mm10_v2_chr7_-_144939823_144939869	1.13217	Clock	ENSMUST00000093962.4|Ccnd1|ENSMUSG00000070348.4|cyclin D1
mm10_v2_chr14_-_20181773_20181790	1.12447	Clock	ENSMUST00000024011.8|Kcnk5|ENSMUSG00000023243.8|potassium channel, subfamily K, member 5
mm10_v2_chr15_+_72913357_72913357	1.04056	Clock	ENSMUST00000166418.2|Gm3150|ENSMUSG00000096173.1|predicted gene 3150
mm10_v2_chrX_+_36328353_36328418	1.03639	Clock	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr16_+_32608973_32608990	0.937543	Clock	ENSMUST00000120680.1|Tfrc|ENSMUSG00000022797.9|transferrin receptor
mm10_v2_chr1_-_186705980_186705999	0.881252	Clock	ENSMUST00000045288.8|Tgfb2|ENSMUSG00000039239.9|transforming growth factor, beta 2
mm10_v2_chr4_-_82705735_82705754	0.834615	Clock	ENSMUST00000155821.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr2_+_164769892_164769903	0.827159	Clock	ENSMUST00000088248.6|Ube2c|ENSMUSG00000001403.7|ubiquitin-conjugating enzyme E2C 	ENSMUST00000001439.6|Ube2c|ENSMUSG00000001403.7|ubiquitin-conjugating enzyme E2C
mm10_v2_chr1_-_82291370_82291416	0.798086	Clock	ENSMUST00000069799.2|Irs1|ENSMUSG00000055980.2|insulin receptor substrate 1
mm10_v2_chr4_-_97778042_97778071	0.7976	Clock	ENSMUST00000146447.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr5_-_76951560_76951589	0.7321	Clock	ENSMUST00000140076.1|Ppat|ENSMUSG00000029246.8|phosphoribosyl pyrophosphate amidotransferase
mm10_v2_chr10_+_22158566_22158586	0.726112	Clock	ENSMUST00000181645.1|Raet1e|ENSMUSG00000053219.9|retinoic acid early transcript 1E 	ENSMUST00000105522.2|H60b|ENSMUSG00000075297.4|histocompatibility 60b
mm10_v2_chr3_+_41564880_41564933	0.639767	Clock	ENSMUST00000168086.1|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr6_+_108660772_108660874	0.630657	Clock	ENSMUST00000163617.1|Bhlhe40|ENSMUSG00000030103.5|basic helix-loop-helix family, member e40
mm10_v2_chr1_+_59684949_59685023	0.621923	Clock	ENSMUST00000027174.3|Nop58|ENSMUSG00000026020.3|NOP58 ribonucleoprotein
mm10_v2_chr2_+_160645881_160645896	0.609715	Clock	ENSMUST00000109468.2|Top1|ENSMUSG00000070544.6|topoisomerase (DNA) I
mm10_v2_chr6_+_108660616_108660682	0.600486	Clock	ENSMUST00000032194.4|Bhlhe40|ENSMUSG00000030103.5|basic helix-loop-helix family, member e40
mm10_v2_chr17_-_35000848_35000958	0.597734	Clock	ENSMUST00000166828.3|D17H6S56E-5|ENSMUSG00000091747.3|DNA segment, Chr 17, human D6S56E 5
mm10_v2_chr18_+_35553401_35553421	0.572002	Clock	ENSMUST00000181664.1|Snhg4|ENSMUSG00000097769.1|small nucleolar RNA host gene 4 (non-protein coding)
mm10_v2_chr5_+_93093428_93093457	0.569621	Clock	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr4_-_97584612_97584643	0.563102	Clock	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr12_+_59131286_59131469	0.554184	Clock	ENSMUST00000176464.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000170992.2|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000176322.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr4_-_97584605_97584610	0.550853	Clock	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr15_-_10714612_10714637	0.549782	Clock	ENSMUST00000169385.1|Rai14|ENSMUSG00000022246.7|retinoic acid induced 14
mm10_v2_chr5_+_146231211_146231385	0.526853	Clock	ENSMUST00000161181.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000161652.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000031640.8|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000159467.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8
