mm10_v2_chr14_+_101840602_101840677	2.45566	Hnf4a	ENSMUST00000159314.1|Lmo7|ENSMUSG00000033060.9|LIM domain only 7
mm10_v2_chr2_-_131043088_131043088	2.29881	Hnf4a	ENSMUST00000110240.3|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4 	ENSMUST00000066958.4|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4 	ENSMUST00000110235.1|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4
mm10_v2_chr2_-_131042682_131042682	2.2421	Hnf4a	ENSMUST00000028787.5|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4 	ENSMUST00000110239.1|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4 	ENSMUST00000110234.1|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4
mm10_v2_chr14_+_101840501_101840554	2.2168	Hnf4a	ENSMUST00000159026.1|Lmo7|ENSMUSG00000033060.9|LIM domain only 7
mm10_v2_chr9_-_77347816_77347887	2.0118	Hnf4a	ENSMUST00000184138.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184006.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000185144.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000034910.9|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr7_+_45896941_45897101	1.90031	Hnf4a	ENSMUST00000069772.7|Tmem143|ENSMUSG00000002781.11|transmembrane protein 143 	ENSMUST00000107716.1|Tmem143|ENSMUSG00000002781.11|transmembrane protein 143
mm10_v2_chr11_+_104282371_104282392	1.8897	Hnf4a	ENSMUST00000106988.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau 	ENSMUST00000106989.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr9_-_77347787_77347815	1.63072	Hnf4a	ENSMUST00000184848.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184415.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr11_-_81968415_81968457	1.58126	Hnf4a	ENSMUST00000066197.6|Asic2|ENSMUSG00000020704.7|acid-sensing (proton-gated) ion channel 2
mm10_v2_chr7_+_45897429_45897534	1.46966	Hnf4a	ENSMUST00000140243.1|Tmem143|ENSMUSG00000002781.11|transmembrane protein 143
mm10_v2_chrX_-_162565514_162565617	1.40641	Hnf4a	ENSMUST00000154424.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr7_+_112225856_112225900	1.34697	Hnf4a	ENSMUST00000050149.5|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENSMUST00000106647.1|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENSMUST00000106648.1|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2
mm10_v2_chr15_+_3270767_3271006	1.32087	Hnf4a	ENSMUST00000082424.4|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159158.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159216.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000160311.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1
mm10_v2_chr8_-_113848615_113848774	1.29072	Hnf4a	ENSMUST00000093113.4|Adamts18|ENSMUSG00000053399.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm10_v2_chr15_+_82252397_82252475	1.22443	Hnf4a	ENSMUST00000136948.1|1500009C09Rik|ENSMUSG00000068099.4|RIKEN cDNA 1500009C09 gene
mm10_v2_chr6_+_86195214_86195251	1.18747	Hnf4a	ENSMUST00000032066.9|Tgfa|ENSMUSG00000029999.9|transforming growth factor alpha
mm10_v2_chr15_-_102722150_102722178	1.186	Hnf4a	ENSMUST00000023818.3|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr15_-_102722120_102722137	1.1761	Hnf4a	ENSMUST00000171838.1|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr4_+_136286061_136286114	1.16331	Hnf4a	ENSMUST00000069195.4|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46 	ENSMUST00000130658.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr4_+_126609818_126609896	1.09565	Hnf4a	ENSMUST00000097886.3|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene 	ENSMUST00000164362.1|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene
mm10_v2_chr16_-_22439719_22439733	1.06262	Hnf4a	ENSMUST00000079601.6|Etv5|ENSMUSG00000013089.9|ets variant gene 5
mm10_v2_chr19_+_44992127_44992136	1.03107	Hnf4a	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr7_+_67222544_67222635	1.00968	Hnf4a	ENSMUST00000058771.5|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4 	ENSMUST00000179106.1|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4
