mm10_v2_chr5_+_139543889_139543904	4.84001	Hoxa2	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr5_-_24527276_24527276	2.15621	Hoxa2	ENSMUST00000088311.4|Gbx1|ENSMUSG00000067724.4|gastrulation brain homeobox 1
mm10_v2_chr8_-_4779513_4779591	2.11176	Hoxa2	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr14_-_34374617_34374789	2.07446	Hoxa2	ENSMUST00000023826.4|Sncg|ENSMUSG00000023064.4|synuclein, gamma
mm10_v2_chr9_-_106158109_106158138	1.9864	Hoxa2	ENSMUST00000159809.1|Glyctk|ENSMUSG00000020258.9|glycerate kinase 	ENSMUST00000162562.1|Glyctk|ENSMUSG00000020258.9|glycerate kinase 	ENSMUST00000036382.6|Glyctk|ENSMUSG00000020258.9|glycerate kinase 	ENSMUST00000112543.2|Glyctk|ENSMUSG00000020258.9|glycerate kinase
mm10_v2_chr12_+_109747903_109748051	1.97351	Hoxa2	ENSMUST00000183084.1|Mirg|ENSMUSG00000097391.2|miRNA containing gene 	ENSMUST00000182300.1|Mirg|ENSMUSG00000097391.2|miRNA containing gene
mm10_v2_chr2_-_117342709_117342822	1.9414	Hoxa2	ENSMUST00000173541.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000172901.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000173252.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1
mm10_v2_chr2_-_117342949_117343001	1.89632	Hoxa2	ENSMUST00000102534.4|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1
mm10_v2_chr2_-_117342831_117342896	1.75424	Hoxa2	ENSMUST00000178884.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1
mm10_v2_chr13_+_117220584_117220637	1.6984	Hoxa2	ENSMUST00000022242.7|Emb|ENSMUSG00000021728.7|embigin
mm10_v2_chr3_+_55782500_55782521	1.55057	Hoxa2	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr10_-_96409038_96409038	1.49986	Hoxa2	ENSMUST00000179683.1|Gm20091|ENSMUSG00000094249.1|predicted gene, 20091
mm10_v2_chr8_-_87959560_87959595	1.4675	Hoxa2	ENSMUST00000109655.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr4_+_134510999_134511076	1.38655	Hoxa2	ENSMUST00000105866.2|Aunip|ENSMUSG00000078521.2|aurora kinase A and ninein interacting protein
mm10_v2_chr16_-_23890805_23890861	1.36176	Hoxa2	ENSMUST00000004480.3|Sst|ENSMUSG00000004366.3|somatostatin
mm10_v2_chr10_-_92162753_92162765	1.32967	Hoxa2	ENSMUST00000182197.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr6_+_5390387_5390427	1.30953	Hoxa2	ENSMUST00000183358.1|Asb4|ENSMUSG00000042607.9|ankyrin repeat and SOCS box-containing 4
mm10_v2_chr17_-_32166879_32166898	1.29737	Hoxa2	ENSMUST00000087723.3|Notch3|ENSMUSG00000038146.7|notch 3
mm10_v2_chr4_+_105790534_105790534	1.27723	Hoxa2	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr11_-_100356116_100356128	1.24849	Hoxa2	ENSMUST00000138603.2|Hap1|ENSMUSG00000006930.9|huntingtin-associated protein 1
mm10_v2_chrX_-_103483205_103483225	1.24344	Hoxa2	ENSMUST00000127786.2|Xist|ENSMUSG00000086503.2|inactive X specific transcripts
mm10_v2_chr2_+_103957976_103958021	1.21604	Hoxa2	ENSMUST00000156813.1|Lmo2|ENSMUSG00000032698.9|LIM domain only 2 	ENSMUST00000170926.1|Lmo2|ENSMUSG00000032698.9|LIM domain only 2
mm10_v2_chr4_-_35157404_35157500	1.20745	Hoxa2	ENSMUST00000102975.3|Mob3b|ENSMUSG00000073910.4|MOB kinase activator 3B
mm10_v2_chr4_+_46450892_46450903	1.19749	Hoxa2	ENSMUST00000102926.4|Anp32b|ENSMUSG00000028333.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
mm10_v2_chr11_-_100356078_100356096	1.19616	Hoxa2	ENSMUST00000103124.4|Hap1|ENSMUSG00000006930.9|huntingtin-associated protein 1
mm10_v2_chr7_+_144838590_144838614	1.17985	Hoxa2	ENSMUST00000105898.1|Fgf3|ENSMUSG00000031074.8|fibroblast growth factor 3
mm10_v2_chr9_-_21760275_21760294	1.17765	Hoxa2	ENSMUST00000098942.4|Spc24|ENSMUSG00000074476.5|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr1_-_119053339_119053370	1.14113	Hoxa2	ENSMUST00000161301.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2 	ENSMUST00000161451.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2 	ENSMUST00000162607.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr4_-_92191749_92191749	1.09967	Hoxa2	ENSMUST00000123179.1|Gm12666|ENSMUSG00000066107.6|predicted gene 12666
mm10_v2_chr4_+_15881255_15881272	1.057	Hoxa2	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr4_-_42084291_42084291	1.0301	Hoxa2	ENSMUST00000177937.1|Gm21968|ENSMUSG00000095881.1|predicted gene, 21968
mm10_v2_chr15_+_39006272_39006365	1.01857	Hoxa2	ENSMUST00000179165.1|Fzd6|ENSMUSG00000022297.8|frizzled homolog 6 (Drosophila) 	ENSMUST00000022906.7|Fzd6|ENSMUSG00000022297.8|frizzled homolog 6 (Drosophila)
mm10_v2_chr10_-_63421739_63421739	0.998481	Hoxa2	ENSMUST00000054760.4|Gm7075|ENSMUSG00000048185.4|predicted gene 7075
mm10_v2_chrX_+_110814390_110814413	0.997455	Hoxa2	ENSMUST00000078229.3|Pou3f4|ENSMUSG00000056854.3|POU domain, class 3, transcription factor 4
mm10_v2_chr10_+_4611971_4612021	0.995765	Hoxa2	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr5_+_10236829_10236829	0.972376	Hoxa2	ENSMUST00000101606.3|Gm10482|ENSMUSG00000073226.3|predicted gene 10482
mm10_v2_chr19_+_23723279_23723279	0.963456	Hoxa2	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr19_-_10203880_10204169	0.96212	Hoxa2	ENSMUST00000142241.1|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000116542.2|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000025651.5|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000156291.1|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1
mm10_v2_chr8_-_105471481_105471526	0.96182	Hoxa2	ENSMUST00000014990.6|Tppp3|ENSMUSG00000014846.6|tubulin polymerization-promoting protein family member 3
mm10_v2_chr5_+_115908644_115908734	0.950309	Hoxa2	ENSMUST00000141101.1|Cit|ENSMUSG00000029516.13|citron
mm10_v2_chr11_-_58801944_58801968	0.934416	Hoxa2	ENSMUST00000094156.4|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B 	ENSMUST00000060581.3|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B
mm10_v2_chr2_-_149798701_149798743	0.923216	Hoxa2	ENSMUST00000148202.1|Gm14133|ENSMUSG00000087029.1|predicted gene 14133 	ENSMUST00000139471.1|Gm14133|ENSMUSG00000087029.1|predicted gene 14133
mm10_v2_chr2_-_69206133_69206144	0.874151	Hoxa2	ENSMUST00000112320.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr1_-_119053619_119053638	0.873671	Hoxa2	ENSMUST00000062483.8|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chrX_+_96455359_96455411	0.864662	Hoxa2	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr1_-_133907053_133907172	0.860721	Hoxa2	ENSMUST00000149380.1|Optc|ENSMUSG00000010311.9|opticin 	ENSMUST00000124051.2|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr15_+_59648350_59648369	0.858808	Hoxa2	ENSMUST00000067543.6|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
mm10_v2_chr8_-_110902442_110902467	0.857447	Hoxa2	ENSMUST00000041382.6|Fuk|ENSMUSG00000033703.8|fucokinase
mm10_v2_chr3_+_122044428_122044469	0.849098	Hoxa2	ENSMUST00000013995.8|Abca4|ENSMUSG00000028125.8|ATP-binding cassette, sub-family A (ABC1), member 4
mm10_v2_chr17_+_66123520_66123582	0.837273	Hoxa2	ENSMUST00000163605.2|Ddx11|ENSMUSG00000035842.9|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
mm10_v2_chr9_+_51621425_51621425	0.83414	Hoxa2	ENSMUST00000089534.4|Gm7293|ENSMUSG00000078308.1|predicted gene 7293
mm10_v2_chr7_+_100495987_100496079	0.831039	Hoxa2	ENSMUST00000133044.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr11_-_106998483_106998491	0.82212	Hoxa2	ENSMUST00000124541.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chrX_-_102157065_102157096	0.815823	Hoxa2	ENSMUST00000056904.2|Ercc6l|ENSMUSG00000051220.2|excision repair cross-complementing rodent repair deficiency complementation group 6 like
mm10_v2_chr9_-_85327110_85327128	0.80397	Hoxa2	ENSMUST00000034802.8|Fam46a|ENSMUSG00000032265.8|family with sequence similarity 46, member A
mm10_v2_chr2_-_69206146_69206194	0.8011	Hoxa2	ENSMUST00000127243.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000149643.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000167875.2|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000005365.8|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr9_+_58134017_58134075	0.786441	Hoxa2	ENSMUST00000134955.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000147134.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000170397.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr1_-_133906973_133907014	0.785262	Hoxa2	ENSMUST00000126123.1|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr17_-_71310952_71310969	0.784355	Hoxa2	ENSMUST00000024849.9|Emilin2|ENSMUSG00000024053.10|elastin microfibril interfacer 2