mm10_v2_chr16_+_43889936_43889947	0.524501	Clock	ENSMUST00000151183.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr12_+_59131473_59131502	0.503653	Clock	ENSMUST00000177162.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr8_+_90828820_90828842	0.486279	Clock	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr4_+_97777780_97777834	0.485798	Clock	ENSMUST00000107062.2|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000052018.5|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000107057.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr16_+_43889896_43889930	0.481535	Clock	ENSMUST00000122014.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene 	ENSMUST00000178400.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr17_-_35000746_35000801	0.477231	Clock	ENSMUST00000163360.1|D17H6S56E-5|ENSMUSG00000091747.3|DNA segment, Chr 17, human D6S56E 5
mm10_v2_chrX_+_56786527_56786564	0.465518	Clock	ENSMUST00000144600.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr7_-_25250720_25250761	0.459727	Clock	ENSMUST00000116343.2|Erf|ENSMUSG00000040857.9|Ets2 repressor factor 	ENSMUST00000045847.8|Erf|ENSMUSG00000040857.9|Ets2 repressor factor
mm10_v2_chr1_-_75219245_75219262	0.454093	Clock	ENSMUST00000079464.6|Tuba4a|ENSMUSG00000026202.7|tubulin, alpha 4A
mm10_v2_chr17_-_90455872_90456026	0.439566	Clock	ENSMUST00000174337.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000172466.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr12_-_90738438_90738438	0.439292	Clock	ENSMUST00000082432.3|Dio2|ENSMUSG00000007682.5|deiodinase, iodothyronine, type II
mm10_v2_chr9_+_95637601_95637632	0.422858	Clock	ENSMUST00000015498.8|Pcolce2|ENSMUSG00000015354.8|procollagen C-endopeptidase enhancer 2
mm10_v2_chr13_-_75943812_75943950	0.419159	Clock	ENSMUST00000022078.5|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3 	ENSMUST00000109606.1|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3
mm10_v2_chr16_-_43889669_43889685	0.417528	Clock	ENSMUST00000023387.7|Qtrtd1|ENSMUSG00000022704.9|queuine tRNA-ribosyltransferase domain containing 1
mm10_v2_chr16_+_43889800_43889820	0.416015	Clock	ENSMUST00000132859.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr2_+_83644435_83644490	0.401579	Clock	ENSMUST00000081591.6|Zc3h15|ENSMUSG00000027091.8|zinc finger CCCH-type containing 15
mm10_v2_chr11_-_51756378_51756618	0.3923	Clock	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
mm10_v2_chr19_-_29812952_29812974	0.378854	Clock	ENSMUST00000099525.3|Ranbp6|ENSMUSG00000074909.3|RAN binding protein 6
mm10_v2_chr5_-_74702891_74702914	0.371758	Clock	ENSMUST00000117388.1|Lnx1|ENSMUSG00000029228.9|ligand of numb-protein X 1
mm10_v2_chr4_-_57143437_57143624	0.36307	Clock	ENSMUST00000095076.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b 	ENSMUST00000030142.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b
mm10_v2_chr6_-_23839137_23839267	0.356944	Clock	ENSMUST00000166458.2|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000142913.2|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000115357.1|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000069074.7|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000115361.2|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000018122.7|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000115355.1|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000115356.2|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2
mm10_v2_chr1_-_153332724_153332804	0.352631	Clock	ENSMUST00000027752.8|Lamc1|ENSMUSG00000026478.8|laminin, gamma 1
