mm10_v2_chr17_+_35076902_35077073	9.87284	Hoxa11_Hoxc12	ENSMUST00000172494.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000172678.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000013910.4|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E
mm10_v2_chr1_+_43730593_43730633	7.9828	Hoxa11_Hoxc12	ENSMUST00000027217.8|1500015O10Rik|ENSMUSG00000026051.8|RIKEN cDNA 1500015O10 gene
mm10_v2_chr1_-_56978534_56978650	6.65975	Hoxa11_Hoxc12	ENSMUST00000177282.1|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr13_+_16014457_16014475	3.75762	Hoxa11_Hoxc12	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr1_+_178529113_178529134	3.44921	Hoxa11_Hoxc12	ENSMUST00000161017.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr6_+_108213086_108213123	3.23075	Hoxa11_Hoxc12	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr14_+_80000292_80000309	2.99225	Hoxa11_Hoxc12	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr17_+_8283762_8283852	2.72004	Hoxa11_Hoxc12	ENSMUST00000155364.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000046754.8|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000124023.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1
mm10_v2_chr16_-_45408955_45409053	2.15442	Hoxa11_Hoxc12	ENSMUST00000163230.1|Cd200|ENSMUSG00000022661.8|CD200 antigen
mm10_v2_chr2_+_28205648_28205672	2.12518	Hoxa11_Hoxc12	ENSMUST00000102879.3|Olfm1|ENSMUSG00000026833.12|olfactomedin 1 	ENSMUST00000028177.4|Olfm1|ENSMUSG00000026833.12|olfactomedin 1
mm10_v2_chr6_-_55681257_55681271	2.10334	Hoxa11_Hoxc12	ENSMUST00000044767.8|Neurod6|ENSMUSG00000037984.8|neurogenic differentiation 6
mm10_v2_chr15_-_43869993_43870058	2.09671	Hoxa11_Hoxc12	ENSMUST00000067469.4|Tmem74|ENSMUSG00000054409.4|transmembrane protein 74
mm10_v2_chr7_-_142661858_142661880	1.805	Hoxa11_Hoxc12	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr16_-_57231434_57231509	1.76778	Hoxa11_Hoxc12	ENSMUST00000023431.6|Tbc1d23|ENSMUSG00000022749.6|TBC1 domain family, member 23
mm10_v2_chr18_+_69346143_69346203	1.73281	Hoxa11_Hoxc12	ENSMUST00000114980.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr5_+_66968961_66969132	1.67495	Hoxa11_Hoxc12	ENSMUST00000132991.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr3_-_117360876_117360876	1.64113	Hoxa11_Hoxc12	ENSMUST00000061071.8|D3Bwg0562e|ENSMUSG00000044667.8|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm10_v2_chr13_-_54749849_54749893	1.63719	Hoxa11_Hoxc12	ENSMUST00000135343.1|Gprin1|ENSMUSG00000069227.4|G protein-regulated inducer of neurite outgrowth 1
mm10_v2_chr14_+_27622433_27622543	1.60339	Hoxa11_Hoxc12	ENSMUST00000090302.5|Erc2|ENSMUSG00000040640.9|ELKS/RAB6-interacting/CAST family member 2
mm10_v2_chr11_-_115628125_115628164	1.55276	Hoxa11_Hoxc12	ENSMUST00000155709.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000021089.4|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr11_-_115628260_115628298	1.55036	Hoxa11_Hoxc12	ENSMUST00000178003.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr11_-_115627948_115628122	1.54058	Hoxa11_Hoxc12	ENSMUST00000154623.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000106503.3|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000141614.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr7_+_4460687_4460730	1.47145	Hoxa11_Hoxc12	ENSMUST00000167298.1|Eps8l1|ENSMUSG00000006154.7|EPS8-like 1 	ENSMUST00000171445.1|Eps8l1|ENSMUSG00000006154.7|EPS8-like 1
mm10_v2_chr16_-_74411776_74411792	1.3853	Hoxa11_Hoxc12	ENSMUST00000116586.2|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr9_+_53771499_53771535	1.38127	Hoxa11_Hoxc12	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr9_-_55919605_55919605	1.32121	Hoxa11_Hoxc12	ENSMUST00000037408.8|Scaper|ENSMUSG00000034007.9|S phase cyclin A-associated protein in the ER
