mm10_v2_chr17_+_82539258_82539258	1.66353	Lhx5_Lmx1b_Lhx1	ENSMUST00000097278.3|Gm6594|ENSMUSG00000073371.3|predicted pseudogene 6594
mm10_v2_chr15_-_93595877_93595909	1.17211	Lhx5_Lmx1b_Lhx1	ENSMUST00000048982.4|Prickle1|ENSMUSG00000036158.6|prickle homolog 1 (Drosophila)
mm10_v2_chr4_+_145510759_145510791	0.867055	Lhx5_Lmx1b_Lhx1	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr11_-_87359011_87359081	0.804881	Lhx5_Lmx1b_Lhx1	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr4_+_145585166_145585211	0.796569	Lhx5_Lmx1b_Lhx1	ENSMUST00000105739.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212 	ENSMUST00000119718.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212
mm10_v2_chr14_+_58893465_58893506	0.63159	Lhx5_Lmx1b_Lhx1	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr4_+_105789869_105789869	0.628966	Lhx5_Lmx1b_Lhx1	ENSMUST00000184254.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr18_-_66860458_66860485	0.603488	Lhx5_Lmx1b_Lhx1	ENSMUST00000057942.2|Mc4r|ENSMUSG00000047259.2|melanocortin 4 receptor
mm10_v2_chr5_+_13398688_13398726	0.59166	Lhx5_Lmx1b_Lhx1	ENSMUST00000125629.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr17_-_48432723_48432741	0.543884	Lhx5_Lmx1b_Lhx1	ENSMUST00000046549.3|Apobec2|ENSMUSG00000040694.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm10_v2_chr2_-_165368723_165368729	0.495613	Lhx5_Lmx1b_Lhx1	ENSMUST00000141140.1|Zfp663|ENSMUSG00000056824.9|zinc finger protein 663 	ENSMUST00000103085.1|Zfp663|ENSMUSG00000056824.9|zinc finger protein 663
mm10_v2_chr10_+_37139558_37139558	0.470052	Lhx5_Lmx1b_Lhx1	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr2_+_3770673_3770708	0.45538	Lhx5_Lmx1b_Lhx1	ENSMUST00000177037.1|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr9_-_69451035_69451035	0.449931	Lhx5_Lmx1b_Lhx1	ENSMUST00000071565.5|Gm4978|ENSMUSG00000062874.5|predicted gene 4978
mm10_v2_chr15_+_99006056_99006056	0.40734	Lhx5_Lmx1b_Lhx1	ENSMUST00000079818.3|Gm8973|ENSMUSG00000064081.3|predicted gene 8973
mm10_v2_chr6_+_11926758_11926790	0.40583	Lhx5_Lmx1b_Lhx1	ENSMUST00000133776.1|Phf14|ENSMUSG00000029629.10|PHD finger protein 14
mm10_v2_chr7_+_39588931_39588931	0.385332	Lhx5_Lmx1b_Lhx1	ENSMUST00000178791.1|Gm2058|ENSMUSG00000074903.4|predicted gene 2058 	ENSMUST00000098511.3|Gm2058|ENSMUSG00000074903.4|predicted gene 2058
mm10_v2_chr2_-_73580288_73580353	0.379945	Lhx5_Lmx1b_Lhx1	ENSMUST00000028515.3|Chrna1|ENSMUSG00000027107.3|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm10_v2_chr1_-_172027269_172027313	0.342657	Lhx5_Lmx1b_Lhx1	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr18_+_55057557_55057585	0.31052	Lhx5_Lmx1b_Lhx1	ENSMUST00000181765.1|Gm4221|ENSMUSG00000096948.1|predicted gene 4221
mm10_v2_chr13_+_77135513_77135583	0.310231	Lhx5_Lmx1b_Lhx1	ENSMUST00000168779.1|2210408I21Rik|ENSMUSG00000071252.5|RIKEN cDNA 2210408I21 gene
mm10_v2_chr19_-_5802640_5802675	0.308854	Lhx5_Lmx1b_Lhx1	ENSMUST00000173523.1|Malat1|ENSMUSG00000092341.2|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 	ENSMUST00000173499.1|Malat1|ENSMUSG00000092341.2|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 	ENSMUST00000172812.2|Malat1|ENSMUSG00000092341.2|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm10_v2_chr6_+_37870786_37870882	0.29054	Lhx5_Lmx1b_Lhx1	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr2_+_20737306_20737321	0.288384	Lhx5_Lmx1b_Lhx1	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr15_-_67113909_67113992	0.284733	Lhx5_Lmx1b_Lhx1	ENSMUST00000092640.5|St3gal1|ENSMUSG00000013846.9|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm10_v2_chr2_-_177267036_177267036	0.27465	Lhx5_Lmx1b_Lhx1	ENSMUST00000108963.1|Gm14409|ENSMUSG00000078869.2|predicted gene 14409
mm10_v2_chr19_-_44107447_44107492	0.274435	Lhx5_Lmx1b_Lhx1	ENSMUST00000119591.1|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase 	ENSMUST00000026217.4|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase
mm10_v2_chr10_-_95673451_95673451	0.262303	Lhx5_Lmx1b_Lhx1	ENSMUST00000099328.1|Anapc15-ps|ENSMUSG00000074780.1|anaphase prompoting complex C subunit 15, pseudogene