mm10_v2_chr1_-_52499980_52499980	0.34672	Clock	ENSMUST00000164747.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr9_-_48480540_48480640	0.345583	Clock	ENSMUST00000034524.3|Rexo2|ENSMUSG00000032026.6|REX2, RNA exonuclease 2 homolog (S. cerevisiae)
mm10_v2_chr2_+_18055203_18055237	0.335166	Clock	ENSMUST00000028076.8|Mllt10|ENSMUSG00000026743.10|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm10_v2_chr11_+_106789235_106789335	0.3109	Clock	ENSMUST00000103068.3|Cep95|ENSMUSG00000018372.7|centrosomal protein 95 	ENSMUST00000018516.4|Cep95|ENSMUSG00000018372.7|centrosomal protein 95
mm10_v2_chr18_+_42511496_42511521	0.309992	Clock	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr5_+_76951382_76951394	0.296016	Clock	ENSMUST00000141687.1|Paics|ENSMUSG00000029247.11|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm10_v2_chr19_-_29805507_29805507	0.290406	Clock	ENSMUST00000175726.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr16_-_35490873_35490891	0.285331	Clock	ENSMUST00000023550.7|Pdia5|ENSMUSG00000022844.7|protein disulfide isomerase associated 5
mm10_v2_chr11_-_106216318_106216363	0.283093	Clock	ENSMUST00000002043.3|Ccdc47|ENSMUSG00000078622.2|coiled-coil domain containing 47
mm10_v2_chr5_+_76951307_76951368	0.283057	Clock	ENSMUST00000031160.9|Paics|ENSMUSG00000029247.11|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase 	ENSMUST00000120912.1|Paics|ENSMUSG00000029247.11|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase 	ENSMUST00000117536.1|Paics|ENSMUSG00000029247.11|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm10_v2_chr4_+_21848039_21848077	0.280481	Clock	ENSMUST00000098238.2|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18 	ENSMUST00000108229.1|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18
mm10_v2_chr12_+_102129019_102129174	0.270422	Clock	ENSMUST00000079020.4|Slc24a4|ENSMUSG00000041771.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm10_v2_chr12_+_71136848_71136848	0.265091	Clock	ENSMUST00000149564.1|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene 	ENSMUST00000045907.8|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene
mm10_v2_chr4_+_44756609_44756682	0.264552	Clock	ENSMUST00000143385.1|Zcchc7|ENSMUSG00000035649.11|zinc finger, CCHC domain containing 7
mm10_v2_chr4_+_44756553_44756601	0.262238	Clock	ENSMUST00000107824.2|Zcchc7|ENSMUSG00000035649.11|zinc finger, CCHC domain containing 7
mm10_v2_chr6_-_49214954_49215022	0.254455	Clock	ENSMUST00000031838.7|Igf2bp3|ENSMUSG00000029814.8|insulin-like growth factor 2 mRNA binding protein 3
mm10_v2_chr14_-_118706180_118706234	0.251837	Clock	ENSMUST00000036554.6|Abcc4|ENSMUSG00000032849.7|ATP-binding cassette, sub-family C (CFTR/MRP), member 4 	ENSMUST00000166646.1|Abcc4|ENSMUSG00000032849.7|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm10_v2_chr11_-_17211504_17211573	0.237845	Clock	ENSMUST00000020317.7|Pno1|ENSMUSG00000020116.7|partner of NOB1 homolog (S. cerevisiae)
mm10_v2_chr11_+_60417238_60417301	0.237072	Clock	ENSMUST00000070681.6|Gid4|ENSMUSG00000018415.8|GID complex subunit 4, VID24 homolog (S. cerevisiae)
mm10_v2_chr12_-_31950170_31950197	0.236517	Clock	ENSMUST00000176520.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr3_-_95882193_95882231	0.235745	Clock	ENSMUST00000159863.1|Gm129|ENSMUSG00000038550.4|predicted gene 129 	ENSMUST00000159739.1|Gm129|ENSMUSG00000038550.4|predicted gene 129 	ENSMUST00000036418.3|Gm129|ENSMUSG00000038550.4|predicted gene 129