mm10_v2_chr7_+_142460834_142460886	0.781574	Hoxa2	ENSMUST00000018963.4|Lsp1|ENSMUSG00000018819.4|lymphocyte specific 1 	ENSMUST00000105967.1|Lsp1|ENSMUSG00000018819.4|lymphocyte specific 1
mm10_v2_chr1_-_175688353_175688353	0.78102	Hoxa2	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr14_-_61037937_61037998	0.755525	Hoxa2	ENSMUST00000111236.2|Tnfrsf19|ENSMUSG00000060548.6|tumor necrosis factor receptor superfamily, member 19
mm10_v2_chr18_-_61259987_61259987	0.751306	Hoxa2	ENSMUST00000170335.2|Rps2-ps10|ENSMUSG00000091957.2|ribosomal protein S2, pseudogene 10
mm10_v2_chr15_-_84447037_84447097	0.742637	Hoxa2	ENSMUST00000080751.2|1810041L15Rik|ENSMUSG00000062760.4|RIKEN cDNA 1810041L15 gene
mm10_v2_chr5_-_98566762_98566762	0.736546	Hoxa2	ENSMUST00000086912.4|1700010H22Rik|ENSMUSG00000067101.4|RIKEN cDNA 1700010H22 gene
mm10_v2_chr2_+_181763315_181763335	0.728359	Hoxa2	ENSMUST00000081125.4|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr17_+_78491549_78491565	0.718239	Hoxa2	ENSMUST00000079363.4|Gm10093|ENSMUSG00000061062.4|predicted pseudogene 10093
mm10_v2_chr9_+_58129062_58129088	0.714646	Hoxa2	ENSMUST00000085677.2|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr9_+_58129321_58129349	0.711044	Hoxa2	ENSMUST00000034880.3|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr5_+_115235836_115235836	0.709526	Hoxa2	ENSMUST00000081497.6|Pop5|ENSMUSG00000060152.8|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm10_v2_chr3_+_32708546_32708738	0.704252	Hoxa2	ENSMUST00000029214.7|Actl6a|ENSMUSG00000027671.8|actin-like 6A
mm10_v2_chr19_-_43912392_43912392	0.692709	Hoxa2	ENSMUST00000026209.4|Dnmbp|ENSMUSG00000025195.8|dynamin binding protein
mm10_v2_chr4_+_57845240_57845265	0.691155	Hoxa2	ENSMUST00000102903.1|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2 	ENSMUST00000107598.3|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2
mm10_v2_chr5_+_92683625_92683648	0.689422	Hoxa2	ENSMUST00000168878.1|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr15_+_79030874_79030933	0.683452	Hoxa2	ENSMUST00000171999.1|Gcat|ENSMUSG00000006378.7|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase) 	ENSMUST00000006544.7|Gcat|ENSMUSG00000006378.7|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
mm10_v2_chr5_-_130024280_130024381	0.67911	Hoxa2	ENSMUST00000161640.1|Asl|ENSMUSG00000025533.9|argininosuccinate lyase 	ENSMUST00000161884.1|Asl|ENSMUSG00000025533.9|argininosuccinate lyase 	ENSMUST00000161094.1|Asl|ENSMUSG00000025533.9|argininosuccinate lyase
mm10_v2_chr11_+_94327984_94328029	0.677433	Hoxa2	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr3_-_116253467_116253484	0.676736	Hoxa2	ENSMUST00000090473.5|Gpr88|ENSMUSG00000068696.5|G-protein coupled receptor 88
mm10_v2_chr4_-_42581621_42581621	0.67207	Hoxa2	ENSMUST00000178742.1|Gm10592|ENSMUSG00000096260.1|predicted gene 10592
mm10_v2_chr2_-_101883010_101883023	0.670175	Hoxa2	ENSMUST00000154525.1|Prr5l|ENSMUSG00000032841.9|proline rich 5 like
mm10_v2_chr16_+_34784917_34784935	0.669055	Hoxa2	ENSMUST00000023538.8|Mylk|ENSMUSG00000022836.10|myosin, light polypeptide kinase
mm10_v2_chr15_-_81729864_81729919	0.663762	Hoxa2	ENSMUST00000171115.1|Rangap1|ENSMUSG00000022391.9|RAN GTPase activating protein 1 	ENSMUST00000170134.1|Rangap1|ENSMUSG00000022391.9|RAN GTPase activating protein 1 	ENSMUST00000052374.5|Rangap1|ENSMUSG00000022391.9|RAN GTPase activating protein 1
mm10_v2_chr9_-_71485893_71485975	0.655418	Hoxa2	ENSMUST00000034720.5|Polr2m|ENSMUSG00000032199.6|polymerase (RNA) II (DNA directed) polypeptide M
mm10_v2_chr9_+_58134535_58134810	0.653577	Hoxa2	ENSMUST00000128378.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000150820.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000167479.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000134450.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr5_-_30945393_30945480	0.6534	Hoxa2	ENSMUST00000031051.6|Cgref1|ENSMUSG00000029161.6|cell growth regulator with EF hand domain 1
mm10_v2_chr10_-_128804353_128804374	0.650043	Hoxa2	ENSMUST00000051011.7|Tmem198b|ENSMUSG00000047090.7|transmembrane protein 198b
mm10_v2_chr3_+_124321031_124321113	0.641023	Hoxa2	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr15_-_78773452_78773486	0.63093	Hoxa2	ENSMUST00000018313.5|Mfng|ENSMUSG00000018169.6|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm10_v2_chr3_-_107931817_107931885	0.630015	Hoxa2	ENSMUST00000004137.4|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chr2_+_156840966_156841017	0.626435	Hoxa2	ENSMUST00000109564.1|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr10_-_26078987_26079052	0.621517	Hoxa2	ENSMUST00000066049.6|Tmem200a|ENSMUSG00000049420.8|transmembrane protein 200A
mm10_v2_chr7_+_100537192_100537232	0.616252	Hoxa2	ENSMUST00000120454.1|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr12_-_16800886_16800931	0.615528	Hoxa2	ENSMUST00000161998.1|Greb1|ENSMUSG00000036523.10|gene regulated by estrogen in breast cancer protein
mm10_v2_chr3_-_157925056_157925077	0.606578	Hoxa2	ENSMUST00000118539.1|Cth|ENSMUSG00000028179.11|cystathionase (cystathionine gamma-lyase)
mm10_v2_chr13_+_108670576_108670581	0.595402	Hoxa2	ENSMUST00000074680.6|Rps3a3|ENSMUSG00000059751.6|ribosomal protein S3A3
mm10_v2_chr15_-_102350692_102350771	0.585685	Hoxa2	ENSMUST00000041208.7|Aaas|ENSMUSG00000036678.7|achalasia, adrenocortical insufficiency, alacrimia
mm10_v2_chr5_+_138363719_138363719	0.578792	Hoxa2	ENSMUST00000100526.2|Gm10874|ENSMUSG00000075591.2|predicted gene 10874
mm10_v2_chr7_-_127260677_127260709	0.56736	Hoxa2	ENSMUST00000035276.4|Dctpp1|ENSMUSG00000042462.4|dCTP pyrophosphatase 1
mm10_v2_chr19_+_24875679_24875689	0.560922	Hoxa2	ENSMUST00000073080.5|Gm10053|ENSMUSG00000058927.5|predicted gene 10053
mm10_v2_chr6_-_83156393_83156400	0.546844	Hoxa2	ENSMUST00000153148.1|Wdr54|ENSMUSG00000030032.6|WD repeat domain 54 	ENSMUST00000125894.1|Wdr54|ENSMUSG00000030032.6|WD repeat domain 54
mm10_v2_chrX_+_56779699_56779819	0.539175	Hoxa2	ENSMUST00000114772.2|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000114768.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000155882.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr6_+_14901344_14901364	0.535527	Hoxa2	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr17_+_46496753_46496809	0.533766	Hoxa2	ENSMUST00000046497.6|Dnph1|ENSMUSG00000040658.6|2'-deoxynucleoside 5'-phosphate N-hydrolase 1
mm10_v2_chr9_+_15520830_15520846	0.529934	Hoxa2	ENSMUST00000178999.1|Smco4|ENSMUSG00000058173.5|single-pass membrane protein with coiled-coil domains 4
mm10_v2_chr9_+_122951051_122951106	0.524993	Hoxa2	ENSMUST00000040717.5|Kif15|ENSMUSG00000036768.5|kinesin family member 15
mm10_v2_chr17_-_71002488_71002592	0.514274	Hoxa2	ENSMUST00000148960.1|Myl12a|ENSMUSG00000024048.8|myosin, light chain 12A, regulatory, non-sarcomeric
mm10_v2_chr2_-_84775420_84775444	0.49186	Hoxa2	ENSMUST00000111641.1|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr4_-_42856771_42856771	0.487328	Hoxa2	ENSMUST00000107981.1|Gm12394|ENSMUSG00000078722.2|predicted gene 12394
mm10_v2_chr5_+_37735519_37735545	0.483988	Hoxa2	ENSMUST00000073554.3|Cytl1|ENSMUSG00000062329.3|cytokine-like 1
mm10_v2_chr9_-_73968901_73968999	0.480279	Hoxa2	ENSMUST00000184666.1|Unc13c|ENSMUSG00000062151.7|unc-13 homolog C (C. elegans)
mm10_v2_chr4_+_100776664_100776692	0.47671	Hoxa2	ENSMUST00000030257.8|Cachd1|ENSMUSG00000028532.8|cache domain containing 1 	ENSMUST00000097955.2|Cachd1|ENSMUSG00000028532.8|cache domain containing 1
mm10_v2_chr4_+_116596672_116596730	0.475078	Hoxa2	ENSMUST00000051869.7|Ccdc17|ENSMUSG00000034035.12|coiled-coil domain containing 17
mm10_v2_chr3_+_85915722_85915722	0.467227	Hoxa2	ENSMUST00000054148.7|Gm9790|ENSMUSG00000044330.7|predicted gene 9790
mm10_v2_chr15_-_55548164_55548164	0.466783	Hoxa2	ENSMUST00000165356.1|Mrpl13|ENSMUSG00000022370.7|mitochondrial ribosomal protein L13
mm10_v2_chr9_-_14782964_14782964	0.46464	Hoxa2	ENSMUST00000034406.3|Ankrd49|ENSMUSG00000031931.3|ankyrin repeat domain 49