mm10_v2_chr11_+_78499087_78499123	0.997533	Hnf4a	ENSMUST00000017488.4|Vtn|ENSMUSG00000017344.4|vitronectin
mm10_v2_chr9_+_58582240_58582292	0.991731	Hnf4a	ENSMUST00000177292.1|Nptn|ENSMUSG00000032336.11|neuroplastin 	ENSMUST00000085651.5|Nptn|ENSMUSG00000032336.11|neuroplastin
mm10_v2_chr4_+_152199805_152199821	0.949889	Hnf4a	ENSMUST00000105652.2|Acot7|ENSMUSG00000028937.8|acyl-CoA thioesterase 7
mm10_v2_chr12_+_58211772_58211804	0.910836	Hnf4a	ENSMUST00000110671.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1 	ENSMUST00000044299.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1
mm10_v2_chr6_+_54429603_54429649	0.846274	Hnf4a	ENSMUST00000132855.1|Wipf3|ENSMUSG00000086040.2|WAS/WASL interacting protein family, member 3 	ENSMUST00000126637.1|Wipf3|ENSMUSG00000086040.2|WAS/WASL interacting protein family, member 3
mm10_v2_chr7_+_25268387_25268420	0.830111	Hnf4a	ENSMUST00000169392.1|Cic|ENSMUSG00000005442.7|capicua homolog (Drosophila)
mm10_v2_chr5_+_19907502_19907551	0.781447	Hnf4a	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr4_-_119538769_119538769	0.764008	Hnf4a	ENSMUST00000079611.6|AA415398|ENSMUSG00000087385.2|expressed sequence AA415398
mm10_v2_chr6_-_86765807_86765834	0.75781	Hnf4a	ENSMUST00000123732.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr6_-_86765866_86765921	0.757372	Hnf4a	ENSMUST00000113675.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr7_-_4725082_4725295	0.755641	Hnf4a	ENSMUST00000086363.4|Tmem150b|ENSMUSG00000046456.8|transmembrane protein 150B 	ENSMUST00000086364.4|Tmem150b|ENSMUSG00000046456.8|transmembrane protein 150B
mm10_v2_chr2_+_71117923_71118061	0.753912	Hnf4a	ENSMUST00000028403.2|Cybrd1|ENSMUSG00000027015.4|cytochrome b reductase 1
mm10_v2_chr17_+_55445375_55445389	0.732698	Hnf4a	ENSMUST00000133899.1|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2 	ENSMUST00000086878.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr17_-_91088726_91088858	0.713833	Hnf4a	ENSMUST00000072671.7|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000174331.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000161402.3|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000054059.8|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr2_+_92375306_92375306	0.701619	Hnf4a	ENSMUST00000028650.8|Pex16|ENSMUSG00000027222.8|peroxisomal biogenesis factor 16
mm10_v2_chr6_+_125145235_125145251	0.698828	Hnf4a	ENSMUST00000119527.1|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000088276.6|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000051171.7|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000117675.1|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1
mm10_v2_chr17_-_35910032_35910076	0.664191	Hnf4a	ENSMUST00000141662.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000056034.6|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000077494.6|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000149277.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000061052.5|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1
mm10_v2_chrX_-_73660047_73660117	0.63019	Hnf4a	ENSMUST00000114472.1|Pnck|ENSMUSG00000002012.7|pregnancy upregulated non-ubiquitously expressed CaM kinase
mm10_v2_chr5_+_19907774_19907861	0.627094	Hnf4a	ENSMUST00000115267.2|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr6_-_41636389_41636409	0.625145	Hnf4a	ENSMUST00000031902.5|Trpv6|ENSMUSG00000029868.8|transient receptor potential cation channel, subfamily V, member 6
mm10_v2_chr8_-_83594440_83594491	0.615688	Hnf4a	ENSMUST00000019382.9|Tecr|ENSMUSG00000031708.9|trans-2,3-enoyl-CoA reductase 	ENSMUST00000165740.1|Tecr|ENSMUSG00000031708.9|trans-2,3-enoyl-CoA reductase
mm10_v2_chr19_+_46356880_46356942	0.603554	Hnf4a	ENSMUST00000086969.6|Tmem180|ENSMUSG00000025227.8|transmembrane protein 180 	ENSMUST00000128455.1|Tmem180|ENSMUSG00000025227.8|transmembrane protein 180
mm10_v2_chr5_+_117120120_117120180	0.59774	Hnf4a	ENSMUST00000111978.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3