mm10_v2_chr9_+_44066993_44067024	0.235189	Clock	ENSMUST00000034508.7|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr12_-_31950210_31950246	0.234581	Clock	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr11_+_101316917_101316977	0.233735	Clock	ENSMUST00000151385.1|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm10_v2_chr11_+_78178651_78178772	0.228786	Clock	ENSMUST00000092880.7|Tlcd1|ENSMUSG00000019437.11|TLC domain containing 1 	ENSMUST00000127587.1|Tlcd1|ENSMUSG00000019437.11|TLC domain containing 1 	ENSMUST00000108338.1|Tlcd1|ENSMUSG00000019437.11|TLC domain containing 1
mm10_v2_chr15_-_38078842_38078860	0.228586	Clock	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chrX_-_36864238_36864246	0.218883	Clock	ENSMUST00000115249.3|C330007P06Rik|ENSMUSG00000006423.9|RIKEN cDNA C330007P06 gene 	ENSMUST00000115248.3|C330007P06Rik|ENSMUSG00000006423.9|RIKEN cDNA C330007P06 gene
mm10_v2_chr3_+_135825788_135825800	0.218607	Clock	ENSMUST00000167390.1|Slc39a8|ENSMUSG00000053897.9|solute carrier family 39 (metal ion transporter), member 8
mm10_v2_chr1_-_55088024_55088102	0.216403	Clock	ENSMUST00000027123.8|Hspd1|ENSMUSG00000025980.8|heat shock protein 1 (chaperonin)
mm10_v2_chr9_+_44067072_44067134	0.208145	Clock	ENSMUST00000177054.1|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr12_+_8674681_8674765	0.206022	Clock	ENSMUST00000168361.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000169750.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000163730.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr5_-_45857473_45857615	0.204825	Clock	ENSMUST00000016026.7|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like 	ENSMUST00000067997.6|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like 	ENSMUST00000045586.6|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like
mm10_v2_chr10_+_36974558_36974579	0.199551	Clock	ENSMUST00000105510.1|Hdac2|ENSMUSG00000019777.10|histone deacetylase 2
mm10_v2_chr1_-_55088156_55088243	0.199547	Clock	ENSMUST00000127861.1|Hspd1|ENSMUSG00000025980.8|heat shock protein 1 (chaperonin) 	ENSMUST00000144077.1|Hspd1|ENSMUSG00000025980.8|heat shock protein 1 (chaperonin)
mm10_v2_chr9_-_114781986_114781998	0.198847	Clock	ENSMUST00000035009.8|Cmtm7|ENSMUSG00000032436.10|CKLF-like MARVEL transmembrane domain containing 7 	ENSMUST00000084867.7|Cmtm7|ENSMUSG00000032436.10|CKLF-like MARVEL transmembrane domain containing 7
mm10_v2_chr13_+_37826225_37826315	0.19684	Clock	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr12_+_69372112_69372172	0.196628	Clock	ENSMUST00000050063.7|Arf6|ENSMUSG00000044147.7|ADP-ribosylation factor 6
mm10_v2_chr12_+_76255209_76255239	0.196014	Clock	ENSMUST00000021443.5|Mthfd1|ENSMUSG00000021048.6|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
mm10_v2_chr19_+_45015168_45015187	0.187495	Clock	ENSMUST00000039016.6|Lzts2|ENSMUSG00000035342.7|leucine zipper, putative tumor suppressor 2
mm10_v2_chr9_+_107587711_107587746	0.178752	Clock	ENSMUST00000010192.5|Ifrd2|ENSMUSG00000010048.5|interferon-related developmental regulator 2
mm10_v2_chr6_+_125096145_125096162	0.176599	Clock	ENSMUST00000112390.1|Chd4|ENSMUSG00000063870.6|chromodomain helicase DNA binding protein 4
mm10_v2_chr16_-_45158453_45158520	0.17243	Clock	ENSMUST00000181750.1|Slc35a5|ENSMUSG00000022664.5|solute carrier family 35, member A5
mm10_v2_chr11_-_99089296_99089318	0.172305	Clock	ENSMUST00000017751.2|Tns4|ENSMUSG00000017607.3|tensin 4
