mm10_v2_chr10_+_4611971_4612021	1.33098	Nkx2-4	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr12_+_38781093_38781129	0.663125	Nkx2-4	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_+_38780817_38780854	0.647438	Nkx2-4	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr14_-_47418407_47418407	0.621464	Nkx2-4	ENSMUST00000043296.3|Dlgap5|ENSMUSG00000037544.7|discs, large (Drosophila) homolog-associated protein 5
mm10_v2_chr7_-_115824699_115824752	0.620706	Nkx2-4	ENSMUST00000169129.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr13_+_108316395_108316422	0.594974	Nkx2-4	ENSMUST00000171178.1|Depdc1b|ENSMUSG00000021697.6|DEP domain containing 1B
mm10_v2_chr9_-_58159201_58159239	0.568433	Nkx2-4	ENSMUST00000041477.7|Islr|ENSMUSG00000037206.8|immunoglobulin superfamily containing leucine-rich repeat
mm10_v2_chr10_+_88091070_88091076	0.564212	Nkx2-4	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr9_-_58158498_58158554	0.473029	Nkx2-4	ENSMUST00000168864.2|Islr|ENSMUSG00000037206.8|immunoglobulin superfamily containing leucine-rich repeat
mm10_v2_chr6_+_30568367_30568382	0.469246	Nkx2-4	ENSMUST00000049251.5|Cpa4|ENSMUSG00000039070.5|carboxypeptidase A4
mm10_v2_chr3_+_76593550_76593550	0.468697	Nkx2-4	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr10_+_128232065_128232134	0.409555	Nkx2-4	ENSMUST00000055539.4|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1 	ENSMUST00000105244.1|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1 	ENSMUST00000105243.2|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1 	ENSMUST00000125289.1|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1 	ENSMUST00000105242.1|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1
mm10_v2_chr13_-_66852017_66852017	0.388454	Nkx2-4	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chr3_+_52268337_52268388	0.375227	Nkx2-4	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr13_+_65512678_65512678	0.351393	Nkx2-4	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr4_-_136892867_136893065	0.338439	Nkx2-4	ENSMUST00000046332.5|C1qc|ENSMUSG00000036896.5|complement component 1, q subcomponent, C chain
mm10_v2_chr6_+_134929089_134929103	0.33238	Nkx2-4	ENSMUST00000183867.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184991.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000183905.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chr15_-_26895049_26895049	0.326624	Nkx2-4	ENSMUST00000059204.9|Fbxl7|ENSMUSG00000043556.9|F-box and leucine-rich repeat protein 7
mm10_v2_chr2_+_169632996_169633016	0.317713	Nkx2-4	ENSMUST00000109159.2|Tshz2|ENSMUSG00000047907.10|teashirt zinc finger family member 2
mm10_v2_chr12_-_91746020_91746089	0.315147	Nkx2-4	ENSMUST00000166967.1|Ston2|ENSMUSG00000020961.8|stonin 2
mm10_v2_chr10_+_20347788_20347859	0.314834	Nkx2-4	ENSMUST00000169712.1|Mtfr2|ENSMUSG00000019992.7|mitochondrial fission regulator 2
mm10_v2_chr8_+_45627946_45627975	0.308105	Nkx2-4	ENSMUST00000145458.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr11_-_102579461_102579538	0.306382	Nkx2-4	ENSMUST00000107081.1|Gm11627|ENSMUSG00000078640.3|predicted gene 11627
mm10_v2_chr6_+_134929118_134929164	0.30585	Nkx2-4	ENSMUST00000185152.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184504.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chr19_-_6969746_6969808	0.297756	Nkx2-4	ENSMUST00000025912.8|Plcb3|ENSMUSG00000024960.8|phospholipase C, beta 3
