mm10_v2_chr4_+_105789869_105789869	6.56758	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000184254.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr17_+_82539258_82539258	2.77634	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000097278.3|Gm6594|ENSMUSG00000073371.3|predicted pseudogene 6594
mm10_v2_chr14_+_58893465_58893506	1.97997	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr2_+_20737306_20737321	1.59256	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr4_+_145585166_145585211	1.47648	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105739.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212 	ENSMUST00000119718.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212
mm10_v2_chr17_-_48432723_48432741	1.36059	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046549.3|Apobec2|ENSMUSG00000040694.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm10_v2_chr9_+_119063429_119063467	1.22085	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chr5_+_13398688_13398726	0.952103	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000125629.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr4_+_145510759_145510791	0.950066	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr4_+_108719649_108719649	0.908412	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178992.1|3110021N24Rik|ENSMUSG00000094958.1|RIKEN cDNA 3110021N24 gene
mm10_v2_chr2_-_73580288_73580353	0.885395	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000028515.3|Chrna1|ENSMUSG00000027107.3|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm10_v2_chr10_+_37139558_37139558	0.818995	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr4_-_14621805_14621819	0.792091	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr12_-_84617326_84617466	0.774824	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000021666.4|Abcd4|ENSMUSG00000021240.5|ATP-binding cassette, sub-family D (ALD), member 4
mm10_v2_chr14_-_5863663_5863663	0.736755	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178594.1|Gm8237|ENSMUSG00000090707.2|predicted gene 8237
mm10_v2_chr7_+_39588931_39588931	0.733902	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178791.1|Gm2058|ENSMUSG00000074903.4|predicted gene 2058 	ENSMUST00000098511.3|Gm2058|ENSMUSG00000074903.4|predicted gene 2058
mm10_v2_chr14_+_4198185_4198185	0.547581	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180184.1|Gm2974|ENSMUSG00000079391.4|predicted gene 2974
mm10_v2_chr2_+_119047129_119047159	0.528673	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000153300.1|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5 	ENSMUST00000028799.5|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5
mm10_v2_chr13_+_23533869_23533906	0.526515	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000073261.2|Hist1h2af|ENSMUSG00000061991.2|histone cluster 1, H2af
mm10_v2_chr4_-_14621494_14621506	0.508394	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr14_+_4665094_4665094	0.50545	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000169675.2|Gm3239|ENSMUSG00000090872.2|predicted gene 3239
mm10_v2_chr1_-_172027269_172027313	0.476994	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr2_+_119047116_119047121	0.452313	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000152380.1|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5 	ENSMUST00000099542.2|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5
mm10_v2_chr6_+_37870786_37870882	0.447091	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr10_-_37138863_37138937	0.422748	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr13_+_67863324_67863328	0.419528	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078471.5|BC048507|ENSMUSG00000064063.5|cDNA sequence BC048507
mm10_v2_chr14_+_4126066_4126066	0.385038	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167397.2|Gm8108|ENSMUSG00000091563.2|predicted gene 8108
mm10_v2_chr6_+_124304646_124304671	0.384995	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr4_-_14621669_14621786	0.369433	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr4_-_45532470_45532470	0.366093	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000147448.1|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr2_-_168767136_168767201	0.363371	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029061.5|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila) 	ENSMUST00000103074.1|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chrM_+_9870_9885	0.358171	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chr2_-_168767029_168767104	0.354935	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000075044.3|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr14_-_6266620_6266620	0.349473	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000096172.5|Gm3411|ENSMUSG00000079396.3|predicted gene 3411
mm10_v2_chr10_-_86022325_86022325	0.341355	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000181665.1|A230060F14Rik|ENSMUSG00000097692.1|RIKEN cDNA A230060F14 gene
mm10_v2_chr15_+_34453285_34453312	0.340767	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000060894.7|BC030476|ENSMUSG00000044726.7|cDNA sequence BC030476
mm10_v2_chr14_-_6874257_6874257	0.33258	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179374.1|Gm3629|ENSMUSG00000093898.1|predicted gene 3629 	ENSMUST00000178298.1|Gm3667|ENSMUSG00000090691.2|predicted gene 3667
