mm10_v2_chr1_+_45981548_45981548	3.14891	Hmga1	ENSMUST00000085632.2|Rpl23a-ps1|ENSMUSG00000070896.1|ribosomal protein 23A, pseudogene 1
mm10_v2_chr13_-_85127514_85127514	3.10389	Hmga1	ENSMUST00000179230.1|Gm4076|ENSMUSG00000096449.1|predicted gene 4076
mm10_v2_chr4_+_105789869_105789869	2.48137	Hmga1	ENSMUST00000184254.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr10_+_96136603_96136603	2.19223	Hmga1	ENSMUST00000074615.6|Gm5426|ENSMUSG00000096486.1|predicted pseudogene 5426
mm10_v2_chrX_-_103483205_103483225	2.18871	Hmga1	ENSMUST00000127786.2|Xist|ENSMUSG00000086503.2|inactive X specific transcripts
mm10_v2_chr3_-_88577208_88577208	1.90534	Hmga1	ENSMUST00000098952.2|Gm10704|ENSMUSG00000074479.2|predicted pseudogene 10704
mm10_v2_chr15_+_99006056_99006056	1.86144	Hmga1	ENSMUST00000079818.3|Gm8973|ENSMUSG00000064081.3|predicted gene 8973
mm10_v2_chr15_+_31276491_31276491	1.44945	Hmga1	ENSMUST00000068987.5|Fam136b-ps|ENSMUSG00000055416.5|family with sequence similarity 136, member B, pseudogene
mm10_v2_chr13_-_41273977_41273977	1.35939	Hmga1	ENSMUST00000163881.1|Gm17364|ENSMUSG00000090853.1|predicted gene, 17364
mm10_v2_chr10_+_4611971_4612021	1.15007	Hmga1	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr18_+_35770318_35770318	0.809817	Hmga1	ENSMUST00000165299.1|Gm16490|ENSMUSG00000091842.1|predicted gene 16490
mm10_v2_chr16_-_36784924_36784971	0.770263	Hmga1	ENSMUST00000168279.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2 	ENSMUST00000164579.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2 	ENSMUST00000023616.2|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2
mm10_v2_chrX_+_166344692_166344770	0.703754	Hmga1	ENSMUST00000112223.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112224.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112229.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112228.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112227.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112226.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr3_-_121171678_121171717	0.690089	Hmga1	ENSMUST00000170781.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000039761.5|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106467.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106466.3|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000164925.2|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3
mm10_v2_chr17_+_85620816_85620843	0.670154	Hmga1	ENSMUST00000175898.2|Six3|ENSMUSG00000038805.9|sine oculis-related homeobox 3
mm10_v2_chr17_+_3397189_3397207	0.661284	Hmga1	ENSMUST00000072156.6|Tiam2|ENSMUSG00000023800.8|T cell lymphoma invasion and metastasis 2
mm10_v2_chr7_+_34251038_34251038	0.660121	Hmga1	ENSMUST00000105172.1|Gm6096|ENSMUSG00000078380.1|predicted gene 6096
mm10_v2_chr1_+_180101144_180101144	0.64702	Hmga1	ENSMUST00000133890.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr5_+_17574726_17574899	0.638102	Hmga1	ENSMUST00000169603.1|Sema3c|ENSMUSG00000028780.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm10_v2_chrX_-_93632113_93632186	0.57473	Hmga1	ENSMUST00000006856.2|Pola1|ENSMUSG00000006678.6|polymerase (DNA directed), alpha 1
mm10_v2_chr12_+_52699297_52699411	0.565197	Hmga1	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr5_+_66745835_66745896	0.543206	Hmga1	ENSMUST00000101164.4|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1 	ENSMUST00000118242.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1 	ENSMUST00000119854.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1 	ENSMUST00000117601.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr2_-_62483637_62483653	0.543093	Hmga1	ENSMUST00000136686.1|Gcg|ENSMUSG00000000394.9|glucagon 	ENSMUST00000102733.3|Gcg|ENSMUSG00000000394.9|glucagon
mm10_v2_chr9_+_120929216_120929251	0.538542	Hmga1	ENSMUST00000130466.1|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1
mm10_v2_chrX_-_165004829_165004829	0.533054	Hmga1	ENSMUST00000114890.2|Gm17604|ENSMUSG00000079600.2|predicted gene, 17604
mm10_v2_chr2_-_51149100_51149115	0.529219	Hmga1	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr1_+_180111339_180111339	0.521975	Hmga1	ENSMUST00000145181.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr1_+_180109192_180109265	0.509187	Hmga1	ENSMUST00000143176.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000135056.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr4_-_92191749_92191749	0.489898	Hmga1	ENSMUST00000123179.1|Gm12666|ENSMUSG00000066107.6|predicted gene 12666
mm10_v2_chr8_+_45658666_45658728	0.484485	Hmga1	ENSMUST00000134675.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000139869.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000126067.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr1_-_52499980_52499980	0.477566	Hmga1	ENSMUST00000164747.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr18_+_37504264_37504296	0.477253	Hmga1	ENSMUST00000052179.6|Pcdhb20|ENSMUSG00000046191.6|protocadherin beta 20
