mm10_v2_chr4_-_82505749_82505802	4.37501	Emx1_Emx2	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr4_-_82505707_82505739	4.1681	Emx1_Emx2	ENSMUST00000107248.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107247.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr4_-_82505274_82505358	3.68708	Emx1_Emx2	ENSMUST00000050872.8|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000064770.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr7_-_103827922_103828096	2.21736	Emx1_Emx2	ENSMUST00000023934.6|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain 	ENSMUST00000153218.1|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain
mm10_v2_chr17_-_31636631_31636790	2.18398	Emx1_Emx2	ENSMUST00000135425.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase 	ENSMUST00000151718.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase 	ENSMUST00000155814.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase
mm10_v2_chr1_-_158356258_158356313	1.9757	Emx1_Emx2	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr10_+_81257277_81257309	1.68035	Emx1_Emx2	ENSMUST00000117488.1|Matk|ENSMUSG00000004933.11|megakaryocyte-associated tyrosine kinase 	ENSMUST00000105328.3|Matk|ENSMUSG00000004933.11|megakaryocyte-associated tyrosine kinase 	ENSMUST00000121205.1|Matk|ENSMUSG00000004933.11|megakaryocyte-associated tyrosine kinase
mm10_v2_chr17_-_36032682_36032855	1.42862	Emx1_Emx2	ENSMUST00000102678.4|H2-T23|ENSMUSG00000067212.8|histocompatibility 2, T region locus 23
mm10_v2_chr4_+_118961578_118961612	1.29173	Emx1_Emx2	ENSMUST00000058651.4|Lao1|ENSMUSG00000024903.10|L-amino acid oxidase 1
mm10_v2_chr9_-_20728219_20728219	1.28392	Emx1_Emx2	ENSMUST00000034692.7|Olfm2|ENSMUSG00000032172.7|olfactomedin 2
mm10_v2_chr10_+_90071095_90071117	1.27771	Emx1_Emx2	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr14_+_58893465_58893506	1.14104	Emx1_Emx2	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr15_+_99006056_99006056	1.121	Emx1_Emx2	ENSMUST00000079818.3|Gm8973|ENSMUSG00000064081.3|predicted gene 8973
mm10_v2_chr6_-_144209448_144209469	0.981882	Emx1_Emx2	ENSMUST00000077160.5|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_-_93452679_93452687	0.979053	Emx1_Emx2	ENSMUST00000111257.1|Cd82|ENSMUSG00000027215.7|CD82 antigen 	ENSMUST00000145553.1|Cd82|ENSMUSG00000027215.7|CD82 antigen
mm10_v2_chr6_-_144209558_144209647	0.934738	Emx1_Emx2	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr6_-_144209471_144209487	0.904848	Emx1_Emx2	ENSMUST00000038815.7|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_-_5676046_5676065	0.870541	Emx1_Emx2	ENSMUST00000114987.3|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr3_+_121953213_121953295	0.865637	Emx1_Emx2	ENSMUST00000037958.7|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29 	ENSMUST00000128366.1|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29
mm10_v2_chr1_+_32172711_32172806	0.862413	Emx1_Emx2	ENSMUST00000027226.5|Khdrbs2|ENSMUSG00000026058.5|KH domain containing, RNA binding, signal transduction associated 2
mm10_v2_chr16_-_97170707_97170759	0.844224	Emx1_Emx2	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr3_+_127633134_127633140	0.807992	Emx1_Emx2	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chr16_-_26371828_26371846	0.784743	Emx1_Emx2	ENSMUST00000023154.2|Cldn1|ENSMUSG00000022512.2|claudin 1
mm10_v2_chr1_+_93685574_93685694	0.768915	Emx1_Emx2	ENSMUST00000027499.6|Bok|ENSMUSG00000026278.8|BCL2-related ovarian killer protein
mm10_v2_chr17_-_47043039_47043039	0.746522	Emx1_Emx2	ENSMUST00000075152.5|Gm4945|ENSMUSG00000062472.5|predicted gene 4945
mm10_v2_chr13_+_16014457_16014475	0.742728	Emx1_Emx2	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr9_+_34904913_34904913	0.742685	Emx1_Emx2	ENSMUST00000045091.6|Kirrel3|ENSMUSG00000032036.9|kin of IRRE like 3 (Drosophila)