mm10_v2_chrX_-_143933204_143933311	0.256647	Lhx5_Lmx1b_Lhx1	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr4_-_45532470_45532470	0.251087	Lhx5_Lmx1b_Lhx1	ENSMUST00000147448.1|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr1_+_19103022_19103043	0.243849	Lhx5_Lmx1b_Lhx1	ENSMUST00000037294.7|Tfap2d|ENSMUSG00000042596.7|transcription factor AP-2, delta
mm10_v2_chrX_+_16619698_16619758	0.236883	Lhx5_Lmx1b_Lhx1	ENSMUST00000026013.5|Maoa|ENSMUSG00000025037.6|monoamine oxidase A
mm10_v2_chr18_-_56975333_56975376	0.236579	Lhx5_Lmx1b_Lhx1	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chr15_+_34453285_34453312	0.228468	Lhx5_Lmx1b_Lhx1	ENSMUST00000060894.7|BC030476|ENSMUSG00000044726.7|cDNA sequence BC030476
mm10_v2_chr1_+_194619815_194619833	0.227783	Lhx5_Lmx1b_Lhx1	ENSMUST00000027952.5|Plxna2|ENSMUSG00000026640.6|plexin A2
mm10_v2_chr2_+_68104671_68104671	0.225822	Lhx5_Lmx1b_Lhx1	ENSMUST00000042456.3|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr12_+_65225513_65225544	0.224278	Lhx5_Lmx1b_Lhx1	ENSMUST00000046331.4|Wdr20b|ENSMUSG00000035560.4|WD repeat domain 20b
mm10_v2_chr9_-_22259887_22259949	0.21442	Lhx5_Lmx1b_Lhx1	ENSMUST00000086281.4|Zfp599|ENSMUSG00000062794.8|zinc finger protein 599
mm10_v2_chr4_-_14621805_14621819	0.202616	Lhx5_Lmx1b_Lhx1	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr9_-_50739365_50739517	0.202273	Lhx5_Lmx1b_Lhx1	ENSMUST00000117093.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000121634.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr8_-_67910911_67910935	0.199896	Lhx5_Lmx1b_Lhx1	ENSMUST00000093468.5|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr3_+_121953213_121953295	0.194104	Lhx5_Lmx1b_Lhx1	ENSMUST00000037958.7|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29 	ENSMUST00000128366.1|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29
mm10_v2_chr1_+_72284367_72284419	0.192554	Lhx5_Lmx1b_Lhx1	ENSMUST00000027380.5|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169 	ENSMUST00000141783.1|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169
mm10_v2_chr11_+_51261719_51261731	0.189813	Lhx5_Lmx1b_Lhx1	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chr9_-_107872403_107872422	0.187654	Lhx5_Lmx1b_Lhx1	ENSMUST00000183035.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chrX_-_143933089_143933142	0.174291	Lhx5_Lmx1b_Lhx1	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr13_+_109926832_109926881	0.17298	Lhx5_Lmx1b_Lhx1	ENSMUST00000117420.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr17_+_21691860_21691860	0.157858	Lhx5_Lmx1b_Lhx1	ENSMUST00000072133.4|Gm10226|ENSMUSG00000067929.3|predicted gene 10226
mm10_v2_chr8_-_106573461_106573462	0.153047	Lhx5_Lmx1b_Lhx1	ENSMUST00000073722.5|Gm10073|ENSMUSG00000060019.5|predicted pseudogene 10073
mm10_v2_chr4_+_102589687_102589843	0.151552	Lhx5_Lmx1b_Lhx1	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr6_-_42710036_42710120	0.148721	Lhx5_Lmx1b_Lhx1	ENSMUST00000045054.4|Fam115a|ENSMUSG00000036667.8|family with sequence similarity 115, member A
mm10_v2_chr17_-_36032682_36032855	0.147044	Lhx5_Lmx1b_Lhx1	ENSMUST00000102678.4|H2-T23|ENSMUSG00000067212.8|histocompatibility 2, T region locus 23
mm10_v2_chr12_-_84617326_84617466	0.145647	Lhx5_Lmx1b_Lhx1	ENSMUST00000021666.4|Abcd4|ENSMUSG00000021240.5|ATP-binding cassette, sub-family D (ALD), member 4
mm10_v2_chr14_+_80000292_80000309	0.143379	Lhx5_Lmx1b_Lhx1	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr18_+_57468478_57468541	0.133	Lhx5_Lmx1b_Lhx1	ENSMUST00000091892.2|Ctxn3|ENSMUSG00000069372.2|cortexin 3
mm10_v2_chrM_-_14060_14074	0.126801	Lhx5_Lmx1b_Lhx1	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr1_-_133661318_133661386	0.126412	Lhx5_Lmx1b_Lhx1	ENSMUST00000179598.1|Zbed6|ENSMUSG00000094410.1|zinc finger, BED domain containing 6 	ENSMUST00000027736.6|Zc3h11a|ENSMUSG00000026464.6|zinc finger CCCH type containing 11A
mm10_v2_chrM_+_14138_14154	0.125327	Lhx5_Lmx1b_Lhx1	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chr9_+_100597686_100597798	0.124362	Lhx5_Lmx1b_Lhx1	ENSMUST00000124487.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr9_+_113812547_113812621	0.123698	Lhx5_Lmx1b_Lhx1	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr3_+_94372794_94372872	0.123693	Lhx5_Lmx1b_Lhx1	ENSMUST00000029795.3|Rorc|ENSMUSG00000028150.8|RAR-related orphan receptor gamma