mm10_v2_chr2_-_69206146_69206194	0.476481	Hmga1	ENSMUST00000127243.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000149643.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000167875.2|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000005365.8|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr9_-_101251810_101251839	0.460871	Hmga1	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr18_+_37513652_37513652	0.457371	Hmga1	ENSMUST00000061405.4|Pcdhb21|ENSMUSG00000044022.4|protocadherin beta 21
mm10_v2_chr12_-_41485751_41485751	0.4571	Hmga1	ENSMUST00000043884.4|Lrrn3|ENSMUSG00000036295.4|leucine rich repeat protein 3, neuronal
mm10_v2_chr3_+_76593550_76593550	0.456863	Hmga1	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr3_+_116008220_116008372	0.450826	Hmga1	ENSMUST00000106502.1|Extl2|ENSMUSG00000027963.8|exostoses (multiple)-like 2
mm10_v2_chr8_+_45658731_45658804	0.430118	Hmga1	ENSMUST00000143820.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000132139.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr2_+_177904285_177904285	0.424099	Hmga1	ENSMUST00000099001.3|Gm14327|ENSMUSG00000074521.3|predicted gene 14327
mm10_v2_chrX_+_112604274_112604274	0.417023	Hmga1	ENSMUST00000071814.6|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr15_+_41447438_41447482	0.410281	Hmga1	ENSMUST00000110297.2|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000090096.4|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr1_+_17145357_17145431	0.408598	Hmga1	ENSMUST00000026879.7|Gdap1|ENSMUSG00000025777.7|ganglioside-induced differentiation-associated-protein 1
mm10_v2_chr11_-_98625661_98625661	0.40563	Hmga1	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr2_-_63184253_63184292	0.404844	Hmga1	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr4_-_82850721_82850814	0.403844	Hmga1	ENSMUST00000139401.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr15_-_103215285_103215366	0.401494	Hmga1	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr16_-_50330987_50331017	0.398149	Hmga1	ENSMUST00000114488.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr1_-_77515048_77515102	0.389867	Hmga1	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chr8_+_45658273_45658298	0.387141	Hmga1	ENSMUST00000153798.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr12_-_108003594_108003613	0.376274	Hmga1	ENSMUST00000066060.4|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr9_+_54538984_54538993	0.374556	Hmga1	ENSMUST00000060242.5|Sh2d7|ENSMUSG00000046460.8|SH2 domain containing 7 	ENSMUST00000118413.1|Sh2d7|ENSMUSG00000046460.8|SH2 domain containing 7
mm10_v2_chr15_+_41830921_41831001	0.370456	Hmga1	ENSMUST00000166917.1|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr10_-_115251407_115251493	0.368742	Hmga1	ENSMUST00000020339.8|Tbc1d15|ENSMUSG00000020130.8|TBC1 domain family, member 15
mm10_v2_chr11_+_108682602_108682639	0.365193	Hmga1	ENSMUST00000106718.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106715.1|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106724.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chr6_-_99632376_99632376	0.364973	Hmga1	ENSMUST00000176255.1|Gm20696|ENSMUSG00000030068.3|predicted gene 20696
mm10_v2_chr14_-_101609033_101609191	0.359147	Hmga1	ENSMUST00000161991.1|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4 	ENSMUST00000100340.3|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4
mm10_v2_chr18_+_37477768_37477835	0.355233	Hmga1	ENSMUST00000051442.5|Pcdhb16|ENSMUSG00000047910.5|protocadherin beta 16
mm10_v2_chr3_+_28263205_28263215	0.354296	Hmga1	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr7_-_28302238_28302238	0.337192	Hmga1	ENSMUST00000108315.3|Dll3|ENSMUSG00000003436.11|delta-like 3 (Drosophila)
mm10_v2_chr19_+_9283231_9283265	0.335966	Hmga1	ENSMUST00000088040.4|Pcna-ps2|ENSMUSG00000067608.4|proliferating cell nuclear antigen pseudogene 2
mm10_v2_chr14_+_26514554_26514554	0.334467	Hmga1	ENSMUST00000104927.1|Gm2178|ENSMUSG00000078128.1|predicted gene 2178
mm10_v2_chr16_-_57754707_57754737	0.330765	Hmga1	ENSMUST00000089332.4|Col8a1|ENSMUSG00000068196.4|collagen, type VIII, alpha 1
mm10_v2_chr7_+_7171330_7171373	0.330668	Hmga1	ENSMUST00000051435.7|Zfp418|ENSMUSG00000034538.7|zinc finger protein 418
mm10_v2_chr18_-_22850738_22850759	0.330504	Hmga1	ENSMUST00000092015.4|Nol4|ENSMUSG00000041923.9|nucleolar protein 4 	ENSMUST00000069215.6|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr2_-_69206133_69206144	0.327792	Hmga1	ENSMUST00000112320.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr1_-_52490736_52490736	0.326148	Hmga1	ENSMUST00000170269.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr6_-_102464667_102464667	0.324364	Hmga1	ENSMUST00000032159.6|Cntn3|ENSMUSG00000030075.8|contactin 3
mm10_v2_chr1_+_107511416_107511431	0.32357	Hmga1	ENSMUST00000009356.4|Serpinb2|ENSMUSG00000062345.4|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm10_v2_chr12_+_51348370_51348406	0.323485	Hmga1	ENSMUST00000121521.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr5_+_13399309_13399382	0.31654	Hmga1	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr9_+_122888471_122888471	0.300975	Hmga1	ENSMUST00000063980.6|Zkscan7|ENSMUSG00000063488.5|zinc finger with KRAB and SCAN domains 7
