mm10_v2_chr7_-_103827922_103828096	3.19273	Lhx3	ENSMUST00000023934.6|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain 	ENSMUST00000153218.1|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain
mm10_v2_chr7_-_45103747_45103822	2.69301	Lhx3	ENSMUST00000003512.7|Fcgrt|ENSMUSG00000003420.7|Fc receptor, IgG, alpha chain transporter
mm10_v2_chr13_+_49608030_49608071	2.23754	Lhx3	ENSMUST00000021822.5|Ogn|ENSMUSG00000021390.5|osteoglycin
mm10_v2_chr17_-_67950908_67950983	1.29171	Lhx3	ENSMUST00000164647.1|Arhgap28|ENSMUSG00000024043.7|Rho GTPase activating protein 28
mm10_v2_chr4_+_136143497_136143497	1.27916	Lhx3	ENSMUST00000008016.2|Id3|ENSMUSG00000007872.3|inhibitor of DNA binding 3
mm10_v2_chr13_-_101692624_101692647	1.18661	Lhx3	ENSMUST00000035532.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr14_+_80000292_80000309	1.00995	Lhx3	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr1_-_158356258_158356313	0.987209	Lhx3	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr3_+_122419772_122419787	0.902516	Lhx3	ENSMUST00000029766.4|Bcar3|ENSMUSG00000028121.4|breast cancer anti-estrogen resistance 3
mm10_v2_chr10_-_33624587_33624769	0.82654	Lhx3	ENSMUST00000160299.1|Clvs2|ENSMUSG00000019785.7|clavesin 2 	ENSMUST00000019920.6|Clvs2|ENSMUSG00000019785.7|clavesin 2
mm10_v2_chr1_-_38821215_38821215	0.758269	Lhx3	ENSMUST00000039612.4|Lonrf2|ENSMUSG00000048814.4|LON peptidase N-terminal domain and ring finger 2
mm10_v2_chr2_-_33087169_33087253	0.724074	Lhx3	ENSMUST00000102810.3|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr5_-_70842617_70842617	0.714868	Lhx3	ENSMUST00000031119.1|Gabrg1|ENSMUSG00000001260.6|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm10_v2_chr2_+_36230426_36230491	0.714775	Lhx3	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr4_+_102589687_102589843	0.710275	Lhx3	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr4_-_14621805_14621819	0.6624	Lhx3	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr19_+_26623419_26623471	0.649272	Lhx3	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr2_-_33086366_33086447	0.636066	Lhx3	ENSMUST00000049618.2|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr11_+_59306920_59306935	0.597114	Lhx3	ENSMUST00000000128.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A 	ENSMUST00000108783.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A
mm10_v2_chr3_+_53845086_53845086	0.575547	Lhx3	ENSMUST00000108014.1|Gm10985|ENSMUSG00000078742.1|predicted gene 10985
mm10_v2_chr3_-_57294880_57294899	0.5601	Lhx3	ENSMUST00000171384.1|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr2_-_164171113_164171113	0.538276	Lhx3	ENSMUST00000045196.3|Kcns1|ENSMUSG00000040164.3|K+ voltage-gated channel, subfamily S, 1
mm10_v2_chr11_+_109543694_109543754	0.528383	Lhx3	ENSMUST00000106696.1|Arsg|ENSMUSG00000020604.7|arylsulfatase G
mm10_v2_chr4_+_118961578_118961612	0.521387	Lhx3	ENSMUST00000058651.4|Lao1|ENSMUSG00000024903.10|L-amino acid oxidase 1
mm10_v2_chr2_+_125136692_125136769	0.517803	Lhx3	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr16_+_11406618_11406675	0.507327	Lhx3	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr1_-_36273425_36273443	0.449612	Lhx3	ENSMUST00000056946.6|Neurl3|ENSMUSG00000047180.6|neuralized homolog 3 homolog (Drosophila)
mm10_v2_chr18_+_37477768_37477835	0.439814	Lhx3	ENSMUST00000051442.5|Pcdhb16|ENSMUSG00000047910.5|protocadherin beta 16