mm10_v2_chr5_-_28210022_28210034	0.119146	Lhx5_Lmx1b_Lhx1	ENSMUST00000118882.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr17_+_26715644_26715724	0.118961	Lhx5_Lmx1b_Lhx1	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr18_+_37020097_37020230	0.114378	Lhx5_Lmx1b_Lhx1	ENSMUST00000047614.1|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr6_+_34598530_34598587	0.112055	Lhx5_Lmx1b_Lhx1	ENSMUST00000115027.1|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000115026.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr7_+_103550368_103550368	0.111604	Lhx5_Lmx1b_Lhx1	ENSMUST00000106888.1|Olfr613|ENSMUSG00000078624.2|olfactory receptor 613
mm10_v2_chr2_-_125782834_125782870	0.110796	Lhx5_Lmx1b_Lhx1	ENSMUST00000053699.6|Secisbp2l|ENSMUSG00000035093.10|SECIS binding protein 2-like
mm10_v2_chr3_+_41742615_41742725	0.109865	Lhx5_Lmx1b_Lhx1	ENSMUST00000146165.1|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000119572.1|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000108065.2|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000120167.1|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000026867.7|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000026868.7|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed
mm10_v2_chr10_-_56228636_56228695	0.109026	Lhx5_Lmx1b_Lhx1	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr16_-_55283237_55283287	0.107042	Lhx5_Lmx1b_Lhx1	ENSMUST00000036412.3|Zpld1|ENSMUSG00000064310.4|zona pellucida like domain containing 1
mm10_v2_chr2_-_37359274_37359332	0.10657	Lhx5_Lmx1b_Lhx1	ENSMUST00000009174.8|Pdcl|ENSMUSG00000009030.8|phosducin-like
mm10_v2_chr4_-_14621494_14621506	0.104987	Lhx5_Lmx1b_Lhx1	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr3_-_41742471_41742548	0.104613	Lhx5_Lmx1b_Lhx1	ENSMUST00000026866.8|Sclt1|ENSMUSG00000059834.6|sodium channel and clathrin linker 1
mm10_v2_chr12_+_24974914_24974948	0.103124	Lhx5_Lmx1b_Lhx1	ENSMUST00000066652.5|Kidins220|ENSMUSG00000036333.10|kinase D-interacting substrate 220
mm10_v2_chr9_-_15301555_15301607	0.102925	Lhx5_Lmx1b_Lhx1	ENSMUST00000034414.8|4931406C07Rik|ENSMUSG00000031938.8|RIKEN cDNA 4931406C07 gene
mm10_v2_chrX_-_75578188_75578247	0.0987664	Lhx5_Lmx1b_Lhx1	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr2_+_181837854_181837913	0.0986681	Lhx5_Lmx1b_Lhx1	ENSMUST00000029116.7|Pcmtd2|ENSMUSG00000027589.8|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 	ENSMUST00000108754.1|Pcmtd2|ENSMUSG00000027589.8|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
mm10_v2_chr12_+_10390756_10390836	0.0976834	Lhx5_Lmx1b_Lhx1	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr15_-_103215285_103215366	0.0955085	Lhx5_Lmx1b_Lhx1	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr11_-_98193260_98193298	0.0949822	Lhx5_Lmx1b_Lhx1	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr4_+_74242468_74242497	0.0948708	Lhx5_Lmx1b_Lhx1	ENSMUST00000077851.3|Kdm4c|ENSMUSG00000028397.7|lysine (K)-specific demethylase 4C
mm10_v2_chr13_+_21362826_21362883	0.0945951	Lhx5_Lmx1b_Lhx1	ENSMUST00000053293.6|Zscan12|ENSMUSG00000036721.7|zinc finger and SCAN domain containing 12
mm10_v2_chr6_+_38381469_38381528	0.0936158	Lhx5_Lmx1b_Lhx1	ENSMUST00000162554.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26 	ENSMUST00000161751.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26
mm10_v2_chr3_+_32436376_32436376	0.0923906	Lhx5_Lmx1b_Lhx1	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr1_+_17145357_17145431	0.0916088	Lhx5_Lmx1b_Lhx1	ENSMUST00000026879.7|Gdap1|ENSMUSG00000025777.7|ganglioside-induced differentiation-associated-protein 1
mm10_v2_chr8_+_34054622_34054647	0.0914019	Lhx5_Lmx1b_Lhx1	ENSMUST00000149618.1|Gm9951|ENSMUSG00000054618.8|predicted gene 9951
mm10_v2_chr10_-_63927434_63927434	0.0887759	Lhx5_Lmx1b_Lhx1	ENSMUST00000079279.3|Gm10118|ENSMUSG00000062561.3|predicted gene 10118
mm10_v2_chr15_+_55307743_55307762	0.0880436	Lhx5_Lmx1b_Lhx1	ENSMUST00000023053.5|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110221.2|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110217.3|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1
mm10_v2_chr2_+_148681199_148681218	0.0870065	Lhx5_Lmx1b_Lhx1	ENSMUST00000131292.1|Gzf1|ENSMUSG00000027439.9|GDNF-inducible zinc finger protein 1