mm10_v2_chr12_+_51348265_51348368	0.30033	Hmga1	ENSMUST00000119211.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr9_+_95954744_95954783	0.298962	Hmga1	ENSMUST00000034981.7|Xrn1|ENSMUSG00000032410.7|5'-3' exoribonuclease 1
mm10_v2_chr5_+_16553488_16553550	0.297939	Hmga1	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr13_-_21531084_21531120	0.296978	Hmga1	ENSMUST00000045228.5|Zkscan8|ENSMUSG00000063894.8|zinc finger with KRAB and SCAN domains 8
mm10_v2_chr4_+_49059256_49059330	0.293951	Hmga1	ENSMUST00000076670.2|E130309F12Rik|ENSMUSG00000063446.4|RIKEN cDNA E130309F12 gene
mm10_v2_chr12_+_52516077_52516077	0.293567	Hmga1	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr1_-_56978534_56978650	0.293233	Hmga1	ENSMUST00000177282.1|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr2_+_119594288_119594332	0.289235	Hmga1	ENSMUST00000147425.1|1700020I14Rik|ENSMUSG00000085438.1|RIKEN cDNA 1700020I14 gene 	ENSMUST00000153581.1|1700020I14Rik|ENSMUSG00000085438.1|RIKEN cDNA 1700020I14 gene
mm10_v2_chr18_-_15403680_15403687	0.289194	Hmga1	ENSMUST00000079081.6|Aqp4|ENSMUSG00000024411.9|aquaporin 4
mm10_v2_chr16_-_16560201_16560223	0.287577	Hmga1	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr2_-_21205342_21205371	0.28478	Hmga1	ENSMUST00000027992.2|Enkur|ENSMUSG00000026679.3|enkurin, TRPC channel interacting protein
mm10_v2_chr17_-_51826562_51826601	0.284366	Hmga1	ENSMUST00000024720.4|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000129667.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000156051.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000169480.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000148559.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr5_-_28210022_28210034	0.284169	Hmga1	ENSMUST00000118882.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr3_+_36159522_36159522	0.284115	Hmga1	ENSMUST00000165956.2|D3Ertd254e|ENSMUSG00000033883.7|DNA segment, Chr 3, ERATO Doi 254, expressed
mm10_v2_chr10_+_37139558_37139558	0.281419	Hmga1	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr18_-_43059418_43059471	0.275222	Hmga1	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr14_+_105681824_105681831	0.274491	Hmga1	ENSMUST00000073238.6|Gm10076|ENSMUSG00000060143.6|predicted gene 10076
mm10_v2_chr5_+_48242549_48242549	0.272605	Hmga1	ENSMUST00000172493.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila)
mm10_v2_chr10_+_88091070_88091076	0.269356	Hmga1	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr5_+_14514918_14514951	0.269107	Hmga1	ENSMUST00000030691.10|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein) 	ENSMUST00000182407.1|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein)
mm10_v2_chr4_-_97584612_97584643	0.267457	Hmga1	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chrX_+_112615301_112615301	0.263185	Hmga1	ENSMUST00000122805.1|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chrX_-_17571563_17571641	0.261682	Hmga1	ENSMUST00000177213.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr10_+_67185730_67185768	0.261254	Hmga1	ENSMUST00000173689.1|Jmjd1c|ENSMUSG00000037876.10|jumonji domain containing 1C
mm10_v2_chr2_+_20737306_20737321	0.260737	Hmga1	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr10_+_100488289_100488289	0.258935	Hmga1	ENSMUST00000164751.1|Cep290|ENSMUSG00000019971.9|centrosomal protein 290
mm10_v2_chr17_+_88626569_88626609	0.258031	Hmga1	ENSMUST00000150023.1|Ston1|ENSMUSG00000033855.9|stonin 1
mm10_v2_chr1_+_42229726_42229726	0.256058	Hmga1	ENSMUST00000066196.1|Gm9915|ENSMUSG00000053640.1|predicted gene 9915
mm10_v2_chr2_-_86347764_86347764	0.254417	Hmga1	ENSMUST00000099894.2|Olfr1055|ENSMUSG00000075189.2|olfactory receptor 1055
mm10_v2_chrX_+_18162575_18162657	0.252522	Hmga1	ENSMUST00000044484.6|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A 	ENSMUST00000052368.8|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A
mm10_v2_chrX_+_82948861_82948915	0.252459	Hmga1	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chr4_+_21727726_21727790	0.251138	Hmga1	ENSMUST00000102997.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000120679.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000108240.2|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr3_+_95588928_95588953	0.249479	Hmga1	ENSMUST00000177390.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000098861.4|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000060323.5|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr18_+_52767994_52768149	0.248398	Hmga1	ENSMUST00000025413.7|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000163742.2|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000178011.1|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin)