mm10_v2_chrX_+_16619698_16619758	0.330198	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000026013.5|Maoa|ENSMUSG00000025037.6|monoamine oxidase A
mm10_v2_chr5_-_63968867_63968905	0.326185	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000154169.1|Rell1|ENSMUSG00000047881.8|RELT-like 1
mm10_v2_chrX_-_60893430_60893440	0.315351	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000135107.2|Sox3|ENSMUSG00000045179.8|SRY-box containing gene 3
mm10_v2_chr8_-_106573461_106573462	0.309189	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000073722.5|Gm10073|ENSMUSG00000060019.5|predicted pseudogene 10073
mm10_v2_chr2_+_3424123_3424207	0.302912	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061852.5|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 	ENSMUST00000100463.3|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 	ENSMUST00000102988.3|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 	ENSMUST00000115066.1|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)
mm10_v2_chr10_-_76110956_76110962	0.296239	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000120757.1|Slc5a4b|ENSMUSG00000020226.9|solute carrier family 5 (neutral amino acid transporters, system A), member 4b
mm10_v2_chr14_+_3825596_3825596	0.295686	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178256.1|Gm3002|ENSMUSG00000096793.1|predicted gene 3002
mm10_v2_chr8_-_109251698_109251728	0.282035	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000079189.3|4922502B01Rik|ENSMUSG00000057387.3|RIKEN cDNA 4922502B01 gene
mm10_v2_chr14_+_26119811_26119811	0.281281	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000173617.1|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr12_-_12940600_12940616	0.280727	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130990.1|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr14_+_4741737_4741737	0.279123	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178748.1|Gm3252|ENSMUSG00000094628.1|predicted gene 3252
mm10_v2_chrM_+_10167_10167	0.270811	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr8_-_4779513_4779591	0.268953	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr4_+_103143052_103143071	0.2683	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106855.1|Mier1|ENSMUSG00000028522.10|mesoderm induction early response 1 homolog (Xenopus laevis
mm10_v2_chr3_+_28263205_28263215	0.264413	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr2_+_69670100_69670134	0.26	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000100050.3|Klhl41|ENSMUSG00000075307.3|kelch-like 41
mm10_v2_chr1_-_24612700_24612700	0.259133	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
mm10_v2_chr14_+_3667518_3667518	0.251018	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112801.3|Gm3020|ENSMUSG00000079402.3|predicted gene 3020
mm10_v2_chr14_+_3428103_3428103	0.250092	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178060.1|Gm3005|ENSMUSG00000095195.1|predicted gene 3005
mm10_v2_chr4_+_146610961_146610961	0.249423	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130825.1|Gm13248|ENSMUSG00000063245.5|predicted gene 13248
mm10_v2_chr11_-_107337556_107337637	0.247383	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000040380.6|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr2_-_105017015_105017080	0.242247	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111110.2|Eif3m|ENSMUSG00000027170.6|eukaryotic translation initiation factor 3, subunit M 	ENSMUST00000028592.5|Eif3m|ENSMUSG00000027170.6|eukaryotic translation initiation factor 3, subunit M
mm10_v2_chrX_+_9885622_9885622	0.241275	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000067529.2|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5 	ENSMUST00000086165.3|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5
mm10_v2_chr15_-_64922290_64922315	0.239249	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023007.5|Adcy8|ENSMUSG00000022376.7|adenylate cyclase 8
mm10_v2_chr13_-_100786402_100786570	0.226841	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000174038.1|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000091295.7|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000072119.8|Ccnb1|ENSMUSG00000041431.10|cyclin B1
mm10_v2_chr14_+_5517172_5517172	0.225046	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178220.1|Gm3488|ENSMUSG00000095295.2|predicted gene, 3488
mm10_v2_chr14_+_5164535_5164535	0.225046	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179659.1|Gm3317|ENSMUSG00000095912.1|predicted gene 3317
mm10_v2_chr14_+_3348089_3348089	0.224299	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178722.1|Gm2956|ENSMUSG00000096574.1|predicted gene 2956
mm10_v2_chr5_-_62766153_62766246	0.217923	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr3_+_94372794_94372872	0.216902	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029795.3|Rorc|ENSMUSG00000028150.8|RAR-related orphan receptor gamma
mm10_v2_chr14_+_4430992_4430992	0.215236	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000164603.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173 	ENSMUST00000166848.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr10_-_88605017_88605152	0.214117	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119185.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type 	ENSMUST00000121629.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type