mm10_v2_chr18_-_20682963_20683006	0.0863429	Lhx5_Lmx1b_Lhx1	ENSMUST00000165229.2|Gm10269|ENSMUSG00000091449.2|predicted gene 10269
mm10_v2_chr10_+_115384951_115385021	0.0851138	Lhx5_Lmx1b_Lhx1	ENSMUST00000036044.8|Zfc3h1|ENSMUSG00000034163.10|zinc finger, C3H1-type containing
mm10_v2_chr16_-_45844228_45844236	0.0835536	Lhx5_Lmx1b_Lhx1	ENSMUST00000076333.5|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr11_+_17257558_17257688	0.0834099	Lhx5_Lmx1b_Lhx1	ENSMUST00000000594.2|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor 	ENSMUST00000156784.1|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor
mm10_v2_chr2_+_3424123_3424207	0.0834003	Lhx5_Lmx1b_Lhx1	ENSMUST00000061852.5|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 	ENSMUST00000100463.3|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 	ENSMUST00000102988.3|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 	ENSMUST00000115066.1|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)
mm10_v2_chr17_-_32822200_32822200	0.0813626	Lhx5_Lmx1b_Lhx1	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr3_+_19187321_19187351	0.0810965	Lhx5_Lmx1b_Lhx1	ENSMUST00000130806.1|Mtfr1|ENSMUSG00000027601.7|mitochondrial fission regulator 1 	ENSMUST00000117529.1|Mtfr1|ENSMUSG00000027601.7|mitochondrial fission regulator 1 	ENSMUST00000119865.1|Mtfr1|ENSMUSG00000027601.7|mitochondrial fission regulator 1
mm10_v2_chr3_-_113577743_113577830	0.0798356	Lhx5_Lmx1b_Lhx1	ENSMUST00000067980.5|Amy1|ENSMUSG00000074264.6|amylase 1, salivary
mm10_v2_chr15_-_84856043_84856057	0.0796196	Lhx5_Lmx1b_Lhx1	ENSMUST00000159939.1|Phf21b|ENSMUSG00000016624.9|PHD finger protein 21B
mm10_v2_chr2_+_148681023_148681197	0.0794887	Lhx5_Lmx1b_Lhx1	ENSMUST00000028928.7|Gzf1|ENSMUSG00000027439.9|GDNF-inducible zinc finger protein 1
mm10_v2_chr9_+_57504012_57504102	0.0794844	Lhx5_Lmx1b_Lhx1	ENSMUST00000080514.7|Rpp25|ENSMUSG00000062309.7|ribonuclease P/MRP 25 subunit
mm10_v2_chr11_-_107337556_107337637	0.0794224	Lhx5_Lmx1b_Lhx1	ENSMUST00000040380.6|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr12_-_12940600_12940616	0.0778633	Lhx5_Lmx1b_Lhx1	ENSMUST00000130990.1|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr17_+_32993123_32993201	0.0773286	Lhx5_Lmx1b_Lhx1	ENSMUST00000087666.4|Zfp952|ENSMUSG00000053390.9|zinc finger protein 952 	ENSMUST00000157017.1|Zfp952|ENSMUSG00000053390.9|zinc finger protein 952
mm10_v2_chr14_-_52213379_52213379	0.0755794	Lhx5_Lmx1b_Lhx1	ENSMUST00000140603.1|Chd8|ENSMUSG00000053754.7|chromodomain helicase DNA binding protein 8
mm10_v2_chr3_+_90062781_90062836	0.0755493	Lhx5_Lmx1b_Lhx1	ENSMUST00000029551.2|1700094D03Rik|ENSMUSG00000078667.2|RIKEN cDNA 1700094D03 gene
mm10_v2_chr15_+_36179299_36179368	0.0752832	Lhx5_Lmx1b_Lhx1	ENSMUST00000047348.3|Spag1|ENSMUSG00000037617.5|sperm associated antigen 1
mm10_v2_chr8_+_107031218_107031229	0.0734968	Lhx5_Lmx1b_Lhx1	ENSMUST00000034388.9|Vps4a|ENSMUSG00000031913.9|vacuolar protein sorting 4a (yeast)
mm10_v2_chr18_+_12128850_12128868	0.0730893	Lhx5_Lmx1b_Lhx1	ENSMUST00000025270.6|Riok3|ENSMUSG00000024404.6|RIO kinase 3
mm10_v2_chr13_+_46502113_46502140	0.0727661	Lhx5_Lmx1b_Lhx1	ENSMUST00000119341.1|Cap2|ENSMUSG00000021373.9|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm10_v2_chr3_+_32436151_32436151	0.0725093	Lhx5_Lmx1b_Lhx1	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr5_-_129670074_129670100	0.0705276	Lhx5_Lmx1b_Lhx1	ENSMUST00000049778.6|Zfp11|ENSMUSG00000051034.7|zinc finger protein 11
mm10_v2_chr2_-_33718789_33718899	0.0696908	Lhx5_Lmx1b_Lhx1	ENSMUST00000130532.1|9430024E24Rik|ENSMUSG00000085463.1|RIKEN cDNA 9430024E24 gene
mm10_v2_chr12_-_113361232_113361232	0.0694706	Lhx5_Lmx1b_Lhx1	ENSMUST00000103423.1|Ighg3|ENSMUSG00000076615.2|Immunoglobulin heavy constant gamma 3
mm10_v2_chr19_-_9559204_9559248	0.0690188	Lhx5_Lmx1b_Lhx1	ENSMUST00000090527.3|Stxbp3b|ENSMUSG00000071640.2|syntaxin-binding protein 3B
mm10_v2_chr5_+_107497718_107497759	0.0687164	Lhx5_Lmx1b_Lhx1	ENSMUST00000112671.2|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr6_+_52714219_52714440	0.0673493	Lhx5_Lmx1b_Lhx1	ENSMUST00000138040.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000129660.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr14_-_31417666_31417678	0.0671001	Lhx5_Lmx1b_Lhx1	ENSMUST00000100730.3|Sh3bp5|ENSMUSG00000021892.8|SH3-domain binding protein 5 (BTK-associated)
