CFTR/MRP), member 11
chr12_-_110906027 0.19 ENST00000537466.2
ENST00000550974.1
ENST00000228827.3
GPN3
GPN-loop GTPase 3
chr15_+_45003675 0.19 ENST00000558401.1
ENST00000559916.1
ENST00000544417.1
B2M
beta-2-microglobulin
chr3_+_69812701 0.19 ENST00000472437.1
MITF
microphthalmia-associated transcription factor
chr2_+_172309634 0.19 ENST00000339506.3
DCAF17
DDB1 and CUL4 associated factor 17
chr4_-_103749105 0.19 ENST00000394801.4
ENST00000394804.2
UBE2D3
ubiquitin-conjugating enzyme E2D 3
chr10_-_113943447 0.19 ENST00000369425.1
ENST00000348367.4
ENST00000423155.1
GPAM
glycerol-3-phosphate acyltransferase, mitochondrial
chr15_+_40987327 0.19 ENST00000423169.2
ENST00000267868.3
ENST00000557850.1
ENST00000532743.1
ENST00000382643.3
RAD51
RAD51 recombinase
chr4_-_100065440 0.19 ENST00000508393.1
ENST00000265512.7
ADH4
alcohol dehydrogenase 4 (class II), pi polypeptide
chr19_+_9296279 0.18 ENST00000344248.2
OR7D2
olfactory receptor, family 7, subfamily D, member 2
chr8_-_18711866 0.18 ENST00000519851.1
PSD3
pleckstrin and Sec7 domain containing 3
chr5_+_136070614 0.18 ENST00000502421.1
CTB-1I21.1
CTB-1I21.1
chr4_+_86525299 0.18 ENST00000512201.1
ARHGAP24
Rho GTPase activating protein 24
chr4_+_106631966 0.18 ENST00000360505.5
ENST00000510865.1
ENST00000509336.1
GSTCD
glutathione S-transferase, C-terminal domain containing
chr16_+_53412368 0.18 ENST00000565189.1
RP11-44F14.2
RP11-44F14.2
chr8_-_81083731 0.17 ENST00000379096.5
TPD52
tumor protein D52
chr8_+_52730143 0.17 ENST00000415643.1
AC090186.1
Uncharacterized protein
chr2_+_196440692 0.17 ENST00000458054.1
SLC39A10
solute carrier family 39 (zinc transporter), member 10
chr8_-_93978357 0.17 ENST00000522925.1
ENST00000522903.1
ENST00000537541.1
ENST00000518748.1
ENST00000519069.1
ENST00000521988.1
TRIQK
triple QxxK/R motif containing
chr14_+_31046959 0.17 ENST00000547532.1
ENST00000555429.1
G2E3
G2/M-phase specific E3 ubiquitin protein ligase
chr13_-_36050819 0.17 ENST00000379919.4
MAB21L1
mab-21-like 1 (C. elegans)
chr3_-_47023455 0.16 ENST00000446836.1
ENST00000425441.1
CCDC12
coiled-coil domain containing 12
chr11_+_114310164 0.16 ENST00000544196.1
ENST00000539754.1
ENST00000539275.1
REXO2
RNA exonuclease 2
chr9_+_2029019 0.16 ENST00000382194.1
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr2_+_210443993 0.16 ENST00000392193.1
MAP2
microtubule-associated protein 2
chr2_+_210444298 0.16 ENST00000445941.1
MAP2
microtubule-associated protein 2
chr3_-_25824872 0.16 ENST00000308710.5
NGLY1
N-glycanase 1
chr1_-_147599549 0.16 ENST00000369228.5
NBPF24
neuroblastoma breakpoint family, member 24
chr3_+_113251143 0.16 ENST00000264852.4
ENST00000393830.3
SIDT1
SID1 transmembrane family, member 1
chr2_+_109271481 0.16 ENST00000542845.1
ENST00000393314.2
LIMS1
LIM and senescent cell antigen-like domains 1
chr19_-_20748541 0.16 ENST00000427401.4
ENST00000594419.1
ZNF737
zinc finger protein 737
chr12_-_15815626 0.15 ENST00000540613.1
EPS8
epidermal growth factor receptor pathway substrate 8
