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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
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Results for HOXD1
Z-value: 0.31
Motif logo
Transcription factors associated with HOXD1
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
HOXD1
|
ENSG00000128645.11 | homeobox D1 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| HOXD1 | hg19_v2_chr2_+_177053307_177053402 | 0.44 | 3.8e-01 | Click! |
Activity profile of HOXD1 motif
Sorted Z-values of HOXD1 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr17_-_57229155 | 0.29 |
ENST00000584089.1
|
SKA2
|
spindle and kinetochore associated complex subunit 2 |
| chr9_-_5339873 | 0.21 |
ENST00000223862.1
ENST00000223858.4 |
RLN1
|
relaxin 1 |
| chr7_+_37723450 | 0.10 |
ENST00000447769.1
|
GPR141
|
G protein-coupled receptor 141 |
| chr10_-_4285835 | 0.10 |
ENST00000454470.1
|
LINC00702
|
long intergenic non-protein coding RNA 702 |
| chr5_+_36606700 | 0.10 |
ENST00000416645.2
|
SLC1A3
|
solute carrier family 1 (glial high affinity glutamate transporter), member 3 |
| chr2_+_135596180 | 0.09 |
ENST00000283054.4
ENST00000392928.1 |
ACMSD
|
aminocarboxymuconate semialdehyde decarboxylase |
| chr7_+_37723336 | 0.09 |
ENST00000450180.1
|
GPR141
|
G protein-coupled receptor 141 |
| chr5_+_66300446 | 0.09 |
ENST00000261569.7
|
MAST4
|
microtubule associated serine/threonine kinase family member 4 |
| chr10_-_99205607 | 0.08 |
ENST00000477692.2
ENST00000485122.2 ENST00000370886.5 ENST00000370885.4 ENST00000370902.3 ENST00000370884.5 |
EXOSC1
|
exosome component 1 |
| chr7_-_99716940 | 0.07 |
ENST00000440225.1
|
TAF6
|
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
| chrX_+_107288280 | 0.07 |
ENST00000458383.1
|
VSIG1
|
V-set and immunoglobulin domain containing 1 |
| chr2_+_135596106 | 0.07 |
ENST00000356140.5
|
ACMSD
|
aminocarboxymuconate semialdehyde decarboxylase |
| chr10_-_72142345 | 0.07 |
ENST00000373224.1
ENST00000446961.1 ENST00000358141.2 ENST00000357631.2 |
LRRC20
|
leucine rich repeat containing 20 |
| chr1_+_117544366 | 0.06 |
ENST00000256652.4
ENST00000369470.1 |
CD101
|
CD101 molecule |
| chr11_-_102651343 | 0.06 |
ENST00000279441.4
ENST00000539681.1 |
MMP10
|
matrix metallopeptidase 10 (stromelysin 2) |
| chr7_-_99716952 | 0.05 |
ENST00000523306.1
ENST00000344095.4 ENST00000417349.1 ENST00000493322.1 ENST00000520135.1 ENST00000418432.2 ENST00000460673.2 ENST00000452041.1 ENST00000452438.2 ENST00000451699.1 ENST00000453269.2 |
TAF6
|
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
| chr11_+_101918153 | 0.05 |
ENST00000434758.2
ENST00000526781.1 ENST00000534360.1 |
C11orf70
|
chromosome 11 open reading frame 70 |
| chr19_+_11071546 | 0.05 |
ENST00000358026.2
|
SMARCA4
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 |
| chr10_-_4285923 | 0.05 |
ENST00000418372.1
ENST00000608792.1 |
LINC00702
|
long intergenic non-protein coding RNA 702 |
| chr3_-_99569821 | 0.05 |
ENST00000487087.1
|
FILIP1L
|
filamin A interacting protein 1-like |
| chr20_-_50418972 | 0.05 |
ENST00000395997.3
|
SALL4
|
spalt-like transcription factor 4 |
| chr5_+_66300464 | 0.05 |
ENST00000436277.1
|
MAST4
|
microtubule associated serine/threonine kinase family member 4 |
| chr5_+_176811431 | 0.04 |
ENST00000512593.1