mm10_v2_chrX_-_23285532_23285578	0.246744	Hmga1	ENSMUST00000115319.2|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr12_+_59131473_59131502	0.244952	Hmga1	ENSMUST00000177162.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr10_-_53647080_53647080	0.242649	Hmga1	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chrX_-_17572241_17572325	0.236662	Hmga1	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr13_+_21735055_21735070	0.235859	Hmga1	ENSMUST00000087714.4|Hist1h4j|ENSMUSG00000067455.4|histone cluster 1, H4j
mm10_v2_chr12_+_59131286_59131469	0.232032	Hmga1	ENSMUST00000176464.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000170992.2|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000176322.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr14_-_26971232_26971232	0.231637	Hmga1	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chr1_-_126830632_126830778	0.230353	Hmga1	ENSMUST00000112583.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5 	ENSMUST00000094609.3|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chrM_+_9870_9885	0.22855	Hmga1	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chr3_-_150073620_150073620	0.227505	Hmga1	ENSMUST00000057740.5|Rpsa-ps10|ENSMUSG00000047676.5|ribosomal protein SA, pseudogene 10
mm10_v2_chr4_-_97584605_97584610	0.227007	Hmga1	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr2_-_63184170_63184195	0.226208	Hmga1	ENSMUST00000112452.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr17_+_88626549_88626566	0.221076	Hmga1	ENSMUST00000163588.1|Ston1|ENSMUSG00000033855.9|stonin 1 	ENSMUST00000064035.6|Ston1|ENSMUSG00000033855.9|stonin 1
mm10_v2_chr15_-_100424092_100424173	0.21851	Hmga1	ENSMUST00000154676.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr8_+_40307458_40307458	0.218489	Hmga1	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr5_+_75152274_75152297	0.217249	Hmga1	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chr14_-_26534870_26534931	0.215309	Hmga1	ENSMUST00000139075.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein 	ENSMUST00000102956.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein
mm10_v2_chr11_-_109472611_109472688	0.215056	Hmga1	ENSMUST00000168740.1|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr7_+_113765998_113766039	0.214564	Hmga1	ENSMUST00000046687.9|Spon1|ENSMUSG00000038156.9|spondin 1, (f-spondin) extracellular matrix protein
mm10_v2_chr3_+_95588990_95589009	0.214335	Hmga1	ENSMUST00000177399.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr4_+_147507600_147507600	0.214271	Hmga1	ENSMUST00000063704.7|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr3_-_103791537_103791563	0.212594	Hmga1	ENSMUST00000118317.1|Hipk1|ENSMUSG00000008730.11|homeodomain interacting protein kinase 1
mm10_v2_chr18_+_84088077_84088178	0.210371	Hmga1	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chrX_+_163911401_163911439	0.209756	Hmga1	ENSMUST00000140845.1|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr13_+_5861489_5861501	0.206599	Hmga1	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr18_+_11633276_11633357	0.204963	Hmga1	ENSMUST00000115861.2|Rbbp8|ENSMUSG00000041238.9|retinoblastoma binding protein 8
mm10_v2_chr14_+_69029289_69029414	0.203796	Hmga1	ENSMUST00000014957.8|Stc1|ENSMUSG00000014813.8|stanniocalcin 1
mm10_v2_chr14_+_47663756_47663756	0.203626	Hmga1	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr1_-_150465563_150465604	0.203154	Hmga1	ENSMUST00000164600.1|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000111902.2|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000111901.2|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000006171.9|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
mm10_v2_chr9_-_90255927_90255943	0.200556	Hmga1	ENSMUST00000144646.1|Tbc1d2b|ENSMUSG00000037410.7|TBC1 domain family, member 2B
mm10_v2_chr2_-_52335134_52335200	0.198865	Hmga1	ENSMUST00000075301.3|Neb|ENSMUSG00000026950.10|nebulin
mm10_v2_chr17_+_43953191_43953276	0.19846	Hmga1	ENSMUST00000044792.4|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr4_+_54945038_54945082	0.196798	Hmga1	ENSMUST00000133895.1|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr13_-_74376566_74376566	0.191828	Hmga1	ENSMUST00000091481.2|Zfp72|ENSMUSG00000069184.2|zinc finger protein 72
mm10_v2_chr1_+_15712303_15712303	0.19015	Hmga1	ENSMUST00000170146.1|Kcnb2|ENSMUSG00000090498.1|potassium voltage gated channel, Shab-related subfamily, member 2
mm10_v2_chr4_-_94979063_94979106	0.188436	Hmga1	ENSMUST00000075872.3|Mysm1|ENSMUSG00000062627.3|myb-like, SWIRM and MPN domains 1
mm10_v2_chr9_+_80066895_80066936	0.185138	Hmga1	ENSMUST00000037484.8|Senp6|ENSMUSG00000034252.8|SUMO/sentrin specific peptidase 6 	ENSMUST00000176640.1|Senp6|ENSMUSG00000034252.8|SUMO/sentrin specific peptidase 6
mm10_v2_chr18_+_69593361_69593450	0.181709	Hmga1	ENSMUST00000114978.2|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114977.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chrX_+_75095854_75095922	0.181256	Hmga1	ENSMUST00000033776.8|Dkc1|ENSMUSG00000031403.8|dyskeratosis congenita 1, dyskerin