mm10_v2_chr18_-_43393346_43393381	1.3145	Hoxa11_Hoxc12	ENSMUST00000025379.7|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chrX_+_73064787_73064787	1.26115	Hoxa11_Hoxc12	ENSMUST00000060418.6|Pnma3|ENSMUSG00000046287.6|paraneoplastic antigen MA3
mm10_v2_chr15_-_101850778_101850792	1.20673	Hoxa11_Hoxc12	ENSMUST00000023790.3|Krt1|ENSMUSG00000046834.6|keratin 1
mm10_v2_chr17_+_6270475_6270475	1.19355	Hoxa11_Hoxc12	ENSMUST00000088940.4|Tmem181a|ENSMUSG00000038141.8|transmembrane protein 181A
mm10_v2_chr19_+_4097392_4097415	1.14321	Hoxa11_Hoxc12	ENSMUST00000174514.1|Cdk2ap2|ENSMUSG00000024856.4|CDK2-associated protein 2 	ENSMUST00000174149.1|Cdk2ap2|ENSMUSG00000024856.4|CDK2-associated protein 2
mm10_v2_chrX_+_41401304_41401427	1.07739	Hoxa11_Hoxc12	ENSMUST00000076349.5|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr18_-_38209762_38209786	1.0749	Hoxa11_Hoxc12	ENSMUST00000057185.6|Pcdh1|ENSMUSG00000051375.9|protocadherin 1
mm10_v2_chr17_-_6477102_6477102	1.06975	Hoxa11_Hoxc12	ENSMUST00000167717.2|Tmem181b-ps|ENSMUSG00000079733.3|transmembrane protein 181B, pseudogene
mm10_v2_chrX_+_41401128_41401200	0.997283	Hoxa11_Hoxc12	ENSMUST00000115103.2|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr8_+_40307458_40307458	0.909312	Hoxa11_Hoxc12	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr19_+_58943413_58943431	0.890654	Hoxa11_Hoxc12	ENSMUST00000054280.6|Eno4|ENSMUSG00000048029.7|enolase 4
mm10_v2_chr18_+_37333853_37333946	0.831717	Hoxa11_Hoxc12	ENSMUST00000061717.2|Pcdhb6|ENSMUSG00000051678.3|protocadherin beta 6
mm10_v2_chr18_+_37655891_37655915	0.826453	Hoxa11_Hoxc12	ENSMUST00000097608.2|3222401L13Rik|ENSMUSG00000073590.2|RIKEN cDNA 3222401L13 gene
mm10_v2_chr4_+_130913264_130913358	0.801757	Hoxa11_Hoxc12	ENSMUST00000156225.1|Laptm5|ENSMUSG00000028581.11|lysosomal-associated protein transmembrane 5 	ENSMUST00000156742.1|Laptm5|ENSMUSG00000028581.11|lysosomal-associated protein transmembrane 5
mm10_v2_chr4_+_130913120_130913137	0.797511	Hoxa11_Hoxc12	ENSMUST00000151698.1|Laptm5|ENSMUSG00000028581.11|lysosomal-associated protein transmembrane 5
mm10_v2_chr1_-_189922338_189922363	0.790305	Hoxa11_Hoxc12	ENSMUST00000027897.7|Smyd2|ENSMUSG00000026603.7|SET and MYND domain containing 2
mm10_v2_chr4_+_102741287_102741298	0.774982	Hoxa11_Hoxc12	ENSMUST00000097948.2|Sgip1|ENSMUSG00000028524.15|SH3-domain GRB2-like (endophilin) interacting protein 1
mm10_v2_chr10_+_90071095_90071117	0.763301	Hoxa11_Hoxc12	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr17_-_13761441_13761601	0.73929	Hoxa11_Hoxc12	ENSMUST00000127032.1|Tcte2|ENSMUSG00000038347.8|t-complex-associated testis expressed 2
mm10_v2_chr13_+_98263242_98263302	0.720462	Hoxa11_Hoxc12	ENSMUST00000022164.8|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2 	ENSMUST00000150352.1|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2
mm10_v2_chr13_+_109685994_109686156	0.714075	Hoxa11_Hoxc12	ENSMUST00000074103.5|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr13_+_98263187_98263221	0.685435	Hoxa11_Hoxc12	ENSMUST00000091356.3|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2 	ENSMUST00000123924.1|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2
mm10_v2_chr13_+_98263105_98263177	0.658626	Hoxa11_Hoxc12	ENSMUST00000150916.1|Ankra2|ENSMUSG00000021661.9|ankyrin repeat, family A (RFXANK-like), 2
mm10_v2_chr11_+_82045705_82045721	0.617777	Hoxa11_Hoxc12	ENSMUST00000021011.2|Ccl7|ENSMUSG00000035373.2|chemokine (C-C motif) ligand 7
mm10_v2_chr1_-_93101825_93101849	0.617123	Hoxa11_Hoxc12	ENSMUST00000112958.2|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A