mm10_v2_chr2_+_169633517_169633676	0.296863	Nkx2-4	ENSMUST00000109157.1|Tshz2|ENSMUSG00000047907.10|teashirt zinc finger family member 2
mm10_v2_chr9_+_108560422_108560534	0.289947	Nkx2-4	ENSMUST00000081111.8|Impdh2|ENSMUSG00000062867.8|inosine 5'-phosphate dehydrogenase 2
mm10_v2_chr8_+_66860215_66860287	0.2805	Nkx2-4	ENSMUST00000118009.1|Naf1|ENSMUSG00000014907.9|nuclear assembly factor 1 homolog (S. cerevisiae)
mm10_v2_chr15_+_99055164_99055183	0.272522	Nkx2-4	ENSMUST00000047104.7|Prph|ENSMUSG00000023484.7|peripherin 	ENSMUST00000024249.3|Prph|ENSMUSG00000023484.7|peripherin
mm10_v2_chr1_+_97024681_97024681	0.270577	Nkx2-4	ENSMUST00000054664.7|Gm6430|ENSMUSG00000044757.7|predicted gene 6430
mm10_v2_chr8_+_45627709_45627803	0.255456	Nkx2-4	ENSMUST00000134321.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000135336.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr2_+_156840966_156841017	0.229135	Nkx2-4	ENSMUST00000109564.1|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr1_+_178798438_178798467	0.210038	Nkx2-4	ENSMUST00000160789.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr19_-_45742873_45742915	0.209925	Nkx2-4	ENSMUST00000026241.5|Fgf8|ENSMUSG00000025219.7|fibroblast growth factor 8 	ENSMUST00000026240.7|Fgf8|ENSMUSG00000025219.7|fibroblast growth factor 8 	ENSMUST00000111928.1|Fgf8|ENSMUSG00000025219.7|fibroblast growth factor 8
mm10_v2_chr8_+_45628176_45628219	0.208034	Nkx2-4	ENSMUST00000130850.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr13_-_105271039_105271039	0.187598	Nkx2-4	ENSMUST00000069686.6|Rnf180|ENSMUSG00000021720.10|ring finger protein 180
mm10_v2_chr10_+_42502197_42502290	0.183825	Nkx2-4	ENSMUST00000105499.1|Snx3|ENSMUSG00000019804.6|sorting nexin 3
mm10_v2_chr2_+_61804453_61804538	0.18107	Nkx2-4	ENSMUST00000048934.8|Tbr1|ENSMUSG00000035033.9|T-box brain gene 1
mm10_v2_chr2_+_25180737_25180764	0.178532	Nkx2-4	ENSMUST00000104999.2|Nrarp|ENSMUSG00000078202.2|Notch-regulated ankyrin repeat protein
mm10_v2_chr5_+_89027959_89027967	0.172648	Nkx2-4	ENSMUST00000130041.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr8_+_4248188_4248219	0.163931	Nkx2-4	ENSMUST00000110993.1|Gm14378|ENSMUSG00000089736.1|predicted gene 14378
mm10_v2_chr17_+_86753900_86753914	0.151945	Nkx2-4	ENSMUST00000024954.9|Epas1|ENSMUSG00000024140.9|endothelial PAS domain protein 1
mm10_v2_chr5_+_89028035_89028096	0.142952	Nkx2-4	ENSMUST00000113216.2|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4 	ENSMUST00000134303.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr3_+_96696379_96696396	0.140247	Nkx2-4	ENSMUST00000107076.3|Pias3|ENSMUSG00000028101.12|protein inhibitor of activated STAT 3
mm10_v2_chr13_+_3478226_3478303	0.138835	Nkx2-4	ENSMUST00000181708.1|2810429I04Rik|ENSMUSG00000097709.1|RIKEN cDNA 2810429I04 gene 	ENSMUST00000180836.1|2810429I04Rik|ENSMUSG00000097709.1|RIKEN cDNA 2810429I04 gene 	ENSMUST00000180567.1|2810429I04Rik|ENSMUSG00000097709.1|RIKEN cDNA 2810429I04 gene
mm10_v2_chr3_+_121291725_121291817	0.136271	Nkx2-4	ENSMUST00000039442.7|Alg14|ENSMUSG00000039887.7|asparagine-linked glycosylation 14
mm10_v2_chr17_-_25844514_25844565	0.130765	Nkx2-4	ENSMUST00000176709.1|Rhot2|ENSMUSG00000025733.11|ras homolog gene family, member T2
mm10_v2_chr7_-_100932140_100932200	0.128399	Nkx2-4	ENSMUST00000107032.1|Arhgef17|ENSMUSG00000032875.7|Rho guanine nucleotide exchange factor (GEF) 17