mm10_v2_chr15_+_98571004_98571026	0.0669838	Lhx5_Lmx1b_Lhx1	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr7_+_83755904_83755956	0.0669038	Lhx5_Lmx1b_Lhx1	ENSMUST00000051522.8|Gm7964|ENSMUSG00000063902.6|predicted gene 7964 	ENSMUST00000042280.7|Gm7964|ENSMUSG00000063902.6|predicted gene 7964
mm10_v2_chr16_-_13668122_13668181	0.0656458	Lhx5_Lmx1b_Lhx1	ENSMUST00000058884.8|Parn|ENSMUSG00000022685.8|poly(A)-specific ribonuclease (deadenylation nuclease)
mm10_v2_chr6_-_28397999_28398023	0.0653091	Lhx5_Lmx1b_Lhx1	ENSMUST00000035930.4|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800
mm10_v2_chr4_+_108719649_108719649	0.0645385	Lhx5_Lmx1b_Lhx1	ENSMUST00000178992.1|3110021N24Rik|ENSMUSG00000094958.1|RIKEN cDNA 3110021N24 gene
mm10_v2_chr4_+_32623985_32624084	0.0641101	Lhx5_Lmx1b_Lhx1	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr10_+_79996479_79996505	0.0624543	Lhx5_Lmx1b_Lhx1	ENSMUST00000132517.1|Abca7|ENSMUSG00000035722.9|ATP-binding cassette, sub-family A (ABC1), member 7
mm10_v2_chr17_-_53539411_53539459	0.0598629	Lhx5_Lmx1b_Lhx1	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr6_-_13608011_13608100	0.0593495	Lhx5_Lmx1b_Lhx1	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr16_-_45844303_45844381	0.0593456	Lhx5_Lmx1b_Lhx1	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr16_-_95459245_95459384	0.0592411	Lhx5_Lmx1b_Lhx1	ENSMUST00000176345.1|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related 	ENSMUST00000121809.2|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related 	ENSMUST00000118113.1|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related 	ENSMUST00000122199.1|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm10_v2_chr14_+_26579535_26579612	0.0582586	Lhx5_Lmx1b_Lhx1	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chr15_+_99295087_99295279	0.0574441	Lhx5_Lmx1b_Lhx1	ENSMUST00000128352.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast) 	ENSMUST00000145482.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm10_v2_chr17_-_53867041_53867041	0.0572824	Lhx5_Lmx1b_Lhx1	ENSMUST00000061311.7|Mrps36-ps1|ENSMUSG00000021631.7|mitichondrial ribosomal protein S36, pseudogene 1
mm10_v2_chr5_-_106926245_106926321	0.0570662	Lhx5_Lmx1b_Lhx1	ENSMUST00000117588.1|Hfm1|ENSMUSG00000043410.10|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
mm10_v2_chr9_-_49798729_49798855	0.0563528	Lhx5_Lmx1b_Lhx1	ENSMUST00000166811.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr11_-_17953861_17953897	0.056316	Lhx5_Lmx1b_Lhx1	ENSMUST00000076661.6|Etaa1|ENSMUSG00000016984.7|Ewing's tumor-associated antigen 1
mm10_v2_chr11_+_82781108_82781224	0.0561117	Lhx5_Lmx1b_Lhx1	ENSMUST00000092849.5|Lig3|ENSMUSG00000020697.10|ligase III, DNA, ATP-dependent 	ENSMUST00000021039.5|Lig3|ENSMUSG00000020697.10|ligase III, DNA, ATP-dependent 	ENSMUST00000080461.5|Lig3|ENSMUSG00000020697.10|ligase III, DNA, ATP-dependent 	ENSMUST00000173347.1|Lig3|ENSMUSG00000020697.10|ligase III, DNA, ATP-dependent 	ENSMUST00000173727.1|Lig3|ENSMUSG00000020697.10|ligase III, DNA, ATP-dependent 	ENSMUST00000173009.1|Lig3|ENSMUSG00000020697.10|ligase III, DNA, ATP-dependent 	ENSMUST00000131537.2|Lig3|ENSMUSG00000020697.10|ligase III, DNA, ATP-dependent 	ENSMUST00000173722.1|Lig3|ENSMUSG00000020697.10|ligase III, DNA, ATP-dependent
mm10_v2_chr5_+_121749196_121749196	0.0554574	Lhx5_Lmx1b_Lhx1	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr9_-_49798905_49798931	0.0552048	Lhx5_Lmx1b_Lhx1	ENSMUST00000114476.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr4_+_32657107_32657166	0.0546311	Lhx5_Lmx1b_Lhx1	ENSMUST00000071642.4|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast) 	ENSMUST00000178134.1|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast)
mm10_v2_chr8_-_122915987_122915987	0.0544431	Lhx5_Lmx1b_Lhx1	ENSMUST00000098333.4|Ankrd11|ENSMUSG00000035569.10|ankyrin repeat domain 11
mm10_v2_chr9_+_80165079_80165227	0.0535041	Lhx5_Lmx1b_Lhx1	ENSMUST00000184480.1|Myo6|ENSMUSG00000033577.12|myosin VI
mm10_v2_chr3_+_107291215_107291280	0.050021	Lhx5_Lmx1b_Lhx1	ENSMUST00000029502.7|Slc16a4|ENSMUSG00000027896.9|solute carrier family 16 (monocarboxylic acid transporters), member 4
