Motif ID: Pax1_Pax9

Z-value: 0.292

Transcription factors associated with Pax1_Pax9:

Gene SymbolEntrez IDGene Name
Pax1 ENSMUSG00000037034.9 Pax1
Pax9 ENSMUSG00000001497.12 Pax9



Activity profile for motif Pax1_Pax9.

activity profile for motif Pax1_Pax9


Sorted Z-values histogram for motif Pax1_Pax9

Sorted Z-values for motif Pax1_Pax9



Network of associatons between targets according to the STRING database.



First level regulatory network of Pax1_Pax9

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr2_-_36105271 2.806 ENSMUST00000112960.1
ENSMUST00000112967.5
ENSMUST00000112963.1
 Lhx6


LIM homeobox protein 6


chr12_-_90969768 2.175 ENSMUST00000181184.1
 4930544I03Rik
RIKEN cDNA 4930544I03 gene
chr2_+_178193075 1.611 ENSMUST00000103065.1
 Phactr3
phosphatase and actin regulator 3
chr18_+_69344503 0.964 ENSMUST00000114985.3
 Tcf4
transcription factor 4
chr15_-_84105662 0.959 ENSMUST00000082365.5
 Sult4a1
sulfotransferase family 4A, member 1
chr17_-_24205514 0.556 ENSMUST00000097376.3
ENSMUST00000168410.2
ENSMUST00000167791.2
ENSMUST00000040474.7
 Tbc1d24



TBC1 domain family, member 24



chr19_-_7105729 0.554 ENSMUST00000113383.2
 Flrt1
fibronectin leucine rich transmembrane protein 1
chr3_-_117360876 0.508 ENSMUST00000061071.8
 D3Bwg0562e
DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
chr4_-_110286581 0.482 ENSMUST00000138972.1
 Elavl4
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
chr5_-_93206428 0.411 ENSMUST00000144514.1
 Ccni
cyclin I
chrX_+_86191764 0.365 ENSMUST00000026036.4
 Nr0b1
nuclear receptor subfamily 0, group B, member 1
chr2_+_84734050 0.344 ENSMUST00000090729.2
 Ypel4
yippee-like 4 (Drosophila)
chr9_-_97111117 0.332 ENSMUST00000085206.4
 Slc25a36
solute carrier family 25, member 36
chr17_+_27909337 0.315 ENSMUST00000114842.1
ENSMUST00000025058.7
ENSMUST00000088027.5
 Anks1


ankyrin repeat and SAM domain containing 1


chr13_-_62777089 0.295 ENSMUST00000167516.2
 Gm5141
predicted gene 5141
chr11_+_83753689 0.283 ENSMUST00000001002.7
 Heatr6
HEAT repeat containing 6
chr19_+_8840519 0.225 ENSMUST00000086058.6
 Bscl2
Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
chr2_-_33468493 0.222 ENSMUST00000113156.1
ENSMUST00000028125.5
ENSMUST00000126442.1
 Zbtb43


zinc finger and BTB domain containing 43


chr13_-_62607499 0.166 ENSMUST00000091563.4
 6720489N17Rik
RIKEN cDNA 6720489N17 gene
chr5_-_93206489 0.149 ENSMUST00000058550.8
 Ccni
cyclin I
chr13_-_62520451 0.143 ENSMUST00000082203.6
ENSMUST00000101547.4
 Zfp934

zinc finger protein 934

chr7_-_24299310 0.128 ENSMUST00000145131.1
 Zfp61
zinc finger protein 61
chr9_+_21337828 0.092 ENSMUST00000034697.7
 Slc44a2
solute carrier family 44, member 2
chr5_+_112255813 0.014 ENSMUST00000031286.6
ENSMUST00000131673.1
ENSMUST00000112375.1
 Crybb1


crystallin, beta B1



Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.8 GO:1904936 cerebral cortex GABAergic interneuron migration(GO:0021853) interneuron migration(GO:1904936)
0.1 1.0 GO:0042118 endothelial cell activation(GO:0042118)
0.1 0.3 GO:1901187 regulation of ephrin receptor signaling pathway(GO:1901187)
0.1 0.4 GO:0035902 response to immobilization stress(GO:0035902)
0.0 0.3 GO:0006862 nucleotide transport(GO:0006862)
0.0 0.2 GO:0034389 lipid particle organization(GO:0034389)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 GO:0042788 polysomal ribosome(GO:0042788)
0.0 0.6 GO:0032809 neuronal cell body membrane(GO:0032809)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.1 1.6 GO:0008599 protein phosphatase type 1 regulator activity(GO:0008599)
0.0 1.0 GO:0034930 N-acetylglucosamine 6-O-sulfotransferase activity(GO:0001517) heparan sulfate 2-O-sulfotransferase activity(GO:0004394) HNK-1 sulfotransferase activity(GO:0016232) heparan sulfate 6-O-sulfotransferase activity(GO:0017095) trans-9R,10R-dihydrodiolphenanthrene sulfotransferase activity(GO:0018721) 1-phenanthrol sulfotransferase activity(GO:0018722) 3-phenanthrol sulfotransferase activity(GO:0018723) 4-phenanthrol sulfotransferase activity(GO:0018724) trans-3,4-dihydrodiolphenanthrene sulfotransferase activity(GO:0018725) 9-phenanthrol sulfotransferase activity(GO:0018726) 2-phenanthrol sulfotransferase activity(GO:0018727) phenanthrol sulfotransferase activity(GO:0019111) 1-hydroxypyrene sulfotransferase activity(GO:0034930) proteoglycan sulfotransferase activity(GO:0050698) cholesterol sulfotransferase activity(GO:0051922) hydroxyjasmonate sulfotransferase activity(GO:0080131)
0.0 0.6 GO:0005104 fibroblast growth factor receptor binding(GO:0005104)
0.0 0.3 GO:0015215 nucleotide transmembrane transporter activity(GO:0015215)
0.0 0.5 GO:0017091 AU-rich element binding(GO:0017091)
0.0 0.4 GO:0000217 DNA secondary structure binding(GO:0000217)
0.0 0.6 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)