chr16_-_56485257 0.15 ENST00000300291.5
NUDT21
nudix (nucleoside diphosphate linked moiety X)-type motif 21
chrX_+_105936982 0.15 ENST00000418562.1
RNF128
ring finger protein 128, E3 ubiquitin protein ligase
chrX_+_41193407 0.15 ENST00000457138.2
ENST00000441189.2
DDX3X
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
chr2_+_219472488 0.15 ENST00000450993.2
PLCD4
phospholipase C, delta 4
chr10_-_128110441 0.15 ENST00000456514.1
LINC00601
long intergenic non-protein coding RNA 601
chr6_-_146057144 0.15 ENST00000367519.3
EPM2A
epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
chr7_+_130126012 0.15 ENST00000341441.5
MEST
mesoderm specific transcript
chr22_-_24126145 0.15 ENST00000598975.1
AP000349.1
Uncharacterized protein
chr3_+_41241596 0.14 ENST00000450969.1
CTNNB1
catenin (cadherin-associated protein), beta 1, 88kDa
chr19_+_21265028 0.14 ENST00000291770.7
ZNF714
zinc finger protein 714
chr12_+_19358192 0.14 ENST00000538305.1
PLEKHA5
pleckstrin homology domain containing, family A member 5
chr1_-_212965104 0.14 ENST00000422588.2
ENST00000366975.6
ENST00000366977.3
ENST00000366976.1
NSL1
NSL1, MIS12 kinetochore complex component
chr11_-_104972158 0.14 ENST00000598974.1
ENST00000593315.1
ENST00000594519.1
ENST00000415981.2
ENST00000525374.1
ENST00000375707.1
CASP1
CARD16
CARD17
caspase 1, apoptosis-related cysteine peptidase
caspase recruitment domain family, member 16
caspase recruitment domain family, member 17
chr16_+_71560023 0.14 ENST00000572450.1
CHST4
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
chr18_-_74839891 0.14 ENST00000581878.1
MBP
myelin basic protein
chr2_+_128458514 0.14 ENST00000310981.4
SFT2D3
SFT2 domain containing 3
chr2_-_200320768 0.14 ENST00000428695.1
SATB2
SATB homeobox 2
chr17_+_44803922 0.14 ENST00000465370.1
NSF
N-ethylmaleimide-sensitive factor
chr2_+_162016916 0.14 ENST00000405852.1
TANK
TRAF family member-associated NFKB activator
chr9_+_80912059 0.14 ENST00000347159.2
ENST00000376588.3
PSAT1
phosphoserine aminotransferase 1
chr9_-_98189055 0.14 ENST00000433644.2
RP11-435O5.2
RP11-435O5.2
chr12_+_25205628 0.14 ENST00000554942.1
LRMP
lymphoid-restricted membrane protein
chrX_-_13835147 0.14 ENST00000493677.1
ENST00000355135.2
GPM6B
glycoprotein M6B
chrX_-_13321511 0.14 ENST00000412485.1
ENST00000443965.1
GS1-600G8.5
GS1-600G8.5
chr5_+_169011033 0.13 ENST00000513795.1
SPDL1
spindle apparatus coiled-coil protein 1
chr10_+_76871353 0.13 ENST00000542569.1
SAMD8
sterile alpha motif domain containing 8
chr3_+_69811858 0.13 ENST00000433517.1
MITF
microphthalmia-associated transcription factor
chr5_-_159846066 0.13 ENST00000519349.1
ENST00000520664.1
SLU7
SLU7 splicing factor homolog (S. cerevisiae)
chr3_+_112709804 0.13 ENST00000383677.3
GTPBP8
GTP-binding protein 8 (putative)
chr20_-_36152914 0.13 ENST00000397131.1
BLCAP
bladder cancer associated protein
chr12_-_8803128 0.13 ENST00000543467.1
MFAP5
microfibrillar associated protein 5
chr22_+_21133469 0.13 ENST00000406799.1
SERPIND1
serpin peptidase inhibitor, clade D (heparin cofactor), member 1