mm10_v2_chr14_+_4514758_4514758	0.212267	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112776.2|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr14_-_6411578_6411578	0.211039	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179312.1|Gm3591|ENSMUSG00000096904.1|predicted gene 3591
mm10_v2_chr9_+_35559460_35559493	0.207574	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000034615.3|Pus3|ENSMUSG00000032103.4|pseudouridine synthase 3 	ENSMUST00000121246.1|Pus3|ENSMUSG00000032103.4|pseudouridine synthase 3
mm10_v2_chr14_-_7473073_7473073	0.206047	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167833.2|Gm3752|ENSMUSG00000091617.2|predicted gene 3752
mm10_v2_chr6_-_57535422_57535447	0.205698	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042766.3|Ppm1k|ENSMUSG00000037826.3|protein phosphatase 1K (PP2C domain containing)
mm10_v2_chr19_+_23723279_23723279	0.204405	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr9_-_107872403_107872422	0.197756	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000183035.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chrX_+_107255878_107256064	0.193206	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000101294.2|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174 	ENSMUST00000118820.1|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174 	ENSMUST00000120971.1|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174
mm10_v2_chr12_+_10390756_10390836	0.190204	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr2_-_121235689_121235846	0.187186	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000142400.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr14_-_19569553_19569553	0.185958	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112595.2|Gm2237|ENSMUSG00000093979.1|predicted gene 2237
mm10_v2_chr8_-_84662841_84662859	0.184837	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000060427.4|Ier2|ENSMUSG00000053560.4|immediate early response 2
mm10_v2_chr11_+_60537978_60538074	0.182665	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr13_-_102906046_102906111	0.16952	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr4_+_147132038_147132038	0.163996	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000084149.3|Gm13139|ENSMUSG00000067916.3|predicted gene 13139
mm10_v2_chr13_+_77135513_77135583	0.162054	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000168779.1|2210408I21Rik|ENSMUSG00000071252.5|RIKEN cDNA 2210408I21 gene
mm10_v2_chr17_-_33033367_33033411	0.160641	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000087654.4|Zfp763|ENSMUSG00000067430.7|zinc finger protein 763
mm10_v2_chr1_-_4880669_4880699	0.159447	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078030.3|Gm6104|ENSMUSG00000062588.3|predicted gene 6104
mm10_v2_chrX_-_160138375_160138435	0.153617	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033662.8|Pdha1|ENSMUSG00000031299.10|pyruvate dehydrogenase E1 alpha 1
mm10_v2_chr2_+_3770673_3770708	0.152854	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000177037.1|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr9_-_22259887_22259949	0.151888	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000086281.4|Zfp599|ENSMUSG00000062794.8|zinc finger protein 599
mm10_v2_chr17_-_36032682_36032855	0.151271	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000102678.4|H2-T23|ENSMUSG00000067212.8|histocompatibility 2, T region locus 23
mm10_v2_chr3_+_40800778_40800786	0.145216	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000169566.1|Plk4|ENSMUSG00000025758.5|polo-like kinase 4
mm10_v2_chr5_-_106926245_106926321	0.142845	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000117588.1|Hfm1|ENSMUSG00000043410.10|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
mm10_v2_chr4_+_74242468_74242497	0.142138	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000077851.3|Kdm4c|ENSMUSG00000028397.7|lysine (K)-specific demethylase 4C
mm10_v2_chrX_-_134111852_134111873	0.141751	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033610.6|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr1_+_161070767_161070767	0.140466	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111618.1|Cenpl|ENSMUSG00000026708.10|centromere protein L 	ENSMUST00000111620.3|Cenpl|ENSMUSG00000026708.10|centromere protein L 	ENSMUST00000028035.7|Cenpl|ENSMUSG00000026708.10|centromere protein L
mm10_v2_chr4_+_136172367_136172395	0.127303	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061721.5|E2f2|ENSMUSG00000018983.9|E2F transcription factor 2
mm10_v2_chr14_+_26259109_26259109	0.126161	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000174494.1|Duxbl3|ENSMUSG00000072672.4|double homeobox B-like 3
mm10_v2_chr4_+_32623985_32624084	0.124259	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr4_-_136602641_136602760	0.124145	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105847.1|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A 	ENSMUST00000116273.2|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A
mm10_v2_chr1_+_194619815_194619833	0.124131	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027952.5|Plxna2|ENSMUSG00000026640.6|plexin A2
mm10_v2_chrX_+_103356464_103356488	0.124111	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr15_-_103215285_103215366	0.123906	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr4_-_147809788_147809840	0.122697	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105734.3|Gm13157|ENSMUSG00000078495.4|predicted gene 13157 	ENSMUST00000176201.1|Gm20707|ENSMUSG00000093594.1|predicted gene 20707
