mm10_v2_chr3_-_86548268_86548290	2.62691	Hoxa7_Hoxc8	ENSMUST00000077524.3|Mab21l2|ENSMUSG00000057777.3|mab-21-like 2 (C. elegans)
mm10_v2_chr3_+_55782500_55782521	1.76951	Hoxa7_Hoxc8	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr8_+_45885479_45885494	1.39253	Hoxa7_Hoxc8	ENSMUST00000034053.5|Pdlim3|ENSMUSG00000031636.6|PDZ and LIM domain 3
mm10_v2_chr19_+_55895508_55895511	1.28616	Hoxa7_Hoxc8	ENSMUST00000111646.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr14_+_80000292_80000309	1.27718	Hoxa7_Hoxc8	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr1_+_72284367_72284419	1.22835	Hoxa7_Hoxc8	ENSMUST00000027380.5|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169 	ENSMUST00000141783.1|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169
mm10_v2_chr15_-_37458523_37458581	1.12252	Hoxa7_Hoxc8	ENSMUST00000116445.2|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr5_-_62766153_62766246	1.06421	Hoxa7_Hoxc8	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chrX_-_143933204_143933311	0.868129	Hoxa7_Hoxc8	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chrX_-_143933089_143933142	0.840237	Hoxa7_Hoxc8	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr15_-_8710409_8710498	0.790713	Hoxa7_Hoxc8	ENSMUST00000157065.1|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr15_-_8710734_8710764	0.780645	Hoxa7_Hoxc8	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr2_+_125136692_125136769	0.725075	Hoxa7_Hoxc8	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr18_+_23753708_23753725	0.71427	Hoxa7_Hoxc8	ENSMUST00000115830.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr3_+_55461758_55461961	0.671738	Hoxa7_Hoxc8	ENSMUST00000070418.4|Dclk1|ENSMUSG00000027797.9|doublecortin-like kinase 1
mm10_v2_chr2_+_109917639_109917656	0.666772	Hoxa7_Hoxc8	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr6_-_118479237_118479320	0.64662	Hoxa7_Hoxc8	ENSMUST00000161170.1|Zfp9|ENSMUSG00000072623.5|zinc finger protein 9
mm10_v2_chr3_+_5218516_5218544	0.637944	Hoxa7_Hoxc8	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr6_+_30541582_30541650	0.615526	Hoxa7_Hoxc8	ENSMUST00000096066.4|Cpa2|ENSMUSG00000071553.4|carboxypeptidase A2, pancreatic
mm10_v2_chr13_+_43785107_43785160	0.614178	Hoxa7_Hoxc8	ENSMUST00000015540.2|Cd83|ENSMUSG00000015396.3|CD83 antigen
mm10_v2_chr18_+_37518341_37518359	0.566877	Hoxa7_Hoxc8	ENSMUST00000097609.1|Pcdhb22|ENSMUSG00000073591.3|protocadherin beta 22
mm10_v2_chr14_-_108914237_108914257	0.491152	Hoxa7_Hoxc8	ENSMUST00000100322.2|Slitrk1|ENSMUSG00000075478.2|SLIT and NTRK-like family, member 1
mm10_v2_chr9_-_55919605_55919605	0.454679	Hoxa7_Hoxc8	ENSMUST00000037408.8|Scaper|ENSMUSG00000034007.9|S phase cyclin A-associated protein in the ER
mm10_v2_chr4_+_102589687_102589843	0.45007	Hoxa7_Hoxc8	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr3_-_66296807_66296837	0.445233	Hoxa7_Hoxc8	ENSMUST00000029419.7|Veph1|ENSMUSG00000027831.9|ventricular zone expressed PH domain-containing 1
mm10_v2_chr5_+_29195983_29196032	0.440966	Hoxa7_Hoxc8	ENSMUST00000160888.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000159272.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000001247.5|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000161398.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000160246.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32
mm10_v2_chr18_-_10706688_10706771	0.410777	Hoxa7_Hoxc8	ENSMUST00000002549.7|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117726.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117828.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3
mm10_v2_chr6_+_63255971_63256036	0.393723	Hoxa7_Hoxc8	ENSMUST00000159561.1|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2 	ENSMUST00000095852.3|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2
mm10_v2_chr6_-_137169710_137169732	0.380146	Hoxa7_Hoxc8	ENSMUST00000117919.1|Rerg|ENSMUSG00000030222.7|RAS-like, estrogen-regulated, growth-inhibitor
mm10_v2_chr3_+_5218546_5218561	0.374294	Hoxa7_Hoxc8	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr3_+_5218589_5218614	0.360898	Hoxa7_Hoxc8	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr9_-_103228420_103228442	0.359086	Hoxa7_Hoxc8	ENSMUST00000126359.1|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr14_+_64589802_64589848	0.356158	Hoxa7_Hoxc8	ENSMUST00000180610.1|A930011O12Rik|ENSMUSG00000097545.1|RIKEN cDNA A930011O12 gene