mm10_v2_chr18_-_3281036_3281132	0.11885	Nkx2-4	ENSMUST00000049942.6|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000139537.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000124747.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr9_-_71896047_71896102	0.106013	Nkx2-4	ENSMUST00000184448.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr11_+_110968016_110968042	0.105985	Nkx2-4	ENSMUST00000106636.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENSMUST00000180023.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr14_+_26514554_26514554	0.0984477	Nkx2-4	ENSMUST00000104927.1|Gm2178|ENSMUSG00000078128.1|predicted gene 2178
mm10_v2_chr4_+_62525369_62525369	0.0954901	Nkx2-4	ENSMUST00000062145.1|4933430I17Rik|ENSMUSG00000058046.1|RIKEN cDNA 4933430I17 gene
mm10_v2_chr17_-_25844417_25844428	0.09314	Nkx2-4	ENSMUST00000176591.1|Rhot2|ENSMUSG00000025733.11|ras homolog gene family, member T2
mm10_v2_chr6_+_123229843_123229863	0.0839475	Nkx2-4	ENSMUST00000112554.2|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000024118.4|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000117130.1|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n
mm10_v2_chr7_-_132813095_132813162	0.0783248	Nkx2-4	ENSMUST00000106165.1|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chrX_+_101383726_101383741	0.0776128	Nkx2-4	ENSMUST00000119190.1|Gjb1|ENSMUSG00000047797.8|gap junction protein, beta 1
mm10_v2_chr6_-_29165003_29165008	0.0775243	Nkx2-4	ENSMUST00000007993.9|Rbm28|ENSMUSG00000029701.9|RNA binding motif protein 28
mm10_v2_chr2_+_30061754_30061859	0.077389	Nkx2-4	ENSMUST00000149578.1|Set|ENSMUSG00000054766.7|SET nuclear oncogene 	ENSMUST00000102866.3|Set|ENSMUSG00000054766.7|SET nuclear oncogene
mm10_v2_chr3_-_59220150_59220259	0.0734403	Nkx2-4	ENSMUST00000170388.1|P2ry12|ENSMUSG00000036353.7|purinergic receptor P2Y, G-protein coupled 12
mm10_v2_chr12_+_69963452_69963474	0.0720564	Nkx2-4	ENSMUST00000110560.1|Gm3086|ENSMUSG00000079076.1|predicted gene 3086
mm10_v2_chr11_+_101733011_101733041	0.0715566	Nkx2-4	ENSMUST00000129741.1|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr7_+_82867327_82867357	0.064111	Nkx2-4	ENSMUST00000082237.5|Mex3b|ENSMUSG00000057706.6|mex3 homolog B (C. elegans)
mm10_v2_chr4_-_40279389_40279434	0.0567461	Nkx2-4	ENSMUST00000108108.2|Ndufb6|ENSMUSG00000071014.4|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 	ENSMUST00000095128.3|Ndufb6|ENSMUSG00000071014.4|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6
mm10_v2_chr2_+_157456917_157457085	0.0564542	Nkx2-4	ENSMUST00000109529.1|Src|ENSMUSG00000027646.9|Rous sarcoma oncogene
mm10_v2_chr8_+_11556061_11556099	0.0537239	Nkx2-4	ENSMUST00000054399.4|Ing1|ENSMUSG00000045969.7|inhibitor of growth family, member 1
mm10_v2_chr3_-_110250963_110251015	0.0505994	Nkx2-4	ENSMUST00000106567.1|Prmt6|ENSMUSG00000049300.10|protein arginine N-methyltransferase 6
mm10_v2_chr1_+_34439851_34439910	0.0498041	Nkx2-4	ENSMUST00000027303.7|Imp4|ENSMUSG00000026127.7|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm10_v2_chr11_+_110968056_110968070	0.0456025	Nkx2-4	ENSMUST00000125692.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr8_-_31739763_31739763	0.0449794	Nkx2-4	ENSMUST00000178878.1|Gm5117|ENSMUSG00000093862.1|predicted gene 5117