mm10_v2_chr6_-_112696604_112696686	0.463621	Hoxa2	ENSMUST00000113182.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000113180.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000068487.5|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000077088.4|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae)
mm10_v2_chr9_+_58129476_58129501	0.45719	Hoxa2	ENSMUST00000133287.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr14_-_13961202_13961278	0.455988	Hoxa2	ENSMUST00000065865.8|Thoc7|ENSMUSG00000053453.8|THO complex 7 homolog (Drosophila)
mm10_v2_chr6_+_71909046_71909076	0.455822	Hoxa2	ENSMUST00000055296.8|Polr1a|ENSMUSG00000049553.9|polymerase (RNA) I polypeptide A
mm10_v2_chr13_-_63398167_63398261	0.454183	Hoxa2	ENSMUST00000160735.1|Fancc|ENSMUSG00000021461.10|Fanconi anemia, complementation group C
mm10_v2_chr14_-_122913085_122913190	0.454144	Hoxa2	ENSMUST00000162164.1|Ggact|ENSMUSG00000041625.8|gamma-glutamylamine cyclotransferase 	ENSMUST00000110679.2|Ggact|ENSMUSG00000041625.8|gamma-glutamylamine cyclotransferase 	ENSMUST00000038075.5|Ggact|ENSMUSG00000041625.8|gamma-glutamylamine cyclotransferase
mm10_v2_chr13_+_23934434_23934462	0.45203	Hoxa2	ENSMUST00000072391.1|Hist1h2aa|ENSMUSG00000060081.1|histone cluster 1, H2aa
mm10_v2_chr17_-_45474839_45474938	0.4511	Hoxa2	ENSMUST00000024731.8|Spats1|ENSMUSG00000023935.9|spermatogenesis associated, serine-rich 1
mm10_v2_chrX_-_104671048_104671071	0.449235	Hoxa2	ENSMUST00000042070.5|Zdhhc15|ENSMUSG00000033906.5|zinc finger, DHHC domain containing 15
mm10_v2_chr7_-_79935258_79935371	0.444262	Hoxa2	ENSMUST00000048731.5|2610034B18Rik|ENSMUSG00000039043.5|RIKEN cDNA 2610034B18 gene
mm10_v2_chr7_+_143823135_143823167	0.443818	Hoxa2	ENSMUST00000128454.1|Dhcr7|ENSMUSG00000058454.8|7-dehydrocholesterol reductase 	ENSMUST00000073878.5|Dhcr7|ENSMUSG00000058454.8|7-dehydrocholesterol reductase
mm10_v2_chr7_+_45163915_45163926	0.434597	Hoxa2	ENSMUST00000085374.5|Slc17a7|ENSMUSG00000070570.4|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm10_v2_chr2_-_84775388_84775411	0.431534	Hoxa2	ENSMUST00000023994.3|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr14_+_65806066_65806232	0.429119	Hoxa2	ENSMUST00000139644.1|Pbk|ENSMUSG00000022033.3|PDZ binding kinase
mm10_v2_chrX_-_134161928_134161928	0.427053	Hoxa2	ENSMUST00000033611.4|Xkrx|ENSMUSG00000031258.4|X Kell blood group precursor related X linked
mm10_v2_chr8_+_48110156_48110211	0.42558	Hoxa2	ENSMUST00000174379.1|Dctd|ENSMUSG00000031562.9|dCMP deaminase
mm10_v2_chr10_-_81349085_81349240	0.42125	Hoxa2	ENSMUST00000141171.1|Hmg20b|ENSMUSG00000020232.11|high mobility group 20B
mm10_v2_chr11_-_98625661_98625661	0.418544	Hoxa2	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr3_-_92429403_92429426	0.415519	Hoxa2	ENSMUST00000047300.7|Gm9774|ENSMUSG00000042165.7|predicted pseudogene 9774
mm10_v2_chr10_-_95673451_95673451	0.413675	Hoxa2	ENSMUST00000099328.1|Anapc15-ps|ENSMUSG00000074780.1|anaphase prompoting complex C subunit 15, pseudogene
mm10_v2_chr3_-_39359128_39359160	0.409967	Hoxa2	ENSMUST00000056409.2|Gm9845|ENSMUSG00000050533.2|predicted pseudogene 9845
mm10_v2_chr6_+_14901440_14901497	0.409373	Hoxa2	ENSMUST00000128567.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr18_-_24020307_24020370	0.393431	Hoxa2	ENSMUST00000153337.1|Zfp191|ENSMUSG00000051469.8|zinc finger protein 191 	ENSMUST00000148525.1|Zfp191|ENSMUSG00000051469.8|zinc finger protein 191
mm10_v2_chr16_+_44347121_44347121	0.38522	Hoxa2	ENSMUST00000050897.6|Spice1|ENSMUSG00000043065.6|spindle and centriole associated protein 1
mm10_v2_chr9_+_75441518_75441575	0.382732	Hoxa2	ENSMUST00000048937.4|Leo1|ENSMUSG00000042487.5|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr5_-_114128171_114128219	0.381122	Hoxa2	ENSMUST00000053657.6|Alkbh2|ENSMUSG00000044339.6|alkB, alkylation repair homolog 2 (E. coli) 	ENSMUST00000112279.1|Alkbh2|ENSMUSG00000044339.6|alkB, alkylation repair homolog 2 (E. coli)
mm10_v2_chr1_-_155527083_155527111	0.377312	Hoxa2	ENSMUST00000097531.2|Gm5532|ENSMUSG00000073535.4|predicted gene 5532
mm10_v2_chr2_-_73453918_73453979	0.374975	Hoxa2	ENSMUST00000102679.1|Wipf1|ENSMUSG00000075284.4|WAS/WASL interacting protein family, member 1
mm10_v2_chr11_-_120990871_120991037	0.373365	Hoxa2	ENSMUST00000154483.1|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr1_-_170215380_170215420	0.372287	Hoxa2	ENSMUST00000027979.7|Uhmk1|ENSMUSG00000026667.8|U2AF homology motif (UHM) kinase 1 	ENSMUST00000123399.1|Uhmk1|ENSMUSG00000026667.8|U2AF homology motif (UHM) kinase 1
mm10_v2_chr15_-_100425050_100425075	0.364091	Hoxa2	ENSMUST00000123461.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr7_+_73391160_73391296	0.361048	Hoxa2	ENSMUST00000128471.1|Rgma|ENSMUSG00000070509.9|RGM domain family, member A
mm10_v2_chr8_+_83389846_83389872	0.360051	Hoxa2	ENSMUST00000002259.6|Clgn|ENSMUSG00000002190.7|calmegin
mm10_v2_chr3_-_107943705_107943749	0.354015	Hoxa2	ENSMUST00000106680.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6 	ENSMUST00000106684.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6 	ENSMUST00000106685.2|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6
mm10_v2_chr3_+_134828993_134829015	0.352854	Hoxa2	ENSMUST00000029822.4|Tacr3|ENSMUSG00000028172.4|tachykinin receptor 3
mm10_v2_chr5_-_130003000_130003049	0.347553	Hoxa2	ENSMUST00000026613.7|Gusb|ENSMUSG00000025534.11|glucuronidase, beta
mm10_v2_chr17_+_24426676_24426701	0.347022	Hoxa2	ENSMUST00000024946.5|Eci1|ENSMUSG00000024132.5|enoyl-Coenzyme A delta isomerase 1
mm10_v2_chr7_+_140125651_140125727	0.346166	Hoxa2	ENSMUST00000026537.5|Paox|ENSMUSG00000025464.8|polyamine oxidase (exo-N4-amino) 	ENSMUST00000097967.3|Paox|ENSMUSG00000025464.8|polyamine oxidase (exo-N4-amino)
mm10_v2_chr3_-_150073620_150073620	0.339108	Hoxa2	ENSMUST00000057740.5|Rpsa-ps10|ENSMUSG00000047676.5|ribosomal protein SA, pseudogene 10
mm10_v2_chr11_-_103938211_103938217	0.339093	Hoxa2	ENSMUST00000133774.2|Nsf|ENSMUSG00000034187.12|N-ethylmaleimide sensitive fusion protein 	ENSMUST00000149642.1|Nsf|ENSMUSG00000034187.12|N-ethylmaleimide sensitive fusion protein
mm10_v2_chr10_+_102158858_102158889	0.335706	Hoxa2	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr19_-_56548013_56548046	0.33114	Hoxa2	ENSMUST00000182059.1|Dclre1a|ENSMUSG00000025077.7|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)
mm10_v2_chr3_-_107943362_107943379	0.330465	Hoxa2	ENSMUST00000106683.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6
mm10_v2_chr7_+_119690026_119690026	0.329992	Hoxa2	ENSMUST00000047045.8|Acsm4|ENSMUSG00000047026.8|acyl-CoA synthetase medium-chain family member 4
mm10_v2_chr17_-_6655939_6655939	0.328611	Hoxa2	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr11_-_121204626_121204717	0.327894	Hoxa2	ENSMUST00000026169.6|Ogfod3|ENSMUSG00000025169.6|2-oxoglutarate and iron-dependent oxygenase domain containing 3
mm10_v2_chr11_+_75486813_75486866	0.325038	Hoxa2	ENSMUST00000018449.4|Prpf8|ENSMUSG00000020850.8|pre-mRNA processing factor 8 	ENSMUST00000102510.1|Prpf8|ENSMUSG00000020850.8|pre-mRNA processing factor 8 	ENSMUST00000131283.1|Prpf8|ENSMUSG00000020850.8|pre-mRNA processing factor 8
mm10_v2_chr1_+_187215501_187215547	0.323518	Hoxa2	ENSMUST00000097443.3|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000065573.7|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000110943.2|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2 	ENSMUST00000044812.5|Gpatch2|ENSMUSG00000039210.10|G patch domain containing 2
mm10_v2_chr18_+_34777008_34777075	0.319106	Hoxa2	ENSMUST00000043775.7|Kdm3b|ENSMUSG00000038773.10|KDM3B lysine (K)-specific demethylase 3B
mm10_v2_chr12_+_44328882_44328954	0.317597	Hoxa2	ENSMUST00000020939.8|Nrcam|ENSMUSG00000020598.9|neuron-glia-CAM-related cell adhesion molecule 	ENSMUST00000110748.2|Nrcam|ENSMUSG00000020598.9|neuron-glia-CAM-related cell adhesion molecule
mm10_v2_chr9_-_22117123_22117174	0.315793	Hoxa2	ENSMUST00000013966.6|Elof1|ENSMUSG00000013822.6|elongation factor 1 homolog (ELF1, S. cerevisiae)
mm10_v2_chr11_+_119913423_119913441	0.309569	Hoxa2	ENSMUST00000132197.1|Chmp6|ENSMUSG00000025371.6|charged multivesicular body protein 6
mm10_v2_chr16_+_10411928_10411965	0.30939	Hoxa2	ENSMUST00000023146.4|Nubp1|ENSMUSG00000022503.4|nucleotide binding protein 1
mm10_v2_chr9_-_44344159_44344228	0.308705	Hoxa2	ENSMUST00000077353.7|Hmbs|ENSMUSG00000032126.9|hydroxymethylbilane synthase