mm10_v2_chr7_-_97738222_97738317	0.736676	Emx1_Emx2	ENSMUST00000084986.6|Aqp11|ENSMUSG00000042797.8|aquaporin 11
mm10_v2_chr2_-_156392829_156392993	0.712263	Emx1_Emx2	ENSMUST00000088578.2|2900097C17Rik|ENSMUSG00000067833.2|RIKEN cDNA 2900097C17 gene
mm10_v2_chr7_+_39588931_39588931	0.662894	Emx1_Emx2	ENSMUST00000178791.1|Gm2058|ENSMUSG00000074903.4|predicted gene 2058 	ENSMUST00000098511.3|Gm2058|ENSMUSG00000074903.4|predicted gene 2058
mm10_v2_chr4_+_102589687_102589843	0.646518	Emx1_Emx2	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr12_-_12940600_12940616	0.636928	Emx1_Emx2	ENSMUST00000130990.1|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chrX_-_59166080_59166164	0.609388	Emx1_Emx2	ENSMUST00000119306.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chr14_-_18893376_18893420	0.581585	Emx1_Emx2	ENSMUST00000151926.1|Ube2e2|ENSMUSG00000058317.5|ubiquitin-conjugating enzyme E2E 2
mm10_v2_chr8_+_85432686_85432686	0.573542	Emx1_Emx2	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr16_-_63864114_63864182	0.55749	Emx1_Emx2	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr19_+_34217588_34217624	0.511755	Emx1_Emx2	ENSMUST00000119603.1|Stambpl1|ENSMUSG00000024776.11|STAM binding protein like 1
mm10_v2_chr9_+_108648720_108648840	0.458663	Emx1_Emx2	ENSMUST00000098384.2|Gm10621|ENSMUSG00000074075.2|predicted gene 10621
mm10_v2_chr13_-_23934156_23934225	0.458595	Emx1_Emx2	ENSMUST00000052776.2|Hist1h2ba|ENSMUSG00000050799.2|histone cluster 1, H2ba
mm10_v2_chr10_+_81183000_81183048	0.45015	Emx1_Emx2	ENSMUST00000178422.1|Dapk3|ENSMUSG00000034974.6|death-associated protein kinase 3
mm10_v2_chr15_-_33687840_33687883	0.432444	Emx1_Emx2	ENSMUST00000042021.3|Tspyl5|ENSMUSG00000038984.3|testis-specific protein, Y-encoded-like 5
mm10_v2_chr5_-_118244861_118245116	0.432421	Emx1_Emx2	ENSMUST00000117177.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000133372.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000154786.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000121369.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2
mm10_v2_chr8_-_125898291_125898322	0.429435	Emx1_Emx2	ENSMUST00000047239.6|Pcnxl2|ENSMUSG00000060212.7|pecanex-like 2 (Drosophila)
mm10_v2_chr7_+_43672003_43672040	0.419121	Emx1_Emx2	ENSMUST00000038332.8|Ctu1|ENSMUSG00000038888.8|cytosolic thiouridylase subunit 1 homolog (S. pombe)
mm10_v2_chr9_+_56418624_56418681	0.418843	Emx1_Emx2	ENSMUST00000034879.3|Hmg20a|ENSMUSG00000032329.3|high mobility group 20A
mm10_v2_chr7_+_126781483_126781483	0.411906	Emx1_Emx2	ENSMUST00000172352.1|Tbx6|ENSMUSG00000030699.10|T-box 6 	ENSMUST00000094037.4|Tbx6|ENSMUSG00000030699.10|T-box 6
mm10_v2_chr2_-_34826071_34826087	0.410926	Emx1_Emx2	ENSMUST00000113077.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000028220.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr16_+_11406618_11406675	0.406965	Emx1_Emx2	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr14_-_57133585_57133618	0.404199	Emx1_Emx2	ENSMUST00000039380.8|Gjb6|ENSMUSG00000040055.8|gap junction protein, beta 6
mm10_v2_chr6_+_129533183_129533205	0.385048	Emx1_Emx2	ENSMUST00000032264.6|Gabarapl1|ENSMUSG00000030161.6|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm10_v2_chr17_-_45599603_45599623	0.381173	Emx1_Emx2	ENSMUST00000171847.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000166633.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000169729.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr14_+_55560010_55560037	0.366852	Emx1_Emx2	ENSMUST00000147981.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000133256.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr8_+_93810832_93810843	0.357522	Emx1_Emx2	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr17_+_29274078_29274129	0.357511	Emx1_Emx2	ENSMUST00000149405.2|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004
mm10_v2_chr11_+_121237216_121237289	0.347078	Emx1_Emx2	ENSMUST00000103015.3|Narf|ENSMUSG00000000056.7|nuclear prelamin A recognition factor
mm10_v2_chr10_+_69787431_69787458	0.341771	Emx1_Emx2	ENSMUST00000183240.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr1_-_40085823_40085862	0.327305	Emx1_Emx2	ENSMUST00000181756.1|Gm16894|ENSMUSG00000097899.1|predicted gene, 16894
mm10_v2_chr2_-_34826187_34826240	0.322985	Emx1_Emx2	ENSMUST00000113075.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000113080.2|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000091020.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr7_+_110772604_110772754	0.31992	Emx1_Emx2	ENSMUST00000005829.6|Ampd3|ENSMUSG00000005686.10|adenosine monophosphate deaminase 3
mm10_v2_chr7_-_142661858_142661880	0.292234	Emx1_Emx2	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr6_-_57535422_57535447	0.289433	Emx1_Emx2	ENSMUST00000042766.3|Ppm1k|ENSMUSG00000037826.3|protein phosphatase 1K (PP2C domain containing)
mm10_v2_chr4_+_126609818_126609896	0.287744	Emx1_Emx2	ENSMUST00000097886.3|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene 	ENSMUST00000164362.1|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene
mm10_v2_chr4_-_150914401_150914480	0.284756	Emx1_Emx2	ENSMUST00000105675.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7
mm10_v2_chr18_-_15403680_15403687	0.284681	Emx1_Emx2	ENSMUST00000079081.6|Aqp4|ENSMUSG00000024411.9|aquaporin 4
mm10_v2_chr4_+_145510759_145510791	0.282272	Emx1_Emx2	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr9_-_15301555_15301607	0.275686	Emx1_Emx2	ENSMUST00000034414.8|4931406C07Rik|ENSMUSG00000031938.8|RIKEN cDNA 4931406C07 gene
mm10_v2_chr8_+_69300776_69300776	0.269832	Emx1_Emx2	ENSMUST00000078257.6|D130040H23Rik|ENSMUSG00000079038.2|RIKEN cDNA D130040H23 gene
mm10_v2_chr7_+_129591859_129591871	0.263941	Emx1_Emx2	ENSMUST00000084519.5|Wdr11|ENSMUSG00000042055.7|WD repeat domain 11
mm10_v2_chr8_+_72219726_72219785	0.263556	Emx1_Emx2	ENSMUST00000003123.8|Fam32a|ENSMUSG00000003039.8|family with sequence similarity 32, member A
mm10_v2_chr3_-_37125943_37125969	0.261459	Emx1_Emx2	ENSMUST00000029275.5|Il2|ENSMUSG00000027720.7|interleukin 2
mm10_v2_chr8_-_21906412_21906437	0.257384	Emx1_Emx2	ENSMUST00000051965.4|Defb11|ENSMUSG00000045337.4|defensin beta 11
mm10_v2_chr5_+_135009152_135009317	0.252352	Emx1_Emx2	ENSMUST00000111216.1|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11 	ENSMUST00000046999.8|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11
mm10_v2_chr1_+_163779575_163779592	0.250883	Emx1_Emx2	ENSMUST00000027877.6|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3 	ENSMUST00000077642.5|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3
mm10_v2_chr15_-_36496722_36496808	0.249851	Emx1_Emx2	ENSMUST00000057486.7|Ankrd46|ENSMUSG00000048307.7|ankyrin repeat domain 46
mm10_v2_chrX_-_102505359_102505412	0.248864	Emx1_Emx2	ENSMUST00000087916.4|Hdac8|ENSMUSG00000067567.6|histone deacetylase 8
mm10_v2_chr15_+_99295087_99295279	0.246907	Emx1_Emx2	ENSMUST00000128352.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast) 	ENSMUST00000145482.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm10_v2_chr11_+_72689997_72690015	0.243271	Emx1_Emx2	ENSMUST00000155998.1|Ankfy1|ENSMUSG00000020790.8|ankyrin repeat and FYVE domain containing 1
mm10_v2_chr15_-_102510681_102510705	0.235909	Emx1_Emx2	ENSMUST00000171565.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12
mm10_v2_chr2_+_36230426_36230491	0.23587	Emx1_Emx2	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr13_+_23555023_23555039	0.228196	Emx1_Emx2	ENSMUST00000045301.6|Hist1h1d|ENSMUSG00000052565.5|histone cluster 1, H1d
mm10_v2_chr1_-_184999549_184999549	0.227651	Emx1_Emx2	ENSMUST00000027929.4|Mark1|ENSMUSG00000026620.6|MAP/microtubule affinity-regulating kinase 1
mm10_v2_chr12_+_36314160_36314171	0.227438	Emx1_Emx2	ENSMUST00000041407.5|Sostdc1|ENSMUSG00000036169.5|sclerostin domain containing 1
mm10_v2_chr4_-_134245579_134245604	0.226093	Emx1_Emx2	ENSMUST00000030644.7|Zfp593|ENSMUSG00000028840.10|zinc finger protein 593
mm10_v2_chr13_+_94976435_94976452	0.2235	Emx1_Emx2	ENSMUST00000160409.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41 	ENSMUST00000159647.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41 	ENSMUST00000167155.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41
mm10_v2_chr4_-_64276595_64276604	0.223451	Emx1_Emx2	ENSMUST00000141162.1|Gm11217|ENSMUSG00000085032.1|predicted gene 11217
mm10_v2_chr19_-_32196393_32196428	0.217083	Emx1_Emx2	ENSMUST00000151822.1|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chrX_-_160994665_160994702	0.209665	Emx1_Emx2	ENSMUST00000087104.4|Cdkl5|ENSMUSG00000031292.8|cyclin-dependent kinase-like 5
mm10_v2_chr4_+_110397661_110397708	0.209389	Emx1_Emx2	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr6_-_101377342_101377388	0.20628	Emx1_Emx2	ENSMUST00000151175.1|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chrX_-_150814265_150814345	0.203949	Emx1_Emx2	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr14_+_69347587_69347587	0.202762	Emx1_Emx2	ENSMUST00000064831.5|Entpd4|ENSMUSG00000095463.2|ectonucleoside triphosphate diphosphohydrolase 4
mm10_v2_chr17_-_32822200_32822200	0.202037	Emx1_Emx2	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr3_-_130730375_130730398	0.197673	Emx1_Emx2	ENSMUST00000079085.6|Rpl34|ENSMUSG00000062006.6|ribosomal protein L34
mm10_v2_chr13_-_97747373_97747384	0.193131	Emx1_Emx2	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr4_+_110397764_110397808	0.186	Emx1_Emx2	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr13_-_97747399_97747414	0.183869	Emx1_Emx2	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr17_+_46772635_46772635	0.183747	Emx1_Emx2	ENSMUST00000071430.5|2310039H08Rik|ENSMUSG00000062619.5|RIKEN cDNA 2310039H08 gene
mm10_v2_chr7_-_30534180_30534180	0.179324	Emx1_Emx2	ENSMUST00000044338.4|Arhgap33|ENSMUSG00000036882.6|Rho GTPase activating protein 33
mm10_v2_chr10_-_88605017_88605152	0.17092	Emx1_Emx2	ENSMUST00000119185.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type 	ENSMUST00000121629.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type
mm10_v2_chr4_+_32657107_32657166	0.164814	Emx1_Emx2	ENSMUST00000071642.4|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast) 	ENSMUST00000178134.1|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast)
mm10_v2_chr7_-_125491397_125491413	0.162003	Emx1_Emx2	ENSMUST00000138616.1|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chr2_+_144594054_144594083	0.148304	Emx1_Emx2	ENSMUST00000136628.1|Gm561|ENSMUSG00000074754.4|predicted gene 561
mm10_v2_chr8_-_85432841_85432859	0.14412	Emx1_Emx2	ENSMUST00000047749.5|4921524J17Rik|ENSMUSG00000036934.8|RIKEN cDNA 4921524J17 gene
mm10_v2_chr2_+_151543877_151543899	0.139831	Emx1_Emx2	ENSMUST00000142271.1|Fkbp1a|ENSMUSG00000032966.8|FK506 binding protein 1a
mm10_v2_chr13_-_92030897_92030908	0.132922	Emx1_Emx2	ENSMUST00000149630.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr6_-_89595647_89595658	0.107105	Emx1_Emx2	ENSMUST00000032172.8|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6 	ENSMUST00000113550.3|Chchd6|ENSMUSG00000030086.10|coiled-coil-helix-coiled-coil-helix domain containing 6