mm10_v2_chr13_+_42681513_42681564	0.354432	Hoxa7_Hoxc8	ENSMUST00000149235.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr3_-_59220150_59220259	0.350363	Hoxa7_Hoxc8	ENSMUST00000170388.1|P2ry12|ENSMUSG00000036353.7|purinergic receptor P2Y, G-protein coupled 12
mm10_v2_chr7_+_126950687_126950729	0.326435	Hoxa7_Hoxc8	ENSMUST00000106333.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr10_+_116018213_116018421	0.321754	Hoxa7_Hoxc8	ENSMUST00000063470.4|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr6_+_145934113_145934136	0.286968	Hoxa7_Hoxc8	ENSMUST00000032383.7|Sspn|ENSMUSG00000030255.7|sarcospan
mm10_v2_chr9_+_110052016_110052111	0.284639	Hoxa7_Hoxc8	ENSMUST00000164930.1|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4 	ENSMUST00000163979.1|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4
mm10_v2_chr1_-_132367879_132367894	0.276599	Hoxa7_Hoxc8	ENSMUST00000142609.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr15_-_75905349_75905388	0.273336	Hoxa7_Hoxc8	ENSMUST00000127550.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm10_v2_chr5_-_62765618_62765656	0.27045	Hoxa7_Hoxc8	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr4_-_14621805_14621819	0.267926	Hoxa7_Hoxc8	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr14_-_48662740_48662872	0.261604	Hoxa7_Hoxc8	ENSMUST00000122009.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr4_-_115133977_115134084	0.258333	Hoxa7_Hoxc8	ENSMUST00000051400.7|Cyp4x1|ENSMUSG00000047155.7|cytochrome P450, family 4, subfamily x, polypeptide 1
mm10_v2_chr3_-_50443603_50443615	0.25264	Hoxa7_Hoxc8	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr7_-_46667375_46667378	0.246852	Hoxa7_Hoxc8	ENSMUST00000107669.2|Tph1|ENSMUSG00000040046.7|tryptophan hydroxylase 1
mm10_v2_chr1_-_134955847_134955852	0.229866	Hoxa7_Hoxc8	ENSMUST00000168381.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chr1_-_127840290_127840290	0.2245	Hoxa7_Hoxc8	ENSMUST00000061512.2|Map3k19|ENSMUSG00000051590.2|mitogen-activated protein kinase kinase kinase 19
mm10_v2_chr10_+_23894688_23894688	0.220957	Hoxa7_Hoxc8	ENSMUST00000041416.7|Vnn1|ENSMUSG00000037440.7|vanin 1
mm10_v2_chr19_-_53944621_53944632	0.22001	Hoxa7_Hoxc8	ENSMUST00000135402.2|Bbip1|ENSMUSG00000084957.2|BBSome interacting protein 1
mm10_v2_chr9_+_113812547_113812621	0.214326	Hoxa7_Hoxc8	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr19_-_50678642_50678702	0.210808	Hoxa7_Hoxc8	ENSMUST00000072685.6|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1 	ENSMUST00000164039.2|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1
mm10_v2_chr2_+_69897220_69897247	0.201063	Hoxa7_Hoxc8	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr1_-_134955908_134955955	0.191731	Hoxa7_Hoxc8	ENSMUST00000045665.6|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000086444.4|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000112163.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chr5_+_66968559_66968577	0.188692	Hoxa7_Hoxc8	ENSMUST00000127184.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr17_-_45659312_45659335	0.187519	Hoxa7_Hoxc8	ENSMUST00000120717.1|Capn11|ENSMUSG00000058626.10|calpain 11
mm10_v2_chr16_-_45724600_45724619	0.180376	Hoxa7_Hoxc8	ENSMUST00000096057.4|Tagln3|ENSMUSG00000022658.10|transgelin 3
mm10_v2_chr4_+_100478806_100478872	0.179517	Hoxa7_Hoxc8	ENSMUST00000133493.2|Ube2u|ENSMUSG00000069733.5|ubiquitin-conjugating enzyme E2U (putative) 	ENSMUST00000092730.3|Ube2u|ENSMUSG00000069733.5|ubiquitin-conjugating enzyme E2U (putative) 	ENSMUST00000106979.3|Ube2u|ENSMUSG00000069733.5|ubiquitin-conjugating enzyme E2U (putative)
mm10_v2_chr4_-_14621494_14621506	0.178064	Hoxa7_Hoxc8	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr11_+_29373618_29373777	0.173356	Hoxa7_Hoxc8	ENSMUST00000040182.6|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A 	ENSMUST00000109477.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr15_-_67113909_67113992	0.169316	Hoxa7_Hoxc8	ENSMUST00000092640.5|St3gal1|ENSMUSG00000013846.9|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm10_v2_chr2_+_69897255_69897303	0.168947	Hoxa7_Hoxc8	ENSMUST00000131553.1|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr17_-_36032682_36032855	0.166191	Hoxa7_Hoxc8	ENSMUST00000102678.4|H2-T23|ENSMUSG00000067212.8|histocompatibility 2, T region locus 23