mm10_v2_chr11_-_31671727_31671856	0.308441	Hoxa2	ENSMUST00000109415.1|Bod1|ENSMUSG00000044502.10|biorientation of chromosomes in cell division 1
mm10_v2_chr3_+_66985647_66985678	0.30619	Hoxa2	ENSMUST00000162362.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1 	ENSMUST00000065074.7|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr2_-_25224653_25224702	0.302757	Hoxa2	ENSMUST00000043584.4|Tubb4b|ENSMUSG00000036752.4|tubulin, beta 4B class IVB
mm10_v2_chr9_+_122923050_122923099	0.301912	Hoxa2	ENSMUST00000051667.7|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105 	ENSMUST00000148851.1|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105
mm10_v2_chr19_-_6969746_6969808	0.298184	Hoxa2	ENSMUST00000025912.8|Plcb3|ENSMUSG00000024960.8|phospholipase C, beta 3
mm10_v2_chr4_+_95557494_95557544	0.297037	Hoxa2	ENSMUST00000079223.4|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing 	ENSMUST00000177394.1|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing
mm10_v2_chrM_+_11734_11757	0.29538	Hoxa2	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr18_-_6136057_6136098	0.294939	Hoxa2	ENSMUST00000182559.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12
mm10_v2_chr3_-_107943390_107943421	0.293993	Hoxa2	ENSMUST00000106681.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6
mm10_v2_chr19_-_41743665_41743706	0.293901	Hoxa2	ENSMUST00000025993.3|Slit1|ENSMUSG00000025020.5|slit homolog 1 (Drosophila)
mm10_v2_chr7_+_70388305_70388305	0.287341	Hoxa2	ENSMUST00000080024.5|B130024G19Rik|ENSMUSG00000062383.5|RIKEN cDNA B130024G19 gene
mm10_v2_chr7_-_116084635_116084635	0.287076	Hoxa2	ENSMUST00000111755.3|Gm4353|ENSMUSG00000091900.2|predicted gene 4353
mm10_v2_chr10_-_88605017_88605152	0.286794	Hoxa2	ENSMUST00000119185.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type 	ENSMUST00000121629.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type
mm10_v2_chr17_-_6317474_6317517	0.286552	Hoxa2	ENSMUST00000169415.1|Dynlt1a|ENSMUSG00000092074.1|dynein light chain Tctex-type 1A
mm10_v2_chr14_+_48446128_48446276	0.286368	Hoxa2	ENSMUST00000124720.1|Tmem260|ENSMUSG00000036339.11|transmembrane protein 260
mm10_v2_chr18_+_76930017_76930101	0.285761	Hoxa2	ENSMUST00000026487.4|Ier3ip1|ENSMUSG00000090000.1|immediate early response 3 interacting protein 1
mm10_v2_chr8_+_83389878_83389889	0.279381	Hoxa2	ENSMUST00000109831.2|Clgn|ENSMUSG00000002190.7|calmegin
mm10_v2_chr7_+_27473761_27473773	0.27814	Hoxa2	ENSMUST00000068641.6|Sertad3|ENSMUSG00000055200.6|SERTA domain containing 3
mm10_v2_chr6_+_34709442_34709497	0.276725	Hoxa2	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr8_+_95825353_95825354	0.273459	Hoxa2	ENSMUST00000074053.4|Gm10094|ENSMUSG00000061104.4|predicted gene 10094
mm10_v2_chr11_+_21239279_21239302	0.273228	Hoxa2	ENSMUST00000006221.7|Vps54|ENSMUSG00000020128.9|vacuolar protein sorting 54 (yeast) 	ENSMUST00000109578.1|Vps54|ENSMUSG00000020128.9|vacuolar protein sorting 54 (yeast)
mm10_v2_chr14_-_54409469_54409477	0.27261	Hoxa2	ENSMUST00000000984.4|Slc7a7|ENSMUSG00000000958.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm10_v2_chr11_+_108682602_108682639	0.271413	Hoxa2	ENSMUST00000106718.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106715.1|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106724.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chr11_-_101417615_101417615	0.27138	Hoxa2	ENSMUST00000070395.8|Aarsd1|ENSMUSG00000075528.7|alanyl-tRNA synthetase domain containing 1
mm10_v2_chr1_+_86587100_86587156	0.2696	Hoxa2	ENSMUST00000027446.4|Cops7b|ENSMUSG00000026240.6|COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana)
mm10_v2_chr3_-_119783262_119783388	0.269203	Hoxa2	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr12_-_87444017_87444017	0.269051	Hoxa2	ENSMUST00000091090.4|2700073G19Rik|ENSMUSG00000021041.7|RIKEN cDNA 2700073G19 gene
mm10_v2_chr13_-_97099296_97099296	0.268492	Hoxa2	ENSMUST00000071118.4|Gm6169|ENSMUSG00000057762.4|predicted gene 6169
mm10_v2_chr13_-_97760588_97760633	0.26775	Hoxa2	ENSMUST00000074072.3|Gm10260|ENSMUSG00000069117.3|predicted gene 10260
mm10_v2_chr19_+_56548254_56548283	0.26569	Hoxa2	ENSMUST00000071423.5|Nhlrc2|ENSMUSG00000025078.8|NHL repeat containing 2
mm10_v2_chr2_+_31572701_31572725	0.26426	Hoxa2	ENSMUST00000055244.6|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr2_+_31572775_31572841	0.262202	Hoxa2	ENSMUST00000137889.1|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr7_-_27985796_27985796	0.261255	Hoxa2	ENSMUST00000099111.3|Zfp850|ENSMUSG00000074608.3|zinc finger protein 850
mm10_v2_chr1_-_45503282_45503282	0.261103	Hoxa2	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr2_-_126709567_126709567	0.260218	Hoxa2	ENSMUST00000099423.2|Gm10774|ENSMUSG00000074846.2|predicted pseudogene 10774
mm10_v2_chr10_+_5593718_5593739	0.260079	Hoxa2	ENSMUST00000051809.8|Myct1|ENSMUSG00000046916.8|myc target 1
mm10_v2_chr14_+_73142490_73142564	0.255437	Hoxa2	ENSMUST00000170370.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000164822.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000165429.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr17_-_25880236_25880305	0.252801	Hoxa2	ENSMUST00000176696.1|Wfikkn1|ENSMUSG00000071192.5|WAP, FS, Ig, KU, and NTR-containing protein 1 	ENSMUST00000095487.5|Wfikkn1|ENSMUSG00000071192.5|WAP, FS, Ig, KU, and NTR-containing protein 1
mm10_v2_chr8_+_48109949_48110013	0.252458	Hoxa2	ENSMUST00000170263.2|Dctd|ENSMUSG00000031562.9|dCMP deaminase 	ENSMUST00000033966.6|Dctd|ENSMUSG00000031562.9|dCMP deaminase
mm10_v2_chr4_-_147936713_147936767	0.252262	Hoxa2	ENSMUST00000105712.1|Plod1|ENSMUSG00000019055.9|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 	ENSMUST00000019199.7|Plod1|ENSMUSG00000019055.9|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
mm10_v2_chr14_+_53665912_53665946	0.249711	Hoxa2	ENSMUST00000181768.1|Trav3-3|ENSMUSG00000094828.4|T cell receptor alpha variable 3-3
mm10_v2_chr9_+_75037744_75037755	0.248075	Hoxa2	ENSMUST00000168301.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr3_+_66985700_66985740	0.247504	Hoxa2	ENSMUST00000046542.6|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1 	ENSMUST00000162693.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr16_+_92498122_92498175	0.243486	Hoxa2	ENSMUST00000023670.3|Clic6|ENSMUSG00000022949.3|chloride intracellular channel 6
mm10_v2_chr3_+_89215192_89215243	0.240894	Hoxa2	ENSMUST00000142051.1|Thbs3|ENSMUSG00000028047.5|thrombospondin 3 	ENSMUST00000119084.1|Thbs3|ENSMUSG00000028047.5|thrombospondin 3
mm10_v2_chr4_-_94603239_94603253	0.2388	Hoxa2	ENSMUST00000107107.2|Plaa|ENSMUSG00000028577.7|phospholipase A2, activating protein
mm10_v2_chr11_-_78984831_78984924	0.237713	Hoxa2	ENSMUST00000073001.4|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9 	ENSMUST00000108269.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr6_+_108828633_108828721	0.234331	Hoxa2	ENSMUST00000089162.3|Edem1|ENSMUSG00000030104.7|ER degradation enhancer, mannosidase alpha-like 1
mm10_v2_chr16_+_35983424_35983582	0.233677	Hoxa2	ENSMUST00000173555.1|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr3_-_153912966_153912990	0.232911	Hoxa2	ENSMUST00000089950.4|Rabggtb|ENSMUSG00000038975.8|RAB geranylgeranyl transferase, b subunit
mm10_v2_chr1_+_85650044_85650052	0.231597	Hoxa2	ENSMUST00000066427.4|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100
mm10_v2_chr7_+_104218787_104218826	0.230672	Hoxa2	ENSMUST00000098180.3|Trim6|ENSMUSG00000072244.3|tripartite motif-containing 6
mm10_v2_chr4_-_3973581_3973607	0.229677	Hoxa2	ENSMUST00000089430.4|Gm11808|ENSMUSG00000068240.4|predicted gene 11808
mm10_v2_chr6_+_34709610_34709635	0.227061	Hoxa2	ENSMUST00000031775.6|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr2_+_174285256_174285284	0.225982	Hoxa2	ENSMUST00000130940.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr3_-_10351313_10351342	0.225356	Hoxa2	ENSMUST00000108377.1|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1 	ENSMUST00000037839.5|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1
mm10_v2_chrX_-_73921828_73921916	0.223899	Hoxa2	ENSMUST00000096316.3|Naa10|ENSMUSG00000031388.8|N(alpha)-acetyltransferase 10, NatA catalytic subunit 	ENSMUST00000114390.1|Naa10|ENSMUSG00000031388.8|N(alpha)-acetyltransferase 10, NatA catalytic subunit 	ENSMUST00000114391.3|Naa10|ENSMUSG00000031388.8|N(alpha)-acetyltransferase 10, NatA catalytic subunit 	ENSMUST00000114387.1|Naa10|ENSMUSG00000031388.8|N(alpha)-acetyltransferase 10, NatA catalytic subunit