mm10_v2_chr1_-_30863256_30863256	0.180382	Hmga1	ENSMUST00000088310.3|Phf3|ENSMUSG00000048874.9|PHD finger protein 3
mm10_v2_chr19_+_23723279_23723279	0.180193	Hmga1	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr1_+_4808237_4808287	0.179631	Hmga1	ENSMUST00000131119.1|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1
mm10_v2_chr13_+_23738804_23738809	0.176244	Hmga1	ENSMUST00000040914.1|Hist1h1c|ENSMUSG00000036181.1|histone cluster 1, H1c
mm10_v2_chr13_+_18717289_18717316	0.174944	Hmga1	ENSMUST00000072961.4|Vps41|ENSMUSG00000041236.7|vacuolar protein sorting 41 (yeast)
mm10_v2_chr14_-_34503323_34503345	0.174412	Hmga1	ENSMUST00000171343.1|Bmpr1a|ENSMUSG00000021796.8|bone morphogenetic protein receptor, type 1A
mm10_v2_chr3_-_88772578_88772601	0.170664	Hmga1	ENSMUST00000090945.4|Syt11|ENSMUSG00000068923.8|synaptotagmin XI
mm10_v2_chr1_-_155417283_155417323	0.169287	Hmga1	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr1_+_66364623_66364663	0.167173	Hmga1	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr1_-_157256682_157256701	0.166117	Hmga1	ENSMUST00000134543.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr9_-_42461414_42461461	0.163221	Hmga1	ENSMUST00000066179.7|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like
mm10_v2_chr15_-_36598019_36598124	0.162102	Hmga1	ENSMUST00000155116.1|Pabpc1|ENSMUSG00000022283.8|poly(A) binding protein, cytoplasmic 1
mm10_v2_chrX_+_159303266_159303281	0.155824	Hmga1	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr1_-_155417394_155417435	0.155422	Hmga1	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr13_+_21495218_21495260	0.150715	Hmga1	ENSMUST00000104942.1|AK157302|ENSMUSG00000078139.3|cDNA sequence AK157302
mm10_v2_chr8_+_109778554_109778558	0.148231	Hmga1	ENSMUST00000093157.6|Ap1g1|ENSMUSG00000031731.10|adaptor protein complex AP-1, gamma 1 subunit
mm10_v2_chr5_-_51567717_51567732	0.147193	Hmga1	ENSMUST00000127135.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha 	ENSMUST00000151104.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr1_+_9848270_9848285	0.146265	Hmga1	ENSMUST00000171265.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3
mm10_v2_chr8_-_67974567_67974596	0.14608	Hmga1	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr10_+_127421208_127421235	0.144372	Hmga1	ENSMUST00000168780.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr6_-_59024340_59024450	0.139849	Hmga1	ENSMUST00000173193.1|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr19_-_45591820_45591878	0.138311	Hmga1	ENSMUST00000160003.1|Fbxw4|ENSMUSG00000040913.4|F-box and WD-40 domain protein 4 	ENSMUST00000162879.1|Fbxw4|ENSMUSG00000040913.4|F-box and WD-40 domain protein 4
mm10_v2_chr9_-_101198999_101199080	0.136979	Hmga1	ENSMUST00000066773.7|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chrX_-_9256899_9256917	0.135831	Hmga1	ENSMUST00000115553.2|Gm14862|ENSMUSG00000079694.2|predicted gene 14862
mm10_v2_chr3_-_49757257_49757316	0.135725	Hmga1	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr3_+_96104498_96104571	0.131712	Hmga1	ENSMUST00000132980.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000138206.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000090785.2|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000035519.5|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B
mm10_v2_chr1_+_9848375_9848398	0.129643	Hmga1	ENSMUST00000097826.4|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3
mm10_v2_chr13_-_81570640_81570671	0.124927	Hmga1	ENSMUST00000109565.2|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98
mm10_v2_chr16_+_91225550_91225579	0.124837	Hmga1	ENSMUST00000035608.8|Olig2|ENSMUSG00000039830.8|oligodendrocyte transcription factor 2
mm10_v2_chr15_-_99651580_99651656	0.124832	Hmga1	ENSMUST00000171908.1|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000171702.1|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000109581.2|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000169810.1|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000023756.5|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1
mm10_v2_chr9_+_65890237_65890343	0.124502	Hmga1	ENSMUST00000045802.6|2810417H13Rik|ENSMUSG00000040204.6|RIKEN cDNA 2810417H13 gene
mm10_v2_chr2_-_36136773_36136845	0.123981	Hmga1	ENSMUST00000028251.3|Rbm18|ENSMUSG00000026889.6|RNA binding motif protein 18
mm10_v2_chr3_-_152193803_152193831	0.122837	Hmga1	ENSMUST00000050073.6|Dnajb4|ENSMUSG00000028035.7|DnaJ (Hsp40) homolog, subfamily B, member 4
mm10_v2_chr9_-_100506844_100506856	0.122774	Hmga1	ENSMUST00000112874.3|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr9_+_80066939_80066983	0.118171	Hmga1	ENSMUST00000164859.1|Senp6|ENSMUSG00000034252.8|SUMO/sentrin specific peptidase 6
mm10_v2_chr6_-_39810881_39810988	0.116711	Hmga1	ENSMUST00000114797.1|Mrps33|ENSMUSG00000029918.8|mitochondrial ribosomal protein S33 	ENSMUST00000031978.8|Mrps33|ENSMUSG00000029918.8|mitochondrial ribosomal protein S33
