mm10_v2_chr1_-_56978534_56978650	6.05469	Hoxc13_Hoxd13	ENSMUST00000177282.1|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr10_-_8518801_8518851	4.68279	Hoxc13_Hoxd13	ENSMUST00000061601.7|Ust|ENSMUSG00000047712.7|uronyl-2-sulfotransferase
mm10_v2_chr5_+_17574268_17574293	3.70682	Hoxc13_Hoxd13	ENSMUST00000030568.7|Sema3c|ENSMUSG00000028780.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm10_v2_chr6_+_108213086_108213123	3.52378	Hoxc13_Hoxd13	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr16_-_74411776_74411792	3.26141	Hoxc13_Hoxd13	ENSMUST00000116586.2|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr18_+_69346143_69346203	2.5323	Hoxc13_Hoxd13	ENSMUST00000114980.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr17_+_75178911_75178961	2.27618	Hoxc13_Hoxd13	ENSMUST00000112514.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr14_-_118052235_118052253	1.9726	Hoxc13_Hoxd13	ENSMUST00000022725.2|Dct|ENSMUSG00000022129.3|dopachrome tautomerase
mm10_v2_chr13_+_16014457_16014475	1.93233	Hoxc13_Hoxd13	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr17_+_75178797_75178824	1.90192	Hoxc13_Hoxd13	ENSMUST00000112516.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1 	ENSMUST00000135447.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr9_+_32696005_32696121	1.05562	Hoxc13_Hoxd13	ENSMUST00000034534.6|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000050797.7|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000184887.1|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain
mm10_v2_chr3_-_142169311_142169425	1.0117	Hoxc13_Hoxd13	ENSMUST00000106230.1|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr17_-_6477102_6477102	0.991124	Hoxc13_Hoxd13	ENSMUST00000167717.2|Tmem181b-ps|ENSMUSG00000079733.3|transmembrane protein 181B, pseudogene
mm10_v2_chr16_+_23226014_23226077	0.970792	Hoxc13_Hoxd13	ENSMUST00000178797.1|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr8_+_112570043_112570060	0.858724	Hoxc13_Hoxd13	ENSMUST00000034225.6|Cntnap4|ENSMUSG00000031772.11|contactin associated protein-like 4 	ENSMUST00000118171.1|Cntnap4|ENSMUSG00000031772.11|contactin associated protein-like 4
mm10_v2_chr7_-_73537621_73537766	0.856707	Hoxc13_Hoxd13	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr8_+_83666827_83666882	0.841895	Hoxc13_Hoxd13	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr3_+_126597415_126597440	0.800237	Hoxc13_Hoxd13	ENSMUST00000066452.7|Camk2d|ENSMUSG00000053819.10|calcium/calmodulin-dependent protein kinase II, delta 	ENSMUST00000171289.1|Camk2d|ENSMUSG00000053819.10|calcium/calmodulin-dependent protein kinase II, delta 	ENSMUST00000106399.1|Camk2d|ENSMUSG00000053819.10|calcium/calmodulin-dependent protein kinase II, delta
mm10_v2_chr16_-_57231434_57231509	0.785293	Hoxc13_Hoxd13	ENSMUST00000023431.6|Tbc1d23|ENSMUSG00000022749.6|TBC1 domain family, member 23
mm10_v2_chr3_-_142169196_142169261	0.777614	Hoxc13_Hoxd13	ENSMUST00000098568.1|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr4_+_54945038_54945082	0.752653	Hoxc13_Hoxd13	ENSMUST00000133895.1|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr17_+_43568269_43568303	0.742636	Hoxc13_Hoxd13	ENSMUST00000024706.5|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr3_+_126597299_126597413	0.712122	Hoxc13_Hoxd13	ENSMUST00000106400.2|Camk2d|ENSMUSG00000053819.10|calcium/calmodulin-dependent protein kinase II, delta 	ENSMUST00000106401.1|Camk2d|ENSMUSG00000053819.10|calcium/calmodulin-dependent protein kinase II, delta
mm10_v2_chr4_-_110290884_110290913	0.705578	Hoxc13_Hoxd13	ENSMUST00000142722.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr12_-_48559971_48559971	0.695229	Hoxc13_Hoxd13	ENSMUST00000169406.1|Gm1818|ENSMUSG00000091277.1|predicted gene 1818
mm10_v2_chr5_-_62766153_62766246	0.673725	Hoxc13_Hoxd13	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr17_+_43568641_43568676	0.667226	Hoxc13_Hoxd13	ENSMUST00000169694.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr9_-_96719404_96719479	0.660638	Hoxc13_Hoxd13	ENSMUST00000140121.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr9_-_96719549_96719565	0.657619	Hoxc13_Hoxd13	ENSMUST00000128269.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr8_+_56551090_56551143	0.624362	Hoxc13_Hoxd13	ENSMUST00000040218.5|Fbxo8|ENSMUSG00000038206.6|F-box protein 8 	ENSMUST00000110322.3|Fbxo8|ENSMUSG00000038206.6|F-box protein 8