chr2_-_86850949 0.13 ENST00000237455.4
RNF103
ring finger protein 103
chr18_+_29027696 0.12 ENST00000257189.4
DSG3
desmoglein 3
chr2_+_187371440 0.12 ENST00000445547.1
ZC3H15
zinc finger CCCH-type containing 15
chr1_+_87012922 0.12 ENST00000263723.5
CLCA4
chloride channel accessory 4
chr13_+_49551020 0.12 ENST00000541916.1
FNDC3A
fibronectin type III domain containing 3A
chr5_-_145562147 0.12 ENST00000545646.1
ENST00000274562.9
ENST00000510191.1
ENST00000394434.2
LARS
leucyl-tRNA synthetase
chr10_-_13344341 0.12 ENST00000396920.3
PHYH
phytanoyl-CoA 2-hydroxylase
chr1_-_157069590 0.12 ENST00000454449.2
ETV3L
ets variant 3-like
chr8_-_116504448 0.12 ENST00000518018.1
TRPS1
trichorhinophalangeal syndrome I
chr1_+_150039877 0.12 ENST00000419023.1
VPS45
vacuolar protein sorting 45 homolog (S. cerevisiae)
chr16_+_68119764 0.12 ENST00000570212.1
ENST00000562926.1
NFATC3
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
chr6_+_111303218 0.12 ENST00000441448.2
RPF2
ribosome production factor 2 homolog (S. cerevisiae)
chr7_+_102937869 0.12 ENST00000249269.4
ENST00000428154.1
ENST00000420236.2
PMPCB
peptidase (mitochondrial processing) beta
chr2_+_207630081 0.11 ENST00000236980.6
ENST00000418289.1
ENST00000402774.3
ENST00000403094.3
FASTKD2
FAST kinase domains 2
chr2_+_109237717 0.11 ENST00000409441.1
LIMS1
LIM and senescent cell antigen-like domains 1
chr3_+_111630451 0.11 ENST00000495180.1
PHLDB2
pleckstrin homology-like domain, family B, member 2
chr8_-_93978346 0.11 ENST00000523580.1
TRIQK
triple QxxK/R motif containing
chr7_+_93690435 0.11 ENST00000438538.1
AC003092.1
AC003092.1
chr8_+_132916318 0.11 ENST00000254624.5
ENST00000522709.1
EFR3A
EFR3 homolog A (S. cerevisiae)
chr2_+_158114051 0.11 ENST00000259056.4
GALNT5
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
chr17_-_28257080 0.11 ENST00000579954.1
ENST00000540801.1
ENST00000269033.3
ENST00000590153.1
ENST00000582084.1
SSH2
slingshot protein phosphatase 2
chr10_+_115614370 0.11 ENST00000369301.3
NHLRC2
NHL repeat containing 2
chrX_-_131353461 0.11 ENST00000370874.1
RAP2C
RAP2C, member of RAS oncogene family
chr22_-_32766972 0.11 ENST00000382084.4
ENST00000382086.2
RFPL3S
RFPL3 antisense
chr17_-_42767092 0.11 ENST00000588687.1
CCDC43
coiled-coil domain containing 43
chr8_-_101718991 0.11 ENST00000517990.1
PABPC1
poly(A) binding protein, cytoplasmic 1
chr4_-_103748880 0.10 ENST00000453744.2
ENST00000349311.8
UBE2D3
ubiquitin-conjugating enzyme E2D 3
chr9_-_20382446 0.10 ENST00000380321.1
MLLT3
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
chr1_+_163039143 0.10 ENST00000531057.1
ENST00000527809.1
ENST00000367908.4
RGS4
regulator of G-protein signaling 4
chr17_+_76494911 0.10 ENST00000598378.1
DNAH17-AS1
DNAH17 antisense RNA 1
chrX_+_120181457 0.10 ENST00000328078.1
GLUD2
glutamate dehydrogenase 2
chr2_-_122262593 0.10 ENST00000418989.1
CLASP1
cytoplasmic linker associated protein 1

Network of associatons between targets according to the STRING database.