mm10_v2_chr16_+_23224724_23224804	0.597257	Hoxa11_Hoxc12	ENSMUST00000023601.7|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr6_+_96115249_96115311	0.58881	Hoxa11_Hoxc12	ENSMUST00000075080.5|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr2_+_131133497_131133497	0.51447	Hoxa11_Hoxc12	ENSMUST00000110225.1|Gm11037|ENSMUSG00000079039.1|predicted gene 11037
mm10_v2_chr2_+_23068168_23068241	0.512082	Hoxa11_Hoxc12	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr11_-_95309557_95309602	0.509996	Hoxa11_Hoxc12	ENSMUST00000092766.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000072621.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chr13_-_12464925_12464949	0.488306	Hoxa11_Hoxc12	ENSMUST00000124888.1|Lgals8|ENSMUSG00000057554.7|lectin, galactose binding, soluble 8
mm10_v2_chr19_+_5406815_5406880	0.469279	Hoxa11_Hoxc12	ENSMUST00000174412.1|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene 	ENSMUST00000153017.2|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene
mm10_v2_chr8_+_25720054_25720099	0.463814	Hoxa11_Hoxc12	ENSMUST00000068916.8|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B 	ENSMUST00000139836.1|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B
mm10_v2_chr3_+_32436376_32436376	0.463385	Hoxa11_Hoxc12	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr5_-_73256555_73256636	0.438975	Hoxa11_Hoxc12	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr13_-_66851513_66851513	0.428177	Hoxa11_Hoxc12	ENSMUST00000169322.1|Gm17404|ENSMUSG00000095206.1|predicted gene, 17404
mm10_v2_chr17_-_24455265_24455345	0.413056	Hoxa11_Hoxc12	ENSMUST00000056032.7|E4f1|ENSMUSG00000024137.8|E4F transcription factor 1
mm10_v2_chr13_-_99344652_99344706	0.406377	Hoxa11_Hoxc12	ENSMUST00000022153.6|Ptcd2|ENSMUSG00000021650.6|pentatricopeptide repeat domain 2
mm10_v2_chr2_-_104712122_104712180	0.397422	Hoxa11_Hoxc12	ENSMUST00000111118.1|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1 	ENSMUST00000028597.3|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1
mm10_v2_chrX_+_20364481_20364616	0.381514	Hoxa11_Hoxc12	ENSMUST00000033372.6|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115391.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115387.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human)
mm10_v2_chr4_-_129378116_129378116	0.381172	Hoxa11_Hoxc12	ENSMUST00000030610.2|Zbtb8a|ENSMUSG00000028807.2|zinc finger and BTB domain containing 8a
mm10_v2_chr14_+_49172202_49172254	0.356325	Hoxa11_Hoxc12	ENSMUST00000153488.1|Naa30|ENSMUSG00000036282.8|N(alpha)-acetyltransferase 30, NatC catalytic subunit
mm10_v2_chr19_-_46338632_46338670	0.332038	Hoxa11_Hoxc12	ENSMUST00000051234.8|Cuedc2|ENSMUSG00000036748.9|CUE domain containing 2 	ENSMUST00000167861.1|Cuedc2|ENSMUSG00000036748.9|CUE domain containing 2
mm10_v2_chr12_+_78226627_78226655	0.322513	Hoxa11_Hoxc12	ENSMUST00000110388.2|Gphn|ENSMUSG00000047454.5|gephyrin 	ENSMUST00000052472.4|Gphn|ENSMUSG00000047454.5|gephyrin
mm10_v2_chr3_+_88621102_88621130	0.321089	Hoxa11_Hoxc12	ENSMUST00000029694.7|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2 	ENSMUST00000176804.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr7_+_126649297_126649344	0.320766	Hoxa11_Hoxc12	ENSMUST00000032956.8|Ccdc101|ENSMUSG00000030714.8|coiled-coil domain containing 101
mm10_v2_chr11_-_62457772_62457835	0.316418	Hoxa11_Hoxc12	ENSMUST00000127471.2|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1
mm10_v2_chr11_-_62789445_62789478	0.302959	Hoxa11_Hoxc12	ENSMUST00000054654.6|Zfp286|ENSMUSG00000047342.10|zinc finger protein 286
mm10_v2_chrX_-_165004829_165004829	0.294128	Hoxa11_Hoxc12	ENSMUST00000114890.2|Gm17604|ENSMUSG00000079600.2|predicted gene, 17604