mm10_v2_chr2_+_115581667_115581743	0.167607	Clock	ENSMUST00000166472.1|BC052040|ENSMUSG00000040282.7|cDNA sequence BC052040 	ENSMUST00000110918.2|BC052040|ENSMUSG00000040282.7|cDNA sequence BC052040
mm10_v2_chr12_+_17544873_17544951	0.163821	Clock	ENSMUST00000171737.1|Odc1|ENSMUSG00000011179.7|ornithine decarboxylase, structural 1
mm10_v2_chr4_-_124693568_124693606	0.156839	Clock	ENSMUST00000030738.7|Utp11l|ENSMUSG00000028907.7|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm10_v2_chr5_+_45493374_45493437	0.156122	Clock	ENSMUST00000046122.6|Lap3|ENSMUSG00000039682.6|leucine aminopeptidase 3
mm10_v2_chr16_-_33967032_33967043	0.156075	Clock	ENSMUST00000023510.6|Umps|ENSMUSG00000022814.6|uridine monophosphate synthetase
mm10_v2_chr12_+_90738201_90738226	0.151081	Clock	ENSMUST00000181874.1|Gm26512|ENSMUSG00000097157.1|predicted gene, 26512
mm10_v2_chr15_+_81811414_81811491	0.150858	Clock	ENSMUST00000023024.7|Tef|ENSMUSG00000022389.8|thyrotroph embryonic factor
mm10_v2_chrX_-_95444789_95444872	0.145343	Clock	ENSMUST00000084535.5|Amer1|ENSMUSG00000050332.7|APC membrane recruitment 1
mm10_v2_chr11_+_74649462_74649520	0.14524	Clock	ENSMUST00000092915.5|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog 	ENSMUST00000117818.1|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog
mm10_v2_chr3_-_95882232_95882251	0.141181	Clock	ENSMUST00000161866.1|Gm129|ENSMUSG00000038550.4|predicted gene 129
mm10_v2_chr17_+_71204647_71204693	0.138257	Clock	ENSMUST00000126681.1|Lpin2|ENSMUSG00000024052.11|lipin 2
mm10_v2_chr7_-_46795881_46796085	0.133157	Clock	ENSMUST00000107653.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000107654.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000014562.7|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000152759.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human)
mm10_v2_chr7_-_46795661_46795722	0.133058	Clock	ENSMUST00000123725.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human)
mm10_v2_chr5_-_137786681_137786715	0.128265	Clock	ENSMUST00000132726.1|Mepce|ENSMUSG00000029726.10|methylphosphate capping enzyme
mm10_v2_chr3_+_145576196_145576266	0.123483	Clock	ENSMUST00000098534.4|Znhit6|ENSMUSG00000074182.4|zinc finger, HIT type 6
mm10_v2_chr17_-_87265866_87265935	0.123049	Clock	ENSMUST00000145895.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000129616.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000155904.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000151155.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000144236.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000024963.3|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2
mm10_v2_chr3_+_135825648_135825664	0.117237	Clock	ENSMUST00000180196.1|Slc39a8|ENSMUSG00000053897.9|solute carrier family 39 (metal ion transporter), member 8
mm10_v2_chr11_+_106216926_106216968	0.11545	Clock	ENSMUST00000021046.5|Ddx42|ENSMUSG00000020705.6|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
mm10_v2_chr5_+_129941949_129942113	0.115272	Clock	ENSMUST00000051758.7|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1 	ENSMUST00000073945.4|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1
mm10_v2_chr4_-_133756769_133756794	0.113056	Clock	ENSMUST00000008024.6|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like)
mm10_v2_chr4_+_132274385_132274433	0.111716	Clock	ENSMUST00000105963.1|Taf12|ENSMUSG00000028899.5|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr11_-_106788845_106788883	0.105602	Clock	ENSMUST00000123339.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr4_+_32657107_32657166	0.102671	Clock	ENSMUST00000071642.4|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast) 	ENSMUST00000178134.1|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast)
