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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
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Results for UAAGACG
Z-value: 0.18
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miRNA associated with seed UAAGACG
| Name | miRBASE accession |
|---|---|
|
hsa-miR-208a-3p
|
MIMAT0000241 |
|
hsa-miR-208b-3p
|
MIMAT0004960 |
Activity profile of UAAGACG motif
Sorted Z-values of UAAGACG motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr2_-_68290106 | 0.07 |
ENST00000407324.1
ENST00000355848.3 ENST00000409302.1 ENST00000410067.3 |
C1D
|
C1D nuclear receptor corepressor |
| chr1_-_108507631 | 0.06 |
ENST00000527011.1
ENST00000370056.4 |
VAV3
|
vav 3 guanine nucleotide exchange factor |
| chr8_+_48920960 | 0.05 |
ENST00000523111.2
ENST00000523432.1 ENST00000521346.1 ENST00000517630.1 |
UBE2V2
|
ubiquitin-conjugating enzyme E2 variant 2 |
| chr4_+_103790120 | 0.05 |
ENST00000273986.4
|
CISD2
|
CDGSH iron sulfur domain 2 |
| chr10_+_112631547 | 0.04 |
ENST00000280154.7
ENST00000393104.2 |
PDCD4
|
programmed cell death 4 (neoplastic transformation inhibitor) |
| chr9_-_140196703 | 0.04 |
ENST00000356628.2
|
NRARP
|
NOTCH-regulated ankyrin repeat protein |
| chr10_+_98592009 | 0.03 |
ENST00000540664.1
ENST00000371103.3 |
LCOR
|
ligand dependent nuclear receptor corepressor |
| chr10_-_89577910 | 0.03 |
ENST00000308448.7
ENST00000541004.1 |
ATAD1
|
ATPase family, AAA domain containing 1 |
| chr1_+_145611010 | 0.03 |
ENST00000369291.5
|
RNF115
|
ring finger protein 115 |
| chr2_+_228029281 | 0.03 |
ENST00000396578.3
|
COL4A3
|
collagen, type IV, alpha 3 (Goodpasture antigen) |
| chr13_+_50571155 | 0.03 |
ENST00000420995.2
ENST00000378182.3 ENST00000356017.4 ENST00000457662.2 |
TRIM13
|
tripartite motif containing 13 |
| chr3_-_72496035 | 0.03 |
ENST00000477973.2
|
RYBP
|
RING1 and YY1 binding protein |
| chr9_-_72374848 | 0.03 |
ENST00000377200.5
ENST00000340434.4 ENST00000472967.2 |
PTAR1
|
protein prenyltransferase alpha subunit repeat containing 1 |
| chr12_-_42538657 | 0.03 |
ENST00000398675.3
|
GXYLT1
|
glucoside xylosyltransferase 1 |
| chr16_-_46655538 | 0.02 |
ENST00000303383.3
|
SHCBP1
|
SHC SH2-domain binding protein 1 |
| chr15_+_52311398 | 0.02 |
ENST00000261845.5
|
MAPK6
|
mitogen-activated protein kinase 6 |
| chr5_+_122110691 | 0.02 |
ENST00000379516.2
ENST00000505934.1 ENST00000514949.1 |
SNX2
|
sorting nexin 2 |
| chr5_-_79287060 | 0.02 |
ENST00000512560.1
ENST00000509852.1 ENST00000512528.1 |
MTX3
|
metaxin 3 |
| chr3_+_43328004 | 0.02 |
ENST00000454177.1
ENST00000429705.2 ENST00000296088.7 ENST00000437827.1 |
SNRK
|
SNF related kinase |
| chr1_+_97187318 | 0.02 |
ENST00000609116.1
ENST00000370198.1 ENST00000370197.1 ENST00000426398.2 ENST00000394184.3 |
PTBP2
|
polypyrimidine tract binding protein 2 |
| chr7_-_30029367 | 0.02 |
ENST00000242059.5
|
SCRN1
|
secernin 1 |
| chr17_-_36762095 | 0.02 |
ENST00000578925.1
ENST00000264659.7 |
SRCIN1
|
SRC kinase signaling inhibitor 1 |
| chr11_-_118047376 | 0.02 |
ENST00000278947.5
|
SCN2B
|
sodium channel, voltage-gated, type II, beta subunit |
| chr15_-_49338748 | 0.02 |
ENST00000559471.1
|
SECISBP2L
|
SECIS binding protein 2-like |
| chr5_+_129240151 | 0.02 |
ENST00000305031.4
|
CHSY3
|
chondroitin sulfate synthase 3 |
| chr8_+_17013515 | 0.02 |
ENST00000262096.8
|
ZDHHC2
|
zinc finger, DHHC-type containing 2 |
| chr5_-_131132614 | 0.02 |
ENST00000307968.7
ENST00000307954.8 |
FNIP1
|
folliculin interacting protein 1 |
| chrX_+_16737718 | 0.02 |
ENST00000380155.3
|
SYAP1
|
synapse associated protein 1 |
