Motif ID: Hoxa13

Z-value: 0.702


Transcription factors associated with Hoxa13:

Gene SymbolEntrez IDGene Name
Hoxa13 ENSMUSG00000038203.12 Hoxa13



Activity profile for motif Hoxa13.

activity profile for motif Hoxa13


Sorted Z-values histogram for motif Hoxa13

Sorted Z-values for motif Hoxa13



Network of associatons between targets according to the STRING database.



First level regulatory network of Hoxa13

PNG image of the network

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Top targets:


Showing 1 to 20 of 200 entries
PromoterScoreRefseqGene SymbolGene Name
chr19_+_44493472 6.473 ENSMUST00000041163.4
 Wnt8b
wingless related MMTV integration site 8b
chr5_-_28467093 4.753 ENSMUST00000002708.3
 Shh
sonic hedgehog
chr11_+_120948480 4.627 ENSMUST00000070653.6
 Slc16a3
solute carrier family 16 (monocarboxylic acid transporters), member 3
chrY_-_1286563 4.468 ENSMUST00000091190.5
 Ddx3y
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
chr16_-_26989974 3.946 ENSMUST00000089832.4
 Gmnc
geminin coiled-coil domain containing
chrY_+_897782 3.384 ENSMUST00000055032.7
 Kdm5d
lysine (K)-specific demethylase 5D
chr12_-_54986328 3.345 ENSMUST00000038926.6
 Baz1a
bromodomain adjacent to zinc finger domain 1A
chr5_+_139543889 3.227 ENSMUST00000174792.1
ENSMUST00000031523.8
 Uncx

UNC homeobox

chr12_-_54986363 3.112 ENSMUST00000173433.1
ENSMUST00000173803.1
 Baz1a
Gm20403
bromodomain adjacent to zinc finger domain 1A
predicted gene 20403
chr5_+_92809372 2.947 ENSMUST00000113054.2
 Shroom3
shroom family member 3
chr2_-_18048784 2.907 ENSMUST00000142856.1
 Skida1
SKI/DACH domain containing 1
chr16_-_22161450 2.850 ENSMUST00000115379.1
 Igf2bp2
insulin-like growth factor 2 mRNA binding protein 2
chr13_-_3893556 2.718 ENSMUST00000099946.4
 Net1
neuroepithelial cell transforming gene 1
chr10_+_26229707 2.600 ENSMUST00000060716.5
ENSMUST00000164660.1
 Samd3

sterile alpha motif domain containing 3

chr10_-_116972609 2.584 ENSMUST00000092165.4
 Gm10271
predicted gene 10271
chr3_-_154330543 2.479 ENSMUST00000184966.1
ENSMUST00000177846.2
 Lhx8

LIM homeobox protein 8

chr1_-_138847579 2.389 ENSMUST00000093486.3
ENSMUST00000046870.6
 Lhx9

LIM homeobox protein 9

chr10_+_93831555 2.377 ENSMUST00000095333.4
 Usp44
ubiquitin specific peptidase 44
chr9_-_114781986 2.287 ENSMUST00000035009.8
ENSMUST00000084867.7
 Cmtm7