mm10_v2_chr17_-_45686899_45686923	0.105437	Emx1_Emx2	ENSMUST00000156254.1|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chrX_+_8271133_8271179	0.0986405	Emx1_Emx2	ENSMUST00000127103.1|Slc38a5|ENSMUSG00000031170.8|solute carrier family 38, member 5 	ENSMUST00000115591.1|Slc38a5|ENSMUSG00000031170.8|solute carrier family 38, member 5
mm10_v2_chr2_-_155930190_155930310	0.0981947	Emx1_Emx2	ENSMUST00000109636.4|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109631.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr4_+_41966058_41966058	0.0825228	Emx1_Emx2	ENSMUST00000108026.2|Gm20938|ENSMUSG00000078746.2|predicted gene, 20938
mm10_v2_chr12_-_87444017_87444017	0.082158	Emx1_Emx2	ENSMUST00000091090.4|2700073G19Rik|ENSMUSG00000021041.7|RIKEN cDNA 2700073G19 gene
mm10_v2_chr12_-_84617326_84617466	0.0750404	Emx1_Emx2	ENSMUST00000021666.4|Abcd4|ENSMUSG00000021240.5|ATP-binding cassette, sub-family D (ALD), member 4
mm10_v2_chr3_+_88716884_88716906	0.0736438	Emx1_Emx2	ENSMUST00000172252.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr3_+_32436376_32436376	0.0672111	Emx1_Emx2	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr3_+_137341067_137341095	0.0642047	Emx1_Emx2	ENSMUST00000122064.1|Emcn|ENSMUSG00000054690.11|endomucin
mm10_v2_chr10_+_79996479_79996505	0.0608125	Emx1_Emx2	ENSMUST00000132517.1|Abca7|ENSMUSG00000035722.9|ATP-binding cassette, sub-family A (ABC1), member 7
mm10_v2_chr6_-_145047636_145047661	0.0604029	Emx1_Emx2	ENSMUST00000149769.1|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr8_+_45507768_45507818	0.0575351	Emx1_Emx2	ENSMUST00000067065.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000098788.3|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000067107.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000171337.2|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000138049.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000141039.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr3_+_88716838_88716883	0.0552796	Emx1_Emx2	ENSMUST00000029692.8|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1 	ENSMUST00000171645.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr1_-_23909687_23909706	0.0521084	Emx1_Emx2	ENSMUST00000129254.1|Smap1|ENSMUSG00000026155.7|small ArfGAP 1
mm10_v2_chr13_+_23763660_23763674	0.0515725	Emx1_Emx2	ENSMUST00000055770.1|Hist1h1a|ENSMUSG00000049539.1|histone cluster 1, H1a
mm10_v2_chr18_-_36726730_36726745	0.0508849	Emx1_Emx2	ENSMUST00000061829.6|Cd14|ENSMUSG00000051439.6|CD14 antigen
mm10_v2_chr2_-_160619971_160619971	0.0467239	Emx1_Emx2	ENSMUST00000109473.1|Gm14221|ENSMUSG00000078956.2|predicted gene 14221
mm10_v2_chr2_-_155930018_155930066	0.0419173	Emx1_Emx2	ENSMUST00000152766.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000139232.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109632.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000006036.6|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000142655.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000159238.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr1_-_4785671_4785744	0.037336	Emx1_Emx2	ENSMUST00000130201.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15 	ENSMUST00000156816.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15
mm10_v2_chr2_+_69789647_69789749	0.0283416	Emx1_Emx2	ENSMUST00000112266.1|Phospho2|ENSMUSG00000027088.4|phosphatase, orphan 2
mm10_v2_chr2_-_175703646_175703646	0.0236186	Emx1_Emx2	ENSMUST00000109027.2|Gm4245|ENSMUSG00000095545.1|predicted gene 4245 	ENSMUST00000179061.1|Gm4245|ENSMUSG00000095545.1|predicted gene 4245 	ENSMUST00000131041.1|Gm4245|ENSMUSG00000095545.1|predicted gene 4245