mm10_v2_chr4_-_132075250_132075292	0.101914	Clock	ENSMUST00000105970.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000105975.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr11_+_72441341_72441386	0.1018	Clock	ENSMUST00000045633.5|Mybbp1a|ENSMUSG00000040463.10|MYB binding protein (P160) 1a
mm10_v2_chr11_-_106789157_106789192	0.101771	Clock	ENSMUST00000129585.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr12_+_16653470_16653486	0.096442	Clock	ENSMUST00000111064.1|Ntsr2|ENSMUSG00000020591.10|neurotensin receptor 2
mm10_v2_chr5_+_139543889_139543904	0.0962206	Clock	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr15_+_39076885_39076938	0.0959477	Clock	ENSMUST00000067072.3|Cthrc1|ENSMUSG00000054196.6|collagen triple helix repeat containing 1
mm10_v2_chr1_-_12991109_12991177	0.0955957	Clock	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr18_+_32837225_32837240	0.0912131	Clock	ENSMUST00000166214.1|Wdr36|ENSMUSG00000038299.9|WD repeat domain 36 	ENSMUST00000053663.9|Wdr36|ENSMUSG00000038299.9|WD repeat domain 36
mm10_v2_chr11_+_102189620_102189734	0.0911509	Clock	ENSMUST00000070334.3|G6pc3|ENSMUSG00000034793.9|glucose 6 phosphatase, catalytic, 3 	ENSMUST00000078975.7|G6pc3|ENSMUSG00000034793.9|glucose 6 phosphatase, catalytic, 3
mm10_v2_chrX_-_101085352_101085372	0.0823231	Clock	ENSMUST00000101362.1|Slc7a3|ENSMUSG00000031297.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 	ENSMUST00000073927.4|Slc7a3|ENSMUSG00000031297.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
mm10_v2_chr10_-_14544972_14545036	0.0821268	Clock	ENSMUST00000041168.4|Gpr126|ENSMUSG00000039116.4|G protein-coupled receptor 126
mm10_v2_chr10_+_36974536_36974556	0.0817917	Clock	ENSMUST00000019911.7|Hdac2|ENSMUSG00000019777.10|histone deacetylase 2
mm10_v2_chr17_+_35001282_35001347	0.0772759	Clock	ENSMUST00000174260.1|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase
mm10_v2_chr10_-_127522428_127522454	0.0764074	Clock	ENSMUST00000026470.4|Shmt2|ENSMUSG00000025403.4|serine hydroxymethyltransferase 2 (mitochondrial)
mm10_v2_chr6_-_47813512_47813528	0.0713292	Clock	ENSMUST00000077290.7|Pdia4|ENSMUSG00000025823.8|protein disulfide isomerase associated 4
mm10_v2_chr11_-_47379405_47379522	0.070021	Clock	ENSMUST00000077221.5|Sgcd|ENSMUSG00000020354.9|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm10_v2_chr4_+_107968332_107968424	0.0670981	Clock	ENSMUST00000106713.3|Slc1a7|ENSMUSG00000008932.9|solute carrier family 1 (glutamate transporter), member 7
mm10_v2_chr11_+_114851814_114851880	0.065475	Clock	ENSMUST00000053361.5|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C 	ENSMUST00000021071.7|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C 	ENSMUST00000136785.1|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C
mm10_v2_chr11_+_17211912_17211964	0.0639693	Clock	ENSMUST00000046955.6|Wdr92|ENSMUSG00000078970.5|WD repeat domain 92
mm10_v2_chr13_-_100015562_100015647	0.0636395	Clock	ENSMUST00000022148.6|Mccc2|ENSMUSG00000021646.8|methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
mm10_v2_chr11_-_76217490_76217664	0.0629312	Clock	ENSMUST00000102500.4|Gemin4|ENSMUSG00000049396.6|gem (nuclear organelle) associated protein 4