mm10_v2_chr17_+_16972910_16972910	0.0424643	Nkx2-4	ENSMUST00000071374.5|BC002059|ENSMUSG00000060149.5|cDNA sequence BC002059
mm10_v2_chr15_-_100669512_100669529	0.035279	Nkx2-4	ENSMUST00000182574.1|Bin2|ENSMUSG00000098112.1|bridging integrator 2 	ENSMUST00000182775.1|Bin2|ENSMUSG00000098112.1|bridging integrator 2
mm10_v2_chr8_+_88199194_88199224	0.0321725	Nkx2-4	ENSMUST00000119033.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000066748.3|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000118952.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5
mm10_v2_chr18_-_3281712_3281747	0.0301131	Nkx2-4	ENSMUST00000182204.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000154705.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000182833.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000151084.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr1_-_63114516_63114667	0.0297308	Nkx2-4	ENSMUST00000097718.2|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D
mm10_v2_chr11_+_98863610_98863646	0.0297066	Nkx2-4	ENSMUST00000142414.1|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2 	ENSMUST00000037480.8|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2
mm10_v2_chr17_-_51832666_51832678	0.0292353	Nkx2-4	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr11_+_101732950_101732965	0.0283835	Nkx2-4	ENSMUST00000039152.7|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr15_-_100669496_100669511	0.0275179	Nkx2-4	ENSMUST00000182814.1|Bin2|ENSMUSG00000098112.1|bridging integrator 2 	ENSMUST00000182068.1|Bin2|ENSMUSG00000098112.1|bridging integrator 2
mm10_v2_chr2_-_93046053_93046172	0.0263199	Nkx2-4	ENSMUST00000111272.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000178666.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000147339.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11
mm10_v2_chr1_+_85650008_85650020	0.0242548	Nkx2-4	ENSMUST00000054279.8|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100 	ENSMUST00000147552.1|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100 	ENSMUST00000153574.1|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100 	ENSMUST00000150967.1|Sp100|ENSMUSG00000026222.10|nuclear antigen Sp100
mm10_v2_chr19_+_55741810_55741842	0.0173784	Nkx2-4	ENSMUST00000111657.3|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000061496.9|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000041717.7|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111662.4|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr4_-_108848619_108848619	0.0170188	Nkx2-4	ENSMUST00000164855.1|A730015C16Rik|ENSMUSG00000090551.1|RIKEN cDNA A730015C16 gene
mm10_v2_chr6_+_94500313_94500353	0.0169579	Nkx2-4	ENSMUST00000061118.8|Slc25a26|ENSMUSG00000045100.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
mm10_v2_chr1_-_34439672_34439672	0.016896	Nkx2-4	ENSMUST00000042493.8|Ccdc115|ENSMUSG00000042111.8|coiled-coil domain containing 115
mm10_v2_chr14_+_48446128_48446276	0.0106579	Nkx2-4	ENSMUST00000124720.1|Tmem260|ENSMUSG00000036339.11|transmembrane protein 260
mm10_v2_chr14_+_55672235_55672298	0.00851718	Nkx2-4	ENSMUST00000002397.5|Gmpr2|ENSMUSG00000002326.5|guanosine monophosphate reductase 2
mm10_v2_chr8_+_31091593_31091650	0.00623056	Nkx2-4	ENSMUST00000161713.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr2_-_27507656_27507662	0.00263934	Nkx2-4	ENSMUST00000154316.1|Brd3|ENSMUSG00000026918.10|bromodomain containing 3