ENST00000324417.5 |
SLC34A1
|
solute carrier family 34 (type II sodium/phosphate contransporter), member 1 |
| chr10_+_18549645 | 0.04 |
ENST00000396576.2
|
CACNB2
|
calcium channel, voltage-dependent, beta 2 subunit |
| chr2_+_11682790 | 0.04 |
ENST00000389825.3
ENST00000381483.2 |
GREB1
|
growth regulation by estrogen in breast cancer 1 |
| chr4_+_113568207 | 0.04 |
ENST00000511529.1
|
LARP7
|
La ribonucleoprotein domain family, member 7 |
| chr4_+_71019903 | 0.04 |
ENST00000344526.5
|
C4orf40
|
chromosome 4 open reading frame 40 |
| chr7_+_37723420 | 0.04 |
ENST00000476620.1
|
EPDR1
|
ependymin related 1 |
| chr19_+_50016610 | 0.04 |
ENST00000596975.1
|
FCGRT
|
Fc fragment of IgG, receptor, transporter, alpha |
| chr12_+_28410128 | 0.03 |
ENST00000381259.1
ENST00000381256.1 |
CCDC91
|
coiled-coil domain containing 91 |
| chr15_-_37393406 | 0.03 |
ENST00000338564.5
ENST00000558313.1 ENST00000340545.5 |
MEIS2
|
Meis homeobox 2 |
| chr22_+_24951949 | 0.03 |
ENST00000402849.1
|
SNRPD3
|
small nuclear ribonucleoprotein D3 polypeptide 18kDa |
| chr7_-_55620433 | 0.02 |
ENST00000418904.1
|
VOPP1
|
vesicular, overexpressed in cancer, prosurvival protein 1 |
| chr20_-_50418947 | 0.02 |
ENST00000371539.3
|
SALL4
|
spalt-like transcription factor 4 |
| chrX_+_43515467 | 0.02 |
ENST00000338702.3
ENST00000542639.1 |
MAOA
|
monoamine oxidase A |
| chr7_+_99717230 | 0.02 |
ENST00000262932.3
|
CNPY4
|
canopy FGF signaling regulator 4 |
| chr17_-_27418537 | 0.02 |
ENST00000408971.2
|
TIAF1
|
TGFB1-induced anti-apoptotic factor 1 |
| chr2_+_228736335 | 0.02 |
ENST00000440997.1
ENST00000545118.1 |
DAW1
|
dynein assembly factor with WDR repeat domains 1 |
| chr4_+_105828537 | 0.02 |
ENST00000515649.1
|
RP11-556I14.1
|
RP11-556I14.1 |
| chr3_+_111718173 | 0.02 |
ENST00000494932.1
|
TAGLN3
|
transgelin 3 |
| chr14_+_32798462 | 0.02 |
ENST00000280979.4
|
AKAP6
|
A kinase (PRKA) anchor protein 6 |
| chr15_+_63050785 | 0.02 |
ENST00000472902.1
|
TLN2
|
talin 2 |
| chr17_+_18086392 | 0.02 |
ENST00000541285.1
|
ALKBH5
|
alkB, alkylation repair homolog 5 (E. coli) |
| chr3_+_2933893 | 0.02 |
ENST00000397459.2
|
CNTN4
|
contactin 4 |
| chr4_-_150736962 | 0.02 |
ENST00000502345.1
ENST00000510975.1 ENST00000511993.1 |
RP11-526A4.1
|
RP11-526A4.1 |
| chr10_+_99205894 | 0.02 |
ENST00000370854.3
ENST00000393760.1 ENST00000414567.1 ENST00000370846.4 |
ZDHHC16
|
zinc finger, DHHC-type containing 16 |
| chr7_-_99717463 | 0.02 |
ENST00000437822.2
|
TAF6
|
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
| chr4_-_119759795 | 0.02 |
ENST00000419654.2
|
SEC24D
|
SEC24 family member D |
| chr11_+_65554493 | 0.02 |
ENST00000335987.3
|
OVOL1
|
ovo-like zinc finger 1 |
| chr14_+_74034310 | 0.02 |
ENST00000538782.1
|
ACOT2
|
acyl-CoA thioesterase 2 |
| chr11_+_47293795 | 0.02 |
ENST00000422579.1
|
MADD
|
MAP-kinase activating death domain |
| chr13_+_36050881 | 0.02 |
ENST00000537702.1
|
NBEA
|
neurobeachin |
| chr2_-_99871570 | 0.01 |
ENST00000333017.2
ENST00000409679.1 ENST00000423306.1 |
LYG2
|
lysozyme G-like 2 |
| chr14_+_57671888 | 0.01 |
ENST00000391612.1
|
AL391152.1
|
AL391152.1 |
| chr5_-_96478466 | 0.01 |
ENST00000274382.4
|
LIX1
|
Lix1 homolog (chicken) |
| chr20_+_43990576 | 0.01 |
ENST00000372727.1
ENST00000414310.1 |
SYS1
|
SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) |
| chr16_+_53133070 | 0.01 |
ENST00000565832.1
|
CHD9
|
chromodomain helicase DNA binding protein 9 |
| chr11_+_71900572 | 0.01 |
ENST00000312293.4
|
FOLR1
|
folate receptor 1 (adult) |
| chr5_+_148737562 | 0.01 |
ENST00000274569.4
|
PCYOX1L
|
prenylcysteine oxidase 1 like |
| chr8_+_92261516 | 0.01 |
ENST00000276609.3
ENST00000309536.2 |
SLC26A7
|
solute carrier family 26 (anion exchanger), member 7 |
| chr11_-_71823266 | 0.01 |
ENST00000538919.1
ENST00000539395.1 ENST00000542531.1 |
ANAPC15
|
anaphase promoting complex subunit 15 |
| chr3_-_101039402 | 0.01 |
ENST00000193391.7
|
IMPG2
|
interphotoreceptor matrix proteoglycan 2 |
| chrX_-_19504642 | 0.01 |
ENST00000469203.2
|
MAP3K15
|
mitogen-activated protein kinase kinase kinase 15 |
| chr2_+_191221240 | 0.01 |
ENST00000409027.1
ENST00000458193.1 |
INPP1
|
inositol polyphosphate-1-phosphatase |
| chrX_+_107288239 | 0.01 |
ENST00000217957.5
|
VSIG1
|
V-set and immunoglobulin domain containing 1 |
| chr13_+_78315348 | 0.01 |
ENST00000441784.1
|
SLAIN1
|
SLAIN motif family, member 1 |
| chr12_-_52761262 | 0.01 |
ENST00000257901.3
|
KRT85
|
keratin 85 |
| chr6_+_130742231 | 0.01 |
ENST00000545622.1
|
TMEM200A
|
transmembrane protein 200A |
| chr13_+_78315295 | 0.01 |
ENST00000351546.3
|
SLAIN1
|
SLAIN motif family, member 1 |
| chr12_+_15699286 | 0.01 |
ENST00000442921.2
ENST00000542557.1 ENST00000445537.2 ENST00000544244.1 |
PTPRO
|
protein tyrosine phosphatase, receptor type, O |
| chr14_+_56584414 | 0.01 |
ENST00000559044.1
|
PELI2
|
pellino E3 ubiquitin protein ligase family member 2 |
| chr11_+_71900703 | 0.01 |
ENST00000393681.2
|
FOLR1
|
folate receptor 1 (adult) |
| chr5_-_20575959 | 0.01 |
ENST00000507958.1
|
CDH18
|
cadherin 18, type 2 |
| chr10_+_99205959 | 0.00 |
ENST00000352634.4
ENST00000353979.3 ENST00000370842.2 ENST00000345745.5 |
ZDHHC16
|
zinc finger, DHHC-type containing 16 |
| chr4_-_138453606 | 0.00 |
ENST00000412923.2
ENST00000344876.4 ENST00000507846.1 ENST00000510305.1 |
PCDH18
|
protocadherin 18 |
| chr19_-_36001113 | 0.00 |
ENST00000434389.1
|
DMKN
|
dermokine |
| chr4_+_86748898 | 0.00 |
ENST00000509300.1
|
ARHGAP24
|
Rho GTPase activating protein 24 |
| chr19_-_3557570 | 0.00 |
ENST00000355415.2
|
MFSD12
|
major facilitator superfamily domain containing 12 |
| chr4_+_144312659 | 0.00 |
ENST00000509992.1
|
GAB1
|
GRB2-associated binding protein 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of HOXD1
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0019805 | quinolinate biosynthetic process(GO:0019805) |
| 0.0 | 0.0 | GO:0097187 | dentinogenesis(GO:0097187) regulation of sodium-dependent phosphate transport(GO:2000118) |
| 0.0 | 0.0 | GO:0002416 | IgG immunoglobulin transcytosis in epithelial cells mediated by FcRn immunoglobulin receptor(GO:0002416) |
| 0.0 | 0.1 | GO:0070777 | D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779) |
| 0.0 | 0.1 | GO:0007070 | negative regulation of transcription during mitosis(GO:0007068) negative regulation of transcription from RNA polymerase II promoter during mitosis(GO:0007070) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0000940 | condensed chromosome outer kinetochore(GO:0000940) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |