mm10_v2_chr8_+_66386292_66386308	3.223	Foxp2_Foxp3	ENSMUST00000039540.5|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110253.2|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr8_-_46294592_46294671	2.89073	Foxp2_Foxp3	ENSMUST00000058636.7|Helt|ENSMUSG00000047171.7|helt bHLH transcription factor
mm10_v2_chr1_+_19212054_19212106	2.88275	Foxp2_Foxp3	ENSMUST00000064976.4|Tfap2b|ENSMUSG00000025927.7|transcription factor AP-2 beta
mm10_v2_chr15_+_3270767_3271006	2.35921	Foxp2_Foxp3	ENSMUST00000082424.4|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159158.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159216.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000160311.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1
mm10_v2_chr5_+_28165690_28165717	2.05254	Foxp2_Foxp3	ENSMUST00000036177.7|En2|ENSMUSG00000039095.7|engrailed 2
mm10_v2_chr2_-_28916412_28916440	1.74537	Foxp2_Foxp3	ENSMUST00000050776.2|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila) 	ENSMUST00000113849.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr10_+_60106452_60106468	1.7312	Foxp2_Foxp3	ENSMUST00000165024.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr12_-_57546121_57546141	1.66028	Foxp2_Foxp3	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr6_+_30541582_30541650	1.53874	Foxp2_Foxp3	ENSMUST00000096066.4|Cpa2|ENSMUSG00000071553.4|carboxypeptidase A2, pancreatic
mm10_v2_chr14_-_48662740_48662872	1.52532	Foxp2_Foxp3	ENSMUST00000122009.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr2_-_28916668_28916668	1.52235	Foxp2_Foxp3	ENSMUST00000113847.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr3_+_5218546_5218561	1.41135	Foxp2_Foxp3	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr8_+_23669653_23669671	1.37256	Foxp2_Foxp3	ENSMUST00000042352.4|Zmat4|ENSMUSG00000037492.9|zinc finger, matrin type 4
mm10_v2_chr1_+_66386968_66386999	1.31868	Foxp2_Foxp3	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr3_+_109573907_109573990	1.29963	Foxp2_Foxp3	ENSMUST00000106576.2|Vav3|ENSMUSG00000033721.10|vav 3 oncogene
mm10_v2_chr3_+_5218516_5218544	1.29112	Foxp2_Foxp3	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr2_+_9882622_9882646	1.27939	Foxp2_Foxp3	ENSMUST00000114919.1|4930412O13Rik|ENSMUSG00000025783.2|RIKEN cDNA 4930412O13 gene
mm10_v2_chr3_+_5218589_5218614	1.27423	Foxp2_Foxp3	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr19_-_34255325_34255342	1.20617	Foxp2_Foxp3	ENSMUST00000039631.8|Acta2|ENSMUSG00000035783.8|actin, alpha 2, smooth muscle, aorta
mm10_v2_chr19_+_4855129_4855269	1.16539	Foxp2_Foxp3	ENSMUST00000119694.1|Ctsf|ENSMUSG00000083282.2|cathepsin F
mm10_v2_chr8_+_58912257_58912257	1.10597	Foxp2_Foxp3	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr11_+_78499087_78499123	1.08151	Foxp2_Foxp3	ENSMUST00000017488.4|Vtn|ENSMUSG00000017344.4|vitronectin
mm10_v2_chr6_+_141524379_141524449	1.06053	Foxp2_Foxp3	ENSMUST00000032362.9|Slco1c1|ENSMUSG00000030235.11|solute carrier organic anion transporter family, member 1c1
mm10_v2_chr13_+_72632597_72632625	1.05448	Foxp2_Foxp3	ENSMUST00000172353.1|Irx2|ENSMUSG00000001504.9|Iroquois related homeobox 2 (Drosophila)
mm10_v2_chr11_+_70214105_70214132	1.04033	Foxp2_Foxp3	ENSMUST00000094055.3|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11 	ENSMUST00000136328.1|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11 	ENSMUST00000126296.1|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11 	ENSMUST00000153993.2|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11
mm10_v2_chr18_-_47333311_47333373	0.998761	Foxp2_Foxp3	ENSMUST00000126684.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000156422.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr3_+_134236483_134236500	0.99714	Foxp2_Foxp3	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr5_-_103211251_103211334	0.959982	Foxp2_Foxp3	ENSMUST00000060871.5|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112846.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000170792.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112847.2|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr6_-_23248264_23248390	0.951016	Foxp2_Foxp3	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr15_+_80623499_80623549	0.930155	Foxp2_Foxp3	ENSMUST00000043149.7|Grap2|ENSMUSG00000042351.8|GRB2-related adaptor protein 2
mm10_v2_chr12_+_109452833_109452849	0.929221	Foxp2_Foxp3	ENSMUST00000056110.8|Dlk1|ENSMUSG00000040856.11|delta-like 1 homolog (Drosophila)
mm10_v2_chr19_+_55741810_55741842	0.923564	Foxp2_Foxp3	ENSMUST00000111657.3|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000061496.9|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000041717.7|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111662.4|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr8_+_31091593_31091650	0.918585	Foxp2_Foxp3	ENSMUST00000161713.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr2_-_65529275_65529404	0.912307	Foxp2_Foxp3	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr11_-_100397740_100397792	0.898589	Foxp2_Foxp3	ENSMUST00000001592.8|Jup|ENSMUSG00000001552.8|junction plakoglobin 	ENSMUST00000107403.1|Jup|ENSMUSG00000001552.8|junction plakoglobin
mm10_v2_chr15_+_92597104_92597121	0.869671	Foxp2_Foxp3	ENSMUST00000035399.8|Pdzrn4|ENSMUSG00000036218.9|PDZ domain containing RING finger 4
mm10_v2_chr2_-_148046896_148046991	0.852486	Foxp2_Foxp3	ENSMUST00000172928.1|Foxa2|ENSMUSG00000037025.5|forkhead box A2 	ENSMUST00000047315.3|Foxa2|ENSMUSG00000037025.5|forkhead box A2
mm10_v2_chr15_+_4375462_4375511	0.828081	Foxp2_Foxp3	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr7_+_110772604_110772754	0.825995	Foxp2_Foxp3	ENSMUST00000005829.6|Ampd3|ENSMUSG00000005686.10|adenosine monophosphate deaminase 3
mm10_v2_chr3_-_52104891_52104922	0.778396	Foxp2_Foxp3	ENSMUST00000121440.1|Maml3|ENSMUSG00000061143.9|mastermind like 3 (Drosophila)
mm10_v2_chr5_-_28467093_28467109	0.775019	Foxp2_Foxp3	ENSMUST00000002708.3|Shh|ENSMUSG00000002633.3|sonic hedgehog
mm10_v2_chr1_+_12718496_12718545	0.757897	Foxp2_Foxp3	ENSMUST00000088585.3|Sulf1|ENSMUSG00000016918.9|sulfatase 1
mm10_v2_chr2_-_9883993_9883993	0.751705	Foxp2_Foxp3	ENSMUST00000114915.2|9230102O04Rik|ENSMUSG00000079602.2|RIKEN cDNA 9230102O04 gene
mm10_v2_chr8_+_45885479_45885494	0.729828	Foxp2_Foxp3	ENSMUST00000034053.5|Pdlim3|ENSMUSG00000031636.6|PDZ and LIM domain 3
mm10_v2_chr19_-_58455398_58455458	0.696739	Foxp2_Foxp3	ENSMUST00000026076.7|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr6_+_104492790_104492965	0.682665	Foxp2_Foxp3	ENSMUST00000161446.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000161070.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000089215.5|Cntn6|ENSMUSG00000030092.8|contactin 6
mm10_v2_chr7_+_82175156_82175199	0.681822	Foxp2_Foxp3	ENSMUST00000180243.1|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr19_+_55742056_55742066	0.681804	Foxp2_Foxp3	ENSMUST00000111659.2|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr2_-_170406501_170406518	0.678943	Foxp2_Foxp3	ENSMUST00000154650.1|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1
mm10_v2_chr11_+_77765588_77765643	0.676034	Foxp2_Foxp3	ENSMUST00000164315.1|Myo18a|ENSMUSG00000000631.13|myosin XVIIIA
mm10_v2_chr19_+_55741884_55741919	0.667488	Foxp2_Foxp3	ENSMUST00000111658.3|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111654.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr14_-_29721835_29721886	0.666131	Foxp2_Foxp3	ENSMUST00000022567.7|Cacna2d3|ENSMUSG00000021991.7|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm10_v2_chr11_+_69095217_69095289	0.662566	Foxp2_Foxp3	ENSMUST00000101004.2|Per1|ENSMUSG00000020893.11|period circadian clock 1
mm10_v2_chr19_-_58455161_58455324	0.655955	Foxp2_Foxp3	ENSMUST00000135730.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1 	ENSMUST00000152507.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr1_+_51289106_51289142	0.649019	Foxp2_Foxp3	ENSMUST00000051572.6|Sdpr|ENSMUSG00000045954.6|serum deprivation response
mm10_v2_chrX_+_71663665_71663671	0.644453	Foxp2_Foxp3	ENSMUST00000070449.5|Gpr50|ENSMUSG00000056380.7|G-protein-coupled receptor 50
mm10_v2_chr18_+_5593566_5593602	0.643701	Foxp2_Foxp3	ENSMUST00000160910.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr10_-_33624587_33624769	0.641999	Foxp2_Foxp3	ENSMUST00000160299.1|Clvs2|ENSMUSG00000019785.7|clavesin 2 	ENSMUST00000019920.6|Clvs2|ENSMUSG00000019785.7|clavesin 2
mm10_v2_chr14_+_64589802_64589848	0.635889	Foxp2_Foxp3	ENSMUST00000180610.1|A930011O12Rik|ENSMUSG00000097545.1|RIKEN cDNA A930011O12 gene
mm10_v2_chr4_+_144892813_144892835	0.625968	Foxp2_Foxp3	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr9_-_77347816_77347887	0.615336	Foxp2_Foxp3	ENSMUST00000184138.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184006.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000185144.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000034910.9|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr13_+_98354234_98354250	0.611854	Foxp2_Foxp3	ENSMUST00000105098.3|Foxd1|ENSMUSG00000078302.3|forkhead box D1
mm10_v2_chr6_-_134897815_134897925	0.608579	Foxp2_Foxp3	ENSMUST00000165392.1|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19 	ENSMUST00000046255.7|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19 	ENSMUST00000111932.1|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19 	ENSMUST00000116515.2|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19
mm10_v2_chr1_+_9601163_9601256	0.607761	Foxp2_Foxp3	ENSMUST00000088666.3|3110035E14Rik|ENSMUSG00000067879.3|RIKEN cDNA 3110035E14 gene
mm10_v2_chr12_+_52699297_52699411	0.604922	Foxp2_Foxp3	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr10_+_21882184_21882239	0.603549	Foxp2_Foxp3	ENSMUST00000120509.1|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr15_-_58214882_58214926	0.590338	Foxp2_Foxp3	ENSMUST00000022986.6|Fbxo32|ENSMUSG00000022358.6|F-box protein 32
mm10_v2_chr4_-_44710408_44710418	0.586106	Foxp2_Foxp3	ENSMUST00000134968.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000173821.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000174319.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000173733.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000172866.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000165417.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000107825.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000102932.3|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000107827.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000107826.2|Pax5|ENSMUSG00000014030.9|paired box gene 5
mm10_v2_chr10_+_123264076_123264125	0.583956	Foxp2_Foxp3	ENSMUST00000050756.7|Fam19a2|ENSMUSG00000044071.7|family with sequence similarity 19, member A2
mm10_v2_chr6_+_121636173_121636237	0.575408	Foxp2_Foxp3	ENSMUST00000032203.7|A2m|ENSMUSG00000030111.8|alpha-2-macroglobulin
mm10_v2_chr6_+_134830216_134830270	0.575398	Foxp2_Foxp3	ENSMUST00000111937.1|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr9_+_74848437_74848531	0.567594	Foxp2_Foxp3	ENSMUST00000161862.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551 	ENSMUST00000160950.1|Gm20649|ENSMUSG00000093662.1|predicted gene 20649 	ENSMUST00000162089.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551 	ENSMUST00000160017.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551
mm10_v2_chr1_-_64956731_64956782	0.566649	Foxp2_Foxp3	ENSMUST00000123225.1|Plekhm3|ENSMUSG00000051344.7|pleckstrin homology domain containing, family M, member 3
mm10_v2_chr8_+_31089471_31089760	0.561963	Foxp2_Foxp3	ENSMUST00000036631.7|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative) 	ENSMUST00000170204.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr2_+_136713444_136713492	0.55238	Foxp2_Foxp3	ENSMUST00000028727.4|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25 	ENSMUST00000110098.3|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25
mm10_v2_chr5_+_81021202_81021241	0.538002	Foxp2_Foxp3	ENSMUST00000117253.1|Lphn3|ENSMUSG00000037605.10|latrophilin 3 	ENSMUST00000120128.1|Lphn3|ENSMUSG00000037605.10|latrophilin 3
mm10_v2_chr2_+_32095518_32095595	0.535421	Foxp2_Foxp3	ENSMUST00000057423.5|Ppapdc3|ENSMUSG00000051373.5|phosphatidic acid phosphatase type 2 domain containing 3
mm10_v2_chr9_-_77251829_77251838	0.534877	Foxp2_Foxp3	ENSMUST00000184322.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184316.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr9_+_44072196_44072211	0.531385	Foxp2_Foxp3	ENSMUST00000176671.1|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr12_-_56535047_56535106	0.5307	Foxp2_Foxp3	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr3_+_118430299_118430368	0.527981	Foxp2_Foxp3	ENSMUST00000180774.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871
mm10_v2_chr6_+_14901344_14901364	0.521416	Foxp2_Foxp3	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr1_-_64956807_64956824	0.5206	Foxp2_Foxp3	ENSMUST00000097713.1|Plekhm3|ENSMUSG00000051344.7|pleckstrin homology domain containing, family M, member 3
mm10_v2_chr5_+_122643878_122644009	0.511268	Foxp2_Foxp3	ENSMUST00000100737.3|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000121489.1|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000031425.8|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000086247.5|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7
mm10_v2_chr1_+_179546303_179546370	0.507554	Foxp2_Foxp3	ENSMUST00000040706.8|Cnst|ENSMUSG00000038949.8|consortin, connexin sorting protein
mm10_v2_chr17_+_70561739_70561787	0.506358	Foxp2_Foxp3	ENSMUST00000097288.2|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr19_-_58455903_58455914	0.500942	Foxp2_Foxp3	ENSMUST00000131877.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr2_-_163645125_163645136	0.5005	Foxp2_Foxp3	ENSMUST00000017851.3|Serinc3|ENSMUSG00000017707.9|serine incorporator 3
mm10_v2_chr15_-_54919961_54920037	0.499779	Foxp2_Foxp3	ENSMUST00000167541.2|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000041591.9|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000173516.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr10_-_18234930_18235008	0.49836	Foxp2_Foxp3	ENSMUST00000052648.8|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000080860.6|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000173243.1|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A
mm10_v2_chr18_-_43393346_43393381	0.488216	Foxp2_Foxp3	ENSMUST00000025379.7|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr9_-_77347787_77347815	0.486477	Foxp2_Foxp3	ENSMUST00000184848.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184415.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr6_-_148444336_148444389	0.485096	Foxp2_Foxp3	ENSMUST00000060095.8|Tmtc1|ENSMUSG00000030306.8|transmembrane and tetratricopeptide repeat containing 1 	ENSMUST00000100772.3|Tmtc1|ENSMUSG00000030306.8|transmembrane and tetratricopeptide repeat containing 1
mm10_v2_chr19_-_37207293_37207508	0.473944	Foxp2_Foxp3	ENSMUST00000132580.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000079754.4|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000136286.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126188.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126781.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr15_+_25940846_25940934	0.47392	Foxp2_Foxp3	ENSMUST00000110438.1|Fam134b|ENSMUSG00000022270.9|family with sequence similarity 134, member B
mm10_v2_chrX_-_23285532_23285578	0.473466	Foxp2_Foxp3	ENSMUST00000115319.2|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr2_+_4718145_4718205	0.461982	Foxp2_Foxp3	ENSMUST00000056914.6|Bend7|ENSMUSG00000048186.8|BEN domain containing 7
mm10_v2_chr16_-_57754707_57754737	0.459293	Foxp2_Foxp3	ENSMUST00000089332.4|Col8a1|ENSMUSG00000068196.4|collagen, type VIII, alpha 1
mm10_v2_chr10_+_29211637_29211649	0.459144	Foxp2_Foxp3	ENSMUST00000092627.4|9330159F19Rik|ENSMUSG00000004360.8|RIKEN cDNA 9330159F19 gene
mm10_v2_chr10_+_62071014_62071020	0.458605	Foxp2_Foxp3	ENSMUST00000053865.5|Gm5424|ENSMUSG00000046687.5|predicted gene 5424
mm10_v2_chr4_+_144893077_144893103	0.458135	Foxp2_Foxp3	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr10_+_69925954_69926133	0.446555	Foxp2_Foxp3	ENSMUST00000181974.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182795.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182437.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chrX_-_140543177_140543195	0.438675	Foxp2_Foxp3	ENSMUST00000055738.5|Tsc22d3|ENSMUSG00000031431.7|TSC22 domain family, member 3
mm10_v2_chr1_-_190170178_190170237	0.437752	Foxp2_Foxp3	ENSMUST00000177288.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr1_+_34005872_34005908	0.436631	Foxp2_Foxp3	ENSMUST00000182296.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr11_-_42000532_42000592	0.435062	Foxp2_Foxp3	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr5_+_21372642_21372714	0.431847	Foxp2_Foxp3	ENSMUST00000035799.5|Fgl2|ENSMUSG00000039899.5|fibrinogen-like protein 2
mm10_v2_chr13_+_76579670_76579678	0.431086	Foxp2_Foxp3	ENSMUST00000126960.1|Mctp1|ENSMUSG00000021596.10|multiple C2 domains, transmembrane 1 	ENSMUST00000109583.2|Mctp1|ENSMUSG00000021596.10|multiple C2 domains, transmembrane 1
mm10_v2_chr1_-_128592284_128592307	0.422414	Foxp2_Foxp3	ENSMUST00000052172.6|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4 	ENSMUST00000142893.1|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4
mm10_v2_chr2_+_164486856_164486898	0.422327	Foxp2_Foxp3	ENSMUST00000109349.2|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm10_v2_chr7_-_44849075_44849075	0.421919	Foxp2_Foxp3	ENSMUST00000047085.8|Tbc1d17|ENSMUSG00000038520.8|TBC1 domain family, member 17
mm10_v2_chr3_+_68584154_68584181	0.42182	Foxp2_Foxp3	ENSMUST00000182997.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr10_-_117282262_117282280	0.416264	Foxp2_Foxp3	ENSMUST00000092163.7|Lyz2|ENSMUSG00000069516.7|lysozyme 2
mm10_v2_chr1_+_57845534_57845571	0.408319	Foxp2_Foxp3	ENSMUST00000169772.1|Spats2l|ENSMUSG00000038305.8|spermatogenesis associated, serine-rich 2-like
mm10_v2_chr2_+_28641227_28641262	0.407825	Foxp2_Foxp3	ENSMUST00000028155.5|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113869.1|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113867.2|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1
mm10_v2_chr1_-_170110491_170110532	0.405167	Foxp2_Foxp3	ENSMUST00000027985.2|Ddr2|ENSMUSG00000026674.3|discoidin domain receptor family, member 2
mm10_v2_chr4_-_53159885_53159900	0.402122	Foxp2_Foxp3	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr3_+_65109343_65109420	0.4013	Foxp2_Foxp3	ENSMUST00000159525.1|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENSMUST00000049230.8|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm10_v2_chr6_+_134830145_134830179	0.39385	Foxp2_Foxp3	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr5_+_16553488_16553550	0.390764	Foxp2_Foxp3	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr7_+_16310412_16310455	0.386039	Foxp2_Foxp3	ENSMUST00000136781.1|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr9_-_102354685_102354699	0.385862	Foxp2_Foxp3	ENSMUST00000035129.7|Ephb1|ENSMUSG00000032537.8|Eph receptor B1 	ENSMUST00000085169.5|Ephb1|ENSMUSG00000032537.8|Eph receptor B1
mm10_v2_chr6_+_135362931_135362961	0.382651	Foxp2_Foxp3	ENSMUST00000032330.9|Emp1|ENSMUSG00000030208.9|epithelial membrane protein 1
mm10_v2_chr14_-_96519067_96519102	0.380684	Foxp2_Foxp3	ENSMUST00000022666.7|Klhl1|ENSMUSG00000022076.9|kelch-like 1
mm10_v2_chr3_-_50443603_50443615	0.379841	Foxp2_Foxp3	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr10_+_79716588_79716666	0.372794	Foxp2_Foxp3	ENSMUST00000099513.1|Hcn2|ENSMUSG00000020331.3|hyperpolarization-activated, cyclic nucleotide-gated K+ 2 	ENSMUST00000020581.2|Hcn2|ENSMUSG00000020331.3|hyperpolarization-activated, cyclic nucleotide-gated K+ 2
mm10_v2_chr18_+_37496997_37496997	0.37112	Foxp2_Foxp3	ENSMUST00000059571.5|Pcdhb19|ENSMUSG00000043313.5|protocadherin beta 19
mm10_v2_chrX_+_163911401_163911439	0.3694	Foxp2_Foxp3	ENSMUST00000140845.1|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr18_-_34624562_34624601	0.36128	Foxp2_Foxp3	ENSMUST00000003876.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115766.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000097626.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115765.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8
mm10_v2_chr15_-_54920115_54920146	0.351687	Foxp2_Foxp3	ENSMUST00000171545.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr4_+_11123950_11123980	0.350809	Foxp2_Foxp3	ENSMUST00000142297.1|Gm11827|ENSMUSG00000086765.1|predicted gene 11827
mm10_v2_chr10_-_105574435_105574451	0.349856	Foxp2_Foxp3	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr3_+_31902666_31902703	0.342695	Foxp2_Foxp3	ENSMUST00000119970.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENSMUST00000178668.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm10_v2_chr12_+_73584788_73584810	0.340882	Foxp2_Foxp3	ENSMUST00000021527.8|Prkch|ENSMUSG00000021108.11|protein kinase C, eta
mm10_v2_chr18_-_43373248_43373272	0.340266	Foxp2_Foxp3	ENSMUST00000118043.1|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr14_-_55560340_55560406	0.338385	Foxp2_Foxp3	ENSMUST00000066106.3|A730061H03Rik|ENSMUSG00000053588.3|RIKEN cDNA A730061H03 gene
mm10_v2_chr7_-_70366735_70366771	0.338073	Foxp2_Foxp3	ENSMUST00000089565.5|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr18_-_66022580_66022600	0.336878	Foxp2_Foxp3	ENSMUST00000143990.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr5_+_107437908_107437997	0.331174	Foxp2_Foxp3	ENSMUST00000094541.2|Btbd8|ENSMUSG00000070632.3|BTB (POZ) domain containing 8
mm10_v2_chr13_+_5861489_5861501	0.32992	Foxp2_Foxp3	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr4_-_154160632_154160696	0.32754	Foxp2_Foxp3	ENSMUST00000105639.3|Tprgl|ENSMUSG00000029030.8|transformation related protein 63 regulated like 	ENSMUST00000030896.8|Tprgl|ENSMUSG00000029030.8|transformation related protein 63 regulated like
mm10_v2_chr4_+_144893127_144893151	0.326641	Foxp2_Foxp3	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr13_+_37345338_37345365	0.320153	Foxp2_Foxp3	ENSMUST00000021860.5|Ly86|ENSMUSG00000021423.5|lymphocyte antigen 86
mm10_v2_chr6_+_5390387_5390427	0.32005	Foxp2_Foxp3	ENSMUST00000183358.1|Asb4|ENSMUSG00000042607.9|ankyrin repeat and SOCS box-containing 4
mm10_v2_chr3_-_146770218_146770261	0.316367	Foxp2_Foxp3	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr13_-_52929640_52929681	0.315759	Foxp2_Foxp3	ENSMUST00000120535.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000119311.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000021913.9|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000110031.3|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase
mm10_v2_chr7_+_16309577_16309641	0.31149	Foxp2_Foxp3	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr9_-_77347889_77347916	0.307814	Foxp2_Foxp3	ENSMUST00000185039.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr4_+_43384332_43384350	0.307648	Foxp2_Foxp3	ENSMUST00000136360.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr18_+_37489465_37489465	0.307494	Foxp2_Foxp3	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr4_-_151108244_151108303	0.305903	Foxp2_Foxp3	ENSMUST00000131948.1|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr14_+_61607455_61607482	0.300429	Foxp2_Foxp3	ENSMUST00000051184.8|Kcnrg|ENSMUSG00000046168.8|potassium channel regulator
mm10_v2_chr2_-_51972990_51973022	0.299816	Foxp2_Foxp3	ENSMUST00000145481.1|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor 	ENSMUST00000112705.2|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor
mm10_v2_chr13_+_16014457_16014475	0.299018	Foxp2_Foxp3	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr5_-_5265224_5265309	0.297934	Foxp2_Foxp3	ENSMUST00000115450.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr4_-_131937165_131937211	0.295651	Foxp2_Foxp3	ENSMUST00000155990.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr11_-_86993682_86993707	0.293295	Foxp2_Foxp3	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chr15_+_6422240_6422327	0.293122	Foxp2_Foxp3	ENSMUST00000163082.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr11_+_34314757_34314822	0.291752	Foxp2_Foxp3	ENSMUST00000165963.1|Fam196b|ENSMUSG00000069911.4|family with sequence similarity 196, member B 	ENSMUST00000093192.3|Fam196b|ENSMUSG00000069911.4|family with sequence similarity 196, member B
mm10_v2_chr16_-_97170707_97170759	0.286392	Foxp2_Foxp3	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr4_-_45012287_45012412	0.285109	Foxp2_Foxp3	ENSMUST00000055028.8|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5 	ENSMUST00000180217.1|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5 	ENSMUST00000107817.2|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5
mm10_v2_chr11_+_3332426_3332460	0.285029	Foxp2_Foxp3	ENSMUST00000136474.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr2_-_52558539_52558571	0.284224	Foxp2_Foxp3	ENSMUST00000102760.3|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit 	ENSMUST00000102761.2|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit
mm10_v2_chr2_-_104712122_104712180	0.281964	Foxp2_Foxp3	ENSMUST00000111118.1|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1 	ENSMUST00000028597.3|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1
mm10_v2_chr16_-_92400067_92400083	0.278176	Foxp2_Foxp3	ENSMUST00000023672.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr11_+_16257706_16257808	0.276665	Foxp2_Foxp3	ENSMUST00000109645.2|Vstm2a|ENSMUSG00000048834.9|V-set and transmembrane domain containing 2A 	ENSMUST00000109647.2|Vstm2a|ENSMUSG00000048834.9|V-set and transmembrane domain containing 2A
mm10_v2_chr12_-_72236692_72236724	0.275875	Foxp2_Foxp3	ENSMUST00000021497.9|Rtn1|ENSMUSG00000021087.11|reticulon 1 	ENSMUST00000137990.1|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr10_+_62133082_62133098	0.275803	Foxp2_Foxp3	ENSMUST00000050103.1|Neurog3|ENSMUSG00000044312.3|neurogenin 3
mm10_v2_chr9_+_78113275_78113346	0.275556	Foxp2_Foxp3	ENSMUST00000009972.5|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000117330.1|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000044551.7|Ick|ENSMUSG00000009828.9|intestinal cell kinase
mm10_v2_chr5_+_31048627_31048785	0.274796	Foxp2_Foxp3	ENSMUST00000013766.6|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor 	ENSMUST00000173215.1|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor 	ENSMUST00000153643.1|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor 	ENSMUST00000114659.2|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor
mm10_v2_chr15_-_56694525_56694554	0.271238	Foxp2_Foxp3	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr13_+_29016267_29016303	0.26967	Foxp2_Foxp3	ENSMUST00000140415.1|A330102I10Rik|ENSMUSG00000086363.1|RIKEN cDNA A330102I10 gene
mm10_v2_chr2_-_181578906_181578952	0.269526	Foxp2_Foxp3	ENSMUST00000136875.1|Uckl1|ENSMUSG00000089917.1|uridine-cytidine kinase 1-like 1
mm10_v2_chr6_-_5496296_5496316	0.269387	Foxp2_Foxp3	ENSMUST00000019721.4|Pdk4|ENSMUSG00000019577.4|pyruvate dehydrogenase kinase, isoenzyme 4
mm10_v2_chr3_-_144202300_144202345	0.26769	Foxp2_Foxp3	ENSMUST00000121796.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4 	ENSMUST00000121112.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr3_-_30793549_30793595	0.266527	Foxp2_Foxp3	ENSMUST00000180833.1|4933429H19Rik|ENSMUSG00000097786.1|RIKEN cDNA 4933429H19 gene
mm10_v2_chr13_-_52929458_52929497	0.265492	Foxp2_Foxp3	ENSMUST00000123599.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase
mm10_v2_chr4_-_117887279_117887290	0.26435	Foxp2_Foxp3	ENSMUST00000132073.1|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B
mm10_v2_chr7_-_4844665_4844699	0.263156	Foxp2_Foxp3	ENSMUST00000066041.5|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis) 	ENSMUST00000172377.1|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis)
mm10_v2_chr1_-_45503282_45503282	0.261603	Foxp2_Foxp3	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr10_-_96409038_96409038	0.261051	Foxp2_Foxp3	ENSMUST00000179683.1|Gm20091|ENSMUSG00000094249.1|predicted gene, 20091
mm10_v2_chr12_+_38781093_38781129	0.256062	Foxp2_Foxp3	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr8_+_58911755_58911755	0.255502	Foxp2_Foxp3	ENSMUST00000062978.6|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr1_-_139377041_139377078	0.253818	Foxp2_Foxp3	ENSMUST00000059825.5|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chr11_+_54438188_54438220	0.252448	Foxp2_Foxp3	ENSMUST00000046835.7|Fnip1|ENSMUSG00000035992.9|folliculin interacting protein 1
mm10_v2_chr16_+_19028232_19028232	0.251872	Foxp2_Foxp3	ENSMUST00000074116.4|Gm10088|ENSMUSG00000060811.4|predicted gene 10088
mm10_v2_chr12_+_77238093_77238122	0.250683	Foxp2_Foxp3	ENSMUST00000177595.1|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8 	ENSMUST00000171770.2|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8
mm10_v2_chr2_+_167538192_167538210	0.249734	Foxp2_Foxp3	ENSMUST00000052631.7|Snai1|ENSMUSG00000042821.7|snail homolog 1 (Drosophila)
mm10_v2_chr2_+_112265809_112265858	0.242354	Foxp2_Foxp3	ENSMUST00000110991.2|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chrM_+_11734_11757	0.241257	Foxp2_Foxp3	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr11_-_116110211_116110259	0.240677	Foxp2_Foxp3	ENSMUST00000106441.1|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47 	ENSMUST00000021120.5|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47
mm10_v2_chr1_+_131970589_131970609	0.238777	Foxp2_Foxp3	ENSMUST00000027695.6|Slc45a3|ENSMUSG00000026435.9|solute carrier family 45, member 3
mm10_v2_chr6_+_15185456_15185563	0.238511	Foxp2_Foxp3	ENSMUST00000115472.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115474.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000031545.7|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000137628.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr2_-_77519565_77519647	0.23848	Foxp2_Foxp3	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr18_+_65698253_65698277	0.237884	Foxp2_Foxp3	ENSMUST00000115097.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like 	ENSMUST00000117694.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like
mm10_v2_chr16_+_43510267_43510308	0.237784	Foxp2_Foxp3	ENSMUST00000114695.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr6_+_17491216_17491242	0.237203	Foxp2_Foxp3	ENSMUST00000080469.5|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr12_+_74297474_74297474	0.236786	Foxp2_Foxp3	ENSMUST00000072100.3|Dbpht2|ENSMUSG00000029878.5|DNA binding protein with his-thr domain
mm10_v2_chrM_-_14060_14074	0.236127	Foxp2_Foxp3	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr16_-_34263179_34263208	0.235935	Foxp2_Foxp3	ENSMUST00000114949.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114954.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr14_-_88471396_88471396	0.235122	Foxp2_Foxp3	ENSMUST00000061628.5|Pcdh20|ENSMUSG00000050505.6|protocadherin 20
mm10_v2_chr10_+_84576626_84576626	0.234671	Foxp2_Foxp3	ENSMUST00000020223.7|Tcp11l2|ENSMUSG00000020034.7|t-complex 11 (mouse) like 2
mm10_v2_chr5_+_3928033_3928178	0.233094	Foxp2_Foxp3	ENSMUST00000143365.1|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr7_+_113207465_113207595	0.232037	Foxp2_Foxp3	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr2_-_73892530_73892555	0.227847	Foxp2_Foxp3	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr1_-_133753681_133753857	0.227713	Foxp2_Foxp3	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr1_-_64121456_64121491	0.225411	Foxp2_Foxp3	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr15_+_5185700_5185742	0.224387	Foxp2_Foxp3	ENSMUST00000081640.5|Ttc33|ENSMUSG00000022151.10|tetratricopeptide repeat domain 33
mm10_v2_chr16_-_34262945_34262972	0.223618	Foxp2_Foxp3	ENSMUST00000114953.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr10_+_69534208_69534222	0.221524	Foxp2_Foxp3	ENSMUST00000182439.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092434.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092432.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092431.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000054167.8|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000047061.6|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr9_+_96196246_96196280	0.221361	Foxp2_Foxp3	ENSMUST00000165120.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000034982.9|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr1_-_132367879_132367894	0.21856	Foxp2_Foxp3	ENSMUST00000142609.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr9_-_77251871_77251880	0.218114	Foxp2_Foxp3	ENSMUST00000183955.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr4_-_117887292_117887353	0.217846	Foxp2_Foxp3	ENSMUST00000150204.1|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B 	ENSMUST00000147845.1|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B 	ENSMUST00000036380.7|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B 	ENSMUST00000136596.1|Atp6v0b|ENSMUSG00000033379.7|ATPase, H+ transporting, lysosomal V0 subunit B
mm10_v2_chr10_-_53647080_53647080	0.217557	Foxp2_Foxp3	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr2_-_73892619_73892639	0.214828	Foxp2_Foxp3	ENSMUST00000112007.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112016.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr18_+_37447641_37447674	0.214519	Foxp2_Foxp3	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr2_-_51973219_51973234	0.214342	Foxp2_Foxp3	ENSMUST00000028314.2|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor
mm10_v2_chr16_+_43235856_43235880	0.214251	Foxp2_Foxp3	ENSMUST00000146708.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr11_+_11115784_11115851	0.211957	Foxp2_Foxp3	ENSMUST00000056344.4|Vwc2|ENSMUSG00000050830.11|von Willebrand factor C domain containing 2
mm10_v2_chr15_+_5185519_5185560	0.206865	Foxp2_Foxp3	ENSMUST00000118193.1|Ttc33|ENSMUSG00000022151.10|tetratricopeptide repeat domain 33 	ENSMUST00000022751.8|Ttc33|ENSMUSG00000022151.10|tetratricopeptide repeat domain 33
mm10_v2_chr9_+_70656248_70656261	0.205595	Foxp2_Foxp3	ENSMUST00000098589.2|Gm10642|ENSMUSG00000074213.2|predicted gene 10642
mm10_v2_chr10_+_63386550_63386576	0.204252	Foxp2_Foxp3	ENSMUST00000043317.5|Dnajc12|ENSMUSG00000036764.5|DnaJ (Hsp40) homolog, subfamily C, member 12
mm10_v2_chr1_+_75142775_75142797	0.203179	Foxp2_Foxp3	ENSMUST00000097694.4|Fam134a|ENSMUSG00000049339.10|family with sequence similarity 134, member A
mm10_v2_chr18_+_37504264_37504296	0.202062	Foxp2_Foxp3	ENSMUST00000052179.6|Pcdhb20|ENSMUSG00000046191.6|protocadherin beta 20
mm10_v2_chr3_-_146781351_146781431	0.200925	Foxp2_Foxp3	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr12_-_85270564_85270608	0.200902	Foxp2_Foxp3	ENSMUST00000019378.6|Mlh3|ENSMUSG00000021245.8|mutL homolog 3 (E coli) 	ENSMUST00000166821.1|Mlh3|ENSMUSG00000021245.8|mutL homolog 3 (E coli)
mm10_v2_chr16_-_4880284_4880315	0.200379	Foxp2_Foxp3	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr1_-_64121389_64121452	0.200202	Foxp2_Foxp3	ENSMUST00000055001.3|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr6_+_29853746_29853790	0.200015	Foxp2_Foxp3	ENSMUST00000064872.6|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000152581.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000176265.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000154079.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr10_+_69534039_69534070	0.199669	Foxp2_Foxp3	ENSMUST00000182557.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr11_+_75531690_75531743	0.197498	Foxp2_Foxp3	ENSMUST00000149727.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000042561.7|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000108433.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000143035.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr2_-_73892588_73892616	0.197315	Foxp2_Foxp3	ENSMUST00000154456.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000090802.4|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000055833.5|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr8_+_19682268_19682270	0.194561	Foxp2_Foxp3	ENSMUST00000153710.1|Gm6483|ENSMUSG00000087153.1|predicted gene 6483 	ENSMUST00000127799.1|Gm6483|ENSMUSG00000087153.1|predicted gene 6483
mm10_v2_chr16_-_59555752_59555752	0.19411	Foxp2_Foxp3	ENSMUST00000179383.1|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3 	ENSMUST00000044604.8|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3
mm10_v2_chr18_+_51117754_51117898	0.1933	Foxp2_Foxp3	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr15_+_23036449_23036492	0.193051	Foxp2_Foxp3	ENSMUST00000164787.1|Cdh18|ENSMUSG00000040420.8|cadherin 18
mm10_v2_chr2_+_146855861_146855926	0.193028	Foxp2_Foxp3	ENSMUST00000099278.2|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1 	ENSMUST00000156232.1|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1
mm10_v2_chr14_+_55560480_55560533	0.189256	Foxp2_Foxp3	ENSMUST00000121622.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000143431.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000150481.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr15_+_99392882_99392903	0.189007	Foxp2_Foxp3	ENSMUST00000023749.8|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr12_+_69296676_69296798	0.187926	Foxp2_Foxp3	ENSMUST00000021362.4|Klhdc2|ENSMUSG00000020978.4|kelch domain containing 2
mm10_v2_chr10_+_39732099_39732140	0.187484	Foxp2_Foxp3	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr1_-_87573825_87573871	0.18671	Foxp2_Foxp3	ENSMUST00000068681.5|Ngef|ENSMUSG00000026259.8|neuronal guanine nucleotide exchange factor
mm10_v2_chr5_-_5420244_5420312	0.185809	Foxp2_Foxp3	ENSMUST00000167567.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr10_+_94576254_94576270	0.185747	Foxp2_Foxp3	ENSMUST00000117929.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr17_+_70522083_70522145	0.183794	Foxp2_Foxp3	ENSMUST00000148486.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1 	ENSMUST00000133717.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr7_+_90426312_90426312	0.183467	Foxp2_Foxp3	ENSMUST00000061391.7|Ccdc89|ENSMUSG00000044362.7|coiled-coil domain containing 89
mm10_v2_chr12_+_35047180_35047230	0.18295	Foxp2_Foxp3	ENSMUST00000048519.9|Snx13|ENSMUSG00000020590.9|sorting nexin 13 	ENSMUST00000163677.1|Snx13|ENSMUSG00000020590.9|sorting nexin 13
mm10_v2_chr17_+_70522149_70522169	0.182856	Foxp2_Foxp3	ENSMUST00000140728.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr11_-_102365111_102365280	0.18201	Foxp2_Foxp3	ENSMUST00000006749.9|Slc4a1|ENSMUSG00000006574.9|solute carrier family 4 (anion exchanger), member 1
mm10_v2_chr15_-_101850778_101850792	0.18186	Foxp2_Foxp3	ENSMUST00000023790.3|Krt1|ENSMUSG00000046834.6|keratin 1
mm10_v2_chr8_-_64205970_64206011	0.180974	Foxp2_Foxp3	ENSMUST00000066166.4|Tll1|ENSMUSG00000053626.4|tolloid-like
mm10_v2_chr3_-_33082004_33082068	0.180795	Foxp2_Foxp3	ENSMUST00000108225.3|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr4_+_105790534_105790534	0.177932	Foxp2_Foxp3	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr5_+_3928267_3928300	0.17655	Foxp2_Foxp3	ENSMUST00000044492.8|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr8_-_58911627_58911627	0.175549	Foxp2_Foxp3	ENSMUST00000077447.4|Galntl6|ENSMUSG00000061864.6|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm10_v2_chr19_-_42086338_42086375	0.174924	Foxp2_Foxp3	ENSMUST00000051772.8|Morn4|ENSMUSG00000049670.8|MORN repeat containing 4
mm10_v2_chr18_+_36952621_36952766	0.173838	Foxp2_Foxp3	ENSMUST00000115661.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chrX_-_43167817_43167838	0.172338	Foxp2_Foxp3	ENSMUST00000115058.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1 	ENSMUST00000115059.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr9_-_103230415_103230444	0.1719	Foxp2_Foxp3	ENSMUST00000035158.9|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr17_+_24886643_24886765	0.170687	Foxp2_Foxp3	ENSMUST00000117890.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000168265.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000120943.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000068508.6|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000119829.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3
mm10_v2_chr5_-_45450121_45450139	0.170488	Foxp2_Foxp3	ENSMUST00000127562.1|Qdpr|ENSMUSG00000015806.6|quinoid dihydropteridine reductase
mm10_v2_chr4_+_102570065_102570124	0.170355	Foxp2_Foxp3	ENSMUST00000097950.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chrX_-_102250940_102250959	0.170041	Foxp2_Foxp3	ENSMUST00000134887.1|Cited1|ENSMUSG00000051159.10|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
mm10_v2_chr7_+_130577334_130577484	0.169782	Foxp2_Foxp3	ENSMUST00000059145.7|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2 	ENSMUST00000084513.4|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr10_+_116177351_116177417	0.169587	Foxp2_Foxp3	ENSMUST00000155606.1|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R 	ENSMUST00000128399.1|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr18_+_77938452_77938477	0.16891	Foxp2_Foxp3	ENSMUST00000044622.5|Epg5|ENSMUSG00000039840.7|ectopic P-granules autophagy protein 5 homolog (C. elegans)
mm10_v2_chr12_-_15816762_15816881	0.168853	Foxp2_Foxp3	ENSMUST00000020922.7|Trib2|ENSMUSG00000020601.7|tribbles homolog 2 (Drosophila)
mm10_v2_chr8_-_41417042_41417135	0.168704	Foxp2_Foxp3	ENSMUST00000033999.6|Frg1|ENSMUSG00000031590.7|FSHD region gene 1
mm10_v2_chr5_+_139389785_139389920	0.168359	Foxp2_Foxp3	ENSMUST00000100514.2|Gpr146|ENSMUSG00000044197.7|G protein-coupled receptor 146
mm10_v2_chrX_+_151520655_151520681	0.167741	Foxp2_Foxp3	ENSMUST00000112666.1|Phf8|ENSMUSG00000041229.9|PHD finger protein 8 	ENSMUST00000168501.1|Phf8|ENSMUSG00000041229.9|PHD finger protein 8 	ENSMUST00000112662.2|Phf8|ENSMUSG00000041229.9|PHD finger protein 8
mm10_v2_chr3_-_123690806_123690847	0.16758	Foxp2_Foxp3	ENSMUST00000154668.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chrX_+_7722214_7722260	0.167077	Foxp2_Foxp3	ENSMUST00000043045.2|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116634.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115689.3|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000131077.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115688.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116633.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45
mm10_v2_chr11_-_17008647_17008702	0.166475	Foxp2_Foxp3	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr11_+_118433826_118433863	0.165259	Foxp2_Foxp3	ENSMUST00000106286.1|C1qtnf1|ENSMUSG00000017446.8|C1q and tumor necrosis factor related protein 1
mm10_v2_chr12_-_56613270_56613291	0.165239	Foxp2_Foxp3	ENSMUST00000072631.5|Nkx2-9|ENSMUSG00000058669.7|NK2 homeobox 9
mm10_v2_chrX_+_101376359_101376378	0.165207	Foxp2_Foxp3	ENSMUST00000119080.1|Gjb1|ENSMUSG00000047797.8|gap junction protein, beta 1
mm10_v2_chr9_-_112187898_112187938	0.164824	Foxp2_Foxp3	ENSMUST00000178410.1|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000172380.3|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr11_-_101226414_101226463	0.163356	Foxp2_Foxp3	ENSMUST00000100417.2|Ezh1|ENSMUSG00000006920.8|enhancer of zeste homolog 1 (Drosophila) 	ENSMUST00000107285.1|Ezh1|ENSMUSG00000006920.8|enhancer of zeste homolog 1 (Drosophila) 	ENSMUST00000107284.1|Ezh1|ENSMUSG00000006920.8|enhancer of zeste homolog 1 (Drosophila)
mm10_v2_chr1_-_54194048_54194048	0.163291	Foxp2_Foxp3	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr4_-_143299463_143299482	0.162255	Foxp2_Foxp3	ENSMUST00000119654.1|Pdpn|ENSMUSG00000028583.8|podoplanin
mm10_v2_chr14_+_55560904_55560974	0.161019	Foxp2_Foxp3	ENSMUST00000072530.4|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000128490.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr6_-_137571007_137571032	0.1609	Foxp2_Foxp3	ENSMUST00000100841.2|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr8_+_64947177_64947255	0.160056	Foxp2_Foxp3	ENSMUST00000079896.7|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192 	ENSMUST00000026595.5|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192
mm10_v2_chr2_-_51149100_51149115	0.159844	Foxp2_Foxp3	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr11_-_48946148_48946190	0.159346	Foxp2_Foxp3	ENSMUST00000104958.1|Psme2b|ENSMUSG00000078153.3|protease (prosome, macropain) activator subunit 2B
mm10_v2_chr6_-_87809757_87809787	0.155761	Foxp2_Foxp3	ENSMUST00000032134.7|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family
mm10_v2_chr11_-_121388186_121388267	0.155219	Foxp2_Foxp3	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr5_+_25246775_25246802	0.155041	Foxp2_Foxp3	ENSMUST00000144971.1|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr3_+_96557950_96557968	0.149222	Foxp2_Foxp3	ENSMUST00000074519.6|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein 	ENSMUST00000049093.7|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein
mm10_v2_chr4_-_138725262_138725267	0.148225	Foxp2_Foxp3	ENSMUST00000105811.2|Ubxn10|ENSMUSG00000043621.7|UBX domain protein 10
mm10_v2_chr4_-_45012093_45012159	0.147854	Foxp2_Foxp3	ENSMUST00000131991.1|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5
mm10_v2_chr2_+_112284561_112284610	0.147456	Foxp2_Foxp3	ENSMUST00000053666.7|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr1_+_16688405_16688458	0.147108	Foxp2_Foxp3	ENSMUST00000026881.4|Ly96|ENSMUSG00000025779.4|lymphocyte antigen 96
mm10_v2_chr15_+_99392948_99393022	0.14637	Foxp2_Foxp3	ENSMUST00000161250.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6 	ENSMUST00000160635.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6 	ENSMUST00000161778.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr10_-_26373956_26374088	0.145979	Foxp2_Foxp3	ENSMUST00000105519.3|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila) 	ENSMUST00000040219.6|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila)
mm10_v2_chr9_+_70679016_70679116	0.1457	Foxp2_Foxp3	ENSMUST00000144537.1|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr18_+_37742088_37742137	0.144437	Foxp2_Foxp3	ENSMUST00000003599.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr1_-_180195981_180196075	0.143659	Foxp2_Foxp3	ENSMUST00000027766.6|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3 	ENSMUST00000161814.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3
mm10_v2_chr8_-_122699066_122699119	0.141766	Foxp2_Foxp3	ENSMUST00000127984.1|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm10_v2_chr2_-_64975762_64975795	0.140792	Foxp2_Foxp3	ENSMUST00000156765.1|Grb14|ENSMUSG00000026888.8|growth factor receptor bound protein 14
mm10_v2_chr9_+_44398176_44398176	0.13848	Foxp2_Foxp3	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr6_-_24527546_24527585	0.136855	Foxp2_Foxp3	ENSMUST00000118558.1|Ndufa5|ENSMUSG00000023089.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm10_v2_chr1_+_66364623_66364663	0.136535	Foxp2_Foxp3	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr14_+_55561060_55561071	0.136057	Foxp2_Foxp3	ENSMUST00000117701.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr13_-_12464925_12464949	0.135679	Foxp2_Foxp3	ENSMUST00000124888.1|Lgals8|ENSMUSG00000057554.7|lectin, galactose binding, soluble 8
mm10_v2_chr11_+_32000452_32000470	0.13506	Foxp2_Foxp3	ENSMUST00000020537.2|Nsg2|ENSMUSG00000020297.4|neuron specific gene family member 2 	ENSMUST00000109409.1|Nsg2|ENSMUSG00000020297.4|neuron specific gene family member 2
mm10_v2_chr12_+_38780817_38780854	0.134552	Foxp2_Foxp3	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr2_-_20943413_20943424	0.133002	Foxp2_Foxp3	ENSMUST00000140230.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr3_+_7366598_7366641	0.132998	Foxp2_Foxp3	ENSMUST00000028999.6|Pkia|ENSMUSG00000027499.7|protein kinase inhibitor, alpha
mm10_v2_chr13_+_75089826_75089886	0.132612	Foxp2_Foxp3	ENSMUST00000022075.4|Pcsk1|ENSMUSG00000021587.4|proprotein convertase subtilisin/kexin type 1
mm10_v2_chr18_-_62756275_62756347	0.131362	Foxp2_Foxp3	ENSMUST00000067450.1|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene 	ENSMUST00000048109.5|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene
mm10_v2_chr8_-_3279606_3279622	0.128361	Foxp2_Foxp3	ENSMUST00000091291.4|Insr|ENSMUSG00000005534.9|insulin receptor
mm10_v2_chr11_+_53567361_53567526	0.128033	Foxp2_Foxp3	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr11_-_106715251_106715394	0.127348	Foxp2_Foxp3	ENSMUST00000080853.4|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000183610.1|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000103069.3|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000106796.2|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1
mm10_v2_chr2_+_68117713_68117713	0.126808	Foxp2_Foxp3	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr11_-_95699143_95699143	0.125161	Foxp2_Foxp3	ENSMUST00000062249.2|Gm9796|ENSMUSG00000045075.2|predicted gene 9796
mm10_v2_chr2_-_71367749_71367797	0.124109	Foxp2_Foxp3	ENSMUST00000151937.1|Slc25a12|ENSMUSG00000027010.10|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm10_v2_chr15_-_33405976_33405976	0.122508	Foxp2_Foxp3	ENSMUST00000079057.6|1700084J12Rik|ENSMUSG00000058101.2|RIKEN cDNA 1700084J12 gene
mm10_v2_chr16_-_44016387_44016436	0.122497	Foxp2_Foxp3	ENSMUST00000036174.3|Gramd1c|ENSMUSG00000036292.7|GRAM domain containing 1C
mm10_v2_chr11_+_85353156_85353219	0.121965	Foxp2_Foxp3	ENSMUST00000108061.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108062.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108056.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000138423.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000074875.4|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000092821.3|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3
mm10_v2_chrX_-_150814265_150814345	0.121783	Foxp2_Foxp3	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr16_+_43364145_43364204	0.120245	Foxp2_Foxp3	ENSMUST00000148775.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr11_+_17051818_17051899	0.119989	Foxp2_Foxp3	ENSMUST00000058159.5|Cnrip1|ENSMUSG00000044629.5|cannabinoid receptor interacting protein 1
mm10_v2_chr14_+_58072686_58072686	0.119931	Foxp2_Foxp3	ENSMUST00000022545.7|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr2_+_3114220_3114225	0.117026	Foxp2_Foxp3	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr9_-_44713196_44713265	0.11652	Foxp2_Foxp3	ENSMUST00000144251.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1 	ENSMUST00000156918.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1
mm10_v2_chr11_-_102556122_102556199	0.116255	Foxp2_Foxp3	ENSMUST00000143842.1|Gpatch8|ENSMUSG00000034621.8|G patch domain containing 8
mm10_v2_chr13_+_46669517_46669545	0.116194	Foxp2_Foxp3	ENSMUST00000099547.3|C78339|ENSMUSG00000069237.8|expressed sequence C78339
mm10_v2_chr11_+_43433720_43433783	0.115359	Foxp2_Foxp3	ENSMUST00000126128.1|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae) 	ENSMUST00000151880.1|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae) 	ENSMUST00000020681.3|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae)
mm10_v2_chr1_+_6487231_6487338	0.114382	Foxp2_Foxp3	ENSMUST00000140079.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131494.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr14_+_11227511_11227552	0.112526	Foxp2_Foxp3	ENSMUST00000080237.3|Rpl21-ps4|ENSMUSG00000072714.1|ribosomal protein L21, pseudogene 4
mm10_v2_chr19_+_53329413_53329478	0.111102	Foxp2_Foxp3	ENSMUST00000025998.7|Mxi1|ENSMUSG00000025025.7|Max interacting protein 1
mm10_v2_chr9_+_108648720_108648840	0.109606	Foxp2_Foxp3	ENSMUST00000098384.2|Gm10621|ENSMUSG00000074075.2|predicted gene 10621
mm10_v2_chr18_+_37333853_37333946	0.108898	Foxp2_Foxp3	ENSMUST00000061717.2|Pcdhb6|ENSMUSG00000051678.3|protocadherin beta 6
mm10_v2_chr10_-_80900749_80900969	0.108015	Foxp2_Foxp3	ENSMUST00000020440.6|Timm13|ENSMUSG00000020219.6|translocase of inner mitochondrial membrane 13
mm10_v2_chr17_+_55445375_55445389	0.106613	Foxp2_Foxp3	ENSMUST00000133899.1|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2 	ENSMUST00000086878.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr3_+_138860489_138860506	0.106329	Foxp2_Foxp3	ENSMUST00000121826.1|Tspan5|ENSMUSG00000028152.4|tetraspanin 5
mm10_v2_chr2_+_181767283_181767322	0.105714	Foxp2_Foxp3	ENSMUST00000108757.2|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr2_+_32151074_32151262	0.105162	Foxp2_Foxp3	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr6_+_116650674_116650690	0.104379	Foxp2_Foxp3	ENSMUST00000067354.5|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene 	ENSMUST00000178241.1|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene
mm10_v2_chr15_+_99393219_99393248	0.104294	Foxp2_Foxp3	ENSMUST00000159209.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr11_+_116434087_116434106	0.101197	Foxp2_Foxp3	ENSMUST00000057676.6|Ubald2|ENSMUSG00000050628.6|UBA-like domain containing 2
mm10_v2_chr2_-_66440753_66440846	0.101068	Foxp2_Foxp3	ENSMUST00000112371.2|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha 	ENSMUST00000138910.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr12_-_84450944_84451018	0.100942	Foxp2_Foxp3	ENSMUST00000085192.5|Aldh6a1|ENSMUSG00000021238.10|aldehyde dehydrogenase family 6, subfamily A1
mm10_v2_chr9_-_71896047_71896102	0.100698	Foxp2_Foxp3	ENSMUST00000184448.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr4_-_143299498_143299564	0.100247	Foxp2_Foxp3	ENSMUST00000030317.7|Pdpn|ENSMUSG00000028583.8|podoplanin
mm10_v2_chr1_-_175688353_175688353	0.0974853	Foxp2_Foxp3	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr16_-_35769356_35769384	0.096982	Foxp2_Foxp3	ENSMUST00000023554.8|Dirc2|ENSMUSG00000022848.8|disrupted in renal carcinoma 2 (human)
mm10_v2_chr19_-_28010995_28011054	0.0968064	Foxp2_Foxp3	ENSMUST00000172907.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression) 	ENSMUST00000046898.9|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr16_+_94425083_94425148	0.0951858	Foxp2_Foxp3	ENSMUST00000141176.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr17_-_34627148_34627191	0.0948926	Foxp2_Foxp3	ENSMUST00000171376.1|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000169287.1|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr6_+_34709610_34709635	0.0947185	Foxp2_Foxp3	ENSMUST00000031775.6|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr8_-_119558718_119558766	0.0941228	Foxp2_Foxp3	ENSMUST00000081381.4|Mbtps1|ENSMUSG00000031835.9|membrane-bound transcription factor peptidase, site 1 	ENSMUST00000098362.3|Mbtps1|ENSMUSG00000031835.9|membrane-bound transcription factor peptidase, site 1
mm10_v2_chr13_-_76018524_76018712	0.0932101	Foxp2_Foxp3	ENSMUST00000050997.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing 	ENSMUST00000179078.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing 	ENSMUST00000167271.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing
mm10_v2_chr19_-_7341848_7341863	0.0926388	Foxp2_Foxp3	ENSMUST00000171393.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chrX_+_159840463_159840481	0.0925425	Foxp2_Foxp3	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr7_+_19291070_19291124	0.0920397	Foxp2_Foxp3	ENSMUST00000108468.3|Rtn2|ENSMUSG00000030401.9|reticulon 2 (Z-band associated protein)
mm10_v2_chr10_+_102158858_102158889	0.0890279	Foxp2_Foxp3	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr11_+_102285161_102285251	0.0890131	Foxp2_Foxp3	ENSMUST00000156326.1|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr9_+_70678950_70679010	0.0885594	Foxp2_Foxp3	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr11_-_110168073_110168196	0.0880715	Foxp2_Foxp3	ENSMUST00000044850.3|Abca9|ENSMUSG00000041797.7|ATP-binding cassette, sub-family A (ABC1), member 9
mm10_v2_chr11_+_87578384_87578470	0.0877539	Foxp2_Foxp3	ENSMUST00000107962.1|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000122067.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr6_-_39557830_39557867	0.087709	Foxp2_Foxp3	ENSMUST00000036877.3|Dennd2a|ENSMUSG00000038456.3|DENN/MADD domain containing 2A 	ENSMUST00000154149.1|Dennd2a|ENSMUSG00000038456.3|DENN/MADD domain containing 2A
mm10_v2_chr12_-_54695885_54695897	0.0873263	Foxp2_Foxp3	ENSMUST00000067272.8|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr13_-_102958084_102958173	0.0871952	Foxp2_Foxp3	ENSMUST00000099202.3|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000172264.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr6_-_106800051_106800095	0.0867192	Foxp2_Foxp3	ENSMUST00000013882.7|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000049675.4|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000113239.3|Crbn|ENSMUSG00000005362.8|cereblon
mm10_v2_chr1_-_180245927_180245955	0.0862981	Foxp2_Foxp3	ENSMUST00000010753.7|Psen2|ENSMUSG00000010609.9|presenilin 2
mm10_v2_chr3_+_19957037_19957073	0.0862614	Foxp2_Foxp3	ENSMUST00000091309.5|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000108329.1|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000003714.6|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr16_+_87354185_87354249	0.0861409	Foxp2_Foxp3	ENSMUST00000054442.4|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000118310.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000120284.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000118115.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm10_v2_chr12_-_54695813_54695828	0.086074	Foxp2_Foxp3	ENSMUST00000110713.3|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr19_-_7483241_7483289	0.0856449	Foxp2_Foxp3	ENSMUST00000025667.6|Rtn3|ENSMUSG00000024758.8|reticulon 3 	ENSMUST00000065304.5|Rtn3|ENSMUSG00000024758.8|reticulon 3 	ENSMUST00000088171.4|Rtn3|ENSMUSG00000024758.8|reticulon 3
mm10_v2_chrX_+_20848543_20848589	0.0856165	Foxp2_Foxp3	ENSMUST00000001155.4|Araf|ENSMUSG00000001127.6|v-raf murine sarcoma 3611 viral oncogene homolog 	ENSMUST00000122312.1|Araf|ENSMUSG00000001127.6|v-raf murine sarcoma 3611 viral oncogene homolog 	ENSMUST00000120356.1|Araf|ENSMUSG00000001127.6|v-raf murine sarcoma 3611 viral oncogene homolog 	ENSMUST00000122850.1|Araf|ENSMUSG00000001127.6|v-raf murine sarcoma 3611 viral oncogene homolog
mm10_v2_chr2_-_102400863_102400970	0.0845002	Foxp2_Foxp3	ENSMUST00000102573.1|Trim44|ENSMUSG00000027189.10|tripartite motif-containing 44
mm10_v2_chr2_+_164833841_164833858	0.084187	Foxp2_Foxp3	ENSMUST00000152721.1|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chr10_+_23894688_23894688	0.0833509	Foxp2_Foxp3	ENSMUST00000041416.7|Vnn1|ENSMUSG00000037440.7|vanin 1
mm10_v2_chr19_-_57182293_57182315	0.0833317	Foxp2_Foxp3	ENSMUST00000133369.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr17_+_46681038_46681184	0.0828442	Foxp2_Foxp3	ENSMUST00000002845.6|Mea1|ENSMUSG00000002768.7|male enhanced antigen 1
mm10_v2_chr15_+_80711292_80711340	0.0820823	Foxp2_Foxp3	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr6_-_99028251_99028313	0.0817182	Foxp2_Foxp3	ENSMUST00000177437.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000177229.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000113321.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000124058.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr17_-_55915870_55915870	0.0811507	Foxp2_Foxp3	ENSMUST00000074828.4|Rpl21-ps6|ENSMUSG00000059912.4|ribosomal protein L21, pseudogene 6
mm10_v2_chr7_-_142372210_142372292	0.0808682	Foxp2_Foxp3	ENSMUST00000084412.5|Ifitm10|ENSMUSG00000045777.8|interferon induced transmembrane protein 10
mm10_v2_chr3_+_32436376_32436376	0.0798625	Foxp2_Foxp3	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr5_-_31047998_31048009	0.0796871	Foxp2_Foxp3	ENSMUST00000114665.1|Slc5a6|ENSMUSG00000006641.6|solute carrier family 5 (sodium-dependent vitamin transporter), member 6 	ENSMUST00000006817.4|Slc5a6|ENSMUSG00000006641.6|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm10_v2_chr1_+_34121250_34121288	0.0793057	Foxp2_Foxp3	ENSMUST00000183006.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr19_-_7341792_7341829	0.0787337	Foxp2_Foxp3	ENSMUST00000164205.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000165286.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000168324.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000032557.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr1_+_55131253_55131302	0.0776586	Foxp2_Foxp3	ENSMUST00000027122.7|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr18_-_37020679_37020679	0.0776136	Foxp2_Foxp3	ENSMUST00000097612.2|Gm10545|ENSMUSG00000073594.2|predicted gene 10545
mm10_v2_chr3_-_144205165_144205220	0.0773735	Foxp2_Foxp3	ENSMUST00000120539.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr16_+_20097554_20097596	0.0770754	Foxp2_Foxp3	ENSMUST00000023509.3|Klhl24|ENSMUSG00000062901.2|kelch-like 24
mm10_v2_chr2_+_3770673_3770708	0.076724	Foxp2_Foxp3	ENSMUST00000177037.1|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr6_+_34598500_34598529	0.0764252	Foxp2_Foxp3	ENSMUST00000079391.3|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000142512.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr19_+_38264761_38264831	0.0764063	Foxp2_Foxp3	ENSMUST00000087252.5|Lgi1|ENSMUSG00000067242.5|leucine-rich repeat LGI family, member 1
mm10_v2_chr5_+_25247344_25247363	0.0760627	Foxp2_Foxp3	ENSMUST00000114950.1|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr9_+_87015537_87015537	0.0750314	Foxp2_Foxp3	ENSMUST00000058846.4|Ripply2|ENSMUSG00000047897.4|ripply2 homolog (zebrafish)
mm10_v2_chr6_-_52640303_52640389	0.0741533	Foxp2_Foxp3	ENSMUST00000031788.8|Hibadh|ENSMUSG00000029776.10|3-hydroxyisobutyrate dehydrogenase
mm10_v2_chr19_+_44992127_44992136	0.0740807	Foxp2_Foxp3	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr12_+_105563123_105563172	0.0740339	Foxp2_Foxp3	ENSMUST00000001652.5|Bdkrb2|ENSMUSG00000021070.5|bradykinin receptor, beta 2
mm10_v2_chr6_-_29212240_29212297	0.0739453	Foxp2_Foxp3	ENSMUST00000160878.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1 	ENSMUST00000078155.5|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1
mm10_v2_chr16_-_89508313_89508327	0.0738519	Foxp2_Foxp3	ENSMUST00000056118.2|Krtap7-1|ENSMUSG00000056706.2|keratin associated protein 7-1
mm10_v2_chr11_-_50210765_50210827	0.0734	Foxp2_Foxp3	ENSMUST00000143379.1|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000015981.5|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000102774.4|Sqstm1|ENSMUSG00000015837.9|sequestosome 1
mm10_v2_chr2_-_154613425_154613444	0.073204	Foxp2_Foxp3	ENSMUST00000181369.1|4930519P11Rik|ENSMUSG00000097602.1|RIKEN cDNA 4930519P11 gene
mm10_v2_chr3_+_102010138_102010171	0.0731946	Foxp2_Foxp3	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr1_+_180101144_180101144	0.0729725	Foxp2_Foxp3	ENSMUST00000133890.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr17_+_84957993_84958018	0.0729114	Foxp2_Foxp3	ENSMUST00000080217.6|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform 	ENSMUST00000112304.2|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform
mm10_v2_chr2_-_33431324_33431324	0.0726022	Foxp2_Foxp3	ENSMUST00000113158.1|Zbtb34|ENSMUSG00000068966.4|zinc finger and BTB domain containing 34
mm10_v2_chrX_+_94234594_94234604	0.0723715	Foxp2_Foxp3	ENSMUST00000153900.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr10_+_22645011_22645109	0.0713376	Foxp2_Foxp3	ENSMUST00000042261.4|Slc2a12|ENSMUSG00000037490.5|solute carrier family 2 (facilitated glucose transporter), member 12
mm10_v2_chr2_-_72986716_72986716	0.0709584	Foxp2_Foxp3	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr1_+_110099295_110099295	0.0689743	Foxp2_Foxp3	ENSMUST00000134301.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr12_-_54695829_54695884	0.0689669	Foxp2_Foxp3	ENSMUST00000162106.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000160085.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000161592.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000163433.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr11_-_107348130_107348179	0.0685627	Foxp2_Foxp3	ENSMUST00000134763.1|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr10_-_67285180_67285316	0.0674953	Foxp2_Foxp3	ENSMUST00000159002.1|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2 	ENSMUST00000077839.6|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2
mm10_v2_chr7_+_64287665_64287676	0.0674644	Foxp2_Foxp3	ENSMUST00000032736.4|Mtmr10|ENSMUSG00000030522.8|myotubularin related protein 10
mm10_v2_chr11_+_3330781_3330812	0.067419	Foxp2_Foxp3	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr12_+_118846329_118846329	0.066981	Foxp2_Foxp3	ENSMUST00000063918.2|Sp8|ENSMUSG00000048562.6|trans-acting transcription factor 8
mm10_v2_chr5_-_115098295_115098295	0.0661866	Foxp2_Foxp3	ENSMUST00000100848.2|Gm10401|ENSMUSG00000072693.2|predicted gene 10401
mm10_v2_chr17_-_65884902_65884937	0.0661101	Foxp2_Foxp3	ENSMUST00000024905.9|Ralbp1|ENSMUSG00000024096.10|ralA binding protein 1
mm10_v2_chr6_-_88874045_88874070	0.0658791	Foxp2_Foxp3	ENSMUST00000038409.5|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr10_-_128696257_128696273	0.0655834	Foxp2_Foxp3	ENSMUST00000000727.2|Rab5b|ENSMUSG00000000711.2|RAB5B, member RAS oncogene family
mm10_v2_chr2_-_121271315_121271322	0.0654547	Foxp2_Foxp3	ENSMUST00000131245.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr15_-_53346118_53346169	0.065395	Foxp2_Foxp3	ENSMUST00000077273.2|Ext1|ENSMUSG00000061731.3|exostoses (multiple) 1
mm10_v2_chr5_-_31048014_31048079	0.0649888	Foxp2_Foxp3	ENSMUST00000137223.1|Slc5a6|ENSMUSG00000006641.6|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm10_v2_chr1_+_66468364_66468435	0.0649214	Foxp2_Foxp3	ENSMUST00000061620.9|Unc80|ENSMUSG00000055567.10|unc-80 homolog (C. elegans)
mm10_v2_chr4_-_108833544_108833597	0.0649134	Foxp2_Foxp3	ENSMUST00000102740.1|Btf3l4|ENSMUSG00000028568.10|basic transcription factor 3-like 4 	ENSMUST00000102741.1|Btf3l4|ENSMUSG00000028568.10|basic transcription factor 3-like 4
mm10_v2_chr12_-_86884808_86884842	0.0648601	Foxp2_Foxp3	ENSMUST00000038422.6|Irf2bpl|ENSMUSG00000034168.6|interferon regulatory factor 2 binding protein-like
mm10_v2_chr11_+_110968016_110968042	0.0647934	Foxp2_Foxp3	ENSMUST00000106636.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENSMUST00000180023.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr12_+_3954943_3954957	0.063858	Foxp2_Foxp3	ENSMUST00000020990.5|Pomc|ENSMUSG00000020660.5|pro-opiomelanocortin-alpha
mm10_v2_chr19_+_26623419_26623471	0.063752	Foxp2_Foxp3	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr4_-_43653542_43653557	0.0637339	Foxp2_Foxp3	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr13_-_107890059_107890073	0.0633076	Foxp2_Foxp3	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr2_-_73312701_73312724	0.0630375	Foxp2_Foxp3	ENSMUST00000058615.9|Cir1|ENSMUSG00000041777.11|corepressor interacting with RBPJ, 1
mm10_v2_chr19_+_42090422_42090502	0.0628477	Foxp2_Foxp3	ENSMUST00000066778.4|Pi4k2a|ENSMUSG00000025178.8|phosphatidylinositol 4-kinase type 2 alpha
mm10_v2_chr2_-_104028287_104028337	0.0622318	Foxp2_Foxp3	ENSMUST00000056170.3|4931422A03Rik|ENSMUSG00000046085.7|RIKEN cDNA 4931422A03 gene
mm10_v2_chr12_+_38783455_38783482	0.0621712	Foxp2_Foxp3	ENSMUST00000161980.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160701.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr2_+_164833781_164833815	0.0619014	Foxp2_Foxp3	ENSMUST00000143780.1|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chrX_+_38600626_38600691	0.0615527	Foxp2_Foxp3	ENSMUST00000000365.2|Mcts1|ENSMUSG00000000355.7|malignant T cell amplified sequence 1
mm10_v2_chr6_+_34598530_34598587	0.0614926	Foxp2_Foxp3	ENSMUST00000115027.1|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000115026.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr1_+_132506230_132506259	0.0612291	Foxp2_Foxp3	ENSMUST00000058167.1|Tmem81|ENSMUSG00000048174.1|transmembrane protein 81
mm10_v2_chr2_+_181767040_181767073	0.0604811	Foxp2_Foxp3	ENSMUST00000108756.1|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr15_+_59648350_59648369	0.0604528	Foxp2_Foxp3	ENSMUST00000067543.6|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
mm10_v2_chr7_-_12422488_12422488	0.0592547	Foxp2_Foxp3	ENSMUST00000120220.1|Zfp551|ENSMUSG00000034071.8|zinc fingr protein 551
mm10_v2_chr13_-_93499803_93499825	0.0591952	Foxp2_Foxp3	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr7_+_119900099_119900108	0.0590448	Foxp2_Foxp3	ENSMUST00000106516.1|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1
mm10_v2_chr7_-_12422751_12422751	0.0583316	Foxp2_Foxp3	ENSMUST00000080348.5|Zfp551|ENSMUSG00000034071.8|zinc fingr protein 551
mm10_v2_chr7_+_126776939_126777213	0.0581824	Foxp2_Foxp3	ENSMUST00000038614.5|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000170882.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106359.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106357.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000145762.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000132643.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106356.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila)
mm10_v2_chr2_-_121271341_121271397	0.0576549	Foxp2_Foxp3	ENSMUST00000110647.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr9_-_45955226_45955250	0.0567305	Foxp2_Foxp3	ENSMUST00000038488.9|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr8_-_84237042_84237061	0.056344	Foxp2_Foxp3	ENSMUST00000039480.5|Zswim4|ENSMUSG00000035671.5|zinc finger SWIM-type containing 4
mm10_v2_chr10_-_20725023_20725078	0.0556206	Foxp2_Foxp3	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr11_-_106789157_106789192	0.0549333	Foxp2_Foxp3	ENSMUST00000129585.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chrX_-_104671048_104671071	0.0535764	Foxp2_Foxp3	ENSMUST00000042070.5|Zdhhc15|ENSMUSG00000033906.5|zinc finger, DHHC domain containing 15
mm10_v2_chr14_-_52213379_52213379	0.0535157	Foxp2_Foxp3	ENSMUST00000140603.1|Chd8|ENSMUSG00000053754.7|chromodomain helicase DNA binding protein 8
mm10_v2_chr9_+_57910974_57911023	0.0531812	Foxp2_Foxp3	ENSMUST00000163329.1|Ubl7|ENSMUSG00000055720.9|ubiquitin-like 7 (bone marrow stromal cell-derived)
mm10_v2_chr14_+_120275669_120275714	0.0526861	Foxp2_Foxp3	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr1_+_75549581_75549626	0.0523013	Foxp2_Foxp3	ENSMUST00000154101.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr3_+_76593550_76593550	0.0520738	Foxp2_Foxp3	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chrX_+_151521146_151521206	0.05202	Foxp2_Foxp3	ENSMUST00000112670.1|Phf8|ENSMUSG00000041229.9|PHD finger protein 8 	ENSMUST00000046962.4|Phf8|ENSMUSG00000041229.9|PHD finger protein 8 	ENSMUST00000112668.2|Phf8|ENSMUSG00000041229.9|PHD finger protein 8 	ENSMUST00000046950.6|Phf8|ENSMUSG00000041229.9|PHD finger protein 8
mm10_v2_chr19_-_28011138_28011181	0.0519859	Foxp2_Foxp3	ENSMUST00000174850.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr13_+_118714678_118714701	0.0516462	Foxp2_Foxp3	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr1_-_180245757_180245911	0.0510355	Foxp2_Foxp3	ENSMUST00000111104.1|Psen2|ENSMUSG00000010609.9|presenilin 2
mm10_v2_chr19_+_23141183_23141263	0.0507095	Foxp2_Foxp3	ENSMUST00000036884.1|Klf9|ENSMUSG00000033863.1|Kruppel-like factor 9
mm10_v2_chr5_-_34187670_34187749	0.0497676	Foxp2_Foxp3	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chrX_-_101222426_101222563	0.0491609	Foxp2_Foxp3	ENSMUST00000120389.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000156473.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000077876.3|Snx12|ENSMUSG00000046032.10|sorting nexin 12
mm10_v2_chr10_+_39420009_39420074	0.0491475	Foxp2_Foxp3	ENSMUST00000157009.1|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene
mm10_v2_chr19_-_7206234_7206316	0.0484072	Foxp2_Foxp3	ENSMUST00000123594.1|Otub1|ENSMUSG00000024767.5|OTU domain, ubiquitin aldehyde binding 1 	ENSMUST00000025679.4|Otub1|ENSMUSG00000024767.5|OTU domain, ubiquitin aldehyde binding 1
mm10_v2_chr13_-_18031616_18031629	0.0482418	Foxp2_Foxp3	ENSMUST00000099736.2|Vdac3-ps1|ENSMUSG00000075053.2|voltage-dependent anion channel 3, pseudogene 1
mm10_v2_chr15_-_98918131_98918231	0.0477835	Foxp2_Foxp3	ENSMUST00000023736.8|Lmbr1l|ENSMUSG00000022999.8|limb region 1 like
mm10_v2_chr8_+_86745679_86745699	0.0476785	Foxp2_Foxp3	ENSMUST00000098532.2|Gm10638|ENSMUSG00000074178.2|predicted gene 10638
mm10_v2_chr8_+_25720054_25720099	0.0473011	Foxp2_Foxp3	ENSMUST00000068916.8|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B 	ENSMUST00000139836.1|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B
mm10_v2_chr12_+_38783503_38783527	0.0465594	Foxp2_Foxp3	ENSMUST00000159334.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr19_-_46962301_46962351	0.0463659	Foxp2_Foxp3	ENSMUST00000168536.1|Nt5c2|ENSMUSG00000025041.10|5'-nucleotidase, cytosolic II
mm10_v2_chr8_+_25911670_25911692	0.0462124	Foxp2_Foxp3	ENSMUST00000120653.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1 	ENSMUST00000126226.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1
mm10_v2_chr4_-_59549243_59549303	0.0444133	Foxp2_Foxp3	ENSMUST00000173699.1|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000173884.1|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000102883.4|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000174586.1|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3
mm10_v2_chr13_+_55209776_55209788	0.0443737	Foxp2_Foxp3	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr7_+_141061274_141061311	0.0440086	Foxp2_Foxp3	ENSMUST00000048002.5|B4galnt4|ENSMUSG00000055629.4|beta-1,4-N-acetyl-galactosaminyl transferase 4
mm10_v2_chr1_-_4496363_4496389	0.0435522	Foxp2_Foxp3	ENSMUST00000116652.2|Sox17|ENSMUSG00000025902.7|SRY-box containing gene 17
mm10_v2_chr2_+_166792525_166792536	0.0432651	Foxp2_Foxp3	ENSMUST00000065753.1|Trp53rk|ENSMUSG00000042854.9|transformation related protein 53 regulating kinase
mm10_v2_chr6_-_29609811_29609887	0.0416882	Foxp2_Foxp3	ENSMUST00000012679.8|Tnpo3|ENSMUSG00000012535.8|transportin 3
mm10_v2_chr1_+_55131317_55131331	0.0415953	Foxp2_Foxp3	ENSMUST00000162553.1|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr13_-_102906046_102906111	0.0415634	Foxp2_Foxp3	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr2_+_173737492_173737511	0.0412807	Foxp2_Foxp3	ENSMUST00000067530.4|Vapb|ENSMUSG00000054455.4|vesicle-associated membrane protein, associated protein B and C
mm10_v2_chr2_+_155751117_155751284	0.0410008	Foxp2_Foxp3	ENSMUST00000029140.5|Procr|ENSMUSG00000027611.6|protein C receptor, endothelial 	ENSMUST00000132608.1|Procr|ENSMUSG00000027611.6|protein C receptor, endothelial
mm10_v2_chr14_-_45388772_45388836	0.0395566	Foxp2_Foxp3	ENSMUST00000046191.7|Gnpnat1|ENSMUSG00000037722.7|glucosamine-phosphate N-acetyltransferase 1
mm10_v2_chr12_-_31499541_31499616	0.0392948	Foxp2_Foxp3	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr13_+_63282142_63282142	0.038863	Foxp2_Foxp3	ENSMUST00000159152.1|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr19_+_46623387_46623451	0.0386225	Foxp2_Foxp3	ENSMUST00000111855.4|Wbp1l|ENSMUSG00000047731.11|WW domain binding protein 1 like
mm10_v2_chr10_-_39122277_39122314	0.03796	Foxp2_Foxp3	ENSMUST00000136546.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr9_-_103230262_103230307	0.0378827	Foxp2_Foxp3	ENSMUST00000165296.1|Trf|ENSMUSG00000032554.9|transferrin 	ENSMUST00000112645.1|Trf|ENSMUSG00000032554.9|transferrin 	ENSMUST00000166836.1|Gm20425|ENSMUSG00000090639.1|predicted gene 20425
mm10_v2_chr4_-_133339238_133339271	0.036971	Foxp2_Foxp3	ENSMUST00000105906.1|Wdtc1|ENSMUSG00000037622.8|WD and tetratricopeptide repeats 1
mm10_v2_chr4_-_133339283_133339334	0.0363549	Foxp2_Foxp3	ENSMUST00000043305.7|Wdtc1|ENSMUSG00000037622.8|WD and tetratricopeptide repeats 1
mm10_v2_chr1_-_75142360_75142424	0.0361748	Foxp2_Foxp3	ENSMUST00000041213.5|Cnppd1|ENSMUSG00000033159.8|cyclin Pas1/PHO80 domain containing 1
mm10_v2_chr7_-_29505447_29505473	0.0361539	Foxp2_Foxp3	ENSMUST00000183096.1|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3 	ENSMUST00000085809.4|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3
mm10_v2_chr7_-_62420139_62420157	0.0358287	Foxp2_Foxp3	ENSMUST00000094340.3|Mkrn3|ENSMUSG00000070527.3|makorin, ring finger protein, 3
mm10_v2_chr13_-_90905321_90905355	0.0352516	Foxp2_Foxp3	ENSMUST00000109541.3|Atp6ap1l|ENSMUSG00000078958.3|ATPase, H+ transporting, lysosomal accessory protein 1-like
mm10_v2_chr16_-_91069142_91069159	0.0350453	Foxp2_Foxp3	ENSMUST00000035689.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene 	ENSMUST00000114076.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene
mm10_v2_chr2_+_91730127_91730225	0.0347493	Foxp2_Foxp3	ENSMUST00000099712.3|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111317.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111316.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000045705.7|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1
mm10_v2_chr11_-_106788486_106788532	0.0341764	Foxp2_Foxp3	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr10_-_117292863_117292870	0.0332612	Foxp2_Foxp3	ENSMUST00000092162.5|Lyz1|ENSMUSG00000069515.5|lysozyme 1
mm10_v2_chrX_+_20662898_20662909	0.0325844	Foxp2_Foxp3	ENSMUST00000001989.8|Uba1|ENSMUSG00000001924.9|ubiquitin-like modifier activating enzyme 1
mm10_v2_chr1_-_4496400_4496420	0.0322678	Foxp2_Foxp3	ENSMUST00000027035.3|Sox17|ENSMUSG00000025902.7|SRY-box containing gene 17
mm10_v2_chr11_+_100622870_100622881	0.0320971	Foxp2_Foxp3	ENSMUST00000017981.3|Nkiras2|ENSMUSG00000017837.6|NFKB inhibitor interacting Ras-like protein 2
mm10_v2_chr1_+_60181495_60181591	0.0317023	Foxp2_Foxp3	ENSMUST00000160834.1|Nbeal1|ENSMUSG00000073664.5|neurobeachin like 1
mm10_v2_chr17_+_34031787_34031821	0.0314503	Foxp2_Foxp3	ENSMUST00000044858.8|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta
mm10_v2_chr12_-_76962178_76962248	0.0310597	Foxp2_Foxp3	ENSMUST00000110395.3|Max|ENSMUSG00000059436.6|Max protein 	ENSMUST00000082136.5|Max|ENSMUSG00000059436.6|Max protein
mm10_v2_chr11_+_32276400_32276400	0.0308688	Foxp2_Foxp3	ENSMUST00000020531.2|Hba-x|ENSMUSG00000055609.2|hemoglobin X, alpha-like embryonic chain in Hba complex
mm10_v2_chr4_+_43669610_43669678	0.030132	Foxp2_Foxp3	ENSMUST00000107866.1|Tmem8b|ENSMUSG00000078716.3|transmembrane protein 8B
mm10_v2_chr2_-_15049254_15049339	0.0301301	Foxp2_Foxp3	ENSMUST00000028034.8|Nsun6|ENSMUSG00000026707.9|NOL1/NOP2/Sun domain family member 6 	ENSMUST00000114713.1|Nsun6|ENSMUSG00000026707.9|NOL1/NOP2/Sun domain family member 6
mm10_v2_chr18_-_37644185_37644209	0.0299745	Foxp2_Foxp3	ENSMUST00000066272.4|Taf7|ENSMUSG00000051316.7|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr3_+_84925476_84925488	0.0298816	Foxp2_Foxp3	ENSMUST00000107675.1|Fbxw7|ENSMUSG00000028086.8|F-box and WD-40 domain protein 7
mm10_v2_chr6_-_29609607_29609642	0.0298057	Foxp2_Foxp3	ENSMUST00000115251.1|Tnpo3|ENSMUSG00000012535.8|transportin 3
mm10_v2_chrX_+_7722267_7722362	0.0297092	Foxp2_Foxp3	ENSMUST00000125991.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000148624.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45
mm10_v2_chr8_-_69887687_69887687	0.0281575	Foxp2_Foxp3	ENSMUST00000057831.7|Cilp2|ENSMUSG00000044006.8|cartilage intermediate layer protein 2
mm10_v2_chr17_+_34032071_34032196	0.0272322	Foxp2_Foxp3	ENSMUST00000174299.1|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta 	ENSMUST00000173554.1|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta
mm10_v2_chr4_+_48663502_48663525	0.0269842	Foxp2_Foxp3	ENSMUST00000030033.4|Murc|ENSMUSG00000028348.7|muscle-related coiled-coil protein
mm10_v2_chr8_+_70724064_70724078	0.0269277	Foxp2_Foxp3	ENSMUST00000034307.7|Pde4c|ENSMUSG00000031842.7|phosphodiesterase 4C, cAMP specific 	ENSMUST00000110095.2|Pde4c|ENSMUSG00000031842.7|phosphodiesterase 4C, cAMP specific
mm10_v2_chr3_+_51693771_51693771	0.0257247	Foxp2_Foxp3	ENSMUST00000099104.2|Gm10729|ENSMUSG00000074603.2|predicted gene 10729
mm10_v2_chr6_-_88874597_88874796	0.0247368	Foxp2_Foxp3	ENSMUST00000061262.4|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2 	ENSMUST00000140455.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2 	ENSMUST00000145780.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr12_+_3365108_3365142	0.0242422	Foxp2_Foxp3	ENSMUST00000020999.5|Kif3c|ENSMUSG00000020668.9|kinesin family member 3C
mm10_v2_chr7_+_44849216_44849295	0.0241985	Foxp2_Foxp3	ENSMUST00000054343.8|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr11_+_120232921_120232952	0.0226736	Foxp2_Foxp3	ENSMUST00000122148.1|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1 	ENSMUST00000044985.7|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1
mm10_v2_chr17_-_34627365_34627525	0.0226491	Foxp2_Foxp3	ENSMUST00000064953.8|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000170345.1|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000171121.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000168391.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000169067.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr19_-_7341433_7341647	0.022194	Foxp2_Foxp3	ENSMUST00000165965.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000051711.9|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000169541.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000165989.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chrX_+_68678624_68678639	0.0221311	Foxp2_Foxp3	ENSMUST00000114656.1|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chrX_+_94234921_94234972	0.021662	Foxp2_Foxp3	ENSMUST00000113908.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15 	ENSMUST00000113916.3|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr11_-_96829483_96829502	0.0216581	Foxp2_Foxp3	ENSMUST00000167149.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1
mm10_v2_chr11_+_83473079_83473123	0.0215109	Foxp2_Foxp3	ENSMUST00000021018.4|Taf15|ENSMUSG00000020680.9|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr2_-_37647199_37647285	0.0210148	Foxp2_Foxp3	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr7_-_29906087_29906137	0.0209983	Foxp2_Foxp3	ENSMUST00000053521.8|Zfp27|ENSMUSG00000062040.8|zinc finger protein 27
mm10_v2_chr2_+_69722797_69722840	0.0205599	Foxp2_Foxp3	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr11_+_3289880_3289993	0.0199391	Foxp2_Foxp3	ENSMUST00000110043.1|Patz1|ENSMUSG00000020453.11|POZ (BTB) and AT hook containing zinc finger 1 	ENSMUST00000094471.3|Patz1|ENSMUSG00000020453.11|POZ (BTB) and AT hook containing zinc finger 1
mm10_v2_chr8_-_71511762_71511778	0.0194098	Foxp2_Foxp3	ENSMUST00000048452.4|Plvap|ENSMUSG00000034845.5|plasmalemma vesicle associated protein
mm10_v2_chr18_+_31609512_31609512	0.0185715	Foxp2_Foxp3	ENSMUST00000164667.1|B930094E09Rik|ENSMUSG00000092124.1|RIKEN cDNA B930094E09 gene
mm10_v2_chr13_+_104178797_104178872	0.0183481	Foxp2_Foxp3	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr2_+_15049395_15049447	0.0182315	Foxp2_Foxp3	ENSMUST00000017562.6|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr9_-_36797273_36797293	0.0175044	Foxp2_Foxp3	ENSMUST00000163192.3|Ei24|ENSMUSG00000062762.9|etoposide induced 2.4 mRNA
mm10_v2_chr6_+_34709442_34709497	0.0170394	Foxp2_Foxp3	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr5_-_24995748_24995759	0.0169451	Foxp2_Foxp3	ENSMUST00000076306.5|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr7_+_44848991_44849114	0.0163785	Foxp2_Foxp3	ENSMUST00000107885.1|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr6_-_30693676_30693749	0.0156428	Foxp2_Foxp3	ENSMUST00000169422.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115131.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115130.2|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000031810.8|Cep41|ENSMUSG00000029790.10|centrosomal protein 41
mm10_v2_chr4_+_11191354_11191424	0.0148084	Foxp2_Foxp3	ENSMUST00000170901.1|Ccne2|ENSMUSG00000028212.10|cyclin E2
mm10_v2_chr11_+_107547925_107547968	0.014197	Foxp2_Foxp3	ENSMUST00000100305.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000075012.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000106746.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain
mm10_v2_chr11_-_106788845_106788883	0.0141285	Foxp2_Foxp3	ENSMUST00000123339.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr2_+_143915273_143915337	0.0136991	Foxp2_Foxp3	ENSMUST00000103172.3|Dstn|ENSMUSG00000015932.8|destrin
mm10_v2_chr3_-_152193803_152193831	0.0127843	Foxp2_Foxp3	ENSMUST00000050073.6|Dnajb4|ENSMUSG00000028035.7|DnaJ (Hsp40) homolog, subfamily B, member 4
mm10_v2_chr17_-_46680870_46680933	0.012055	Foxp2_Foxp3	ENSMUST00000165007.1|Klhdc3|ENSMUSG00000063576.5|kelch domain containing 3 	ENSMUST00000071841.5|Klhdc3|ENSMUSG00000063576.5|kelch domain containing 3
mm10_v2_chr3_+_97901190_97901250	0.0119542	Foxp2_Foxp3	ENSMUST00000029476.2|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) 	ENSMUST00000122288.1|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
mm10_v2_chr17_+_9422060_9422060	0.0115973	Foxp2_Foxp3	ENSMUST00000076982.6|Gm17728|ENSMUSG00000072968.4|predicted gene, 17728
mm10_v2_chr11_+_78176711_78176761	0.0115383	Foxp2_Foxp3	ENSMUST00000098545.5|Tlcd1|ENSMUSG00000019437.11|TLC domain containing 1
mm10_v2_chr1_+_109983737_109983737	0.0110575	Foxp2_Foxp3	ENSMUST00000172005.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr5_+_33018816_33018865	0.0109593	Foxp2_Foxp3	ENSMUST00000019109.7|Ywhah|ENSMUSG00000018965.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm10_v2_chr11_-_106920359_106920643	0.0105499	Foxp2_Foxp3	ENSMUST00000167787.1|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2 	ENSMUST00000092517.2|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2
mm10_v2_chr11_+_85311232_85311286	0.0103142	Foxp2_Foxp3	ENSMUST00000020835.9|Ppm1d|ENSMUSG00000020525.11|protein phosphatase 1D magnesium-dependent, delta isoform
mm10_v2_chr11_+_87737530_87737566	0.0094566	Foxp2_Foxp3	ENSMUST00000093955.5|Supt4a|ENSMUSG00000020485.8|suppressor of Ty 4A
mm10_v2_chr2_+_176236860_176236860	0.00931282	Foxp2_Foxp3	ENSMUST00000166464.1|2210418O10Rik|ENSMUSG00000078894.3|RIKEN cDNA 2210418O10 gene
mm10_v2_chr7_-_102065044_102065159	0.00896738	Foxp2_Foxp3	ENSMUST00000130074.1|Rnf121|ENSMUSG00000070426.6|ring finger protein 121 	ENSMUST00000131104.1|Rnf121|ENSMUSG00000070426.6|ring finger protein 121 	ENSMUST00000096639.5|Rnf121|ENSMUSG00000070426.6|ring finger protein 121
mm10_v2_chr19_+_8741669_8741811	0.00789345	Foxp2_Foxp3	ENSMUST00000176314.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A 	ENSMUST00000073430.7|Stx5a|ENSMUSG00000010110.11|syntaxin 5A 	ENSMUST00000175901.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr11_+_3330401_3330541	0.00768323	Foxp2_Foxp3	ENSMUST00000045153.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr6_-_59024470_59024549	0.00731003	Foxp2_Foxp3	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr9_-_40455670_40455777	0.00710909	Foxp2_Foxp3	ENSMUST00000165104.1|Gramd1b|ENSMUSG00000040111.8|GRAM domain containing 1B 	ENSMUST00000045682.5|Gramd1b|ENSMUSG00000040111.8|GRAM domain containing 1B
mm10_v2_chr8_+_31111816_31111891	0.00629486	Foxp2_Foxp3	ENSMUST00000046941.7|Rnf122|ENSMUSG00000039328.9|ring finger protein 122
mm10_v2_chr2_-_175131864_175131864	0.00616002	Foxp2_Foxp3	ENSMUST00000108929.2|Gm14399|ENSMUSG00000090093.2|predicted gene 14399
mm10_v2_chr2_+_145785980_145786152	0.006157	Foxp2_Foxp3	ENSMUST00000110005.1|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2 	ENSMUST00000094480.4|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2
mm10_v2_chr1_+_134415414_134415504	0.00613592	Foxp2_Foxp3	ENSMUST00000112237.1|Adipor1|ENSMUSG00000026457.8|adiponectin receptor 1
mm10_v2_chrX_+_94234982_94234997	0.00577836	Foxp2_Foxp3	ENSMUST00000096369.3|Klhl15|ENSMUSG00000043929.10|kelch-like 15 	ENSMUST00000113911.2|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr19_+_8741473_8741503	0.00565907	Foxp2_Foxp3	ENSMUST00000177373.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A 	ENSMUST00000010254.9|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr1_+_134415378_134415395	0.00564816	Foxp2_Foxp3	ENSMUST00000027727.8|Adipor1|ENSMUSG00000026457.8|adiponectin receptor 1
mm10_v2_chr19_+_6046576_6046662	0.00518066	Foxp2_Foxp3	ENSMUST00000138532.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000129081.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000156550.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr5_-_38491948_38491961	0.00499338	Foxp2_Foxp3	ENSMUST00000129099.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chr14_-_68655804_68655842	0.00434663	Foxp2_Foxp3	ENSMUST00000111072.1|Adam28|ENSMUSG00000014725.8|a disintegrin and metallopeptidase domain 28 	ENSMUST00000022642.5|Adam28|ENSMUSG00000014725.8|a disintegrin and metallopeptidase domain 28
mm10_v2_chr14_-_41008256_41008275	0.00357667	Foxp2_Foxp3	ENSMUST00000136661.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chrX_+_68678541_68678554	0.00203787	Foxp2_Foxp3	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr5_+_142629537_142629593	0.00194982	Foxp2_Foxp3	ENSMUST00000036872.9|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2 	ENSMUST00000110778.1|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2
mm10_v2_chrX_+_35888808_35888859	0.00188108	Foxp2_Foxp3	ENSMUST00000033419.6|Dock11|ENSMUSG00000031093.8|dedicator of cytokinesis 11
mm10_v2_chr15_+_89059712_89059760	0.00139712	Foxp2_Foxp3	ENSMUST00000161372.1|Panx2|ENSMUSG00000058441.7|pannexin 2 	ENSMUST00000162424.1|Panx2|ENSMUSG00000058441.7|pannexin 2
mm10_v2_chr7_+_140763739_140763828	0.000764222	Foxp2_Foxp3	ENSMUST00000026552.7|Cyp2e1|ENSMUSG00000025479.8|cytochrome P450, family 2, subfamily e, polypeptide 1
mm10_v2_chr12_+_72761211_72761265	0.000289108	Foxp2_Foxp3	ENSMUST00000021514.8|Ppm1a|ENSMUSG00000021096.10|protein phosphatase 1A, magnesium dependent, alpha isoform