First level regulatory network of HOXC9

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.2 0.5 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.5 GO:0072709 cellular response to sorbitol(GO:0072709)
0.1 0.3 GO:1904017 cellular response to Thyroglobulin triiodothyronine(GO:1904017)
0.1 0.8 GO:2000158 positive regulation of ubiquitin-specific protease activity(GO:2000158)
0.1 0.3 GO:0031296 positive regulation of germinal center formation(GO:0002636) B cell costimulation(GO:0031296)
0.1 0.3 GO:0061763 multivesicular body-lysosome fusion(GO:0061763)
0.1 0.2 GO:1903989 positive regulation of iron ion transport(GO:0034758) positive regulation of iron ion transmembrane transport(GO:0034761) regulation of iron ion import(GO:1900390) regulation of ferrous iron import into cell(GO:1903989) positive regulation of ferrous iron import into cell(GO:1903991) regulation of ferrous iron binding(GO:1904432) positive regulation of ferrous iron binding(GO:1904434) regulation of transferrin receptor binding(GO:1904435) positive regulation of transferrin receptor binding(GO:1904437) regulation of ferrous iron import across plasma membrane(GO:1904438) positive regulation of ferrous iron import across plasma membrane(GO:1904440)
0.1 0.2 GO:1990426 homologous recombination-dependent replication fork processing(GO:1990426)
0.1 0.2 GO:0016267 O-glycan processing, core 1(GO:0016267)
0.1 0.5 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 0.4 GO:0002933 lipid hydroxylation(GO:0002933)
0.0 0.2 GO:0071684 blastocyst hatching(GO:0001835) hatching(GO:0035188) organism emergence from protective structure(GO:0071684)
0.0 0.2 GO:1990022 RNA polymerase II complex import to nucleus(GO:0044376) RNA polymerase III complex localization to nucleus(GO:1990022)
0.0 0.5 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.1 GO:0006429 glutaminyl-tRNA aminoacylation(GO:0006425) leucyl-tRNA aminoacylation(GO:0006429)
0.0 0.4 GO:0003406 retinal pigment epithelium development(GO:0003406)
0.0 1.4 GO:1901687 glutathione derivative metabolic process(GO:1901685) glutathione derivative biosynthetic process(GO:1901687)
0.0 0.1 GO:1904501 glial cell fate determination(GO:0007403) canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation(GO:0061324) regulation of chromatin-mediated maintenance of transcription(GO:1904499) positive regulation of chromatin-mediated maintenance of transcription(GO:1904501) regulation of euchromatin binding(GO:1904793)
0.0 0.3 GO:0006499 N-terminal protein myristoylation(GO:0006499)
0.0 0.1 GO:0050717 positive regulation of interleukin-1 alpha secretion(GO:0050717)
0.0 0.3 GO:1904386 response to thyroxine(GO:0097068) response to L-phenylalanine derivative(GO:1904386)
0.0 0.2 GO:1903615 regulation of protein tyrosine phosphatase activity(GO:1903613) positive regulation of protein tyrosine phosphatase activity(GO:1903615)
0.0 0.1 GO:0061534 gamma-aminobutyric acid secretion, neurotransmission(GO:0061534)
0.0 0.2 GO:0035407 histone H3-T11 phosphorylation(GO:0035407)
0.0 0.2 GO:0071395 response to jasmonic acid(GO:0009753) cellular response to jasmonic acid stimulus(GO:0071395)
0.0 0.4 GO:1904352 positive regulation of protein catabolic process in the vacuole(GO:1904352)
0.0 0.1 GO:0060489 orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490)