mm10_v2_chr2_-_72986716_72986716	0.424569	Lhx3	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr5_-_62766153_62766246	0.416655	Lhx3	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr5_-_118244861_118245116	0.405087	Lhx3	ENSMUST00000117177.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000133372.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000154786.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000121369.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2
mm10_v2_chr2_-_84425258_84425411	0.393531	Lhx3	ENSMUST00000074262.2|Calcrl|ENSMUSG00000059588.7|calcitonin receptor-like
mm10_v2_chr18_+_57468478_57468541	0.359307	Lhx3	ENSMUST00000091892.2|Ctxn3|ENSMUSG00000069372.2|cortexin 3
mm10_v2_chrX_-_139871637_139871677	0.35536	Lhx3	ENSMUST00000033811.7|Morc4|ENSMUSG00000031434.9|microrchidia 4 	ENSMUST00000087401.5|Morc4|ENSMUSG00000031434.9|microrchidia 4
mm10_v2_chr6_+_96115249_96115311	0.33644	Lhx3	ENSMUST00000075080.5|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr11_-_30198232_30198261	0.329111	Lhx3	ENSMUST00000102838.3|Sptbn1|ENSMUSG00000020315.12|spectrin beta, non-erythrocytic 1
mm10_v2_chr15_+_16778101_16778101	0.325973	Lhx3	ENSMUST00000026432.6|Cdh9|ENSMUSG00000025370.6|cadherin 9
mm10_v2_chr2_+_110597298_110597316	0.315649	Lhx3	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr1_+_177444653_177444669	0.314949	Lhx3	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr17_-_78684262_78684352	0.313116	Lhx3	ENSMUST00000145480.1|Strn|ENSMUSG00000024077.9|striatin, calmodulin binding protein
mm10_v2_chr6_+_34780412_34780467	0.310091	Lhx3	ENSMUST00000115016.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3 	ENSMUST00000115017.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3
mm10_v2_chr8_-_21906412_21906437	0.301618	Lhx3	ENSMUST00000051965.4|Defb11|ENSMUSG00000045337.4|defensin beta 11
mm10_v2_chr10_-_62507737_62507764	0.299276	Lhx3	ENSMUST00000020271.6|Srgn|ENSMUSG00000020077.8|serglycin
mm10_v2_chr3_+_151437887_151437914	0.296545	Lhx3	ENSMUST00000046977.7|Eltd1|ENSMUSG00000039167.7|EGF, latrophilin seven transmembrane domain containing 1
mm10_v2_chr5_-_62765618_62765656	0.28787	Lhx3	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr3_+_66985680_66985692	0.268412	Lhx3	ENSMUST00000065047.6|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr14_+_69347587_69347587	0.265918	Lhx3	ENSMUST00000064831.5|Entpd4|ENSMUSG00000095463.2|ectonucleoside triphosphate diphosphohydrolase 4
mm10_v2_chr10_+_75037066_75037100	0.242064	Lhx3	ENSMUST00000147802.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family 	ENSMUST00000020391.5|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chrX_-_143933089_143933142	0.22283	Lhx3	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr3_-_116712644_116712655	0.219767	Lhx3	ENSMUST00000029569.2|Slc35a3|ENSMUSG00000027957.7|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm10_v2_chr4_+_147492417_147492417	0.21666	Lhx3	ENSMUST00000105721.2|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr15_+_98571004_98571026	0.214086	Lhx3	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr10_+_116143881_116143903	0.207414	Lhx3	ENSMUST00000105271.2|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr10_-_53647080_53647080	0.200841	Lhx3	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr4_-_14621494_14621506	0.196328	Lhx3	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr10_+_75037291_75037332	0.176629	Lhx3	ENSMUST00000139384.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr9_+_113812547_113812621	0.169929	Lhx3	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr3_-_67515487_67515523	0.166661	Lhx3	ENSMUST00000178314.1|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1 	ENSMUST00000054825.4|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1