| chr2_+_120517174 | 0.02 |
ENST00000263708.2
|
PTPN4
|
protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) |
| chr14_-_35182994 | 0.02 |
ENST00000341223.3
|
CFL2
|
cofilin 2 (muscle) |
| chr5_+_112043186 | 0.02 |
ENST00000509732.1
ENST00000457016.1 ENST00000507379.1 |
APC
|
adenomatous polyposis coli |
| chr12_-_93323013 | 0.02 |
ENST00000322349.8
|
EEA1
|
early endosome antigen 1 |
| chr3_-_18466787 | 0.02 |
ENST00000338745.6
ENST00000450898.1 |
SATB1
|
SATB homeobox 1 |
| chr5_-_76788317 | 0.02 |
ENST00000296679.4
|
WDR41
|
WD repeat domain 41 |
| chr10_-_75255724 | 0.02 |
ENST00000342558.3
ENST00000360663.5 ENST00000394829.2 ENST00000394828.2 ENST00000394822.2 |
PPP3CB
|
protein phosphatase 3, catalytic subunit, beta isozyme |
| chr3_+_29322803 | 0.02 |
ENST00000396583.3
ENST00000383767.2 |
RBMS3
|
RNA binding motif, single stranded interacting protein 3 |
| chr3_+_186501336 | 0.02 |
ENST00000323963.5
ENST00000440191.2 ENST00000356531.5 |
EIF4A2
|
eukaryotic translation initiation factor 4A2 |
| chr6_+_37225540 | 0.02 |
ENST00000373491.3
|
TBC1D22B
|
TBC1 domain family, member 22B |
| chr10_+_63661053 | 0.02 |
ENST00000279873.7
|
ARID5B
|
AT rich interactive domain 5B (MRF1-like) |
| chr1_-_55680762 | 0.02 |
ENST00000407756.1
ENST00000294383.6 |
USP24
|
ubiquitin specific peptidase 24 |
| chr13_-_50367057 | 0.01 |
ENST00000261667.3
|
KPNA3
|
karyopherin alpha 3 (importin alpha 4) |
| chr1_+_110527308 | 0.01 |
ENST00000369799.5
|
AHCYL1
|
adenosylhomocysteinase-like 1 |
| chr14_-_50698276 | 0.01 |
ENST00000216373.5
|
SOS2
|
son of sevenless homolog 2 (Drosophila) |
| chr12_+_68042495 | 0.01 |
ENST00000344096.3
|
DYRK2
|
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 |
| chr15_+_57210818 | 0.01 |
ENST00000438423.2
ENST00000267811.5 ENST00000452095.2 ENST00000559609.1 ENST00000333725.5 |
TCF12
|
transcription factor 12 |
| chr1_+_36396677 | 0.01 |
ENST00000373191.4
ENST00000397828.2 |
AGO3
|
argonaute RISC catalytic component 3 |
| chr5_+_56469775 | 0.01 |
ENST00000424459.3
|
GPBP1
|
GC-rich promoter binding protein 1 |
| chr9_+_101867359 | 0.01 |
ENST00000374994.4
|
TGFBR1
|
transforming growth factor, beta receptor 1 |
| chr2_+_42396472 | 0.01 |
ENST00000318522.5
ENST00000402711.2 |
EML4
|
echinoderm microtubule associated protein like 4 |
| chr13_+_49550015 | 0.01 |
ENST00000492622.2
|
FNDC3A
|
fibronectin type III domain containing 3A |
| chr17_-_45266542 | 0.01 |
ENST00000531206.1
ENST00000527547.1 ENST00000446365.2 ENST00000575483.1 ENST00000066544.3 |
CDC27
|
cell division cycle 27 |
| chr8_+_38614807 | 0.01 |
ENST00000330691.6
ENST00000348567.4 |
TACC1
|
transforming, acidic coiled-coil containing protein 1 |
| chr15_+_44829255 | 0.01 |
ENST00000261868.5
ENST00000424492.3 |
EIF3J
|
eukaryotic translation initiation factor 3, subunit J |
| chr7_+_90225796 | 0.01 |
ENST00000380050.3
|
CDK14
|
cyclin-dependent kinase 14 |
| chr21_-_16437255 | 0.01 |
ENST00000400199.1
ENST00000400202.1 |
NRIP1
|
nuclear receptor interacting protein 1 |
| chr3_-_15374033 | 0.01 |
ENST00000253688.5
ENST00000383791.3 |
SH3BP5
|
SH3-domain binding protein 5 (BTK-associated) |
| chr14_-_105487381 | 0.01 |
ENST00000392590.3
ENST00000336219.3 |
CDCA4
|
cell division cycle associated 4 |
| chr6_+_133562472 | 0.01 |
ENST00000430974.2
ENST00000367895.5 ENST00000355167.3 ENST00000355286.6 |
EYA4
|
eyes absent homolog 4 (Drosophila) |
| chr10_-_27149792 | 0.01 |
ENST00000376140.3
ENST00000376170.4 |
ABI1
|
abl-interactor 1 |
| chr7_-_106301405 | 0.01 |
ENST00000523505.1
|
CCDC71L
|
coiled-coil domain containing 71-like |
| chr17_-_48785216 | 0.01 |