0.0 0.1 GO:0046292 formaldehyde metabolic process(GO:0046292)
0.0 0.2 GO:0003025 regulation of systemic arterial blood pressure by baroreceptor feedback(GO:0003025)
0.0 0.2 GO:0006420 arginyl-tRNA aminoacylation(GO:0006420)
0.0 0.2 GO:2000660 negative regulation of interleukin-1-mediated signaling pathway(GO:2000660)
0.0 0.1 GO:0002188 translation reinitiation(GO:0002188)
0.0 0.1 GO:0097089 methyl-branched fatty acid metabolic process(GO:0097089)
0.0 0.1 GO:0035633 maintenance of blood-brain barrier(GO:0035633) regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209)
0.0 0.1 GO:1902775 mitochondrial large ribosomal subunit assembly(GO:1902775)
0.0 0.1 GO:0042816 vitamin B6 metabolic process(GO:0042816)
0.0 0.3 GO:0070070 proton-transporting V-type ATPase complex assembly(GO:0070070) vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.0 0.1 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.0 0.1 GO:2000525 negative regulation of regulatory T cell differentiation(GO:0045590) regulation of T cell costimulation(GO:2000523) positive regulation of T cell costimulation(GO:2000525)
0.0 0.2 GO:0071651 positive regulation of chemokine (C-C motif) ligand 5 production(GO:0071651)
0.0 0.1 GO:0042264 peptidyl-aspartic acid hydroxylation(GO:0042264)
0.0 0.3 GO:0000722 telomere maintenance via recombination(GO:0000722)
0.0 0.2 GO:0070236 negative regulation of activation-induced cell death of T cells(GO:0070236)
0.0 0.4 GO:0007498 mesoderm development(GO:0007498)
0.0 0.1 GO:1901143 insulin catabolic process(GO:1901143)
0.0 0.2 GO:0070358 actin polymerization-dependent cell motility(GO:0070358)
0.0 0.2 GO:0006477 protein sulfation(GO:0006477)
0.0 0.3 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.0 0.1 GO:0008218 bioluminescence(GO:0008218)
0.0 0.4 GO:0002643 regulation of tolerance induction(GO:0002643)
0.0 0.5 GO:0090383 phagosome acidification(GO:0090383)
0.0 0.2 GO:0060605 tube lumen cavitation(GO:0060605) salivary gland cavitation(GO:0060662)
0.0 0.1 GO:0010513 positive regulation of phosphatidylinositol biosynthetic process(GO:0010513)
0.0 0.1 GO:0035494 SNARE complex disassembly(GO:0035494)
0.0 0.3 GO:0009886 post-embryonic morphogenesis(GO:0009886)
0.0 0.2 GO:0044341 sodium-dependent phosphate transport(GO:0044341)
0.0 0.1 GO:1990034 calcium ion export from cell(GO:1990034)
0.0 0.1 GO:0021902 commitment of neuronal cell to specific neuron type in forebrain(GO:0021902)
0.0 0.1 GO:0001880 Mullerian duct regression(GO:0001880)
0.0 0.2 GO:1903690 negative regulation of wound healing, spreading of epidermal cells(GO:1903690)
0.0 0.0 GO:0061030 epithelial cell differentiation involved in mammary gland alveolus development(GO:0061030)
0.0 0.1 GO:0051612 negative regulation of neurotransmitter uptake(GO:0051581) regulation of serotonin uptake(GO:0051611) negative regulation of serotonin uptake(GO:0051612)
0.0 0.1 GO:0006686 sphingomyelin biosynthetic process(GO:0006686)
0.0 0.1 GO:0000389 mRNA 3'-splice site recognition(GO:0000389)
0.0 0.1 GO:0009098 branched-chain amino acid biosynthetic process(GO:0009082) leucine biosynthetic process(GO:0009098) valine biosynthetic process(GO:0009099)
0.0 0.6 GO:0051894 positive regulation of focal adhesion assembly(GO:0051894)
0.0 0.1 GO:0015722 canalicular bile acid transport(GO:0015722)
0.0 0.1 GO:1902570 protein localization to nucleolus(GO:1902570)