mm10_v2_chr13_-_81710937_81711013	0.118393	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161920.1|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G 	ENSMUST00000048993.5|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G
mm10_v2_chr10_+_115384951_115385021	0.118003	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000036044.8|Zfc3h1|ENSMUSG00000034163.10|zinc finger, C3H1-type containing
mm10_v2_chr10_-_33951190_33951263	0.115415	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000048222.4|Zufsp|ENSMUSG00000039531.7|zinc finger with UFM1-specific peptidase domain
mm10_v2_chr8_+_23411490_23411507	0.114214	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033952.7|Sfrp1|ENSMUSG00000031548.7|secreted frizzled-related protein 1
mm10_v2_chrX_+_56346390_56346415	0.113404	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000101560.3|Zfp449|ENSMUSG00000073176.4|zinc finger protein 449
mm10_v2_chr18_-_46311891_46311928	0.112271	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000072835.6|Ccdc112|ENSMUSG00000071855.4|coiled-coil domain containing 112
mm10_v2_chr17_+_45734506_45734630	0.109113	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr6_-_115037824_115037881	0.106201	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000174848.1|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae) 	ENSMUST00000032461.5|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
mm10_v2_chr18_-_43477764_43477836	0.103121	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chrX_+_134686519_134686536	0.102265	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000124226.2|Armcx4|ENSMUSG00000049804.9|armadillo repeat containing, X-linked 4
mm10_v2_chr18_+_86711520_86711650	0.101634	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000122464.1|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr7_+_39449479_39449523	0.100863	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061201.8|Zfp939|ENSMUSG00000030424.9|zinc finger protein 939
mm10_v2_chr5_+_3543812_3543853	0.0994148	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr11_+_51261719_51261731	0.0958528	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chr5_+_118169712_118169748	0.0934281	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000054836.6|Hrk|ENSMUSG00000046607.6|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm10_v2_chr13_-_102905740_102905814	0.0931851	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr13_-_55100248_55100321	0.0886311	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000026997.5|Uimc1|ENSMUSG00000025878.10|ubiquitin interaction motif containing 1 	ENSMUST00000127195.1|Uimc1|ENSMUSG00000025878.10|ubiquitin interaction motif containing 1 	ENSMUST00000099496.3|Uimc1|ENSMUSG00000025878.10|ubiquitin interaction motif containing 1
mm10_v2_chrX_-_111536325_111536342	0.0885645	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000156639.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr9_-_55512156_55512243	0.0884124	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000034866.8|Etfa|ENSMUSG00000032314.8|electron transferring flavoprotein, alpha polypeptide
mm10_v2_chrM_+_14138_14154	0.0871183	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chr15_-_55548164_55548164	0.0870565	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000165356.1|Mrpl13|ENSMUSG00000022370.7|mitochondrial ribosomal protein L13
mm10_v2_chr9_-_85749308_85749356	0.0867892	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039213.8|Ibtk|ENSMUSG00000035941.9|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm10_v2_chr16_-_64771146_64771184	0.0856861	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr14_+_25980039_25980039	0.0852011	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000173155.1|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr14_+_4871156_4871156	0.0847142	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000166410.2|Gm3264|ENSMUSG00000094132.1|predicted gene 3264
mm10_v2_chr7_-_38019505_38019552	0.084614	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr1_+_85575676_85575676	0.0845987	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178024.1|G530012D18Rik|ENSMUSG00000094127.1|RIKEN cDNA G530012D1 gene
mm10_v2_chr2_-_125782834_125782870	0.0831802	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000053699.6|Secisbp2l|ENSMUSG00000035093.10|SECIS binding protein 2-like
mm10_v2_chr18_+_86711059_86711110	0.0827967	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000068423.3|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr9_+_32224457_32224592	0.0818954	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000183121.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr10_-_77166545_77166556	0.0808352	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000081654.6|Col18a1|ENSMUSG00000001435.8|collagen, type XVIII, alpha 1
mm10_v2_chr6_+_38381469_38381528	0.0763857	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000162554.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26 	ENSMUST00000161751.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26
mm10_v2_chrX_+_170009892_170009892	0.0756913	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180251.1|Gm21887|ENSMUSG00000095562.1|predicted gene, 21887
mm10_v2_chr13_+_83732438_83732566	0.0726177	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000182701.1|C130071C03Rik|ENSMUSG00000050334.6|RIKEN cDNA C130071C03 gene