mm10_v2_chrX_+_73214333_73214432	0.223094	Hoxa2	ENSMUST00000156188.1|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000069077.3|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000069103.4|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000114506.1|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000081827.3|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B
mm10_v2_chr15_-_35938186_35938246	0.222303	Hoxa2	ENSMUST00000014457.8|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr7_+_116093296_116093329	0.222131	Hoxa2	ENSMUST00000032899.5|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr9_+_73044833_73044864	0.220637	Hoxa2	ENSMUST00000184146.1|Rab27a|ENSMUSG00000032202.5|RAB27A, member RAS oncogene family 	ENSMUST00000034722.4|Rab27a|ENSMUSG00000032202.5|RAB27A, member RAS oncogene family
mm10_v2_chr9_-_31131817_31131853	0.219901	Hoxa2	ENSMUST00000034478.2|St14|ENSMUSG00000031995.2|suppression of tumorigenicity 14 (colon carcinoma)
mm10_v2_chr18_-_56562261_56562328	0.218935	Hoxa2	ENSMUST00000066208.6|Aldh7a1|ENSMUSG00000053644.7|aldehyde dehydrogenase family 7, member A1 	ENSMUST00000172734.1|Aldh7a1|ENSMUSG00000053644.7|aldehyde dehydrogenase family 7, member A1
mm10_v2_chr13_-_24937585_24937691	0.217566	Hoxa2	ENSMUST00000037615.6|Aldh5a1|ENSMUSG00000035936.6|aldhehyde dehydrogenase family 5, subfamily A1
mm10_v2_chr19_+_32389202_32389257	0.217158	Hoxa2	ENSMUST00000181612.1|2700046G09Rik|ENSMUSG00000097787.1|RIKEN cDNA 2700046G09 gene
mm10_v2_chr12_-_104013640_104013658	0.216366	Hoxa2	ENSMUST00000058464.4|Serpina9|ENSMUSG00000058260.2|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
mm10_v2_chr9_+_75037809_75037820	0.21384	Hoxa2	ENSMUST00000167885.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr12_+_108334341_108334406	0.213097	Hoxa2	ENSMUST00000021684.4|Cyp46a1|ENSMUSG00000021259.4|cytochrome P450, family 46, subfamily a, polypeptide 1
mm10_v2_chr9_-_72111172_72111225	0.212101	Hoxa2	ENSMUST00000183992.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr8_-_84840627_84840681	0.20958	Hoxa2	ENSMUST00000003911.6|Rad23a|ENSMUSG00000003813.9|RAD23a homolog (S. cerevisiae) 	ENSMUST00000109761.2|Rad23a|ENSMUSG00000003813.9|RAD23a homolog (S. cerevisiae) 	ENSMUST00000128035.1|Rad23a|ENSMUSG00000003813.9|RAD23a homolog (S. cerevisiae)
mm10_v2_chr2_-_165388245_165388315	0.209349	Hoxa2	ENSMUST00000103084.3|Zfp334|ENSMUSG00000017667.9|zinc finger protein 334
mm10_v2_chr8_+_123411424_123411562	0.206726	Hoxa2	ENSMUST00000071134.3|Tubb3|ENSMUSG00000062380.3|tubulin, beta 3 class III
mm10_v2_chr4_+_42714926_42714926	0.205584	Hoxa2	ENSMUST00000178454.1|Gm21955|ENSMUSG00000095375.1|predicted gene, 21955
mm10_v2_chr4_-_83285141_83285169	0.205308	Hoxa2	ENSMUST00000150522.1|Ttc39b|ENSMUSG00000038172.8|tetratricopeptide repeat domain 39B
mm10_v2_chr7_-_133122615_133122762	0.204868	Hoxa2	ENSMUST00000167218.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr7_-_28050028_28050101	0.204647	Hoxa2	ENSMUST00000032824.9|Psmc4|ENSMUSG00000030603.9|proteasome (prosome, macropain) 26S subunit, ATPase, 4
mm10_v2_chr5_+_31613939_31613944	0.204319	Hoxa2	ENSMUST00000031024.7|Mrpl33|ENSMUSG00000029142.8|mitochondrial ribosomal protein L33
mm10_v2_chr16_-_45693658_45693743	0.200031	Hoxa2	ENSMUST00000114562.2|Tmprss7|ENSMUSG00000033177.7|transmembrane serine protease 7 	ENSMUST00000036617.7|Tmprss7|ENSMUSG00000033177.7|transmembrane serine protease 7
mm10_v2_chr9_-_103202113_103202137	0.199536	Hoxa2	ENSMUST00000035157.8|Srprb|ENSMUSG00000032553.8|signal recognition particle receptor, B subunit
mm10_v2_chr15_+_31224371_31224400	0.194497	Hoxa2	ENSMUST00000044524.9|Dap|ENSMUSG00000039168.9|death-associated protein
mm10_v2_chr17_+_80290206_80290279	0.194368	Hoxa2	ENSMUST00000061703.9|Morn2|ENSMUSG00000045257.9|MORN repeat containing 2
mm10_v2_chr2_-_60963192_60963251	0.193282	Hoxa2	ENSMUST00000028347.6|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1
mm10_v2_chr12_+_87443896_87443946	0.192491	Hoxa2	ENSMUST00000161023.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160488.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000077462.7|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160880.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein
mm10_v2_chr5_+_76140700_76140730	0.189437	Hoxa2	ENSMUST00000152642.1|Srd5a3|ENSMUSG00000029233.9|steroid 5 alpha-reductase 3 	ENSMUST00000127278.1|Srd5a3|ENSMUSG00000029233.9|steroid 5 alpha-reductase 3
mm10_v2_chr2_+_55411790_55411819	0.189345	Hoxa2	ENSMUST00000155997.1|Gm14033|ENSMUSG00000087040.1|predicted gene 14033 	ENSMUST00000128307.1|Gm14033|ENSMUSG00000087040.1|predicted gene 14033
mm10_v2_chr11_-_120991039_120991092	0.188885	Hoxa2	ENSMUST00000070575.7|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr2_-_160619971_160619971	0.187014	Hoxa2	ENSMUST00000109473.1|Gm14221|ENSMUSG00000078956.2|predicted gene 14221
mm10_v2_chr11_-_78984946_78984957	0.186745	Hoxa2	ENSMUST00000108268.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr19_+_41582370_41582370	0.186669	Hoxa2	ENSMUST00000172371.1|Gm340|ENSMUSG00000090673.1|predicted gene 340
mm10_v2_chrX_+_37126777_37126795	0.186332	Hoxa2	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr3_-_65392579_65392623	0.185291	Hoxa2	ENSMUST00000029414.5|Ssr3|ENSMUSG00000027828.6|signal sequence receptor, gamma
mm10_v2_chr14_+_48446340_48446429	0.185187	Hoxa2	ENSMUST00000111735.2|Tmem260|ENSMUSG00000036339.11|transmembrane protein 260
mm10_v2_chr6_+_11925869_11925941	0.183293	Hoxa2	ENSMUST00000115510.1|Phf14|ENSMUSG00000029629.10|PHD finger protein 14 	ENSMUST00000115511.2|Phf14|ENSMUSG00000029629.10|PHD finger protein 14 	ENSMUST00000090632.4|Phf14|ENSMUSG00000029629.10|PHD finger protein 14
mm10_v2_chr18_+_56562443_56562593	0.180117	Hoxa2	ENSMUST00000130163.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export 	ENSMUST00000132628.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export
mm10_v2_chr10_-_58675631_58675654	0.179675	Hoxa2	ENSMUST00000003312.4|Edar|ENSMUSG00000003227.4|ectodysplasin-A receptor
mm10_v2_chr3_+_89215170_89215181	0.179309	Hoxa2	ENSMUST00000029682.4|Thbs3|ENSMUSG00000028047.5|thrombospondin 3
mm10_v2_chr17_+_6430112_6430204	0.178849	Hoxa2	ENSMUST00000179569.1|Dynlt1b|ENSMUSG00000096255.1|dynein light chain Tctex-type 1B
mm10_v2_chr2_-_121271403_121271410	0.177783	Hoxa2	ENSMUST00000110648.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr13_-_107414742_107414767	0.177778	Hoxa2	ENSMUST00000061241.6|Apoo-ps|ENSMUSG00000049233.6|apolipoprotein O, pseudogene
mm10_v2_chr3_-_65392546_65392562	0.177238	Hoxa2	ENSMUST00000119896.1|Ssr3|ENSMUSG00000027828.6|signal sequence receptor, gamma
mm10_v2_chr5_+_145140362_145140415	0.175214	Hoxa2	ENSMUST00000162594.1|Bud31|ENSMUSG00000038722.11|BUD31 homolog (yeast) 	ENSMUST00000162308.1|Bud31|ENSMUSG00000038722.11|BUD31 homolog (yeast) 	ENSMUST00000159018.1|Bud31|ENSMUSG00000038722.11|BUD31 homolog (yeast) 	ENSMUST00000160075.1|Bud31|ENSMUSG00000038722.11|BUD31 homolog (yeast)
mm10_v2_chr9_+_46998931_46998931	0.174234	Hoxa2	ENSMUST00000178065.1|Gm4791|ENSMUSG00000094893.1|predicted gene 4791
mm10_v2_chr10_+_57486354_57486414	0.172978	Hoxa2	ENSMUST00000079833.4|Hsf2|ENSMUSG00000019878.7|heat shock factor 2
mm10_v2_chr8_-_121829480_121829571	0.172348	Hoxa2	ENSMUST00000174717.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000174192.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000045884.10|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4
mm10_v2_chr13_-_4609122_4609189	0.172208	Hoxa2	ENSMUST00000110691.3|Akr1e1|ENSMUSG00000045410.11|aldo-keto reductase family 1, member E1 	ENSMUST00000091848.5|Akr1e1|ENSMUSG00000045410.11|aldo-keto reductase family 1, member E1
mm10_v2_chr7_-_128596278_128596278	0.16915	Hoxa2	ENSMUST00000179317.1|Gm7258|ENSMUSG00000096557.1|predicted gene 7258
mm10_v2_chr9_+_115909455_115909455	0.168862	Hoxa2	ENSMUST00000119291.1|Gadl1|ENSMUSG00000056880.6|glutamate decarboxylase-like 1 	ENSMUST00000069651.6|Gadl1|ENSMUSG00000056880.6|glutamate decarboxylase-like 1