mm10_v2_chr4_+_83417715_83417758	0.02353	Emx1_Emx2	ENSMUST00000030206.3|Snapc3|ENSMUSG00000028483.7|small nuclear RNA activating complex, polypeptide 3 	ENSMUST00000071544.4|Snapc3|ENSMUSG00000028483.7|small nuclear RNA activating complex, polypeptide 3
mm10_v2_chr10_+_128322443_128322476	0.0220219	Emx1_Emx2	ENSMUST00000026446.2|Cnpy2|ENSMUSG00000025381.2|canopy 2 homolog (zebrafish)
mm10_v2_chr15_+_85510812_85510812	0.0187285	Emx1_Emx2	ENSMUST00000079690.2|Gm4825|ENSMUSG00000063548.2|predicted pseudogene 4825
mm10_v2_chrX_+_106027259_106027293	0.0180545	Emx1_Emx2	ENSMUST00000113557.1|Atp7a|ENSMUSG00000033792.6|ATPase, Cu++ transporting, alpha polypeptide
mm10_v2_chr6_+_124304646_124304671	0.0172783	Emx1_Emx2	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr18_-_6241486_6241550	0.0164946	Emx1_Emx2	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr7_-_122101735_122101886	0.015132	Emx1_Emx2	ENSMUST00000139456.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000106471.2|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000123296.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000033157.3|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm10_v2_chr11_+_5788480_5788560	0.0151053	Emx1_Emx2	ENSMUST00000109845.1|Dbnl|ENSMUSG00000020476.8|drebrin-like 	ENSMUST00000020769.7|Dbnl|ENSMUSG00000020476.8|drebrin-like 	ENSMUST00000102928.4|Dbnl|ENSMUSG00000020476.8|drebrin-like
mm10_v2_chr6_-_129533267_129533275	0.0147789	Emx1_Emx2	ENSMUST00000181594.1|1700101I11Rik|ENSMUSG00000097675.1|RIKEN cDNA 1700101I11 gene
mm10_v2_chr14_+_118137101_118137178	0.0143653	Emx1_Emx2	ENSMUST00000022728.2|Gpr180|ENSMUSG00000022131.2|G protein-coupled receptor 180
mm10_v2_chrX_-_74393003_74393072	0.0137669	Emx1_Emx2	ENSMUST00000015427.6|Fam3a|ENSMUSG00000031399.9|family with sequence similarity 3, member A
mm10_v2_chr1_-_37496095_37496156	0.0132748	Emx1_Emx2	ENSMUST00000148047.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A 	ENSMUST00000143636.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr7_+_126976338_126976400	0.0119759	Emx1_Emx2	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr3_+_32436151_32436151	0.0114294	Emx1_Emx2	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr11_-_42000284_42000356	0.0109811	Emx1_Emx2	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr3_+_121531603_121531634	0.0105234	Emx1_Emx2	ENSMUST00000180804.1|A530020G20Rik|ENSMUSG00000097124.1|RIKEN cDNA A530020G20 gene
mm10_v2_chr15_+_80711292_80711340	0.00982609	Emx1_Emx2	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr4_-_155645408_155645408	0.00952765	Emx1_Emx2	ENSMUST00000115821.2|Gm10563|ENSMUSG00000073682.3|predicted gene 10563
mm10_v2_chr4_-_149099802_149099876	0.00825241	Emx1_Emx2	ENSMUST00000103217.4|Pex14|ENSMUSG00000028975.10|peroxisomal biogenesis factor 14
mm10_v2_chr12_-_90969768_90969790	0.00805396	Emx1_Emx2	ENSMUST00000181184.1|4930544I03Rik|ENSMUSG00000097071.1|RIKEN cDNA 4930544I03 gene
mm10_v2_chr16_+_21794320_21794381	0.0061001	Emx1_Emx2	ENSMUST00000181780.1|1300002E11Rik|ENSMUSG00000097290.1|RIKEN cDNA 1300002E11 gene 	ENSMUST00000181960.1|1300002E11Rik|ENSMUSG00000097290.1|RIKEN cDNA 1300002E11 gene
mm10_v2_chr6_+_42245907_42245977	0.0053853	Emx1_Emx2	ENSMUST00000031897.5|Gstk1|ENSMUSG00000029864.5|glutathione S-transferase kappa 1
mm10_v2_chrX_+_106027300_106027323	0.00534445	Emx1_Emx2	ENSMUST00000055941.6|Atp7a|ENSMUSG00000033792.6|ATPase, Cu++ transporting, alpha polypeptide
mm10_v2_chr1_+_63176818_63176919	0.00511739	Emx1_Emx2	ENSMUST00000129339.1|Eef1b2|ENSMUSG00000025967.10|eukaryotic translation elongation factor 1 beta 2
mm10_v2_chr13_-_106847267_106847267	0.00221203	Emx1_Emx2	ENSMUST00000057427.4|Lrrc70|ENSMUSG00000078933.1|leucine rich repeat containing 70