mm10_v2_chr9_-_44407526_44407551	0.289113	Hoxa11_Hoxc12	ENSMUST00000034623.6|Trappc4|ENSMUSG00000032112.9|trafficking protein particle complex 4
mm10_v2_chr3_+_79885930_79886002	0.27878	Hoxa11_Hoxc12	ENSMUST00000029567.8|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr3_-_88458876_88459043	0.274126	Hoxa11_Hoxc12	ENSMUST00000147200.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000169222.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr11_-_62789402_62789443	0.266135	Hoxa11_Hoxc12	ENSMUST00000108705.1|Zfp286|ENSMUSG00000047342.10|zinc finger protein 286
mm10_v2_chr7_-_141434532_141434605	0.247597	Hoxa11_Hoxc12	ENSMUST00000133021.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000106007.3|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000150026.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000133206.2|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr3_+_89177463_89177543	0.240055	Hoxa11_Hoxc12	ENSMUST00000029684.8|Scamp3|ENSMUSG00000028049.9|secretory carrier membrane protein 3 	ENSMUST00000120697.1|Scamp3|ENSMUSG00000028049.9|secretory carrier membrane protein 3 	ENSMUST00000098941.4|Scamp3|ENSMUSG00000028049.9|secretory carrier membrane protein 3
mm10_v2_chr7_-_73537621_73537766	0.237865	Hoxa11_Hoxc12	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr6_-_118455475_118455528	0.234137	Hoxa11_Hoxc12	ENSMUST00000161519.1|Zfp248|ENSMUSG00000030145.8|zinc finger protein 248 	ENSMUST00000069292.7|Zfp248|ENSMUSG00000030145.8|zinc finger protein 248
mm10_v2_chr7_-_126649556_126649580	0.228477	Hoxa11_Hoxc12	ENSMUST00000084587.1|2510046G10Rik|ENSMUSG00000066175.1|RIKEN cDNA 2510046G10 gene
mm10_v2_chr2_-_120970706_120970761	0.228469	Hoxa11_Hoxc12	ENSMUST00000028728.5|Ubr1|ENSMUSG00000027272.5|ubiquitin protein ligase E3 component n-recognin 1
mm10_v2_chr11_+_75732869_75732975	0.224321	Hoxa11_Hoxc12	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr3_+_66219909_66219927	0.223171	Hoxa11_Hoxc12	ENSMUST00000029421.5|Ptx3|ENSMUSG00000027832.5|pentraxin related gene
mm10_v2_chr5_-_143292356_143292356	0.211912	Hoxa11_Hoxc12	ENSMUST00000180336.1|Zfp853|ENSMUSG00000093910.1|zinc finger protein 853
mm10_v2_chr7_-_141435327_141435397	0.209901	Hoxa11_Hoxc12	ENSMUST00000138865.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr16_+_75592844_75592928	0.209373	Hoxa11_Hoxc12	ENSMUST00000114249.1|Rbm11|ENSMUSG00000032940.10|RNA binding motif protein 11 	ENSMUST00000046378.7|Rbm11|ENSMUSG00000032940.10|RNA binding motif protein 11 	ENSMUST00000114253.1|Rbm11|ENSMUSG00000032940.10|RNA binding motif protein 11
mm10_v2_chr19_-_4012656_4012806	0.207763	Hoxa11_Hoxc12	ENSMUST00000134479.1|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1 	ENSMUST00000128787.1|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1 	ENSMUST00000133474.1|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1 	ENSMUST00000136921.1|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1 	ENSMUST00000042497.7|Ndufv1|ENSMUSG00000037916.7|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm10_v2_chr13_-_66852017_66852017	0.186479	Hoxa11_Hoxc12	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chr16_+_96235801_96235801	0.185593	Hoxa11_Hoxc12	ENSMUST00000113800.2|B3galt5|ENSMUSG00000074892.3|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm10_v2_chr8_+_104250925_104250940	0.182883	Hoxa11_Hoxc12	ENSMUST00000098464.4|Cklf|ENSMUSG00000054400.9|chemokine-like factor
mm10_v2_chr6_-_87809757_87809787	0.162032	Hoxa11_Hoxc12	ENSMUST00000032134.7|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family
mm10_v2_chr8_+_105225145_105225193	0.148506	Hoxa11_Hoxc12	ENSMUST00000034361.3|D230025D16Rik|ENSMUSG00000031889.3|RIKEN cDNA D230025D16 gene