CKLF-like MARVEL transmembrane domain containing 7

chr4_-_92191749 2.275 ENSMUST00000123179.1
 Gm12666
predicted gene 12666

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 178 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 6.7 GO:0006261 DNA-dependent DNA replication(GO:0006261)
0.0 5.8 GO:0016055 Wnt signaling pathway(GO:0016055) cell-cell signaling by wnt(GO:0198738)
0.1 5.3 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.3 5.1 GO:0035873 lactate transport(GO:0015727) lactate transmembrane transport(GO:0035873) plasma membrane lactate transport(GO:0035879)
1.6 4.8 GO:0060769 positive regulation of epithelial cell proliferation involved in prostate gland development(GO:0060769) kidney smooth muscle tissue development(GO:0072194) negative regulation of dopaminergic neuron differentiation(GO:1904339)
0.9 3.7 GO:0035606 peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.3 3.6 GO:1903504 regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) regulation of mitotic spindle checkpoint(GO:1903504)
0.9 3.5 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 3.5 GO:0006270 DNA replication initiation(GO:0006270)
0.7 3.4 GO:0002457 T cell antigen processing and presentation(GO:0002457)
0.4 3.2 GO:0035726 common myeloid progenitor cell proliferation(GO:0035726)
0.2 3.0 GO:0034643 establishment of mitochondrion localization, microtubule-mediated(GO:0034643) mitochondrion transport along microtubule(GO:0047497)
0.2 2.7 GO:0051451 myoblast migration(GO:0051451)
0.7 2.6 GO:0000707 meiotic DNA recombinase assembly(GO:0000707)
0.2 2.6 GO:0090308 regulation of methylation-dependent chromatin silencing(GO:0090308)
0.6 2.4 GO:0090324 negative regulation of oxidative phosphorylation(GO:0090324)
0.5 2.4 GO:0035262 gonad morphogenesis(GO:0035262)
0.6 2.3 GO:0002337 B-1a B cell differentiation(GO:0002337)
0.1 2.3 GO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339)
0.7 2.2 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)

Gene overrepresentation in cellular_component category:

Showing 1 to 20 of 80 entries
Log-likelihood per target Total log-likelihoodTermDescription
1.3 6.5 GO:0008623 CHRAC(GO:0008623)
0.1 6.5 GO:0016363 nuclear matrix(GO:0016363)
0.0 5.6 GO:0036464 cytoplasmic ribonucleoprotein granule(GO:0036464)
0.0 4.4 GO:0005578 proteinaceous extracellular matrix(GO:0005578)
0.5 3.7 GO:0097452 GAIT complex(GO:0097452)
0.0 3.7 GO:0043296 apical junction complex(GO:0043296)
0.3 3.0 GO:0031080 nuclear pore outer ring(GO:0031080)
0.1 3.0 GO:0031307 integral component of mitochondrial outer membrane(GO:0031307)
0.0 2.7 GO:0016323 basolateral plasma membrane(GO:0016323)
0.5 2.6 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.2 2.6 GO:0097431 mitotic spindle pole(GO:0097431)
0.4 2.5 GO:0001674 female germ cell nucleus(GO:0001674)
0.0 2.5 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.0 2.5 GO:0005813 centrosome(GO:0005813)
0.0 2.4 GO:0016459 myosin complex(GO:0016459)
0.2 2.3 GO:0031616 spindle pole centrosome(GO:0031616)
0.7 2.2 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.6 2.2 GO:0090537 CERF complex(GO:0090537)
0.0 2.2 GO:0005844 polysome(GO:0005844)
0.0 2.0 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)

Gene overrepresentation in molecular_function category:

Showing 1 to 20 of 135 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.2 6.2 GO:0005109 frizzled binding(GO:0005109)
0.3 5.1 GO:0015129 lactate transmembrane transporter activity(GO:0015129)
1.0 4.8 GO:0005113 patched binding(GO:0005113)
0.1 4.5 GO:0008186 ATP-dependent RNA helicase activity(GO:0004004) RNA-dependent ATPase activity(GO:0008186)
1.2 3.7 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.9 3.5 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.5 3.4 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453)
0.0 3.4 GO:0101005 thiol-dependent ubiquitinyl hydrolase activity(GO:0036459) ubiquitinyl hydrolase activity(GO:0101005)
0.2 3.2 GO:0005247 voltage-gated chloride channel activity(GO:0005247)
0.1 3.0 GO:0005487 nucleocytoplasmic transporter activity(GO:0005487)
0.2 2.9 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.0 2.9 GO:0004721 phosphoprotein phosphatase activity(GO:0004721)
0.1 2.8 GO:0004653 polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653)
0.1 2.7 GO:0017049 GTP-Rho binding(GO:0017049)
0.9 2.6 GO:0044729 hemi-methylated DNA-binding(GO:0044729)
0.4 2.6 GO:0000150 recombinase activity(GO:0000150)
0.3 2.2 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 2.2 GO:0016805 dipeptidase activity(GO:0016805)
0.1 2.1 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 2.0 GO:0001106 RNA polymerase II transcription corepressor activity(GO:0001106)