mm10_v2_chr9_+_32116040_32116136	0.116363	Hmga1	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr17_-_56074542_56074571	0.11474	Hmga1	ENSMUST00000139371.1|Ubxn6|ENSMUSG00000019578.5|UBX domain protein 6
mm10_v2_chr19_-_33392255_33392300	0.113655	Hmga1	ENSMUST00000096114.5|Rnls|ENSMUSG00000071573.7|renalase, FAD-dependent amine oxidase 	ENSMUST00000163093.1|Rnls|ENSMUSG00000071573.7|renalase, FAD-dependent amine oxidase
mm10_v2_chr9_-_70421533_70421592	0.11296	Hmga1	ENSMUST00000034742.6|Ccnb2|ENSMUSG00000032218.6|cyclin B2
mm10_v2_chr6_+_91684061_91684132	0.11053	Hmga1	ENSMUST00000032185.7|Slc6a6|ENSMUSG00000030096.7|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm10_v2_chr17_-_32822200_32822200	0.109582	Hmga1	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr10_-_7956223_7956271	0.107972	Hmga1	ENSMUST00000146444.1|Tab2|ENSMUSG00000015755.10|TGF-beta activated kinase 1/MAP3K7 binding protein 2
mm10_v2_chr11_-_42000532_42000592	0.106785	Hmga1	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr11_-_42000284_42000356	0.103866	Hmga1	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr5_-_123666682_123666695	0.103646	Hmga1	ENSMUST00000149410.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chrX_-_70365052_70365112	0.10142	Hmga1	ENSMUST00000101509.2|Ids|ENSMUSG00000035847.9|iduronate 2-sulfatase
mm10_v2_chr19_-_12796108_12796146	0.100717	Hmga1	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr14_-_118923070_118923167	0.0982452	Hmga1	ENSMUST00000047208.5|Dzip1|ENSMUSG00000042156.9|DAZ interacting protein 1
mm10_v2_chr9_-_71896047_71896102	0.0975816	Hmga1	ENSMUST00000184448.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr6_+_17636983_17637014	0.0959171	Hmga1	ENSMUST00000015877.7|Capza2|ENSMUSG00000015733.7|capping protein (actin filament) muscle Z-line, alpha 2
mm10_v2_chr7_-_143460989_143461050	0.0934077	Hmga1	ENSMUST00000167912.1|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57) 	ENSMUST00000037287.6|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57)
mm10_v2_chr3_-_108536466_108536536	0.0898171	Hmga1	ENSMUST00000048012.6|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106626.2|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106625.3|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene
mm10_v2_chr13_-_106847267_106847267	0.0896428	Hmga1	ENSMUST00000057427.4|Lrrc70|ENSMUSG00000078933.1|leucine rich repeat containing 70
mm10_v2_chr12_+_72441852_72441866	0.088529	Hmga1	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr18_+_37484955_37485028	0.088038	Hmga1	ENSMUST00000053856.4|Pcdhb17|ENSMUSG00000046387.4|protocadherin beta 17
mm10_v2_chr18_-_34579072_34579130	0.0874094	Hmga1	ENSMUST00000079287.5|Nme5|ENSMUSG00000035984.8|NME/NM23 family member 5
mm10_v2_chr6_-_59024470_59024549	0.0830381	Hmga1	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr11_+_110968016_110968042	0.0817748	Hmga1	ENSMUST00000106636.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENSMUST00000180023.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr17_+_32685610_32685627	0.0815426	Hmga1	ENSMUST00000168171.1|Cyp4f15|ENSMUSG00000073424.3|cytochrome P450, family 4, subfamily f, polypeptide 15
mm10_v2_chr17_+_43952999_43953063	0.0812972	Hmga1	ENSMUST00000177857.1|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr1_-_158814469_158814469	0.0811984	Hmga1	ENSMUST00000161589.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr15_+_34238026_34238177	0.081076	Hmga1	ENSMUST00000022867.3|Laptm4b|ENSMUSG00000022257.3|lysosomal-associated protein transmembrane 4B
mm10_v2_chr12_-_65073927_65073954	0.0809214	Hmga1	ENSMUST00000021332.8|Fkbp3|ENSMUSG00000020949.8|FK506 binding protein 3
mm10_v2_chr1_+_179961110_179961110	0.0761309	Hmga1	ENSMUST00000076687.5|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000097450.3|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr12_+_72441933_72441970	0.075937	Hmga1	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr11_-_107189325_107189381	0.075873	Hmga1	ENSMUST00000018577.7|Nol11|ENSMUSG00000018433.8|nucleolar protein 11 	ENSMUST00000106757.1|Nol11|ENSMUSG00000018433.8|nucleolar protein 11
mm10_v2_chr13_+_104287855_104287882	0.0754302	Hmga1	ENSMUST00000065766.6|Adamts6|ENSMUSG00000046169.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm10_v2_chrX_-_59568068_59568094	0.0720874	Hmga1	ENSMUST00000119833.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13 	ENSMUST00000131319.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chr3_-_104864420_104864505	0.0697875	Hmga1	ENSMUST00000094028.5|Capza1|ENSMUSG00000070372.7|capping protein (actin filament) muscle Z-line, alpha 1
mm10_v2_chr5_-_62765618_62765656	0.0697784	Hmga1	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr6_+_142414012_142414012	0.0682531	Hmga1	ENSMUST00000141548.1|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr16_+_58670208_58670246	0.0678057	Hmga1	ENSMUST00000060077.5|Cpox|ENSMUSG00000022742.5|coproporphyrinogen oxidase
mm10_v2_chr19_-_19001099_19001119	0.0673164	Hmga1	ENSMUST00000040153.8|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta 	ENSMUST00000112828.1|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta
mm10_v2_chr19_+_28963892_28963969	0.0664641	Hmga1	ENSMUST00000045674.2|Ppapdc2|ENSMUSG00000040105.2|phosphatidic acid phosphatase type 2 domain containing 2
mm10_v2_chr12_+_98771018_98771041	0.0662525	Hmga1	ENSMUST00000021399.7|Zc3h14|ENSMUSG00000021012.9|zinc finger CCCH type containing 14
mm10_v2_chr12_+_55089202_55089202	0.0650416	Hmga1	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr18_+_37736897_37736958	0.0640723	Hmga1	ENSMUST00000091935.4|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr5_-_124578992_124579044	0.0625268	Hmga1	ENSMUST00000128920.1|Eif2b1|ENSMUSG00000029388.8|eukaryotic translation initiation factor 2B, subunit 1 (alpha)
mm10_v2_chr11_+_52232009_52232041	0.0604707	Hmga1	ENSMUST00000037324.5|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A 	ENSMUST00000166537.1|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A
mm10_v2_chr4_-_123750236_123750345	0.0601219	Hmga1	ENSMUST00000102636.3|Akirin1|ENSMUSG00000023075.9|akirin 1
mm10_v2_chrM_+_10167_10167	0.0592478	Hmga1	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr12_-_83487708_83487729	0.0591076	Hmga1	ENSMUST00000177959.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3 	ENSMUST00000178756.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr7_+_130865835_130865942	0.0577689	Hmga1	ENSMUST00000075181.4|Plekha1|ENSMUSG00000040268.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 	ENSMUST00000048180.5|Plekha1|ENSMUSG00000040268.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm10_v2_chr12_+_49382791_49382883	0.0569504	Hmga1	ENSMUST00000179669.1|Foxg1|ENSMUSG00000020950.9|forkhead box G1
mm10_v2_chr3_+_97901190_97901250	0.0548069	Hmga1	ENSMUST00000029476.2|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) 	ENSMUST00000122288.1|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
mm10_v2_chr9_+_75071579_75071600	0.0546567	Hmga1	ENSMUST00000136731.1|Myo5a|ENSMUSG00000034593.10|myosin VA
mm10_v2_chr1_+_179960472_179960585	0.0535867	Hmga1	ENSMUST00000097453.2|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000111117.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr14_-_52237791_52237791	0.0530076	Hmga1	ENSMUST00000149975.1|Chd8|ENSMUSG00000053754.7|chromodomain helicase DNA binding protein 8
mm10_v2_chr16_-_59632520_59632541	0.0524213	Hmga1	ENSMUST00000118438.1|Arl6|ENSMUSG00000022722.12|ADP-ribosylation factor-like 6
mm10_v2_chr2_+_14388434_14388512	0.0521915	Hmga1	ENSMUST00000133258.1|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12
mm10_v2_chr11_+_101582236_101582312	0.0513618	Hmga1	ENSMUST00000039581.7|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000100403.2|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000107194.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000128614.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A
mm10_v2_chr18_+_37400845_37400886	0.0501172	Hmga1	ENSMUST00000057228.1|Pcdhb9|ENSMUSG00000051242.1|protocadherin beta 9
mm10_v2_chr10_+_63243785_63243846	0.0499033	Hmga1	ENSMUST00000020258.8|Herc4|ENSMUSG00000020064.8|hect domain and RLD 4
mm10_v2_chr5_-_5266038_5266292	0.04976	Hmga1	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr12_-_91849081_91849157	0.0491943	Hmga1	ENSMUST00000167466.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000021347.5|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000178462.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans)
mm10_v2_chr10_+_53596936_53597004	0.0483955	Hmga1	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chr8_+_36993551_36993611	0.0482646	Hmga1	ENSMUST00000098825.3|AI429214|ENSMUSG00000074384.3|expressed sequence AI429214
mm10_v2_chr13_-_23622502_23622563	0.0476781	Hmga1	ENSMUST00000062045.2|Hist1h1e|ENSMUSG00000051627.2|histone cluster 1, H1e
mm10_v2_chr11_-_46052311_46052311	0.0457121	Hmga1	ENSMUST00000093169.2|Gm12166|ENSMUSG00000069899.3|predicted gene 12166
mm10_v2_chr15_+_61987034_61987059	0.0452715	Hmga1	ENSMUST00000159338.1|Myc|ENSMUSG00000022346.8|myelocytomatosis oncogene
mm10_v2_chr15_+_92597104_92597121	0.0450658	Hmga1	ENSMUST00000035399.8|Pdzrn4|ENSMUSG00000036218.9|PDZ domain containing RING finger 4
mm10_v2_chr4_+_11704439_11704457	0.0449472	Hmga1	ENSMUST00000108304.2|Gem|ENSMUSG00000028214.7|GTP binding protein (gene overexpressed in skeletal muscle)
mm10_v2_chr18_-_35498856_35498925	0.0437828	Hmga1	ENSMUST00000025215.8|Sil1|ENSMUSG00000024357.9|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm10_v2_chr5_-_103100054_103100088	0.0430325	Hmga1	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr19_+_26623419_26623471	0.0426808	Hmga1	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr4_+_24973419_24973419	0.0425832	Hmga1	ENSMUST00000038920.1|Gpr63|ENSMUSG00000040372.2|G protein-coupled receptor 63
mm10_v2_chr10_+_96616998_96617015	0.0420302	Hmga1	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr18_+_32067729_32067811	0.0414998	Hmga1	ENSMUST00000025243.3|Iws1|ENSMUSG00000024384.3|IWS1 homolog (S. cerevisiae)
