Motif ID: Hoxa3

Z-value: 0.540


Transcription factors associated with Hoxa3:

Gene SymbolEntrez IDGene Name
Hoxa3 ENSMUSG00000079560.7 Hoxa3



Activity profile for motif Hoxa3.

activity profile for motif Hoxa3


Sorted Z-values histogram for motif Hoxa3

Sorted Z-values for motif Hoxa3



Network of associatons between targets according to the STRING database.



First level regulatory network of Hoxa3

PNG image of the network

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Top targets:


Showing 1 to 20 of 29 entries
PromoterScoreRefseqGene SymbolGene Name
chr3_+_55782500 5.596 ENSMUST00000075422.4
 Mab21l1
mab-21-like 1 (C. elegans)
chr2_-_168767136 5.485 ENSMUST00000029061.5
ENSMUST00000103074.1
 Sall4

sal-like 4 (Drosophila)

chr17_-_70853482 5.094 ENSMUST00000118283.1
 Tgif1
TGFB-induced factor homeobox 1
chr9_+_119063429 4.354 ENSMUST00000141185.1
ENSMUST00000126251.1
ENSMUST00000136561.1
 Vill


villin-like


chr2_-_168767029 4.105 ENSMUST00000075044.3
 Sall4
sal-like 4 (Drosophila)
chr2_+_109917639 2.946 ENSMUST00000046548.7
ENSMUST00000111037.2
 Lgr4

leucine-rich repeat-containing G protein-coupled receptor 4

chr3_+_159839729 2.625 ENSMUST00000068952.5
 Wls
wntless homolog (Drosophila)
chr13_-_102905740 2.606 ENSMUST00000167462.1
 Mast4
microtubule associated serine/threonine kinase family member 4
chr13_-_102906046 2.457 ENSMUST00000171791.1
 Mast4
microtubule associated serine/threonine kinase family member 4
chr3_-_86548268 2.424 ENSMUST00000077524.3
 Mab21l2
mab-21-like 2 (C. elegans)
chr10_+_37139558 1.646 ENSMUST00000062667.3
 5930403N24Rik
RIKEN cDNA 5930403N24 gene
chr12_+_59013379 1.244 ENSMUST00000021379.7
 Gemin2
gem (nuclear organelle) associated protein 2
chr10_-_37138863 1.198 ENSMUST00000092584.5
 Marcks
myristoylated alanine rich protein kinase C substrate
chr17_+_17402672 1.106 ENSMUST00000115576.2
 Lix1
limb expression 1 homolog (chicken)
chr5_+_138187485 0.943 ENSMUST00000110934.2
 Cnpy4
canopy 4 homolog (zebrafish)
chr5_-_138187177 0.847 ENSMUST00000110937.1
ENSMUST00000139276.1
ENSMUST00000048698.7
ENSMUST00000123415.1
 Taf6



TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor



chr10_+_26772477 0.818 ENSMUST00000039557.7
 Arhgap18
Rho GTPase activating protein 18
chr1_-_172027269 0.807 ENSMUST00000027837.6
ENSMUST00000111264.1
 Vangl2

vang-like 2 (van gogh, Drosophila)

chr14_+_79515618 0.618 ENSMUST00000110835.1
 Elf1
E74-like factor 1
chr7_-_38019505 0.611 ENSMUST00000085513.4
 Uri1
URI1, prefoldin-like chaperone

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 15 of 15 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.5 9.6 GO:0001833 inner cell mass cell proliferation(GO:0001833)
0.0 5.4 GO:0043010 camera-type eye development(GO:0043010)
0.3 5.1 GO:0048387 negative regulation of retinoic acid receptor signaling pathway(GO:0048387)
0.1 4.4 GO:0051693 actin filament capping(GO:0051693)
1.0 2.9 GO:0072204 cell-cell signaling involved in kidney development(GO:0060995) Wnt signaling pathway involved in kidney development(GO:0061289) canonical Wnt signaling pathway involved in metanephric kidney development(GO:0061290) cell-cell signaling involved in metanephros development(GO:0072204)
0.2 2.6 GO:0031017 exocrine pancreas development(GO:0031017)
0.1 2.4 GO:0010172 embryonic body morphogenesis(GO:0010172)
0.0 1.2 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 1.1 GO:0097352 autophagosome maturation(GO:0097352)
0.3 0.9 GO:0060489 establishment of body hair or bristle planar orientation(GO:0048104) establishment of body hair planar orientation(GO:0048105) orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490)
0.0 0.8 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 0.6 GO:0050860 negative regulation of T cell receptor signaling pathway(GO:0050860)
0.1 0.3 GO:0035633 maintenance of blood-brain barrier(GO:0035633)
0.0 0.2 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0 0.1 GO:0072531 pyrimidine-containing compound transmembrane transport(GO:0072531)

Gene overrepresentation in cellular_component category:

Showing 1 to 7 of 7 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 9.6 GO:0000792 heterochromatin(GO:0000792)
0.1 2.6 GO:0032839 dendrite cytoplasm(GO:0032839)
0.4 1.2 GO:0042585 germinal vesicle(GO:0042585)
0.1 1.2 GO:0032797 SMN complex(GO:0032797)
0.2 0.9 GO:0060187 cell pole(GO:0060187)
0.0 0.8 GO:0033276 transcription factor TFTC complex(GO:0033276)
0.0 0.6 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)

Gene overrepresentation in molecular_function category:

Showing 1 to 8 of 8 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 10.5 GO:0044212 transcription regulatory region DNA binding(GO:0044212)
0.2 5.1 GO:0070410 co-SMAD binding(GO:0070410)
0.0 5.1 GO:0000287 magnesium ion binding(GO:0000287)
0.2 2.9 GO:0016500 protein-hormone receptor activity(GO:0016500)
0.3 2.6 GO:0031852 mu-type opioid receptor binding(GO:0031852)
0.0 1.2 GO:0005080 protein kinase C binding(GO:0005080)
0.0 0.6 GO:0001106 RNA polymerase II transcription corepressor activity(GO:0001106)
0.0 0.1 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)