mm10_v2_chr19_+_46056539_46056586	0.0574534	Clock	ENSMUST00000111899.1|Pprc1|ENSMUSG00000055491.7|peroxisome proliferative activated receptor, gamma, coactivator-related 1 	ENSMUST00000099392.3|Pprc1|ENSMUSG00000055491.7|peroxisome proliferative activated receptor, gamma, coactivator-related 1 	ENSMUST00000062322.4|Pprc1|ENSMUSG00000055491.7|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm10_v2_chr5_-_137786651_137786668	0.0571119	Clock	ENSMUST00000031740.9|Mepce|ENSMUSG00000029726.10|methylphosphate capping enzyme
mm10_v2_chr7_+_46796088_46796134	0.056822	Clock	ENSMUST00000006774.4|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1 	ENSMUST00000165031.1|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1
mm10_v2_chr12_-_31950535_31950560	0.0521447	Clock	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr10_+_44268328_44268379	0.04481	Clock	ENSMUST00000039286.4|Atg5|ENSMUSG00000038160.6|autophagy related 5
mm10_v2_chr4_-_148444744_148444783	0.0435732	Clock	ENSMUST00000051633.2|Ubiad1|ENSMUSG00000047719.2|UbiA prenyltransferase domain containing 1
mm10_v2_chr18_+_76241580_76241741	0.0414707	Clock	ENSMUST00000168423.1|Smad2|ENSMUSG00000024563.9|SMAD family member 2 	ENSMUST00000091831.6|Smad2|ENSMUSG00000024563.9|SMAD family member 2
mm10_v2_chr2_+_130906461_130906500	0.0309344	Clock	ENSMUST00000028781.8|Atrn|ENSMUSG00000027312.8|attractin
mm10_v2_chr19_+_6975048_6975071	0.0302269	Clock	ENSMUST00000070850.6|Ppp1r14b|ENSMUSG00000056612.6|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm10_v2_chr16_+_20611585_20611635	0.0271523	Clock	ENSMUST00000115522.2|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000119224.1|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000079600.4|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000120394.1|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2
mm10_v2_chr11_-_70982987_70983026	0.0227447	Clock	ENSMUST00000078528.6|C1qbp|ENSMUSG00000018446.8|complement component 1, q subcomponent binding protein
mm10_v2_chr4_+_129960760_129960808	0.0222102	Clock	ENSMUST00000139884.1|1700003M07Rik|ENSMUSG00000085389.1|RIKEN cDNA 1700003M07 gene
mm10_v2_chr4_+_123282778_123282911	0.0202518	Clock	ENSMUST00000106243.1|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4 	ENSMUST00000106241.1|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4 	ENSMUST00000080178.6|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4
mm10_v2_chr14_-_89898466_89898466	0.0199986	Clock	ENSMUST00000081204.4|Gm10110|ENSMUSG00000062093.4|predicted gene 10110
mm10_v2_chr5_+_76974683_76974727	0.0151666	Clock	ENSMUST00000101087.3|Srp72|ENSMUSG00000036323.8|signal recognition particle 72 	ENSMUST00000120550.1|Srp72|ENSMUSG00000036323.8|signal recognition particle 72
mm10_v2_chr3_-_101604580_101604629	0.00820606	Clock	ENSMUST00000036493.6|Atp1a1|ENSMUSG00000033161.9|ATPase, Na+/K+ transporting, alpha 1 polypeptide
mm10_v2_chr3_-_108210438_108210502	0.00707104	Clock	ENSMUST00000117784.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2 	ENSMUST00000119650.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2 	ENSMUST00000117409.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2
mm10_v2_chr9_-_110654161_110654212	0.0052656	Clock	ENSMUST00000133191.1|Nbeal2|ENSMUSG00000056724.8|neurobeachin-like 2 	ENSMUST00000167320.1|Nbeal2|ENSMUSG00000056724.8|neurobeachin-like 2
mm10_v2_chr11_+_101316200_101316275	0.0029149	Clock	ENSMUST00000142640.1|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) 	ENSMUST00000019470.7|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