mm10_v2_chr19_-_9559204_9559248	0.0718311	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000090527.3|Stxbp3b|ENSMUSG00000071640.2|syntaxin-binding protein 3B
mm10_v2_chr19_-_44107447_44107492	0.0717747	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119591.1|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase 	ENSMUST00000026217.4|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase
mm10_v2_chr16_-_16359016_16359040	0.0717449	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023477.7|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000096229.3|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000115749.1|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like
mm10_v2_chr1_-_133661318_133661386	0.0716101	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179598.1|Zbed6|ENSMUSG00000094410.1|zinc finger, BED domain containing 6 	ENSMUST00000027736.6|Zc3h11a|ENSMUSG00000026464.6|zinc finger CCCH type containing 11A
mm10_v2_chr11_-_87359011_87359081	0.0707615	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr2_+_121956651_121956664	0.0707446	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110574.1|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr19_-_41933276_41933319	0.0689138	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000075280.4|Exosc1|ENSMUSG00000034321.7|exosome component 1 	ENSMUST00000112123.2|Exosc1|ENSMUSG00000034321.7|exosome component 1
mm10_v2_chr1_-_72284248_72284314	0.0688751	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000097698.4|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase 	ENSMUST00000027381.6|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase
mm10_v2_chr10_-_79097560_79097614	0.0679792	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039271.6|2610008E11Rik|ENSMUSG00000060301.5|RIKEN cDNA 2610008E11 gene
mm10_v2_chr16_+_58408443_58408523	0.0675256	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr1_+_163929765_163929809	0.0672223	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027876.4|Scyl3|ENSMUSG00000026584.8|SCY1-like 3 (S. cerevisiae) 	ENSMUST00000170359.1|Scyl3|ENSMUSG00000026584.8|SCY1-like 3 (S. cerevisiae)
mm10_v2_chr17_+_36958623_36958641	0.0670444	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000173814.1|Znrd1as|ENSMUSG00000036214.7|Znrd1 antisense
mm10_v2_chr4_+_22357543_22357618	0.0665385	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039234.3|Fbxl4|ENSMUSG00000040410.8|F-box and leucine-rich repeat protein 4
mm10_v2_chr2_+_69897220_69897247	0.065698	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr12_+_71831064_71831178	0.0648618	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr11_-_99230998_99231019	0.062679	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000103133.3|Smarce1|ENSMUSG00000037935.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm10_v2_chr10_+_90071095_90071117	0.0625109	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr7_-_126676428_126676439	0.0623962	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106373.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr18_-_56975333_56975376	0.0623789	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chrM_-_14060_14074	0.0616144	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr14_-_75754475_75754563	0.0600599	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000049168.7|Cog3|ENSMUSG00000034893.7|component of oligomeric golgi complex 3
mm10_v2_chr8_-_61902669_61902713	0.0594375	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr10_+_97482350_97482372	0.0592908	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000163448.2|Dcn|ENSMUSG00000019929.9|decorin
mm10_v2_chr2_-_150255591_150255591	0.0586864	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000063463.5|Gm21994|ENSMUSG00000074735.2|predicted gene 21994
mm10_v2_chr3_+_138374121_138374163	0.0583814	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000171054.1|Adh6-ps1|ENSMUSG00000090306.1|alcohol dehydrogenase 6 (class V), pseudogene 1
mm10_v2_chr13_-_58354862_58354862	0.0582694	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr4_-_43558386_43558460	0.0554237	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130353.1|Tln1|ENSMUSG00000028465.10|talin 1
mm10_v2_chrM_+_7005_7022	0.0551111	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr17_+_34969912_34969912	0.0547449	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000173680.1|Gm20481|ENSMUSG00000092609.1|predicted gene 20481
mm10_v2_chr17_-_32822200_32822200	0.0511865	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr12_-_113361232_113361232	0.0509976	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000103423.1|Ighg3|ENSMUSG00000076615.2|Immunoglobulin heavy constant gamma 3
mm10_v2_chr2_+_152669461_152669539	0.0509753	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000125366.1|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000109825.1|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000089059.2|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000079247.3|H13|ENSMUSG00000019188.10|histocompatibility 13
mm10_v2_chr10_-_56228636_56228695	0.0502668	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr14_-_104522615_104522707	0.0502181	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr7_+_100159241_100159315	0.0499635	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032967.3|Lipt2|ENSMUSG00000030725.3|lipoyl(octanoyl) transferase 2 (putative)