ENST00000285243.6
|
ANKRD40
|
ankyrin repeat domain 40 |
| chr17_-_8534067 | 0.01 |
ENST00000360416.3
ENST00000269243.4 |
MYH10
|
myosin, heavy chain 10, non-muscle |
| chr20_+_51588873 | 0.01 |
ENST00000371497.5
|
TSHZ2
|
teashirt zinc finger homeobox 2 |
| chr10_-_32345305 | 0.01 |
ENST00000302418.4
|
KIF5B
|
kinesin family member 5B |
| chr9_+_96793076 | 0.01 |
ENST00000375360.3
|
PTPDC1
|
protein tyrosine phosphatase domain containing 1 |
| chr13_-_107220455 | 0.01 |
ENST00000400198.3
|
ARGLU1
|
arginine and glutamate rich 1 |
| chr18_-_21977748 | 0.01 |
ENST00000399441.4
ENST00000319481.3 |
OSBPL1A
|
oxysterol binding protein-like 1A |
| chr6_+_163835669 | 0.01 |
ENST00000453779.2
ENST00000275262.7 ENST00000392127.2 ENST00000361752.3 |
QKI
|
QKI, KH domain containing, RNA binding |
| chr2_-_174830430 | 0.01 |
ENST00000310015.6
ENST00000455789.2 |
SP3
|
Sp3 transcription factor |
| chr17_+_29718642 | 0.01 |
ENST00000325874.8
|
RAB11FIP4
|
RAB11 family interacting protein 4 (class II) |
| chr12_-_12419703 | 0.01 |
ENST00000543091.1
ENST00000261349.4 |
LRP6
|
low density lipoprotein receptor-related protein 6 |
| chr12_+_72148614 | 0.01 |
ENST00000261263.3
|
RAB21
|
RAB21, member RAS oncogene family |
| chr11_-_86666427 | 0.00 |
ENST00000531380.1
|
FZD4
|
frizzled family receptor 4 |
| chr12_+_50135588 | 0.00 |
ENST00000423828.1
ENST00000550445.1 |
TMBIM6
|
transmembrane BAX inhibitor motif containing 6 |
| chrX_+_41192595 | 0.00 |
ENST00000399959.2
|
DDX3X
|
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked |
| chr3_-_71774516 | 0.00 |
ENST00000425534.3
|
EIF4E3
|
eukaryotic translation initiation factor 4E family member 3 |
| chr7_-_26240357 | 0.00 |
ENST00000354667.4
ENST00000356674.7 |
HNRNPA2B1
|
heterogeneous nuclear ribonucleoprotein A2/B1 |
| chr14_-_27066636 | 0.00 |
ENST00000267422.7
ENST00000344429.5 ENST00000574031.1 ENST00000465357.2 ENST00000547619.1 |
NOVA1
|
neuro-oncological ventral antigen 1 |
| chr15_+_101142722 | 0.00 |
ENST00000332783.7
ENST00000558747.1 ENST00000343276.4 |
ASB7
|
ankyrin repeat and SOCS box containing 7 |
| chr20_+_3451650 | 0.00 |
ENST00000262919.5
|
ATRN
|
attractin |
| chr1_-_205782304 | 0.00 |
ENST00000367137.3
|
SLC41A1
|
solute carrier family 41 (magnesium transporter), member 1 |
| chr14_-_61116168 | 0.00 |
ENST00000247182.6
|
SIX1
|
SIX homeobox 1 |
| chr1_-_16678914 | 0.00 |
ENST00000375592.3
|
FBXO42
|
F-box protein 42 |
| chr7_-_105029329 | 0.00 |
ENST00000393651.3
ENST00000460391.1 |
SRPK2
|
SRSF protein kinase 2 |
| chr17_+_38219063 | 0.00 |
ENST00000584985.1
ENST00000264637.4 ENST00000450525.2 |
THRA
|
thyroid hormone receptor, alpha |
| chr6_-_99797522 | 0.00 |
ENST00000389677.5
|
FAXC
|
failed axon connections homolog (Drosophila) |
| chr13_+_100258907 | 0.00 |
ENST00000376355.3
ENST00000376360.1 ENST00000444838.2 ENST00000376354.1 ENST00000339105.4 |
CLYBL
|
citrate lyase beta like |
| chr5_-_114880533 | 0.00 |
ENST00000274457.3
|
FEM1C
|
fem-1 homolog c (C. elegans) |
| chr1_+_19923454 | 0.00 |
ENST00000602662.1
ENST00000602293.1 ENST00000322753.6 |
MINOS1-NBL1
MINOS1
|
MINOS1-NBL1 readthrough mitochondrial inner membrane organizing system 1 |
| chr2_-_208030647 | 0.00 |
ENST00000309446.6
|
KLF7
|
Kruppel-like factor 7 (ubiquitous) |
Network of associatons between targets according to the STRING database.
First level regulatory network of UAAGACG
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.0 | GO:1904761 | negative regulation of myofibroblast differentiation(GO:1904761) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0031372 | UBC13-MMS2 complex(GO:0031372) |