mm10_v2_chr4_+_101507947_101508032	0.0411619	Hmga1	ENSMUST00000149047.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENSMUST00000106929.3|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr8_-_60954726_60954790	0.0358479	Hmga1	ENSMUST00000110302.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr3_-_63851251_63851359	0.0350895	Hmga1	ENSMUST00000162269.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000159676.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000175947.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chrX_+_136822671_136822780	0.0345823	Hmga1	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr1_-_93305850_93305915	0.0338121	Hmga1	ENSMUST00000112944.1|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2 	ENSMUST00000112942.1|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2 	ENSMUST00000027492.7|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2
mm10_v2_chrX_-_136741155_136741352	0.0325708	Hmga1	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr8_+_65967157_65967191	0.0321242	Hmga1	ENSMUST00000072482.6|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr3_-_129755305_129755326	0.0315709	Hmga1	ENSMUST00000029653.2|Egf|ENSMUSG00000028017.3|epidermal growth factor
mm10_v2_chr4_+_105157339_105157354	0.0273364	Hmga1	ENSMUST00000064139.7|Ppap2b|ENSMUSG00000028517.8|phosphatidic acid phosphatase type 2B
mm10_v2_chr8_-_36613937_36613948	0.026824	Hmga1	ENSMUST00000033923.7|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr16_+_10835046_10835084	0.025397	Hmga1	ENSMUST00000037913.8|Rmi2|ENSMUSG00000037991.9|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)
mm10_v2_chr13_-_18031616_18031629	0.0240724	Hmga1	ENSMUST00000099736.2|Vdac3-ps1|ENSMUSG00000075053.2|voltage-dependent anion channel 3, pseudogene 1
mm10_v2_chrX_-_59567348_59567472	0.0221855	Hmga1	ENSMUST00000124402.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chr2_+_71981184_71981287	0.018642	Hmga1	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr2_+_125866107_125866282	0.0183894	Hmga1	ENSMUST00000134337.1|Galk2|ENSMUSG00000027207.9|galactokinase 2 	ENSMUST00000094604.2|Galk2|ENSMUSG00000027207.9|galactokinase 2 	ENSMUST00000134798.1|Galk2|ENSMUSG00000027207.9|galactokinase 2
mm10_v2_chr1_-_156036473_156036480	0.0183312	Hmga1	ENSMUST00000097527.3|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1 	ENSMUST00000027738.7|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr6_-_30693676_30693749	0.0169528	Hmga1	ENSMUST00000169422.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115131.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115130.2|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000031810.8|Cep41|ENSMUSG00000029790.10|centrosomal protein 41
mm10_v2_chr3_+_124321031_124321113	0.0160487	Hmga1	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr1_-_140183404_140183415	0.014863	Hmga1	ENSMUST00000066859.6|Cfh|ENSMUSG00000026365.9|complement component factor h 	ENSMUST00000111976.2|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr10_-_25200110_25200178	0.0148475	Hmga1	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr18_-_12121460_12121492	0.0148214	Hmga1	ENSMUST00000055447.6|Tmem241|ENSMUSG00000049411.7|transmembrane protein 241 	ENSMUST00000050228.7|Tmem241|ENSMUSG00000049411.7|transmembrane protein 241 	ENSMUST00000092075.4|Tmem241|ENSMUSG00000049411.7|transmembrane protein 241
mm10_v2_chr5_+_8046077_8046078	0.0133336	Hmga1	ENSMUST00000088786.4|Sri|ENSMUSG00000003161.9|sorcin
mm10_v2_chr6_-_112946754_112946915	0.011047	Hmga1	ENSMUST00000113169.2|Srgap3|ENSMUSG00000030257.10|SLIT-ROBO Rho GTPase activating protein 3
mm10_v2_chr7_-_62420139_62420157	0.0100507	Hmga1	ENSMUST00000094340.3|Mkrn3|ENSMUSG00000070527.3|makorin, ring finger protein, 3
mm10_v2_chr14_-_46788267_46788411	0.00779099	Hmga1	ENSMUST00000015903.4|Cnih1|ENSMUSG00000015759.4|cornichon homolog 1 (Drosophila)
mm10_v2_chr6_-_112947246_112947277	0.00753221	Hmga1	ENSMUST00000088373.4|Srgap3|ENSMUSG00000030257.10|SLIT-ROBO Rho GTPase activating protein 3
mm10_v2_chr11_-_79962374_79962398	0.00540404	Hmga1	ENSMUST00000108241.1|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000043152.5|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr10_+_34297421_34297513	0.00530314	Hmga1	ENSMUST00000047935.6|Tspyl4|ENSMUSG00000039485.6|TSPY-like 4
mm10_v2_chr18_+_56562443_56562593	0.00299708	Hmga1	ENSMUST00000130163.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export 	ENSMUST00000132628.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export
mm10_v2_chr7_-_83550258_83550258	0.00299691	Hmga1	ENSMUST00000177929.1|Gm10610|ENSMUSG00000094841.1|predicted gene 10610
mm10_v2_chr18_-_64516547_64516565	0.0012986	Hmga1	ENSMUST00000025483.9|Nars|ENSMUSG00000024587.9|asparaginyl-tRNA synthetase
mm10_v2_chr15_-_50890396_50890463	0.00103601	Hmga1	ENSMUST00000185183.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr11_+_101627942_101627972	0.000701466	Hmga1	ENSMUST00000010506.3|Rdm1|ENSMUSG00000010362.3|RAD52 motif 1