mm10_v2_chr2_-_27248335_27248346	0.59522	Hnf4a	ENSMUST00000139312.1|Sardh|ENSMUSG00000009614.10|sarcosine dehydrogenase
mm10_v2_chr17_-_35909626_35909700	0.588899	Hnf4a	ENSMUST00000141132.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1
mm10_v2_chr10_-_13552838_13552870	0.584369	Hnf4a	ENSMUST00000105541.1|Pex3|ENSMUSG00000019809.10|peroxisomal biogenesis factor 3
mm10_v2_chr12_-_67222549_67222578	0.574274	Hnf4a	ENSMUST00000037181.8|Mdga2|ENSMUSG00000034912.10|MAM domain containing glycosylphosphatidylinositol anchor 2
mm10_v2_chr8_-_83594405_83594432	0.57355	Hnf4a	ENSMUST00000163837.1|Tecr|ENSMUSG00000031708.9|trans-2,3-enoyl-CoA reductase
mm10_v2_chr3_-_84304762_84304809	0.569809	Hnf4a	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr17_+_34604262_34604304	0.562092	Hnf4a	ENSMUST00000174041.1|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr4_-_138326234_138326307	0.550203	Hnf4a	ENSMUST00000105817.3|Pink1|ENSMUSG00000028756.6|PTEN induced putative kinase 1 	ENSMUST00000030536.6|Pink1|ENSMUSG00000028756.6|PTEN induced putative kinase 1
mm10_v2_chrX_-_73659724_73659877	0.545339	Hnf4a	ENSMUST00000114473.1|Pnck|ENSMUSG00000002012.7|pregnancy upregulated non-ubiquitously expressed CaM kinase 	ENSMUST00000002087.7|Pnck|ENSMUSG00000002012.7|pregnancy upregulated non-ubiquitously expressed CaM kinase
mm10_v2_chr19_+_4594312_4594332	0.527996	Hnf4a	ENSMUST00000113825.2|Pcx|ENSMUSG00000024892.9|pyruvate carboxylase
mm10_v2_chr2_-_59160644_59160683	0.52235	Hnf4a	ENSMUST00000077687.5|Ccdc148|ENSMUSG00000036641.8|coiled-coil domain containing 148
mm10_v2_chr7_-_67222412_67222458	0.521726	Hnf4a	ENSMUST00000181631.1|1700112J16Rik|ENSMUSG00000097527.1|RIKEN cDNA 1700112J16 gene
mm10_v2_chr8_+_84990585_84990649	0.514471	Hnf4a	ENSMUST00000064495.6|Hook2|ENSMUSG00000052566.7|hook homolog 2 (Drosophila)
mm10_v2_chr3_-_84305385_84305456	0.506098	Hnf4a	ENSMUST00000122849.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2 	ENSMUST00000132283.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr15_+_76797628_76797628	0.480419	Hnf4a	ENSMUST00000165535.2|Gm17271|ENSMUSG00000090429.2|predicted gene, 17271
mm10_v2_chr9_-_44288535_44288615	0.480246	Hnf4a	ENSMUST00000161354.1|Abcg4|ENSMUSG00000032131.9|ATP-binding cassette, sub-family G (WHITE), member 4
mm10_v2_chr2_+_3704787_3704807	0.479376	Hnf4a	ENSMUST00000115054.2|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr1_-_77515048_77515102	0.476237	Hnf4a	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chrX_-_95166307_95166539	0.475453	Hnf4a	ENSMUST00000113873.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113876.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113885.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113883.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182001.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113882.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113878.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182562.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9
mm10_v2_chr3_-_130730375_130730398	0.473317	Hnf4a	ENSMUST00000079085.6|Rpl34|ENSMUSG00000062006.6|ribosomal protein L34
mm10_v2_chr5_-_24447587_24447854	0.468677	Hnf4a	ENSMUST00000127194.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000115033.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000123167.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000030799.8|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1
mm10_v2_chr9_-_44288332_44288409	0.451965	Hnf4a	ENSMUST00000161408.1|Abcg4|ENSMUSG00000032131.9|ATP-binding cassette, sub-family G (WHITE), member 4
mm10_v2_chr17_-_45592569_45592581	0.449479	Hnf4a	ENSMUST00000163492.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr2_-_130638094_130638113	0.437841	Hnf4a	ENSMUST00000089561.3|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3 	ENSMUST00000110260.1|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3
mm10_v2_chr11_+_4986824_4986894	0.431698	Hnf4a	ENSMUST00000009234.9|Ap1b1|ENSMUSG00000009090.11|adaptor protein complex AP-1, beta 1 subunit 	ENSMUST00000109897.1|Ap1b1|ENSMUSG00000009090.11|adaptor protein complex AP-1, beta 1 subunit