mm10_v2_chr4_-_110290884_110290913	0.166006	Hoxa2	ENSMUST00000142722.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr18_-_56562215_56562254	0.162883	Hoxa2	ENSMUST00000170309.1|Aldh7a1|ENSMUSG00000053644.7|aldehyde dehydrogenase family 7, member A1
mm10_v2_chr13_-_46727932_46728005	0.162758	Hoxa2	ENSMUST00000021803.9|Nup153|ENSMUSG00000021374.9|nucleoporin 153
mm10_v2_chr9_+_35559460_35559493	0.16235	Hoxa2	ENSMUST00000034615.3|Pus3|ENSMUSG00000032103.4|pseudouridine synthase 3 	ENSMUST00000121246.1|Pus3|ENSMUSG00000032103.4|pseudouridine synthase 3
mm10_v2_chr18_-_20682963_20683006	0.162175	Hoxa2	ENSMUST00000165229.2|Gm10269|ENSMUSG00000091449.2|predicted gene 10269
mm10_v2_chr4_+_156235999_156236051	0.161288	Hoxa2	ENSMUST00000179543.1|Noc2l|ENSMUSG00000095567.1|nucleolar complex associated 2 homolog (S. cerevisiae) 	ENSMUST00000179886.1|Noc2l|ENSMUSG00000095567.1|nucleolar complex associated 2 homolog (S. cerevisiae)
mm10_v2_chr1_-_9700209_9700329	0.159975	Hoxa2	ENSMUST00000088658.4|Mybl1|ENSMUSG00000025912.10|myeloblastosis oncogene-like 1
mm10_v2_chr7_+_116093336_116093372	0.158751	Hoxa2	ENSMUST00000106608.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene 	ENSMUST00000106607.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr11_+_72607221_72607307	0.158443	Hoxa2	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr9_+_75037614_75037701	0.15443	Hoxa2	ENSMUST00000168166.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000169492.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000170308.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr11_+_6560183_6560240	0.153222	Hoxa2	ENSMUST00000109722.2|Ccm2|ENSMUSG00000000378.9|cerebral cavernous malformation 2
mm10_v2_chr5_+_115011111_115011208	0.152863	Hoxa2	ENSMUST00000031530.5|Sppl3|ENSMUSG00000029550.8|signal peptide peptidase 3
mm10_v2_chr3_-_58525867_58525873	0.152059	Hoxa2	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chrX_-_17571563_17571641	0.151724	Hoxa2	ENSMUST00000177213.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr12_+_17348422_17348526	0.151223	Hoxa2	ENSMUST00000046011.10|Nol10|ENSMUSG00000061458.8|nucleolar protein 10
mm10_v2_chr10_-_30600662_30600749	0.150744	Hoxa2	ENSMUST00000019927.6|Trmt11|ENSMUSG00000019792.7|tRNA methyltransferase 11
mm10_v2_chr2_-_121271315_121271322	0.148724	Hoxa2	ENSMUST00000131245.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chrX_+_73192222_73192222	0.148572	Hoxa2	ENSMUST00000101486.4|Xlr3b|ENSMUSG00000073125.4|X-linked lymphocyte-regulated 3B
mm10_v2_chr15_-_89149557_89149650	0.148179	Hoxa2	ENSMUST00000088823.3|Mapk11|ENSMUSG00000053137.6|mitogen-activated protein kinase 11
mm10_v2_chr12_+_9029982_9030012	0.147495	Hoxa2	ENSMUST00000085741.1|Ttc32|ENSMUSG00000066637.1|tetratricopeptide repeat domain 32
mm10_v2_chr3_-_129755305_129755326	0.146718	Hoxa2	ENSMUST00000029653.2|Egf|ENSMUSG00000028017.3|epidermal growth factor
mm10_v2_chr16_+_35983307_35983395	0.146405	Hoxa2	ENSMUST00000004054.6|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr1_+_134560157_134560180	0.145847	Hoxa2	ENSMUST00000047714.7|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr8_+_95715901_95715932	0.145097	Hoxa2	ENSMUST00000034096.4|Setd6|ENSMUSG00000031671.4|SET domain containing 6
mm10_v2_chr17_+_87078255_87078267	0.143893	Hoxa2	ENSMUST00000090731.5|Gm5499|ENSMUSG00000071035.4|predicted pseudogene 5499
mm10_v2_chr2_+_5951440_5951469	0.141049	Hoxa2	ENSMUST00000060092.6|Upf2|ENSMUSG00000043241.8|UPF2 regulator of nonsense transcripts homolog (yeast)
mm10_v2_chr16_+_90220742_90220771	0.131289	Hoxa2	ENSMUST00000023707.9|Sod1|ENSMUSG00000022982.9|superoxide dismutase 1, soluble
mm10_v2_chr9_+_75037838_75037917	0.131011	Hoxa2	ENSMUST00000169188.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr6_+_143285988_143286050	0.127607	Hoxa2	ENSMUST00000160951.1|D6Ertd474e|ENSMUSG00000072679.4|DNA segment, Chr 6, ERATO Doi 474, expressed
mm10_v2_chr6_-_99044414_99044459	0.127476	Hoxa2	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr13_+_23575753_23575773	0.124616	Hoxa2	ENSMUST00000105105.1|Hist1h3d|ENSMUSG00000062808.4|histone cluster 1, H3d
mm10_v2_chr3_+_53488677_53488727	0.124403	Hoxa2	ENSMUST00000029307.3|Stoml3|ENSMUSG00000027744.3|stomatin (Epb7.2)-like 3
mm10_v2_chr1_+_53313636_53313682	0.123663	Hoxa2	ENSMUST00000114484.1|Osgepl1|ENSMUSG00000026096.8|O-sialoglycoprotein endopeptidase-like 1
mm10_v2_chr12_+_76324860_76324898	0.123113	Hoxa2	ENSMUST00000095610.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5 	ENSMUST00000154078.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr19_-_56548122_56548222	0.122833	Hoxa2	ENSMUST00000026063.5|Dclre1a|ENSMUSG00000025077.7|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae) 	ENSMUST00000182276.1|Dclre1a|ENSMUSG00000025077.7|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)
mm10_v2_chr4_+_98395768_98395796	0.122158	Hoxa2	ENSMUST00000041284.3|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr3_+_103279293_103279293	0.122071	Hoxa2	ENSMUST00000029444.6|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33 	ENSMUST00000106860.1|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33
mm10_v2_chr2_-_121271341_121271397	0.122044	Hoxa2	ENSMUST00000110647.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr6_-_24527546_24527585	0.121634	Hoxa2	ENSMUST00000118558.1|Ndufa5|ENSMUSG00000023089.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm10_v2_chr6_+_113604749_113604772	0.120846	Hoxa2	ENSMUST00000035725.5|Brk1|ENSMUSG00000033940.7|BRICK1, SCAR/WAVE actin-nucleating complex subunit
mm10_v2_chr14_+_3846245_3846245	0.118443	Hoxa2	ENSMUST00000180934.1|Gm3033|ENSMUSG00000093887.2|predicted gene 3033
mm10_v2_chr15_-_81045467_81045546	0.117163	Hoxa2	ENSMUST00000135047.1|Mkl1|ENSMUSG00000042292.10|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm10_v2_chr17_+_34135182_34135182	0.11463	Hoxa2	ENSMUST00000042121.9|H2-DMa|ENSMUSG00000037649.9|histocompatibility 2, class II, locus DMa
mm10_v2_chr9_+_110656494_110656544	0.114172	Hoxa2	ENSMUST00000019803.4|Ccdc12|ENSMUSG00000019659.4|coiled-coil domain containing 12
mm10_v2_chr1_-_10038106_10038169	0.113273	Hoxa2	ENSMUST00000027050.3|Cops5|ENSMUSG00000025917.3|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)
mm10_v2_chr4_-_43653542_43653557	0.112455	Hoxa2	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr14_+_58070547_58070547	0.107948	Hoxa2	ENSMUST00000165526.1|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr3_+_58526303_58526303	0.106645	Hoxa2	ENSMUST00000138848.1|Eif2a|ENSMUSG00000027810.8|eukaryotic translation initiation factor 2A
mm10_v2_chr19_-_30549516_30549665	0.105259	Hoxa2	ENSMUST00000025803.8|Dkk1|ENSMUSG00000024868.8|dickkopf homolog 1 (Xenopus laevis)
mm10_v2_chr1_-_180813534_180813583	0.104104	Hoxa2	ENSMUST00000159789.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000081026.4|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr6_+_37870786_37870882	0.103395	Hoxa2	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr10_-_39895821_39895821	0.102281	Hoxa2	ENSMUST00000178045.1|AA474331|ENSMUSG00000096687.1|expressed sequence AA474331
mm10_v2_chr15_+_52712434_52712477	0.101299	Hoxa2	ENSMUST00000037115.7|Med30|ENSMUSG00000038622.7|mediator complex subunit 30
mm10_v2_chr1_+_53313622_53313635	0.101086	Hoxa2	ENSMUST00000027265.3|Osgepl1|ENSMUSG00000026096.8|O-sialoglycoprotein endopeptidase-like 1
mm10_v2_chr11_-_68927049_68927101	0.0986759	Hoxa2	ENSMUST00000038932.7|Odf4|ENSMUSG00000032921.7|outer dense fiber of sperm tails 4
mm10_v2_chr10_-_53694823_53694823	0.0972046	Hoxa2	ENSMUST00000171807.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr11_+_102041509_102041531	0.0971798	Hoxa2	ENSMUST00000123895.1|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000017453.5|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000107163.2|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000107164.2|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G
mm10_v2_chr5_+_119834663_119834663	0.0970827	Hoxa2	ENSMUST00000018407.6|Tbx5|ENSMUSG00000018263.8|T-box 5
mm10_v2_chr1_+_134560190_134560213	0.0968391	Hoxa2	ENSMUST00000112198.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B 	ENSMUST00000112197.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr3_+_88835231_88835231	0.0948418	Hoxa2	ENSMUST00000107498.2|Gon4l|ENSMUSG00000054199.10|gon-4-like (C.elegans)