mm10_v2_chr2_-_144270852_144270906	0.049551	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110030.3|Snx5|ENSMUSG00000027423.9|sorting nexin 5
mm10_v2_chr15_-_9140374_9140451	0.0495402	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000096482.3|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45) 	ENSMUST00000110585.2|Skp2|ENSMUSG00000054115.5|S-phase kinase-associated protein 2 (p45)
mm10_v2_chrM_+_2743_2761	0.0486306	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr8_-_35495487_35495545	0.0475861	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033927.6|Eri1|ENSMUSG00000031527.6|exoribonuclease 1
mm10_v2_chr5_+_107497762_107497802	0.0467262	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000152474.1|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene 	ENSMUST00000060553.7|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr12_+_116275386_116275386	0.0444026	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000090195.4|Gm11027|ENSMUSG00000078984.1|predicted gene 11027
mm10_v2_chr1_-_161070613_161070674	0.0430385	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000035430.3|Dars2|ENSMUSG00000026709.4|aspartyl-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr10_-_117148474_117148510	0.0419078	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020381.3|Frs2|ENSMUSG00000020170.3|fibroblast growth factor receptor substrate 2
mm10_v2_chr2_+_150323702_150323702	0.0402628	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000133235.2|Gm10130|ENSMUSG00000095315.1|predicted gene 10130
mm10_v2_chr2_+_121956411_121956480	0.0399232	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110578.1|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr7_-_126676357_126676383	0.0398709	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106371.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000106372.3|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000155419.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr11_-_98193260_98193298	0.0382859	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr5_-_43981757_43981773	0.0377091	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061299.7|Fgfbp1|ENSMUSG00000048373.7|fibroblast growth factor binding protein 1
mm10_v2_chr15_+_98571004_98571026	0.0368066	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr7_+_79392305_79392346	0.0359189	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000117227.1|Fanci|ENSMUSG00000039187.10|Fanconi anemia, complementation group I 	ENSMUST00000118959.1|Fanci|ENSMUSG00000039187.10|Fanconi anemia, complementation group I 	ENSMUST00000036865.6|Fanci|ENSMUSG00000039187.10|Fanconi anemia, complementation group I
mm10_v2_chr4_+_133130505_133130590	0.0354826	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000084241.5|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2 	ENSMUST00000138831.1|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2
mm10_v2_chr13_+_59585259_59585441	0.0351026	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000168367.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000022038.7|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000166923.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm10_v2_chr11_+_35121126_35121224	0.0344411	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000069837.3|Slit3|ENSMUSG00000056427.4|slit homolog 3 (Drosophila)
mm10_v2_chr11_-_4095344_4095445	0.0340229	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000004868.5|Mtfp1|ENSMUSG00000004748.5|mitochondrial fission process 1
mm10_v2_chr10_-_9901079_9901250	0.0320129	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141722.1|Stxbp5|ENSMUSG00000019790.10|syntaxin binding protein 5 (tomosyn)
mm10_v2_chr12_-_55302974_55303014	0.0316729	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000021410.8|Ppp2r3c|ENSMUSG00000021022.8|protein phosphatase 2, regulatory subunit B'', gamma
mm10_v2_chr11_+_17257558_17257688	0.0290407	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000000594.2|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor 	ENSMUST00000156784.1|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor
mm10_v2_chr2_-_116067391_116067444	0.0282777	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr8_-_3694167_3694183	0.0278404	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000005678.4|Fcer2a|ENSMUSG00000005540.9|Fc receptor, IgE, low affinity II, alpha polypeptide
mm10_v2_chr15_+_38661904_38661981	0.0275377	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000022904.6|Atp6v1c1|ENSMUSG00000022295.7|ATPase, H+ transporting, lysosomal V1 subunit C1
mm10_v2_chr11_+_86484647_86484716	0.0266659	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020827.6|Rnft1|ENSMUSG00000020521.7|ring finger protein, transmembrane 1
mm10_v2_chr8_+_40354303_40354303	0.0263828	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000136835.1|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr2_+_69897255_69897303	0.0263098	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000131553.1|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr1_+_165461037_165461037	0.0262634	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027853.5|Mpc2|ENSMUSG00000026568.5|mitochondrial pyruvate carrier 2
mm10_v2_chr17_-_36958437_36958500	0.0256293	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113669.2|Znrd1|ENSMUSG00000036315.7|zinc ribbon domain containing, 1