mm10_v2_chr15_-_27630644_27630714	0.426973	Hnf4a	ENSMUST00000059662.7|Fam105b|ENSMUSG00000046034.7|family with sequence similarity 105, member B
mm10_v2_chr17_-_45592262_45592411	0.4244	Hnf4a	ENSMUST00000164769.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr19_-_45998479_45998521	0.418986	Hnf4a	ENSMUST00000045396.7|9130011E15Rik|ENSMUSG00000039901.9|RIKEN cDNA 9130011E15 gene
mm10_v2_chr2_+_25500750_25500769	0.413706	Hnf4a	ENSMUST00000015239.3|Fbxw5|ENSMUSG00000015095.6|F-box and WD-40 domain protein 5
mm10_v2_chr11_+_105967938_105967956	0.410815	Hnf4a	ENSMUST00000001963.7|Ace|ENSMUSG00000020681.8|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm10_v2_chr8_-_13200576_13200636	0.401632	Hnf4a	ENSMUST00000165605.2|Grtp1|ENSMUSG00000038515.9|GH regulated TBC protein 1
mm10_v2_chr6_+_124663027_124663174	0.385982	Hnf4a	ENSMUST00000004381.7|Lpcat3|ENSMUSG00000004270.7|lysophosphatidylcholine acyltransferase 3
mm10_v2_chr10_+_18845071_18845112	0.384328	Hnf4a	ENSMUST00000019998.7|Perp|ENSMUSG00000019851.7|PERP, TP53 apoptosis effector
mm10_v2_chr1_-_155417283_155417323	0.372816	Hnf4a	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr16_-_4624984_4624991	0.366056	Hnf4a	ENSMUST00000014445.6|Pam16|ENSMUSG00000014301.6|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
mm10_v2_chr3_-_130730310_130730352	0.362422	Hnf4a	ENSMUST00000062601.7|Rpl34|ENSMUSG00000062006.6|ribosomal protein L34
mm10_v2_chr2_+_130406478_130406532	0.362292	Hnf4a	ENSMUST00000055421.4|Tmem239|ENSMUSG00000049692.6|transmembrane 239
mm10_v2_chr9_+_22003035_22003046	0.36129	Hnf4a	ENSMUST00000115331.2|Prkcsh|ENSMUSG00000003402.7|protein kinase C substrate 80K-H 	ENSMUST00000003493.7|Prkcsh|ENSMUSG00000003402.7|protein kinase C substrate 80K-H
mm10_v2_chr3_+_95134088_95134088	0.354344	Hnf4a	ENSMUST00000066386.5|Lysmd1|ENSMUSG00000053769.5|LysM, putative peptidoglycan-binding, domain containing 1
mm10_v2_chr2_+_91096744_91096788	0.351577	Hnf4a	ENSMUST00000132741.2|Spi1|ENSMUSG00000002111.8|spleen focus forming virus (SFFV) proviral integration oncogene
mm10_v2_chr17_-_45592485_45592497	0.35149	Hnf4a	ENSMUST00000166119.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr19_+_5088534_5088575	0.343389	Hnf4a	ENSMUST00000025811.4|Yif1a|ENSMUSG00000024875.4|Yip1 interacting factor homolog A (S. cerevisiae)
mm10_v2_chr1_-_155417394_155417435	0.339328	Hnf4a	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr11_+_101582236_101582312	0.338642	Hnf4a	ENSMUST00000039581.7|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000100403.2|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000107194.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000128614.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A
mm10_v2_chr6_-_122602345_122602400	0.336068	Hnf4a	ENSMUST00000147760.1|Apobec1|ENSMUSG00000040613.8|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 	ENSMUST00000112585.1|Apobec1|ENSMUSG00000040613.8|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
mm10_v2_chr3_+_7612702_7612705	0.330175	Hnf4a	ENSMUST00000181286.1|Gm16685|ENSMUSG00000097804.1|predicted gene, 16685
mm10_v2_chr1_-_55226768_55226813	0.329441	Hnf4a	ENSMUST00000027121.8|Rftn2|ENSMUSG00000025978.8|raftlin family member 2 	ENSMUST00000114428.2|Rftn2|ENSMUSG00000025978.8|raftlin family member 2
mm10_v2_chr6_+_21985903_21985972	0.322535	Hnf4a	ENSMUST00000137437.1|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1 	ENSMUST00000115383.2|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1
mm10_v2_chr4_-_118409219_118409282	0.316595	Hnf4a	ENSMUST00000075406.5|Szt2|ENSMUSG00000033253.12|seizure threshold 2
mm10_v2_chr7_+_27452417_27452469	0.312638	Hnf4a	ENSMUST00000108357.1|Blvrb|ENSMUSG00000040466.9|biliverdin reductase B (flavin reductase (NADPH))
mm10_v2_chr12_-_93929102_93929102	0.309517	Hnf4a	ENSMUST00000180321.1|Gm9726|ENSMUSG00000094935.1|predicted gene 9726
mm10_v2_chrX_-_150814265_150814345	0.304685	Hnf4a	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chrX_+_48623737_48623790	0.29499	Hnf4a	ENSMUST00000114936.1|Slc25a14|ENSMUSG00000031105.10|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm10_v2_chr16_-_17928136_17928219	0.294776	Hnf4a	ENSMUST00000003622.8|Slc25a1|ENSMUSG00000003528.8|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm10_v2_chr5_+_30232581_30232680	0.293198	Hnf4a	ENSMUST00000145167.1|Ept1|ENSMUSG00000075703.9|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm10_v2_chr5_-_103977360_103977403	0.29125	Hnf4a	ENSMUST00000048118.8|Hsd17b13|ENSMUSG00000034528.9|hydroxysteroid (17-beta) dehydrogenase 13
mm10_v2_chr8_+_12915879_12915975	0.286112	Hnf4a	ENSMUST00000110876.2|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like 	ENSMUST00000110879.2|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like
mm10_v2_chr7_-_110614761_110614928	0.268098	Hnf4a	ENSMUST00000166020.1|Sbf2|ENSMUSG00000038371.8|SET binding factor 2 	ENSMUST00000171218.1|Sbf2|ENSMUSG00000038371.8|SET binding factor 2 	ENSMUST00000033058.7|Sbf2|ENSMUSG00000038371.8|SET binding factor 2 	ENSMUST00000164759.1|Sbf2|ENSMUSG00000038371.8|SET binding factor 2
mm10_v2_chr7_+_30232032_30232050	0.265473	Hnf4a	ENSMUST00000149654.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr6_-_122602404_122602444	0.258653	Hnf4a	ENSMUST00000112586.1|Apobec1|ENSMUSG00000040613.8|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
mm10_v2_chr3_-_108085346_108085412	0.257427	Hnf4a	ENSMUST00000078912.5|Ampd2|ENSMUSG00000027889.11|adenosine monophosphate deaminase 2
mm10_v2_chr18_+_36348653_36348728	0.253572	Hnf4a	ENSMUST00000050584.3|Cystm1|ENSMUSG00000046727.6|cysteine-rich transmembrane module containing 1
mm10_v2_chr7_+_66689889_66689980	0.251474	Hnf4a	ENSMUST00000153007.1|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila) 	ENSMUST00000177726.1|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila) 	ENSMUST00000121777.2|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila) 	ENSMUST00000150071.1|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila) 	ENSMUST00000077967.6|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila)
mm10_v2_chr10_-_128744014_128744085	0.245863	Hnf4a	ENSMUST00000026414.7|Dgka|ENSMUSG00000025357.7|diacylglycerol kinase, alpha
mm10_v2_chr11_+_3895223_3895310	0.238944	Hnf4a	ENSMUST00000055931.4|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18 	ENSMUST00000109996.1|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18
mm10_v2_chr16_-_34095983_34096060	0.238558	Hnf4a	ENSMUST00000114973.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114964.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr1_-_52499980_52499980	0.230765	Hnf4a	ENSMUST00000164747.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr16_-_34513944_34514056	0.228741	Hnf4a	ENSMUST00000151491.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114960.2|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr13_+_67833235_67833235	0.226594	Hnf4a	ENSMUST00000060609.7|Gm10037|ENSMUSG00000058246.6|predicted gene 10037
mm10_v2_chr7_+_30232310_30232350	0.224783	Hnf4a	ENSMUST00000108193.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I 	ENSMUST00000108192.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr11_-_101987004_101987013	0.219959	Hnf4a	ENSMUST00000107173.2|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) 	ENSMUST00000107172.1|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
mm10_v2_chr16_-_34514084_34514128	0.217444	Hnf4a	ENSMUST00000089655.5|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr19_-_6921753_6921803	0.210689	Hnf4a	ENSMUST00000173635.1|Esrra|ENSMUSG00000024955.7|estrogen related receptor, alpha
mm10_v2_chr11_-_61267177_61267198	0.207843	Hnf4a	ENSMUST00000066277.3|Aldh3a2|ENSMUSG00000010025.12|aldehyde dehydrogenase family 3, subfamily A2 	ENSMUST00000074127.7|Aldh3a2|ENSMUSG00000010025.12|aldehyde dehydrogenase family 3, subfamily A2 	ENSMUST00000108715.2|Aldh3a2|ENSMUSG00000010025.12|aldehyde dehydrogenase family 3, subfamily A2