mm10_v2_chr12_+_116275386_116275386	0.0473181	Lhx5_Lmx1b_Lhx1	ENSMUST00000090195.4|Gm11027|ENSMUSG00000078984.1|predicted gene 11027
mm10_v2_chr8_-_83442648_83442667	0.0469872	Lhx5_Lmx1b_Lhx1	ENSMUST00000167525.1|Scoc|ENSMUSG00000063253.4|short coiled-coil protein
mm10_v2_chr14_+_79515618_79515694	0.0462758	Lhx5_Lmx1b_Lhx1	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr13_-_55100248_55100321	0.0443033	Lhx5_Lmx1b_Lhx1	ENSMUST00000026997.5|Uimc1|ENSMUSG00000025878.10|ubiquitin interaction motif containing 1 	ENSMUST00000127195.1|Uimc1|ENSMUSG00000025878.10|ubiquitin interaction motif containing 1 	ENSMUST00000099496.3|Uimc1|ENSMUSG00000025878.10|ubiquitin interaction motif containing 1
mm10_v2_chrX_-_134111852_134111873	0.0434324	Lhx5_Lmx1b_Lhx1	ENSMUST00000033610.6|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr12_+_55303241_55303286	0.0416353	Lhx5_Lmx1b_Lhx1	ENSMUST00000184766.1|1110008L16Rik|ENSMUSG00000021023.8|RIKEN cDNA 1110008L16 gene 	ENSMUST00000183475.1|1110008L16Rik|ENSMUSG00000021023.8|RIKEN cDNA 1110008L16 gene 	ENSMUST00000183654.1|1110008L16Rik|ENSMUSG00000021023.8|RIKEN cDNA 1110008L16 gene
mm10_v2_chr1_-_9944103_9944127	0.041528	Lhx5_Lmx1b_Lhx1	ENSMUST00000182498.1|Snhg6|ENSMUSG00000098234.1|small nucleolar RNA host gene (non-protein coding) 6 	ENSMUST00000182742.1|Snhg6|ENSMUSG00000098234.1|small nucleolar RNA host gene (non-protein coding) 6 	ENSMUST00000182580.1|Snhg6|ENSMUSG00000098234.1|small nucleolar RNA host gene (non-protein coding) 6
mm10_v2_chr1_+_128244122_128244181	0.0411891	Lhx5_Lmx1b_Lhx1	ENSMUST00000027592.3|Ubxn4|ENSMUSG00000026353.3|UBX domain protein 4
mm10_v2_chr1_-_24005608_24005656	0.0401675	Lhx5_Lmx1b_Lhx1	ENSMUST00000027338.3|1110058L19Rik|ENSMUSG00000026154.4|RIKEN cDNA 1110058L19 gene
mm10_v2_chrX_+_9885622_9885622	0.0388779	Lhx5_Lmx1b_Lhx1	ENSMUST00000067529.2|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5 	ENSMUST00000086165.3|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5
mm10_v2_chr10_+_23797052_23797200	0.0387262	Lhx5_Lmx1b_Lhx1	ENSMUST00000133289.1|Slc18b1|ENSMUSG00000037455.10|solute carrier family 18, subfamily B, member 1
mm10_v2_chr2_-_105017015_105017080	0.0386751	Lhx5_Lmx1b_Lhx1	ENSMUST00000111110.2|Eif3m|ENSMUSG00000027170.6|eukaryotic translation initiation factor 3, subunit M 	ENSMUST00000028592.5|Eif3m|ENSMUSG00000027170.6|eukaryotic translation initiation factor 3, subunit M
mm10_v2_chr1_+_85575676_85575676	0.0378254	Lhx5_Lmx1b_Lhx1	ENSMUST00000178024.1|G530012D18Rik|ENSMUSG00000094127.1|RIKEN cDNA G530012D1 gene
mm10_v2_chr9_+_78051938_78051958	0.0377289	Lhx5_Lmx1b_Lhx1	ENSMUST00000024104.7|Gcm1|ENSMUSG00000023333.7|glial cells missing homolog 1 (Drosophila)
mm10_v2_chr11_-_11970540_11970642	0.0362179	Lhx5_Lmx1b_Lhx1	ENSMUST00000109653.1|Grb10|ENSMUSG00000020176.11|growth factor receptor bound protein 10
mm10_v2_chr12_-_55302974_55303014	0.0355535	Lhx5_Lmx1b_Lhx1	ENSMUST00000021410.8|Ppp2r3c|ENSMUSG00000021022.8|protein phosphatase 2, regulatory subunit B'', gamma
mm10_v2_chrM_+_7005_7022	0.0342845	Lhx5_Lmx1b_Lhx1	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr3_-_62506970_62507027	0.0332716	Lhx5_Lmx1b_Lhx1	ENSMUST00000029336.4|Dhx36|ENSMUSG00000027770.4|DEAH (Asp-Glu-Ala-His) box polypeptide 36
mm10_v2_chr18_-_73754457_73754503	0.032378	Lhx5_Lmx1b_Lhx1	ENSMUST00000041138.2|Elac1|ENSMUSG00000036941.2|elaC homolog 1 (E. coli)
mm10_v2_chr4_-_136602641_136602760	0.0314577	Lhx5_Lmx1b_Lhx1	ENSMUST00000105847.1|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A 	ENSMUST00000116273.2|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A
mm10_v2_chr11_-_98438941_98439008	0.0310519	Lhx5_Lmx1b_Lhx1	ENSMUST00000002655.7|Mien1|ENSMUSG00000002580.7|migration and invasion enhancer 1
mm10_v2_chr4_+_102421518_102421573	0.0309138	Lhx5_Lmx1b_Lhx1	ENSMUST00000106904.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr4_-_147809788_147809840	0.0303914	Lhx5_Lmx1b_Lhx1	ENSMUST00000105734.3|Gm13157|ENSMUSG00000078495.4|predicted gene 13157 	ENSMUST00000176201.1|Gm20707|ENSMUSG00000093594.1|predicted gene 20707
mm10_v2_chr14_-_47394253_47394253	0.0301183	Lhx5_Lmx1b_Lhx1	ENSMUST00000177822.1|Dlgap5|ENSMUSG00000037544.7|discs, large (Drosophila) homolog-associated protein 5