mm10_v2_chr19_+_20601958_20601974	0.165019	Lhx3	ENSMUST00000087638.3|Aldh1a1|ENSMUSG00000053279.6|aldehyde dehydrogenase family 1, subfamily A1
mm10_v2_chr6_+_124304646_124304671	0.159647	Lhx3	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chrX_-_94123087_94123159	0.156705	Lhx3	ENSMUST00000113925.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked
mm10_v2_chr4_+_147132038_147132038	0.155169	Lhx3	ENSMUST00000084149.3|Gm13139|ENSMUSG00000067916.3|predicted gene 13139
mm10_v2_chrX_-_143933204_143933311	0.147616	Lhx3	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr4_-_14621669_14621786	0.134802	Lhx3	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr3_+_84952146_84952186	0.13082	Lhx3	ENSMUST00000029727.7|Fbxw7|ENSMUSG00000028086.8|F-box and WD-40 domain protein 7
mm10_v2_chr5_+_66968961_66969132	0.109228	Lhx3	ENSMUST00000132991.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr3_+_142620596_142620627	0.108835	Lhx3	ENSMUST00000165774.1|Gbp2|ENSMUSG00000028270.6|guanylate binding protein 2
mm10_v2_chr17_-_36032682_36032855	0.0997312	Lhx3	ENSMUST00000102678.4|H2-T23|ENSMUSG00000067212.8|histocompatibility 2, T region locus 23
mm10_v2_chr10_+_23797052_23797200	0.0891909	Lhx3	ENSMUST00000133289.1|Slc18b1|ENSMUSG00000037455.10|solute carrier family 18, subfamily B, member 1
mm10_v2_chr3_+_136670076_136670186	0.0876109	Lhx3	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr18_+_60774510_60774625	0.0830461	Lhx3	ENSMUST00000025511.3|Rps14|ENSMUSG00000024608.4|ribosomal protein S14
mm10_v2_chr17_-_56036546_56036647	0.0791473	Lhx3	ENSMUST00000003268.9|Sh3gl1|ENSMUSG00000003200.9|SH3-domain GRB2-like 1
mm10_v2_chr5_-_51553896_51553921	0.0783525	Lhx3	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr4_+_146610961_146610961	0.0693469	Lhx3	ENSMUST00000130825.1|Gm13248|ENSMUSG00000063245.5|predicted gene 13248
mm10_v2_chr3_+_66985647_66985678	0.0634799	Lhx3	ENSMUST00000162362.1|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1 	ENSMUST00000065074.7|Rsrc1|ENSMUSG00000034544.11|arginine/serine-rich coiled-coil 1
mm10_v2_chr7_-_30534180_30534180	0.0467974	Lhx3	ENSMUST00000044338.4|Arhgap33|ENSMUSG00000036882.6|Rho GTPase activating protein 33
mm10_v2_chr18_+_60774675_60774686	0.0414031	Lhx3	ENSMUST00000118551.1|Rps14|ENSMUSG00000024608.4|ribosomal protein S14
mm10_v2_chr10_-_64090265_64090297	0.0343276	Lhx3	ENSMUST00000105439.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr4_-_147809788_147809840	0.0314581	Lhx3	ENSMUST00000105734.3|Gm13157|ENSMUSG00000078495.4|predicted gene 13157 	ENSMUST00000176201.1|Gm20707|ENSMUSG00000093594.1|predicted gene 20707
mm10_v2_chr14_-_108914237_108914257	0.0133591	Lhx3	ENSMUST00000100322.2|Slitrk1|ENSMUSG00000075478.2|SLIT and NTRK-like family, member 1
mm10_v2_chr13_+_93304799_93304935	0.00758248	Lhx3	ENSMUST00000080127.5|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chrX_+_66653003_66653031	0.00472656	Lhx3	ENSMUST00000036043.4|Slitrk2|ENSMUSG00000036790.5|SLIT and NTRK-like family, member 2
mm10_v2_chr1_-_24612700_24612700	0.00233288	Lhx3	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