mm10_v2_chr19_+_46152505_46152514	0.205697	Hnf4a	ENSMUST00000026254.7|Gbf1|ENSMUSG00000025224.8|golgi-specific brefeldin A-resistance factor 1
mm10_v2_chr5_+_31698050_31698067	0.204536	Hnf4a	ENSMUST00000114507.3|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein 	ENSMUST00000063813.4|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein 	ENSMUST00000071531.5|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein 	ENSMUST00000131995.1|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein
mm10_v2_chr9_-_57147034_57147034	0.202807	Hnf4a	ENSMUST00000034842.4|Neil1|ENSMUSG00000032298.7|nei endonuclease VIII-like 1 (E. coli)
mm10_v2_chr14_-_41006882_41006976	0.202669	Hnf4a	ENSMUST00000152837.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A 	ENSMUST00000134715.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chr3_+_107877227_107877252	0.202517	Hnf4a	ENSMUST00000037375.8|Eps8l3|ENSMUSG00000040600.8|EPS8-like 3
mm10_v2_chr4_+_110397661_110397708	0.201562	Hnf4a	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr7_-_31055594_31055659	0.19965	Hnf4a	ENSMUST00000039909.6|Fxyd1|ENSMUSG00000036570.8|FXYD domain-containing ion transport regulator 1
mm10_v2_chr12_-_79192248_79192293	0.19243	Hnf4a	ENSMUST00000161204.1|Rdh11|ENSMUSG00000066441.8|retinol dehydrogenase 11
mm10_v2_chrX_-_105929206_105929321	0.192301	Hnf4a	ENSMUST00000134381.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000154866.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr12_+_108605757_108605814	0.180236	Hnf4a	ENSMUST00000109854.2|Evl|ENSMUSG00000021262.8|Ena-vasodilator stimulated phosphoprotein
mm10_v2_chr3_-_121815212_121815302	0.177391	Hnf4a	ENSMUST00000029770.5|Abcd3|ENSMUSG00000028127.5|ATP-binding cassette, sub-family D (ALD), member 3
mm10_v2_chr1_+_172499948_172500047	0.176811	Hnf4a	ENSMUST00000111230.1|Tagln2|ENSMUSG00000026547.9|transgelin 2
mm10_v2_chr7_+_28833975_28834146	0.175258	Hnf4a	ENSMUST00000066723.8|Lgals4|ENSMUSG00000053964.10|lectin, galactose binding, soluble 4
mm10_v2_chr17_-_28486082_28486149	0.1752	Hnf4a	ENSMUST00000079413.3|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr10_-_127180579_127180645	0.174178	Hnf4a	ENSMUST00000095270.2|Slc26a10|ENSMUSG00000040441.8|solute carrier family 26, member 10
mm10_v2_chr4_+_110397764_110397808	0.174126	Hnf4a	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr1_+_24005505_24005505	0.172274	Hnf4a	ENSMUST00000181961.1|Gm26524|ENSMUSG00000096985.1|predicted gene, 26524
mm10_v2_chr2_-_164804876_164804894	0.168317	Hnf4a	ENSMUST00000103094.4|Acot8|ENSMUSG00000017307.9|acyl-CoA thioesterase 8 	ENSMUST00000017451.6|Acot8|ENSMUSG00000017307.9|acyl-CoA thioesterase 8
mm10_v2_chr7_+_112953955_112953975	0.158361	Hnf4a	ENSMUST00000182858.1|Rassf10|ENSMUSG00000098132.1|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10
mm10_v2_chr1_+_171213969_171214007	0.154678	Hnf4a	ENSMUST00000005820.4|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3 	ENSMUST00000075469.5|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3 	ENSMUST00000155126.1|Nr1i3|ENSMUSG00000005677.8|nuclear receptor subfamily 1, group I, member 3
mm10_v2_chr8_+_13037308_13037390	0.147904	Hnf4a	ENSMUST00000063820.5|F10|ENSMUSG00000031444.10|coagulation factor X 	ENSMUST00000033821.4|F10|ENSMUSG00000031444.10|coagulation factor X
mm10_v2_chr6_+_83156401_83156451	0.147088	Hnf4a	ENSMUST00000032106.4|1700003E16Rik|ENSMUSG00000030030.4|RIKEN cDNA 1700003E16 gene
mm10_v2_chr7_-_28598140_28598185	0.145013	Hnf4a	ENSMUST00000040531.8|Samd4b|ENSMUSG00000037513.9|sterile alpha motif domain containing 4B 	ENSMUST00000108283.1|Pak4|ENSMUSG00000030602.6|p21 protein (Cdc42/Rac)-activated kinase 4
mm10_v2_chr18_+_63708689_63708730	0.143183	Hnf4a	ENSMUST00000072726.5|Wdr7|ENSMUSG00000040560.9|WD repeat domain 7
mm10_v2_chr10_-_60752773_60752820	0.138387	Hnf4a	ENSMUST00000117513.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3 	ENSMUST00000119595.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3