0.0 0.2 GO:0033227 dsRNA transport(GO:0033227)
0.0 0.0 GO:0035726 common myeloid progenitor cell proliferation(GO:0035726)
0.0 0.0 GO:0071418 cellular response to amine stimulus(GO:0071418)
0.0 0.1 GO:0032485 Ral protein signal transduction(GO:0032484) regulation of Ral protein signal transduction(GO:0032485)
0.0 1.6 GO:0007338 single fertilization(GO:0007338)
0.0 0.6 GO:0006958 complement activation, classical pathway(GO:0006958)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain(GO:0000221)
0.1 0.4 GO:0097442 CA3 pyramidal cell dendrite(GO:0097442)
0.0 0.5 GO:0072687 meiotic spindle(GO:0072687)
0.0 1.1 GO:0017101 aminoacyl-tRNA synthetase multienzyme complex(GO:0017101)
0.0 0.3 GO:0035061 interchromatin granule(GO:0035061)
0.0 0.2 GO:0031905 early endosome lumen(GO:0031905)
0.0 0.7 GO:0030126 COPI vesicle coat(GO:0030126)
0.0 0.2 GO:0016035 zeta DNA polymerase complex(GO:0016035)
0.0 0.1 GO:0000444 MIS12/MIND type complex(GO:0000444)
0.0 0.1 GO:0031592 centrosomal corona(GO:0031592)
0.0 0.1 GO:0097179 protease inhibitor complex(GO:0097179)
0.0 0.1 GO:0060187 cell pole(GO:0060187)
0.0 0.1 GO:0070369 Scrib-APC-beta-catenin complex(GO:0034750) beta-catenin-TCF7L2 complex(GO:0070369)
0.0 0.3 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.1 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006)
0.0 0.5 GO:0035327 transcriptionally active chromatin(GO:0035327)
0.0 0.2 GO:0042382 paraspeckles(GO:0042382)
0.0 1.4 GO:0035577 azurophil granule membrane(GO:0035577)
0.0 0.1 GO:0070852 cell body fiber(GO:0070852)
0.0 0.1 GO:0036128 CatSper complex(GO:0036128)
0.0 0.1 GO:0033269 internode region of axon(GO:0033269)
0.0 0.4 GO:0005868 cytoplasmic dynein complex(GO:0005868)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.2 0.5 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.1 0.8 GO:0035800 deubiquitinase activator activity(GO:0035800)
0.1 0.3 GO:0008808 cardiolipin synthase activity(GO:0008808) phosphatidyltransferase activity(GO:0030572) CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase activity(GO:0043337)
0.1 0.4 GO:0033695 oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor(GO:0033695) caffeine oxidase activity(GO:0034875)
0.1 0.2 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.1 0.3 GO:0010861 thyroid hormone receptor activator activity(GO:0010861) thyroid hormone receptor coactivator activity(GO:0030375)
0.1 0.2 GO:0016263 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity(GO:0016263)
0.1 0.5 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.1 0.2 GO:0000224 peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity(GO:0000224)
0.0 0.2 GO:0047023 androsterone dehydrogenase activity(GO:0047023)
0.0 0.1 GO:0004823 glutamine-tRNA ligase activity(GO:0004819) leucine-tRNA ligase activity(GO:0004823)
0.0 0.1 GO:0048244 phytanoyl-CoA dioxygenase activity(GO:0048244)
0.0 0.5 GO:0097100 supercoiled DNA binding(GO:0097100)
0.0 0.2 GO:0098519 nucleotide phosphatase activity, acting on free nucleotides(GO:0098519)
0.0 0.2 GO:0008508 bile acid:sodium symporter activity(GO:0008508)
0.0 0.2 GO:0035402 histone kinase activity (H3-T11 specific)(GO:0035402)
0.0 0.1 GO:0004597 peptide-aspartate beta-dioxygenase activity(GO:0004597)
0.0 0.2 GO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity(GO:0001517)