mm10_v2_chr19_-_32196393_32196428	0.165437	Hoxa7_Hoxc8	ENSMUST00000151822.1|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chr19_+_5474681_5474775	0.164443	Hoxa7_Hoxc8	ENSMUST00000165485.1|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2 	ENSMUST00000166253.1|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2 	ENSMUST00000167371.1|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2 	ENSMUST00000167855.1|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2 	ENSMUST00000070118.7|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm10_v2_chr6_+_134640940_134641097	0.142233	Hoxa7_Hoxc8	ENSMUST00000062755.8|Loh12cr1|ENSMUSG00000042992.9|loss of heterozygosity, 12, chromosomal region 1 homolog (human)
mm10_v2_chr10_-_20725023_20725078	0.141971	Hoxa7_Hoxc8	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr18_+_32067729_32067811	0.14165	Hoxa7_Hoxc8	ENSMUST00000025243.3|Iws1|ENSMUSG00000024384.3|IWS1 homolog (S. cerevisiae)
mm10_v2_chr10_+_115569986_115570035	0.13496	Hoxa7_Hoxc8	ENSMUST00000173620.1|A930009A15Rik|ENSMUSG00000092210.1|RIKEN cDNA A930009A15 gene
mm10_v2_chr14_-_36919314_36919352	0.133846	Hoxa7_Hoxc8	ENSMUST00000182797.1|Ccser2|ENSMUSG00000058690.8|coiled-coil serine rich 2
mm10_v2_chr1_+_82316452_82316630	0.123426	Hoxa7_Hoxc8	ENSMUST00000027322.7|Rhbdd1|ENSMUSG00000026142.9|rhomboid domain containing 1
mm10_v2_chr6_+_37870786_37870882	0.120987	Hoxa7_Hoxc8	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr5_+_66968416_66968447	0.114214	Hoxa7_Hoxc8	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr18_+_86711059_86711110	0.106214	Hoxa7_Hoxc8	ENSMUST00000068423.3|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr2_-_164171113_164171113	0.104944	Hoxa7_Hoxc8	ENSMUST00000045196.3|Kcns1|ENSMUSG00000040164.3|K+ voltage-gated channel, subfamily S, 1
mm10_v2_chr7_+_38183217_38183278	0.0818162	Hoxa7_Hoxc8	ENSMUST00000165308.1|1600014C10Rik|ENSMUSG00000054676.9|RIKEN cDNA 1600014C10 gene
mm10_v2_chrM_+_9870_9885	0.0799236	Hoxa7_Hoxc8	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chr11_+_102285161_102285251	0.0760668	Hoxa7_Hoxc8	ENSMUST00000156326.1|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr1_-_24612700_24612700	0.0736892	Hoxa7_Hoxc8	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
mm10_v2_chr18_-_75697639_75697697	0.0729711	Hoxa7_Hoxc8	ENSMUST00000165559.1|Ctif|ENSMUSG00000052928.8|CBP80/20-dependent translation initiation factor
mm10_v2_chr2_-_177267036_177267036	0.0661631	Hoxa7_Hoxc8	ENSMUST00000108963.1|Gm14409|ENSMUSG00000078869.2|predicted gene 14409
mm10_v2_chr18_-_3281036_3281132	0.0643217	Hoxa7_Hoxc8	ENSMUST00000049942.6|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000139537.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000124747.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr7_+_35802593_35802593	0.0625786	Hoxa7_Hoxc8	ENSMUST00000052454.2|E130304I02Rik|ENSMUSG00000044997.2|RIKEN cDNA E130304I02 gene
mm10_v2_chr7_+_103550368_103550368	0.0577498	Hoxa7_Hoxc8	ENSMUST00000106888.1|Olfr613|ENSMUSG00000078624.2|olfactory receptor 613
mm10_v2_chr7_-_83550258_83550258	0.045363	Hoxa7_Hoxc8	ENSMUST00000177929.1|Gm10610|ENSMUSG00000094841.1|predicted gene 10610
mm10_v2_chr2_-_79456750_79456761	0.0424754	Hoxa7_Hoxc8	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr1_+_24177610_24177711	0.0411888	Hoxa7_Hoxc8	ENSMUST00000054588.8|Col9a1|ENSMUSG00000026147.10|collagen, type IX, alpha 1
mm10_v2_chr8_+_94152607_94152751	0.0254895	Hoxa7_Hoxc8	ENSMUST00000034211.8|Mt3|ENSMUSG00000031760.8|metallothionein 3
mm10_v2_chr2_+_23069210_23069327	0.0240806	Hoxa7_Hoxc8	ENSMUST00000155602.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr19_+_41933464_41933540	0.0155593	Hoxa7_Hoxc8	ENSMUST00000026154.7|Zdhhc16|ENSMUSG00000025157.7|zinc finger, DHHC domain containing 16
mm10_v2_chrM_+_14138_14154	0.0115426	Hoxa7_Hoxc8	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