mm10_v2_chr5_+_31697960_31698042	0.133228	Hnf4a	ENSMUST00000114515.2|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein
mm10_v2_chr2_+_110597298_110597316	0.132103	Hnf4a	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr11_+_70970181_70970213	0.130723	Hnf4a	ENSMUST00000018593.3|Rpain|ENSMUSG00000018449.6|RPA interacting protein
mm10_v2_chrX_-_105929333_105929382	0.130007	Hnf4a	ENSMUST00000134507.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000137453.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000150914.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr11_+_73199445_73199500	0.128543	Hnf4a	ENSMUST00000006105.6|Shpk|ENSMUSG00000005951.7|sedoheptulokinase
mm10_v2_chr17_-_26021853_26021866	0.127422	Hnf4a	ENSMUST00000118828.1|Rab11fip3|ENSMUSG00000037098.11|RAB11 family interacting protein 3 (class II)
mm10_v2_chr17_+_34605855_34605862	0.125572	Hnf4a	ENSMUST00000037489.8|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr11_-_3504766_3504833	0.125397	Hnf4a	ENSMUST00000044507.5|Inpp5j|ENSMUSG00000034570.6|inositol polyphosphate 5-phosphatase J
mm10_v2_chr4_+_134397380_134397471	0.12385	Hnf4a	ENSMUST00000105870.1|Pafah2|ENSMUSG00000037366.8|platelet-activating factor acetylhydrolase 2
mm10_v2_chr5_-_66514815_66514837	0.114093	Hnf4a	ENSMUST00000161879.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159357.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr4_-_129742275_129742312	0.109753	Hnf4a	ENSMUST00000066257.5|Khdrbs1|ENSMUSG00000028790.7|KH domain containing, RNA binding, signal transduction associated 1
mm10_v2_chr8_+_117095854_117095998	0.108445	Hnf4a	ENSMUST00000034308.8|Bcmo1|ENSMUSG00000031845.9|beta-carotene 15,15'-monooxygenase 	ENSMUST00000167370.1|Bcmo1|ENSMUSG00000031845.9|beta-carotene 15,15'-monooxygenase 	ENSMUST00000176860.1|Bcmo1|ENSMUSG00000031845.9|beta-carotene 15,15'-monooxygenase
mm10_v2_chr18_-_79109391_79109510	0.106109	Hnf4a	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr6_+_85431970_85432010	0.105505	Hnf4a	ENSMUST00000045693.7|Smyd5|ENSMUSG00000033706.7|SET and MYND domain containing 5
mm10_v2_chr1_+_37872206_37872233	0.101005	Hnf4a	ENSMUST00000041621.3|Lipt1|ENSMUSG00000037216.4|lipoyltransferase 1
mm10_v2_chr1_+_74284930_74285072	0.0976721	Hnf4a	ENSMUST00000113805.1|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000027370.6|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000087226.4|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia
mm10_v2_chr11_+_58104229_58104366	0.0923657	Hnf4a	ENSMUST00000108843.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8 	ENSMUST00000134896.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8
mm10_v2_chrX_+_48108912_48108964	0.0918145	Hnf4a	ENSMUST00000114998.1|Xpnpep2|ENSMUSG00000037005.10|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound 	ENSMUST00000115000.3|Xpnpep2|ENSMUSG00000037005.10|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
mm10_v2_chr4_+_130055010_130055047	0.0914494	Hnf4a	ENSMUST00000123617.1|Col16a1|ENSMUSG00000040690.9|collagen, type XVI, alpha 1
mm10_v2_chr1_+_85894281_85894281	0.0888423	Hnf4a	ENSMUST00000027425.9|Itm2c|ENSMUSG00000026223.9|integral membrane protein 2C
mm10_v2_chr11_+_58104138_58104191	0.088021	Hnf4a	ENSMUST00000020822.5|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8
mm10_v2_chr1_-_24005608_24005656	0.088001	Hnf4a	ENSMUST00000027338.3|1110058L19Rik|ENSMUSG00000026154.4|RIKEN cDNA 1110058L19 gene
mm10_v2_chr4_+_131873608_131873679	0.0868365	Hnf4a	ENSMUST00000053819.3|Srsf4|ENSMUSG00000028911.10|serine/arginine-rich splicing factor 4
mm10_v2_chrX_-_105929397_105929408	0.083887	Hnf4a	ENSMUST00000113573.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000130980.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr7_+_28392916_28393013	0.0827972	Hnf4a	ENSMUST00000003529.8|Paf1|ENSMUSG00000003437.8|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