0.0 0.2 GO:0004814 arginine-tRNA ligase activity(GO:0004814)
0.0 1.4 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.1 GO:0031626 beta-endorphin binding(GO:0031626)
0.0 0.1 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.0 0.2 GO:0051033 nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)
0.0 0.2 GO:0015319 sodium:inorganic phosphate symporter activity(GO:0015319)
0.0 0.1 GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor(GO:0016639)
0.0 0.2 GO:0043515 kinetochore binding(GO:0043515)
0.0 0.1 GO:0015432 bile acid-exporting ATPase activity(GO:0015432)
0.0 0.1 GO:0019115 benzaldehyde dehydrogenase activity(GO:0019115)
0.0 0.5 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.4 GO:0010314 phosphatidylinositol-5-phosphate binding(GO:0010314)
0.0 0.1 GO:0033188 sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.0 0.1 GO:0060001 minus-end directed microfilament motor activity(GO:0060001)
0.0 0.3 GO:0033192 calmodulin-dependent protein phosphatase activity(GO:0033192)
0.0 0.1 GO:0097199 cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:0097199)
0.0 0.4 GO:0045504 dynein heavy chain binding(GO:0045504)
0.0 0.4 GO:0002162 dystroglycan binding(GO:0002162)
0.0 0.1 GO:0050253 retinyl-palmitate esterase activity(GO:0050253)
0.0 0.2 GO:0043225 anion transmembrane-transporting ATPase activity(GO:0043225)
0.0 0.5 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.2 GO:0033592 RNA strand annealing activity(GO:0033592)
0.0 0.2 GO:0043142 single-stranded DNA-dependent ATPase activity(GO:0043142)
0.0 0.1 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 0.1 GO:0089720 caspase binding(GO:0089720)
0.0 0.0 GO:0004852 uroporphyrinogen-III synthase activity(GO:0004852)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.7 PID ANTHRAX PATHWAY Cellular roles of Anthrax toxin
0.0 0.3 PID ERB GENOMIC PATHWAY Validated nuclear estrogen receptor beta network
0.0 0.2 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION Genes involved in APOBEC3G mediated resistance to HIV-1 infection
0.0 1.4 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.0 0.4 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.0 1.1 REACTOME CYTOSOLIC TRNA AMINOACYLATION Genes involved in Cytosolic tRNA aminoacylation
0.0 0.8 REACTOME TRAF6 MEDIATED IRF7 ACTIVATION Genes involved in TRAF6 mediated IRF7 activation
0.0 0.4 REACTOME XENOBIOTICS Genes involved in Xenobiotics
0.0 0.3 REACTOME ACYL CHAIN REMODELLING OF PG Genes involved in Acyl chain remodelling of PG
0.0 0.2 REACTOME ENDOSOMAL VACUOLAR PATHWAY Genes involved in Endosomal/Vacuolar pathway
0.0 0.6 REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS Genes involved in Termination of O-glycan biosynthesis
0.0 0.5 REACTOME INSULIN RECEPTOR RECYCLING Genes involved in Insulin receptor recycling
0.0 0.5 REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS Genes involved in Cell-extracellular matrix interactions
0.0 0.6 REACTOME PACKAGING OF TELOMERE ENDS Genes involved in Packaging Of Telomere Ends
0.0 0.3 REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS Genes involved in Apoptotic cleavage of cell adhesion proteins
0.0 0.1 REACTOME NFKB ACTIVATION THROUGH FADD RIP1 PATHWAY MEDIATED BY CASPASE 8 AND10 Genes involved in NF-kB activation through FADD/RIP-1 pathway mediated by caspase-8 and -10