mm10_v2_chr17_+_6270475_6270475	0.604929	Hoxc13_Hoxd13	ENSMUST00000088940.4|Tmem181a|ENSMUSG00000038141.8|transmembrane protein 181A
mm10_v2_chr17_-_90088343_90088373	0.58461	Hoxc13_Hoxd13	ENSMUST00000173917.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr1_-_156939387_156939549	0.579271	Hoxc13_Hoxd13	ENSMUST00000171292.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr17_+_8283762_8283852	0.556834	Hoxc13_Hoxd13	ENSMUST00000155364.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000046754.8|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000124023.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1
mm10_v2_chr12_-_34528844_34528904	0.539676	Hoxc13_Hoxd13	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr4_-_133602168_133602168	0.462098	Hoxc13_Hoxd13	ENSMUST00000057311.3|Sfn|ENSMUSG00000047281.3|stratifin
mm10_v2_chr17_+_43568475_43568493	0.44202	Hoxc13_Hoxd13	ENSMUST00000167418.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr17_-_51826562_51826601	0.426038	Hoxc13_Hoxd13	ENSMUST00000024720.4|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000129667.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000156051.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000169480.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000148559.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr8_-_70139197_70139261	0.350706	Hoxc13_Hoxd13	ENSMUST00000075724.7|Rfxank|ENSMUSG00000036120.9|regulatory factor X-associated ankyrin-containing protein
mm10_v2_chr2_-_127792467_127792505	0.332348	Hoxc13_Hoxd13	ENSMUST00000135091.1|1500011K16Rik|ENSMUSG00000051319.6|RIKEN cDNA 1500011K16 gene
mm10_v2_chr3_+_59006978_59006978	0.324817	Hoxc13_Hoxd13	ENSMUST00000040325.7|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000164225.1|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000040846.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000029393.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm10_v2_chr9_-_64022043_64022066	0.320529	Hoxc13_Hoxd13	ENSMUST00000041029.5|Smad6|ENSMUSG00000036867.7|SMAD family member 6
mm10_v2_chr1_-_74124420_74124466	0.314282	Hoxc13_Hoxd13	ENSMUST00000169786.1|Tns1|ENSMUSG00000055322.8|tensin 1
mm10_v2_chr3_+_76074270_76074270	0.311873	Hoxc13_Hoxd13	ENSMUST00000038364.8|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr18_+_37484955_37485028	0.31036	Hoxc13_Hoxd13	ENSMUST00000053856.4|Pcdhb17|ENSMUSG00000046387.4|protocadherin beta 17
mm10_v2_chr2_-_66440753_66440846	0.299131	Hoxc13_Hoxd13	ENSMUST00000112371.2|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha 	ENSMUST00000138910.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr9_-_77347816_77347887	0.284176	Hoxc13_Hoxd13	ENSMUST00000184138.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184006.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000185144.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000034910.9|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr18_+_37355271_37355271	0.240006	Hoxc13_Hoxd13	ENSMUST00000051163.1|Pcdhb8|ENSMUSG00000045876.3|protocadherin beta 8
mm10_v2_chr3_+_79885930_79886002	0.235268	Hoxc13_Hoxd13	ENSMUST00000029567.8|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr18_-_46280820_46280850	0.233714	Hoxc13_Hoxd13	ENSMUST00000025354.3|Pggt1b|ENSMUSG00000024477.3|protein geranylgeranyltransferase type I, beta subunit
mm10_v2_chr9_-_77347787_77347815	0.227793	Hoxc13_Hoxd13	ENSMUST00000184848.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184415.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr11_-_95699143_95699143	0.225118	Hoxc13_Hoxd13	ENSMUST00000062249.2|Gm9796|ENSMUSG00000045075.2|predicted gene 9796
mm10_v2_chr13_-_23571151_23571220	0.223271	Hoxc13_Hoxd13	ENSMUST00000102969.3|Hist1h2ae|ENSMUSG00000069272.4|histone cluster 1, H2ae
mm10_v2_chr12_+_69963452_69963474	0.218219	Hoxc13_Hoxd13	ENSMUST00000110560.1|Gm3086|ENSMUSG00000079076.1|predicted gene 3086