mm10_v2_chr9_-_67043832_67043843	0.0779842	Hnf4a	ENSMUST00000113686.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr4_+_120854786_120854843	0.0772528	Hnf4a	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr16_+_14580221_14580221	0.0690379	Hnf4a	ENSMUST00000147024.1|A630010A05Rik|ENSMUSG00000075395.4|RIKEN cDNA A630010A05 gene
mm10_v2_chr11_+_55213783_55213814	0.064141	Hnf4a	ENSMUST00000108867.1|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1
mm10_v2_chr10_-_128919259_128919305	0.0638131	Hnf4a	ENSMUST00000149961.1|Rdh5|ENSMUSG00000025350.9|retinol dehydrogenase 5 	ENSMUST00000026406.7|Rdh5|ENSMUSG00000025350.9|retinol dehydrogenase 5
mm10_v2_chr12_+_21316385_21316400	0.0621796	Hnf4a	ENSMUST00000076813.6|Iah1|ENSMUSG00000062054.6|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
mm10_v2_chr6_-_113377376_113377396	0.0594149	Hnf4a	ENSMUST00000043333.2|Tada3|ENSMUSG00000048930.6|transcriptional adaptor 3
mm10_v2_chr11_+_22512088_22512088	0.054852	Hnf4a	ENSMUST00000059319.7|Tmem17|ENSMUSG00000049904.7|transmembrane protein 17
mm10_v2_chr1_+_63176818_63176919	0.0543791	Hnf4a	ENSMUST00000129339.1|Eef1b2|ENSMUSG00000025967.10|eukaryotic translation elongation factor 1 beta 2
mm10_v2_chr13_-_73328442_73328542	0.0540624	Hnf4a	ENSMUST00000022097.5|Ndufs6|ENSMUSG00000021606.7|NADH dehydrogenase (ubiquinone) Fe-S protein 6
mm10_v2_chr5_+_31697665_31697709	0.0508322	Hnf4a	ENSMUST00000080598.7|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein
mm10_v2_chr3_-_95133989_95134017	0.0497171	Hnf4a	ENSMUST00000172572.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1 	ENSMUST00000173462.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1
mm10_v2_chr11_-_23519181_23519233	0.0454272	Hnf4a	ENSMUST00000020527.5|1700093K21Rik|ENSMUSG00000020286.6|RIKEN cDNA 1700093K21 gene
mm10_v2_chr1_+_178319130_178319171	0.0444758	Hnf4a	ENSMUST00000027781.6|Cox20|ENSMUSG00000026500.6|COX20 Cox2 chaperone
mm10_v2_chr6_+_113282302_113282316	0.0419777	Hnf4a	ENSMUST00000041203.5|Cpne9|ENSMUSG00000030270.5|copine family member IX
mm10_v2_chr19_+_46501648_46501675	0.0381575	Hnf4a	ENSMUST00000026008.7|Trim8|ENSMUSG00000025034.8|tripartite motif-containing 8
mm10_v2_chr17_-_34743849_34743890	0.0358605	Hnf4a	ENSMUST00000069507.8|C4b|ENSMUSG00000073418.4|complement component 4B (Chido blood group)
mm10_v2_chr3_+_107278844_107278864	0.0273719	Hnf4a	ENSMUST00000145735.1|Lamtor5|ENSMUSG00000087260.1|late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
mm10_v2_chr17_-_35667546_35667618	0.0251771	Hnf4a	ENSMUST00000043674.8|Vars2|ENSMUSG00000038838.9|valyl-tRNA synthetase 2, mitochondrial (putative)
mm10_v2_chr3_-_127837419_127837505	0.0215301	Hnf4a	ENSMUST00000051737.6|Ap1ar|ENSMUSG00000074238.2|adaptor-related protein complex 1 associated regulatory protein
mm10_v2_chr13_-_41273977_41273977	0.0212748	Hnf4a	ENSMUST00000163881.1|Gm17364|ENSMUSG00000090853.1|predicted gene, 17364
mm10_v2_chr11_+_115814724_115814778	0.0166771	Hnf4a	ENSMUST00000106481.2|Tsen54|ENSMUSG00000020781.8|tRNA splicing endonuclease 54 homolog (S. cerevisiae) 	ENSMUST00000021134.3|Tsen54|ENSMUSG00000020781.8|tRNA splicing endonuclease 54 homolog (S. cerevisiae)
mm10_v2_chrX_-_16817339_16817373	0.0144976	Hnf4a	ENSMUST00000040820.6|Maob|ENSMUSG00000040147.8|monoamine oxidase B
mm10_v2_chr1_-_74284636_74284738	0.0123441	Hnf4a	ENSMUST00000178235.1|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein 	ENSMUST00000006462.7|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein
mm10_v2_chr8_-_41016295_41016321	0.0122264	Hnf4a	ENSMUST00000131965.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr3_-_67463828_67463943	0.0121491	Hnf4a	ENSMUST00000058981.2|Lxn|ENSMUSG00000047557.2|latexin
mm10_v2_chr9_-_67043743_67043820	0.00435631	Hnf4a	ENSMUST00000113695.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr2_-_77170592_77170645	0.00282374	Hnf4a	ENSMUST00000164114.2|Ccdc141|ENSMUSG00000044033.10|coiled-coil domain containing 141 	ENSMUST00000049544.7|Ccdc141|ENSMUSG00000044033.10|coiled-coil domain containing 141
mm10_v2_chr5_-_125294107_125294136	0.00128497	Hnf4a	ENSMUST00000127148.1|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1