mm10_v2_chr9_-_20959785_20959888	0.0236601	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000177754.1|Dnmt1|ENSMUSG00000004099.9|DNA methyltransferase (cytosine-5) 1
mm10_v2_chr5_+_121397936_121398004	0.0234344	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr1_+_125676969_125677015	0.0218737	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027581.6|Gpr39|ENSMUSG00000026343.6|G protein-coupled receptor 39
mm10_v2_chr10_+_79910856_79910856	0.0210846	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000181321.1|Gm26602|ENSMUSG00000097854.1|predicted gene, 26602
mm10_v2_chr17_+_26715644_26715724	0.0206718	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr3_-_87174657_87174747	0.020342	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000159976.1|Kirrel|ENSMUSG00000041734.9|kin of IRRE like (Drosophila) 	ENSMUST00000107618.2|Kirrel|ENSMUSG00000041734.9|kin of IRRE like (Drosophila)
mm10_v2_chr19_-_29334646_29334670	0.0195608	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000044143.5|Rln1|ENSMUSG00000039097.5|relaxin 1
mm10_v2_chr14_-_45388772_45388836	0.0190833	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046191.7|Gnpnat1|ENSMUSG00000037722.7|glucosamine-phosphate N-acetyltransferase 1
mm10_v2_chr6_+_34029421_34029456	0.0186444	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000070189.3|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing 	ENSMUST00000101564.2|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing
mm10_v2_chrX_-_143933204_143933311	0.0179807	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr13_-_41847626_41847684	0.0174732	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000121404.1|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr17_+_36958571_36958611	0.017191	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000040177.6|Znrd1as|ENSMUSG00000036214.7|Znrd1 antisense
mm10_v2_chr9_+_53771499_53771535	0.0157117	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr1_+_63176818_63176919	0.0149861	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000129339.1|Eef1b2|ENSMUSG00000025967.10|eukaryotic translation elongation factor 1 beta 2
mm10_v2_chr18_-_40219324_40219399	0.0139342	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000025364.4|Yipf5|ENSMUSG00000024487.4|Yip1 domain family, member 5
mm10_v2_chr12_+_55303241_55303286	0.0135394	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000184766.1|1110008L16Rik|ENSMUSG00000021023.8|RIKEN cDNA 1110008L16 gene 	ENSMUST00000183475.1|1110008L16Rik|ENSMUSG00000021023.8|RIKEN cDNA 1110008L16 gene 	ENSMUST00000183654.1|1110008L16Rik|ENSMUSG00000021023.8|RIKEN cDNA 1110008L16 gene
mm10_v2_chr6_-_136941887_136941911	0.0128149	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111891.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr8_+_82863351_82863397	0.0115137	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chr3_+_121291725_121291817	0.0113412	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039442.7|Alg14|ENSMUSG00000039887.7|asparagine-linked glycosylation 14
mm10_v2_chr17_+_34592248_34592329	0.0112278	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000038149.6|Pbx2|ENSMUSG00000034673.8|pre B cell leukemia homeobox 2
mm10_v2_chr7_-_45830776_45830944	0.0108704	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000107723.2|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1 	ENSMUST00000131384.1|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1
mm10_v2_chr12_+_72441852_72441866	0.00925481	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr18_+_4920509_4920586	0.00889427	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000126977.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr2_+_32606979_32607057	0.00867922	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113289.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 	ENSMUST00000095044.3|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr5_-_38480131_38480306	0.00702271	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000143758.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9 	ENSMUST00000067886.5|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chr7_+_128744870_128745020	0.00526962	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042942.8|Sec23ip|ENSMUSG00000055319.7|Sec23 interacting protein
mm10_v2_chr11_+_88047302_88047373	0.00403812	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139129.2|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr9_-_123678873_123678885	0.00382528	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000040960.6|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr2_-_104493690_104493753	0.00316905	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111124.1|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr7_+_127233227_127233317	0.00312807	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000056232.6|Zfp553|ENSMUSG00000045598.9|zinc finger protein 553
mm10_v2_chr3_-_116712644_116712655	0.00216371	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029569.2|Slc35a3|ENSMUSG00000027957.7|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm10_v2_chr4_-_132345686_132345708	0.00190717	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000030726.6|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr12_+_72441933_72441970	0.00178397	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
