Motif ID: Lhx2_Hoxc5
Z-value: 0.540


Transcription factors associated with Lhx2_Hoxc5:
Gene Symbol | Entrez ID | Gene Name |
---|---|---|
Hoxc5 | ENSMUSG00000022485.3 | Hoxc5 |
Lhx2 | ENSMUSG00000000247.5 | Lhx2 |
Activity-expression correlation:
Gene Symbol | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Lhx2 | mm10_v2_chr2_+_38341068_38341092 | -0.41 | 1.4e-03 | Click! |
Top targets:
Showing 1 to 20 of 200 entries
Gene overrepresentation in biological_process category:
Showing 1 to 20 of 187 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.4 | GO:0006412 | translation(GO:0006412) |
0.2 | 2.9 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.2 | 2.6 | GO:0006268 | DNA unwinding involved in DNA replication(GO:0006268) |
0.1 | 2.2 | GO:0015985 | energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986) |
0.0 | 2.2 | GO:0009060 | aerobic respiration(GO:0009060) |
0.1 | 2.0 | GO:0003417 | growth plate cartilage development(GO:0003417) |
0.6 | 1.7 | GO:0002940 | tRNA N2-guanine methylation(GO:0002940) |
0.0 | 1.7 | GO:0048821 | erythrocyte development(GO:0048821) |
0.5 | 1.6 | GO:0072204 | cell-cell signaling involved in kidney development(GO:0060995) Wnt signaling pathway involved in kidney development(GO:0061289) canonical Wnt signaling pathway involved in metanephric kidney development(GO:0061290) cell-cell signaling involved in metanephros development(GO:0072204) |
0.1 | 1.6 | GO:2000353 | positive regulation of endothelial cell apoptotic process(GO:2000353) |
0.0 | 1.6 | GO:0030490 | maturation of SSU-rRNA(GO:0030490) |
0.2 | 1.5 | GO:0019532 | oxalate transport(GO:0019532) |
0.2 | 1.5 | GO:0033353 | S-adenosylmethionine cycle(GO:0033353) |
0.1 | 1.3 | GO:0019800 | peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800) |
0.1 | 1.1 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.0 | 1.1 | GO:0006414 | translational elongation(GO:0006414) |
0.0 | 1.1 | GO:0016574 | histone ubiquitination(GO:0016574) |
0.3 | 1.0 | GO:2000564 | CD8-positive, alpha-beta T cell proliferation(GO:0035740) regulation of CD8-positive, alpha-beta T cell proliferation(GO:2000564) positive regulation of CD8-positive, alpha-beta T cell activation(GO:2001187) |
0.2 | 1.0 | GO:0016255 | attachment of GPI anchor to protein(GO:0016255) |
0.0 | 1.0 | GO:0034063 | stress granule assembly(GO:0034063) |
Gene overrepresentation in cellular_component category:
Showing 1 to 20 of 101 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.9 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.1 | 3.2 | GO:0000315 | organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762) |
0.0 | 3.1 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.0 | 2.8 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.2 | 2.6 | GO:0042555 | MCM complex(GO:0042555) |
0.0 | 2.1 | GO:0005581 | collagen trimer(GO:0005581) |
0.5 | 2.0 | GO:0005594 | collagen type IX trimer(GO:0005594) |
0.2 | 2.0 | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276) |
0.0 | 1.9 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.4 | 1.7 | GO:0031838 | haptoglobin-hemoglobin complex(GO:0031838) |
0.0 | 1.7 | GO:0070469 | respiratory chain(GO:0070469) |
0.0 | 1.3 | GO:0000792 | heterochromatin(GO:0000792) |
0.1 | 1.2 | GO:0071598 | neuronal ribonucleoprotein granule(GO:0071598) |
0.1 | 1.1 | GO:0031083 | BLOC-1 complex(GO:0031083) |
0.2 | 1.0 | GO:0042765 | GPI-anchor transamidase complex(GO:0042765) |
0.1 | 1.0 | GO:0042612 | MHC class I protein complex(GO:0042612) |
0.2 | 0.9 | GO:0070826 | paraferritin complex(GO:0070826) |
0.1 | 0.9 | GO:0001739 | sex chromatin(GO:0001739) |
0.1 | 0.9 | GO:0016272 | prefoldin complex(GO:0016272) |
0.2 | 0.8 | GO:0070022 | transforming growth factor beta receptor homodimeric complex(GO:0070022) |
Gene overrepresentation in molecular_function category:
Showing 1 to 20 of 140 entries
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.9 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.0 | 3.9 | GO:0003697 | single-stranded DNA binding(GO:0003697) |
0.2 | 2.6 | GO:0015106 | bicarbonate transmembrane transporter activity(GO:0015106) |
0.1 | 2.6 | GO:0016676 | cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676) |
0.3 | 2.0 | GO:1990932 | 5.8S rRNA binding(GO:1990932) |
0.0 | 2.0 | GO:0000049 | tRNA binding(GO:0000049) |
0.4 | 1.7 | GO:0031720 | haptoglobin binding(GO:0031720) |
0.1 | 1.7 | GO:0016500 | protein-hormone receptor activity(GO:0016500) |
0.2 | 1.5 | GO:0004013 | adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802) |
0.1 | 1.3 | GO:0004774 | succinate-CoA ligase activity(GO:0004774) |
0.0 | 1.3 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 1.3 | GO:0043021 | ribonucleoprotein complex binding(GO:0043021) |
0.1 | 1.2 | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism(GO:0046933) |
0.0 | 1.2 | GO:0003746 | translation elongation factor activity(GO:0003746) |
0.1 | 1.0 | GO:0046703 | natural killer cell lectin-like receptor binding(GO:0046703) |
0.2 | 0.9 | GO:0015086 | cadmium ion transmembrane transporter activity(GO:0015086) lead ion transmembrane transporter activity(GO:0015094) vanadium ion transmembrane transporter activity(GO:0015100) ferrous iron uptake transmembrane transporter activity(GO:0015639) |
0.1 | 0.9 | GO:0097157 | pre-mRNA intronic binding(GO:0097157) |
0.0 | 0.9 | GO:0003743 | translation initiation factor activity(GO:0003743) |
0.0 | 0.9 | GO:0003705 | transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0003705) |
0.0 | 0.9 | GO:0051082 | unfolded protein binding(GO:0051082) |