mm10_v2_chr2_-_155826647_155826766	0.0940851	Hoxa2	ENSMUST00000109638.1|Eif6|ENSMUSG00000027613.9|eukaryotic translation initiation factor 6 	ENSMUST00000134278.1|Eif6|ENSMUSG00000027613.9|eukaryotic translation initiation factor 6
mm10_v2_chr3_+_89183131_89183207	0.0931275	Hoxa2	ENSMUST00000140473.1|Fam189b|ENSMUSG00000032657.9|family with sequence similarity 189, member B 	ENSMUST00000041913.6|Fam189b|ENSMUSG00000032657.9|family with sequence similarity 189, member B
mm10_v2_chr11_-_86671169_86671186	0.090209	Hoxa2	ENSMUST00000143991.1|Vmp1|ENSMUSG00000018171.3|vacuole membrane protein 1
mm10_v2_chr6_-_86684510_86684529	0.0894687	Hoxa2	ENSMUST00000001186.4|Snrnp27|ENSMUSG00000001158.7|small nuclear ribonucleoprotein 27 (U4/U6.U5) 	ENSMUST00000113683.1|Snrnp27|ENSMUSG00000001158.7|small nuclear ribonucleoprotein 27 (U4/U6.U5)
mm10_v2_chr17_+_6601671_6601671	0.0890189	Hoxa2	ENSMUST00000092966.4|Dynlt1c|ENSMUSG00000000579.8|dynein light chain Tctex-type 1C
mm10_v2_chr10_+_14523062_14523065	0.0884809	Hoxa2	ENSMUST00000096020.5|Gm10335|ENSMUSG00000071532.5|predicted gene 10335
mm10_v2_chrX_+_150547375_150547459	0.08731	Hoxa2	ENSMUST00000066337.6|Alas2|ENSMUSG00000025270.7|aminolevulinic acid synthase 2, erythroid 	ENSMUST00000112715.1|Alas2|ENSMUSG00000025270.7|aminolevulinic acid synthase 2, erythroid
mm10_v2_chr11_+_62551676_62551735	0.087072	Hoxa2	ENSMUST00000136938.1|Ubb|ENSMUSG00000019505.7|ubiquitin B
mm10_v2_chr9_+_108936648_108936715	0.0868959	Hoxa2	ENSMUST00000026743.8|Uqcrc1|ENSMUSG00000025651.9|ubiquinol-cytochrome c reductase core protein 1
mm10_v2_chr8_-_70897407_70897443	0.0862879	Hoxa2	ENSMUST00000054220.8|Rpl18a|ENSMUSG00000045128.8|ribosomal protein L18A
mm10_v2_chrX_+_8892376_8892423	0.0852446	Hoxa2	ENSMUST00000064196.3|B630019K06Rik|ENSMUSG00000052364.3|RIKEN cDNA B630019K06 gene
mm10_v2_chr1_-_180813591_180813632	0.0841143	Hoxa2	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr18_+_58556224_58556257	0.0824004	Hoxa2	ENSMUST00000025500.6|Slc27a6|ENSMUSG00000024600.8|solute carrier family 27 (fatty acid transporter), member 6
mm10_v2_chr7_+_29238434_29238456	0.0812773	Hoxa2	ENSMUST00000108237.1|Yif1b|ENSMUSG00000030588.5|Yip1 interacting factor homolog B (S. cerevisiae)
mm10_v2_chr14_+_3224440_3224440	0.0807869	Hoxa2	ENSMUST00000112797.4|D830030K20Rik|ENSMUSG00000096039.1|RIKEN cDNA D830030K20 gene
mm10_v2_chrM_-_14060_14074	0.0799504	Hoxa2	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr8_-_83332416_83332494	0.0799246	Hoxa2	ENSMUST00000177594.1|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2 	ENSMUST00000053902.3|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2
mm10_v2_chr4_+_145510759_145510791	0.0787565	Hoxa2	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr12_-_82496537_82496537	0.0782543	Hoxa2	ENSMUST00000179295.1|Gm5435|ENSMUSG00000094374.1|predicted gene 5435
mm10_v2_chrX_+_12587791_12587846	0.0771807	Hoxa2	ENSMUST00000033313.2|Atp6ap2|ENSMUSG00000031007.2|ATPase, H+ transporting, lysosomal accessory protein 2
mm10_v2_chr18_-_40219324_40219399	0.0756467	Hoxa2	ENSMUST00000025364.4|Yipf5|ENSMUSG00000024487.4|Yip1 domain family, member 5
mm10_v2_chr8_-_46211284_46211284	0.0752248	Hoxa2	ENSMUST00000034049.4|Slc25a4|ENSMUSG00000031633.4|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
mm10_v2_chr3_+_121531603_121531634	0.0745721	Hoxa2	ENSMUST00000180804.1|A530020G20Rik|ENSMUSG00000097124.1|RIKEN cDNA A530020G20 gene
mm10_v2_chr11_-_5898771_5898788	0.0744506	Hoxa2	ENSMUST00000102921.3|Myl7|ENSMUSG00000020469.8|myosin, light polypeptide 7, regulatory
mm10_v2_chr7_-_145283915_145283941	0.073853	Hoxa2	ENSMUST00000058022.4|Tpcn2|ENSMUSG00000048677.8|two pore segment channel 2
mm10_v2_chr17_-_53539411_53539459	0.0728235	Hoxa2	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr6_+_83156401_83156451	0.0727733	Hoxa2	ENSMUST00000032106.4|1700003E16Rik|ENSMUSG00000030030.4|RIKEN cDNA 1700003E16 gene
mm10_v2_chr1_+_85100164_85100164	0.0723653	Hoxa2	ENSMUST00000097669.1|Gm10553|ENSMUSG00000073631.1|predicted gene 10553
mm10_v2_chr7_-_78847206_78847255	0.070592	Hoxa2	ENSMUST00000032839.6|Det1|ENSMUSG00000030610.7|de-etiolated homolog 1 (Arabidopsis)
mm10_v2_chr7_-_100583072_100583124	0.0698073	Hoxa2	ENSMUST00000152876.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48 	ENSMUST00000150042.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48
mm10_v2_chr3_+_88716884_88716906	0.0694838	Hoxa2	ENSMUST00000172252.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr18_-_56562187_56562209	0.0684424	Hoxa2	ENSMUST00000171844.2|Aldh7a1|ENSMUSG00000053644.7|aldehyde dehydrogenase family 7, member A1
mm10_v2_chr16_+_38346986_38347050	0.0679101	Hoxa2	ENSMUST00000050273.8|Cox17|ENSMUSG00000046516.10|cytochrome c oxidase assembly protein 17 	ENSMUST00000120495.1|Cox17|ENSMUSG00000046516.10|cytochrome c oxidase assembly protein 17 	ENSMUST00000119704.1|Gm21987|ENSMUSG00000095464.1|predicted gene 21987
mm10_v2_chr9_+_92309362_92309386	0.0674119	Hoxa2	ENSMUST00000098477.1|1700057G04Rik|ENSMUSG00000074139.2|RIKEN cDNA 1700057G04 gene 	ENSMUST00000150594.1|1700057G04Rik|ENSMUSG00000074139.2|RIKEN cDNA 1700057G04 gene
mm10_v2_chr12_-_27160311_27160476	0.0673177	Hoxa2	ENSMUST00000182473.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000177636.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000183238.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr14_+_55015454_55015571	0.0667943	Hoxa2	ENSMUST00000022815.8|Ngdn|ENSMUSG00000022204.8|neuroguidin, EIF4E binding protein
mm10_v2_chr3_-_88461182_88461226	0.0657605	Hoxa2	ENSMUST00000166237.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr3_-_130060850_130060907	0.065757	Hoxa2	ENSMUST00000001079.8|Sec24b|ENSMUSG00000001052.9|Sec24 related gene family, member B (S. cerevisiae)
mm10_v2_chr9_+_113930934_113930987	0.0635409	Hoxa2	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr7_+_19368498_19368553	0.0632599	Hoxa2	ENSMUST00000132655.1|Ppp1r13l|ENSMUSG00000040734.8|protein phosphatase 1, regulatory (inhibitor) subunit 13 like
mm10_v2_chr7_+_17203469_17203485	0.0631355	Hoxa2	ENSMUST00000075934.5|Psg29|ENSMUSG00000023159.7|pregnancy-specific glycoprotein 29
mm10_v2_chr17_+_37193889_37193897	0.0628113	Hoxa2	ENSMUST00000038844.6|Ubd|ENSMUSG00000035186.6|ubiquitin D
mm10_v2_chr6_+_49367739_49367896	0.0622673	Hoxa2	ENSMUST00000060561.8|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A 	ENSMUST00000121903.1|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A 	ENSMUST00000134786.1|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A
mm10_v2_chr15_+_102977032_102977032	0.0617344	Hoxa2	ENSMUST00000001706.6|Hoxc9|ENSMUSG00000036139.6|homeobox C9
mm10_v2_chr1_-_120074023_120074074	0.0614489	Hoxa2	ENSMUST00000056089.7|Tmem37|ENSMUSG00000050777.7|transmembrane protein 37
mm10_v2_chr6_+_86628174_86628208	0.0608634	Hoxa2	ENSMUST00000043400.6|Asprv1|ENSMUSG00000033508.6|aspartic peptidase, retroviral-like 1
mm10_v2_chr11_-_120991305_120991339	0.0597078	Hoxa2	ENSMUST00000018274.3|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr14_-_59365410_59365461	0.0595358	Hoxa2	ENSMUST00000161031.1|Phf11d|ENSMUSG00000068245.8|PHD finger protein 11D 	ENSMUST00000160425.1|Phf11d|ENSMUSG00000068245.8|PHD finger protein 11D
mm10_v2_chrX_-_17572241_17572325	0.0585289	Hoxa2	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr5_+_86804508_86804564	0.0569422	Hoxa2	ENSMUST00000038384.7|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr4_-_141606011_141606058	0.0538712	Hoxa2	ENSMUST00000123150.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000133874.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000136831.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000130181.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000105785.2|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1
mm10_v2_chr12_-_15816762_15816881	0.0529047	Hoxa2	ENSMUST00000020922.7|Trib2|ENSMUSG00000020601.7|tribbles homolog 2 (Drosophila)
mm10_v2_chr3_+_89266552_89266590	0.0525782	Hoxa2	ENSMUST00000040824.1|Dpm3|ENSMUSG00000042737.3|dolichyl-phosphate mannosyltransferase polypeptide 3
mm10_v2_chr13_-_41847626_41847684	0.0525687	Hoxa2	ENSMUST00000121404.1|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr17_+_64600702_64600739	0.0521723	Hoxa2	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chr2_-_174346712_174346712	0.0511798	Hoxa2	ENSMUST00000168292.1|Gm20721|ENSMUSG00000090625.1|predicted gene, 20721