mm10_v2_chr18_+_38296805_38296819	0.0290579	Lhx5_Lmx1b_Lhx1	ENSMUST00000171461.1|Rnf14|ENSMUSG00000060450.7|ring finger protein 14
mm10_v2_chr7_+_99594605_99594630	0.0276717	Lhx5_Lmx1b_Lhx1	ENSMUST00000162290.1|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1
mm10_v2_chr11_-_79962374_79962398	0.0275504	Lhx5_Lmx1b_Lhx1	ENSMUST00000108241.1|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000043152.5|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr2_+_131491764_131491943	0.0264753	Lhx5_Lmx1b_Lhx1	ENSMUST00000028806.5|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110179.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110189.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110182.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110183.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110186.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110188.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr5_+_3543812_3543853	0.026064	Lhx5_Lmx1b_Lhx1	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr11_+_113649328_113649328	0.0259816	Lhx5_Lmx1b_Lhx1	ENSMUST00000063776.7|Cog1|ENSMUSG00000018661.11|component of oligomeric golgi complex 1
mm10_v2_chr2_-_20943413_20943424	0.025686	Lhx5_Lmx1b_Lhx1	ENSMUST00000140230.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr18_+_4375583_4375623	0.0244639	Lhx5_Lmx1b_Lhx1	ENSMUST00000025077.6|Mtpap|ENSMUSG00000024234.6|mitochondrial poly(A) polymerase
mm10_v2_chr12_+_88360535_88360603	0.0228313	Lhx5_Lmx1b_Lhx1	ENSMUST00000101165.2|Adck1|ENSMUSG00000021044.8|aarF domain containing kinase 1
mm10_v2_chr15_+_38661904_38661981	0.0213219	Lhx5_Lmx1b_Lhx1	ENSMUST00000022904.6|Atp6v1c1|ENSMUSG00000022295.7|ATPase, H+ transporting, lysosomal V1 subunit C1
mm10_v2_chr6_+_134640940_134641097	0.0212468	Lhx5_Lmx1b_Lhx1	ENSMUST00000062755.8|Loh12cr1|ENSMUSG00000042992.9|loss of heterozygosity, 12, chromosomal region 1 homolog (human)
mm10_v2_chr4_+_150488368_150488444	0.0204977	Lhx5_Lmx1b_Lhx1	ENSMUST00000105680.2|Rere|ENSMUSG00000039852.10|arginine glutamic acid dipeptide (RE) repeats
mm10_v2_chr5_+_121802230_121802230	0.0203615	Lhx5_Lmx1b_Lhx1	ENSMUST00000162995.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr4_-_14621669_14621786	0.0202782	Lhx5_Lmx1b_Lhx1	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr10_-_76110956_76110962	0.0199985	Lhx5_Lmx1b_Lhx1	ENSMUST00000120757.1|Slc5a4b|ENSMUSG00000020226.9|solute carrier family 5 (neutral amino acid transporters, system A), member 4b
mm10_v2_chrX_-_150657366_150657377	0.0198348	Lhx5_Lmx1b_Lhx1	ENSMUST00000148604.1|Tro|ENSMUSG00000025272.10|trophinin
mm10_v2_chr13_-_83729544_83729584	0.019016	Lhx5_Lmx1b_Lhx1	ENSMUST00000181705.1|Gm26803|ENSMUSG00000097265.1|predicted gene, 26803
mm10_v2_chr11_-_80377975_80378034	0.0182549	Lhx5_Lmx1b_Lhx1	ENSMUST00000179332.1|5730455P16Rik|ENSMUSG00000057181.9|RIKEN cDNA 5730455P16 gene 	ENSMUST00000103225.4|5730455P16Rik|ENSMUSG00000057181.9|RIKEN cDNA 5730455P16 gene 	ENSMUST00000134274.1|5730455P16Rik|ENSMUSG00000057181.9|RIKEN cDNA 5730455P16 gene
mm10_v2_chr18_-_62548721_62548765	0.017405	Lhx5_Lmx1b_Lhx1	ENSMUST00000048688.6|Fbxo38|ENSMUSG00000042211.6|F-box protein 38
mm10_v2_chr16_+_48872608_48872626	0.0172254	Lhx5_Lmx1b_Lhx1	ENSMUST00000065666.4|Retnlg|ENSMUSG00000022651.5|resistin like gamma
mm10_v2_chr6_+_8948608_8948619	0.0169764	Lhx5_Lmx1b_Lhx1	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chrX_+_101449078_101449089	0.0169649	Lhx5_Lmx1b_Lhx1	ENSMUST00000033674.5|Itgb1bp2|ENSMUSG00000031312.5|integrin beta 1 binding protein 2
mm10_v2_chr9_-_113708209_113708259	0.0161684	Lhx5_Lmx1b_Lhx1	ENSMUST00000111861.3|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein 	ENSMUST00000035086.6|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein
mm10_v2_chr1_-_161070613_161070674	0.0145194	Lhx5_Lmx1b_Lhx1	ENSMUST00000035430.3|Dars2|ENSMUSG00000026709.4|aspartyl-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr2_-_154372702_154372735	0.0139144	Lhx5_Lmx1b_Lhx1	ENSMUST00000028990.3|Cdk5rap1|ENSMUSG00000027487.5|CDK5 regulatory subunit associated protein 1 	ENSMUST00000109730.2|Cdk5rap1|ENSMUSG00000027487.5|CDK5 regulatory subunit associated protein 1