mm10_v2_chr1_-_163289214_163289235	0.20488	Hoxc13_Hoxd13	ENSMUST00000183691.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr10_-_120979327_120979373	0.204385	Hoxc13_Hoxd13	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr4_-_82850721_82850814	0.19834	Hoxc13_Hoxd13	ENSMUST00000139401.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr1_-_36273425_36273443	0.182894	Hoxc13_Hoxd13	ENSMUST00000056946.6|Neurl3|ENSMUSG00000047180.6|neuralized homolog 3 homolog (Drosophila)
mm10_v2_chr5_-_62765618_62765656	0.157564	Hoxc13_Hoxd13	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr4_+_21879662_21879702	0.154582	Hoxc13_Hoxd13	ENSMUST00000029909.2|Coq3|ENSMUSG00000028247.2|coenzyme Q3 homolog, methyltransferase (yeast)
mm10_v2_chr14_-_103346765_103346841	0.136823	Hoxc13_Hoxd13	ENSMUST00000159855.1|Mycbp2|ENSMUSG00000033004.8|MYC binding protein 2
mm10_v2_chr5_+_86804214_86804276	0.128174	Hoxc13_Hoxd13	ENSMUST00000119339.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1 	ENSMUST00000120498.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr5_+_105876532_105876585	0.113175	Hoxc13_Hoxd13	ENSMUST00000150440.1|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326 	ENSMUST00000031227.4|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326
mm10_v2_chr17_-_13761441_13761601	0.0927236	Hoxc13_Hoxd13	ENSMUST00000127032.1|Tcte2|ENSMUSG00000038347.8|t-complex-associated testis expressed 2
mm10_v2_chr13_-_21402688_21402755	0.0906025	Hoxc13_Hoxd13	ENSMUST00000117721.1|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3 	ENSMUST00000070785.8|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3 	ENSMUST00000116433.1|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3 	ENSMUST00000116434.3|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3
mm10_v2_chr14_+_77156733_77156823	0.0851549	Hoxc13_Hoxd13	ENSMUST00000022589.7|Enox1|ENSMUSG00000022012.8|ecto-NOX disulfide-thiol exchanger 1
mm10_v2_chr1_+_59256906_59256907	0.0838968	Hoxc13_Hoxd13	ENSMUST00000160662.1|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15 	ENSMUST00000114248.2|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15
mm10_v2_chr11_-_23895208_23895280	0.0838278	Hoxc13_Hoxd13	ENSMUST00000102863.2|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma 	ENSMUST00000020513.3|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma
mm10_v2_chr7_-_119895446_119895543	0.0783094	Hoxc13_Hoxd13	ENSMUST00000098080.2|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr8_+_34807287_34807310	0.0744736	Hoxc13_Hoxd13	ENSMUST00000033930.4|Dusp4|ENSMUSG00000031530.6|dual specificity phosphatase 4
mm10_v2_chr2_+_112265809_112265858	0.0696479	Hoxc13_Hoxd13	ENSMUST00000110991.2|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr14_-_76110760_76110818	0.0600932	Hoxc13_Hoxd13	ENSMUST00000022585.3|Gpalpp1|ENSMUSG00000022008.3|GPALPP motifs containing 1
mm10_v2_chr6_+_134929089_134929103	0.048939	Hoxc13_Hoxd13	ENSMUST00000183867.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184991.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000183905.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chrX_-_136868537_136868755	0.0456532	Hoxc13_Hoxd13	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr9_+_92542223_92542272	0.0455196	Hoxc13_Hoxd13	ENSMUST00000070522.7|Plod2|ENSMUSG00000032374.8|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 	ENSMUST00000160359.1|Plod2|ENSMUSG00000032374.8|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm10_v2_chr3_+_95658771_95658857	0.0403187	Hoxc13_Hoxd13	ENSMUST00000178686.1|Mcl1|ENSMUSG00000038612.10|myeloid cell leukemia sequence 1
mm10_v2_chr4_-_136602641_136602760	0.0297428	Hoxc13_Hoxd13	ENSMUST00000105847.1|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A 	ENSMUST00000116273.2|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A
mm10_v2_chr8_+_33653238_33653238	0.0261298	Hoxc13_Hoxd13	ENSMUST00000033992.8|Gsr|ENSMUSG00000031584.10|glutathione reductase
mm10_v2_chr9_-_77347889_77347916	0.0122143	Hoxc13_Hoxd13	ENSMUST00000185039.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr11_+_77216180_77216287	0.00288036	Hoxc13_Hoxd13	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