mm10_v2_chr3_+_88716838_88716883	0.0504589	Hoxa2	ENSMUST00000029692.8|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1 	ENSMUST00000171645.1|Rit1|ENSMUSG00000028057.8|Ras-like without CAAX 1
mm10_v2_chr15_+_59315030_59315087	0.0485753	Hoxa2	ENSMUST00000022977.7|Sqle|ENSMUSG00000022351.8|squalene epoxidase
mm10_v2_chr5_+_136953246_136953406	0.0474791	Hoxa2	ENSMUST00000111094.1|Fis1|ENSMUSG00000019054.7|fission 1 (mitochondrial outer membrane) homolog (yeast) 	ENSMUST00000111097.1|Fis1|ENSMUSG00000019054.7|fission 1 (mitochondrial outer membrane) homolog (yeast)
mm10_v2_chr13_-_54565368_54565435	0.045795	Hoxa2	ENSMUST00000026989.8|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene
mm10_v2_chr7_+_24587543_24587543	0.043685	Hoxa2	ENSMUST00000077191.6|Ethe1|ENSMUSG00000064254.6|ethylmalonic encephalopathy 1
mm10_v2_chr3_+_27317028_27317084	0.043419	Hoxa2	ENSMUST00000046383.5|Tnfsf10|ENSMUSG00000039304.5|tumor necrosis factor (ligand) superfamily, member 10 	ENSMUST00000174840.1|Tnfsf10|ENSMUSG00000039304.5|tumor necrosis factor (ligand) superfamily, member 10
mm10_v2_chr15_-_79834261_79834285	0.041015	Hoxa2	ENSMUST00000148358.1|Cbx6|ENSMUSG00000089715.5|chromobox 6
mm10_v2_chr17_+_14978864_14978864	0.0396423	Hoxa2	ENSMUST00000061688.9|9030025P20Rik|ENSMUSG00000073455.4|RIKEN cDNA 9030025P20 gene
mm10_v2_chr8_-_67818218_67818269	0.0395094	Hoxa2	ENSMUST00000059374.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr3_+_32529452_32529527	0.0372971	Hoxa2	ENSMUST00000091257.4|Mfn1|ENSMUSG00000027668.7|mitofusin 1
mm10_v2_chr5_+_30869579_30869620	0.0353242	Hoxa2	ENSMUST00000046349.7|Tmem214|ENSMUSG00000038828.7|transmembrane protein 214
mm10_v2_chr12_-_3357012_3357153	0.0344682	Hoxa2	ENSMUST00000180719.1|Gm26520|ENSMUSG00000097429.1|predicted gene, 26520
mm10_v2_chr6_+_142413441_142413441	0.0321777	Hoxa2	ENSMUST00000088263.4|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr1_-_163403627_163403679	0.0283575	Hoxa2	ENSMUST00000045138.4|Gorab|ENSMUSG00000040124.4|golgin, RAB6-interacting
mm10_v2_chr4_+_122836236_122836259	0.0279601	Hoxa2	ENSMUST00000030412.4|Ppt1|ENSMUSG00000028657.8|palmitoyl-protein thioesterase 1 	ENSMUST00000121870.1|Ppt1|ENSMUSG00000028657.8|palmitoyl-protein thioesterase 1 	ENSMUST00000097902.4|Ppt1|ENSMUSG00000028657.8|palmitoyl-protein thioesterase 1
mm10_v2_chrX_-_73265390_73265390	0.026394	Hoxa2	ENSMUST00000080839.1|Xlr3c|ENSMUSG00000058147.1|X-linked lymphocyte-regulated 3C
mm10_v2_chr14_-_7450917_7450917	0.0260207	Hoxa2	ENSMUST00000169555.1|Gm3755|ENSMUSG00000091227.1|predicted gene 3755
mm10_v2_chr3_+_95622236_95622278	0.0254355	Hoxa2	ENSMUST00000074353.4|Rps10-ps1|ENSMUSG00000060438.4|ribosomal protein S10, pseudogene 1
mm10_v2_chr12_-_87233556_87233556	0.0247524	Hoxa2	ENSMUST00000021423.7|Noxred1|ENSMUSG00000072919.3|NADP+ dependent oxidoreductase domain containing 1
mm10_v2_chrX_-_7898950_7899000	0.0246652	Hoxa2	ENSMUST00000115655.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1 	ENSMUST00000156741.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chrX_-_135210672_135210700	0.0235106	Hoxa2	ENSMUST00000033783.1|Tceal6|ENSMUSG00000031409.1|transcription elongation factor A (SII)-like 6
mm10_v2_chr2_+_153741274_153741294	0.0224916	Hoxa2	ENSMUST00000028981.8|Mapre1|ENSMUSG00000027479.8|microtubule-associated protein, RP/EB family, member 1
mm10_v2_chr4_-_108118528_108118553	0.0223199	Hoxa2	ENSMUST00000030340.8|Scp2|ENSMUSG00000028603.9|sterol carrier protein 2, liver
mm10_v2_chr5_+_29434664_29434745	0.0215821	Hoxa2	ENSMUST00000001611.9|Nom1|ENSMUSG00000001569.9|nucleolar protein with MIF4G domain 1
mm10_v2_chr3_+_76075583_76075583	0.0212159	Hoxa2	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr8_-_54529951_54530007	0.0206144	Hoxa2	ENSMUST00000067476.8|Spcs3|ENSMUSG00000054408.9|signal peptidase complex subunit 3 homolog (S. cerevisiae)
mm10_v2_chr13_+_21787461_21787508	0.019717	Hoxa2	ENSMUST00000110473.2|Hist1h2bp|ENSMUSG00000069308.7|histone cluster 1, H2bp 	ENSMUST00000102982.1|Hist1h2bp|ENSMUSG00000069308.7|histone cluster 1, H2bp
mm10_v2_chr2_+_119675062_119675095	0.0196873	Hoxa2	ENSMUST00000028767.8|Rtf1|ENSMUSG00000027304.9|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr9_+_121710389_121710422	0.018943	Hoxa2	ENSMUST00000035113.9|Deb1|ENSMUSG00000032526.10|differentially expressed in B16F10 1
mm10_v2_chrY_-_6237995_6237995	0.0172758	Hoxa2	ENSMUST00000177612.1|Gm21746|ENSMUSG00000094346.1|predicted gene, 21746
mm10_v2_chr1_-_79671966_79671993	0.0163018	Hoxa2	ENSMUST00000162342.1|Ap1s3|ENSMUSG00000054702.8|adaptor-related protein complex AP-1, sigma 3
mm10_v2_chr17_-_24073479_24073490	0.0159506	Hoxa2	ENSMUST00000017090.5|Kctd5|ENSMUSG00000016946.5|potassium channel tetramerisation domain containing 5
mm10_v2_chr1_+_164048214_164048234	0.0157807	Hoxa2	ENSMUST00000027874.5|Sele|ENSMUSG00000026582.6|selectin, endothelial cell
mm10_v2_chr6_+_124304646_124304671	0.0149636	Hoxa2	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr4_-_43653560_43653594	0.0145535	Hoxa2	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr12_-_20900867_20900867	0.0134055	Hoxa2	ENSMUST00000079237.5|Zfp125|ENSMUSG00000069755.4|zinc finger protein 125
mm10_v2_chr12_-_3426700_3426782	0.0124315	Hoxa2	ENSMUST00000180149.1|1110002L01Rik|ENSMUSG00000071456.2|RIKEN cDNA 1110002L01 gene
mm10_v2_chr7_-_126396715_126396762	0.0120956	Hoxa2	ENSMUST00000075671.4|Nfatc2ip|ENSMUSG00000030722.7|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein
mm10_v2_chr13_-_54565299_54565362	0.0110828	Hoxa2	ENSMUST00000153065.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene 	ENSMUST00000126295.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene 	ENSMUST00000143144.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene 	ENSMUST00000132136.1|4833439L19Rik|ENSMUSG00000025871.12|RIKEN cDNA 4833439L19 gene
mm10_v2_chr7_-_132786914_132786941	0.0103459	Hoxa2	ENSMUST00000065371.7|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B 	ENSMUST00000106166.1|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr5_+_122354369_122354455	0.00887836	Hoxa2	ENSMUST00000155671.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe) 	ENSMUST00000118830.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe) 	ENSMUST00000117868.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe) 	ENSMUST00000118765.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe) 	ENSMUST00000145821.1|Vps29|ENSMUSG00000029462.12|vacuolar protein sorting 29 (S. pombe)
mm10_v2_chr6_-_119388671_119388739	0.00798546	Hoxa2	ENSMUST00000169744.1|Adipor2|ENSMUSG00000030168.7|adiponectin receptor 2
mm10_v2_chr7_-_130772652_130772652	0.00789293	Hoxa2	ENSMUST00000057134.4|Etos1|ENSMUSG00000050189.4|ectopic ossification 1
mm10_v2_chr17_-_15041457_15041559	0.00727563	Hoxa2	ENSMUST00000097400.4|Gm3448|ENSMUSG00000079710.3|predicted gene 3448 	ENSMUST00000097398.4|Tcte3|ENSMUSG00000079707.3|t-complex-associated testis expressed 3 	ENSMUST00000040746.6|Tcte3|ENSMUSG00000079707.3|t-complex-associated testis expressed 3
mm10_v2_chr12_+_76324905_76324932	0.00714633	Hoxa2	ENSMUST00000172992.1|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr15_-_79505241_79505241	0.00696678	Hoxa2	ENSMUST00000057801.6|Kcnj4|ENSMUSG00000044216.6|potassium inwardly-rectifying channel, subfamily J, member 4
mm10_v2_chr4_-_41314877_41314889	0.00650257	Hoxa2	ENSMUST00000030145.8|Dcaf12|ENSMUSG00000028436.8|DDB1 and CUL4 associated factor 12
mm10_v2_chr10_+_80172934_80172961	0.00578069	Hoxa2	ENSMUST00000041882.6|1600002K03Rik|ENSMUSG00000035595.6|RIKEN cDNA 1600002K03 gene
mm10_v2_chr2_-_73625731_73625744	0.00549561	Hoxa2	ENSMUST00000070579.6|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr18_-_35722330_35722381	0.00265032	Hoxa2	ENSMUST00000133064.1|Ecscr|ENSMUSG00000073599.3|endothelial cell surface expressed chemotaxis and apoptosis regulator
mm10_v2_chr8_-_122974793_122974793	0.00191276	Hoxa2	ENSMUST00000098334.5|Ankrd11|ENSMUSG00000035569.10|ankyrin repeat domain 11
mm10_v2_chr11_-_101119814_101119849	0.000885203	Hoxa2	ENSMUST00000107295.3|Fam134c|ENSMUSG00000017802.8|family with sequence similarity 134, member C