mm10_v2_chr6_-_29216301_29216364	0.13806	Hoxa11_Hoxc12	ENSMUST00000162739.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1 	ENSMUST00000162099.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1 	ENSMUST00000159124.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1
mm10_v2_chr11_-_72267141_72267222	0.13591	Hoxa11_Hoxc12	ENSMUST00000137701.1|Slc13a5|ENSMUSG00000020805.7|solute carrier family 13 (sodium-dependent citrate transporter), member 5
mm10_v2_chr12_-_20900867_20900867	0.128011	Hoxa11_Hoxc12	ENSMUST00000079237.5|Zfp125|ENSMUSG00000069755.4|zinc finger protein 125
mm10_v2_chr7_-_46795881_46796085	0.124285	Hoxa11_Hoxc12	ENSMUST00000107653.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000107654.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000014562.7|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000152759.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human)
mm10_v2_chr6_-_29216277_29216292	0.119758	Hoxa11_Hoxc12	ENSMUST00000162215.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1
mm10_v2_chr4_+_108328136_108328180	0.118309	Hoxa11_Hoxc12	ENSMUST00000131656.1|Selrc1|ENSMUSG00000048351.8|Sel1 repeat containing 1
mm10_v2_chr6_+_40325471_40325501	0.118249	Hoxa11_Hoxc12	ENSMUST00000031977.8|Agk|ENSMUSG00000029916.8|acylglycerol kinase
mm10_v2_chr4_-_45408646_45408768	0.1098	Hoxa11_Hoxc12	ENSMUST00000153904.1|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51 	ENSMUST00000132815.2|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51 	ENSMUST00000107796.1|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51 	ENSMUST00000116341.3|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51
mm10_v2_chr3_-_88459047_88459101	0.108371	Hoxa11_Hoxc12	ENSMUST00000165898.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000127436.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr11_+_55213783_55213814	0.107909	Hoxa11_Hoxc12	ENSMUST00000108867.1|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1
mm10_v2_chr5_-_116024475_116024508	0.0949864	Hoxa11_Hoxc12	ENSMUST00000111999.1|Prkab1|ENSMUSG00000029513.8|protein kinase, AMP-activated, beta 1 non-catalytic subunit
mm10_v2_chr12_-_27160311_27160476	0.0848541	Hoxa11_Hoxc12	ENSMUST00000182473.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000177636.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000183238.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr17_+_22361453_22361522	0.0729449	Hoxa11_Hoxc12	ENSMUST00000149699.1|Zfp758|ENSMUSG00000044501.11|zinc finger protein 758 	ENSMUST00000088765.2|Zfp758|ENSMUSG00000044501.11|zinc finger protein 758 	ENSMUST00000072477.4|Zfp758|ENSMUSG00000044501.11|zinc finger protein 758 	ENSMUST00000121315.1|Zfp758|ENSMUSG00000044501.11|zinc finger protein 758
mm10_v2_chr16_-_23225334_23225368	0.0496844	Hoxa11_Hoxc12	ENSMUST00000055369.4|BC106179|ENSMUSG00000045231.4|cDNA sequence BC106179
mm10_v2_chr7_+_100372224_100372383	0.0458336	Hoxa11_Hoxc12	ENSMUST00000051777.8|C2cd3|ENSMUSG00000047248.13|C2 calcium-dependent domain containing 3 	ENSMUST00000098259.4|C2cd3|ENSMUSG00000047248.13|C2 calcium-dependent domain containing 3
mm10_v2_chr19_-_7341792_7341829	0.0147648	Hoxa11_Hoxc12	ENSMUST00000164205.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000165286.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000168324.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000032557.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr19_-_7341848_7341863	0.0115605	Hoxa11_Hoxc12	ENSMUST00000171393.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr10_-_120979327_120979373	0.00163082	Hoxa11_Hoxc12	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