mm10_v2_chr12_-_87444017_87444017	0.0137643	Lhx5_Lmx1b_Lhx1	ENSMUST00000091090.4|2700073G19Rik|ENSMUSG00000021041.7|RIKEN cDNA 2700073G19 gene
mm10_v2_chr7_-_133782721_133782762	0.0127776	Lhx5_Lmx1b_Lhx1	ENSMUST00000063669.1|Dhx32|ENSMUSG00000030986.6|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm10_v2_chr16_+_18836573_18836583	0.011794	Lhx5_Lmx1b_Lhx1	ENSMUST00000055413.6|2510002D24Rik|ENSMUSG00000071632.4|RIKEN cDNA 2510002D24 gene
mm10_v2_chr5_-_138171216_138171246	0.0113686	Lhx5_Lmx1b_Lhx1	ENSMUST00000147920.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr7_-_19921139_19921160	0.0105736	Lhx5_Lmx1b_Lhx1	ENSMUST00000043517.7|Pvr|ENSMUSG00000040511.7|poliovirus receptor
mm10_v2_chr6_+_124304646_124304671	0.00976085	Lhx5_Lmx1b_Lhx1	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chrX_-_111536325_111536342	0.00965416	Lhx5_Lmx1b_Lhx1	ENSMUST00000156639.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr18_+_32067729_32067811	0.00954772	Lhx5_Lmx1b_Lhx1	ENSMUST00000025243.3|Iws1|ENSMUSG00000024384.3|IWS1 homolog (S. cerevisiae)
mm10_v2_chr9_+_22475867_22475889	0.00890146	Lhx5_Lmx1b_Lhx1	ENSMUST00000128812.1|Bbs9|ENSMUSG00000035919.10|Bardet-Biedl syndrome 9 (human)
mm10_v2_chr5_-_62766153_62766246	0.00889317	Lhx5_Lmx1b_Lhx1	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr8_-_21906412_21906437	0.00779438	Lhx5_Lmx1b_Lhx1	ENSMUST00000051965.4|Defb11|ENSMUSG00000045337.4|defensin beta 11
mm10_v2_chr18_+_12972225_12972314	0.00737123	Lhx5_Lmx1b_Lhx1	ENSMUST00000025290.5|Impact|ENSMUSG00000024423.5|imprinted and ancient
mm10_v2_chr16_-_29962307_29962307	0.00708142	Lhx5_Lmx1b_Lhx1	ENSMUST00000100016.3|Gm1968|ENSMUSG00000075286.3|predicted gene 1968
mm10_v2_chr18_+_23752333_23752401	0.00692176	Lhx5_Lmx1b_Lhx1	ENSMUST00000170802.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000155708.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000118826.2|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr2_+_65620829_65620857	0.00685497	Lhx5_Lmx1b_Lhx1	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr4_-_149126688_149126763	0.00519024	Lhx5_Lmx1b_Lhx1	ENSMUST00000030815.2|Cort|ENSMUSG00000028971.4|cortistatin
mm10_v2_chr18_+_62548911_62548950	0.005037	Lhx5_Lmx1b_Lhx1	ENSMUST00000055725.4|Spink10|ENSMUSG00000044176.5|serine peptidase inhibitor, Kazal type 10 	ENSMUST00000162365.1|Spink10|ENSMUSG00000044176.5|serine peptidase inhibitor, Kazal type 10
mm10_v2_chr3_+_138374121_138374163	0.004596	Lhx5_Lmx1b_Lhx1	ENSMUST00000171054.1|Adh6-ps1|ENSMUSG00000090306.1|alcohol dehydrogenase 6 (class V), pseudogene 1
mm10_v2_chr4_+_43493345_43493430	0.00454139	Lhx5_Lmx1b_Lhx1	ENSMUST00000030181.5|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107 	ENSMUST00000107922.2|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107
mm10_v2_chrX_+_159459125_159459165	0.00436819	Lhx5_Lmx1b_Lhx1	ENSMUST00000043151.5|Map7d2|ENSMUSG00000041020.8|MAP7 domain containing 2 	ENSMUST00000112470.1|Map7d2|ENSMUSG00000041020.8|MAP7 domain containing 2 	ENSMUST00000156172.1|Map7d2|ENSMUSG00000041020.8|MAP7 domain containing 2
mm10_v2_chr14_-_104522615_104522707	0.00434915	Lhx5_Lmx1b_Lhx1	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr18_-_43477764_43477836	0.00356819	Lhx5_Lmx1b_Lhx1	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr6_-_39377681_39377710	0.00279011	Lhx5_Lmx1b_Lhx1	ENSMUST00000090243.4|Slc37a3|ENSMUSG00000029924.9|solute carrier family 37 (glycerol-3-phosphate transporter), member 3
mm10_v2_chr17_+_50698525_50698553	0.00222243	Lhx5_Lmx1b_Lhx1	ENSMUST00000061681.7|Gm7334|ENSMUSG00000044645.7|predicted gene 7334
mm10_v2_chr9_-_35558522_35558548	0.00215336	Lhx5_Lmx1b_Lhx1	ENSMUST00000034612.5|Ddx25|ENSMUSG00000032101.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25
mm10_v2_chr1_+_161070767_161070767	0.00212984	Lhx5_Lmx1b_Lhx1	ENSMUST00000111618.1|Cenpl|ENSMUSG00000026708.10|centromere protein L 	ENSMUST00000111620.3|Cenpl|ENSMUSG00000026708.10|centromere protein L 	ENSMUST00000028035.7|Cenpl|ENSMUSG00000026708.10|centromere protein L
mm10_v2_chr15_+_81744848_81744848	0.0018512	Lhx5_Lmx1b_Lhx1	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr7_+_100159241_100159315	0.000744144	Lhx5_Lmx1b_Lhx1	ENSMUST00000032967.3|Lipt2|ENSMUSG00000030725.3|lipoyl(octanoyl) transferase 2 (putative)
