mm10_v2_chr10_-_13324160_13324242	5.39947	Nkx3-1	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr4_-_140774196_140774236	5.03141	Nkx3-1	ENSMUST00000026381.6|Padi4|ENSMUSG00000025330.6|peptidyl arginine deiminase, type IV
mm10_v2_chrX_+_100625737_100625737	4.27903	Nkx3-1	ENSMUST00000048962.3|Kif4|ENSMUSG00000034311.3|kinesin family member 4
mm10_v2_chr9_+_78191966_78191999	3.45306	Nkx3-1	ENSMUST00000034903.5|Gsta4|ENSMUSG00000032348.5|glutathione S-transferase, alpha 4
mm10_v2_chr4_-_132757162_132757252	3.44242	Nkx3-1	ENSMUST00000030709.8|Smpdl3b|ENSMUSG00000028885.8|sphingomyelin phosphodiesterase, acid-like 3B
mm10_v2_chr1_-_163289214_163289235	3.24045	Nkx3-1	ENSMUST00000183691.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr9_+_72438534_72438578	3.16754	Nkx3-1	ENSMUST00000034746.8|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr9_+_72438519_72438533	3.05466	Nkx3-1	ENSMUST00000184604.1|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chrX_+_56454871_56454887	3.04469	Nkx3-1	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chrX_+_164269371_164269522	2.80517	Nkx3-1	ENSMUST00000145412.1|Pir|ENSMUSG00000031379.7|pirin 	ENSMUST00000033749.7|Pir|ENSMUSG00000031379.7|pirin
mm10_v2_chr10_-_13324250_13324318	2.66714	Nkx3-1	ENSMUST00000105543.1|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr6_+_128362919_128363058	2.51241	Nkx3-1	ENSMUST00000073316.6|Foxm1|ENSMUSG00000001517.8|forkhead box M1
mm10_v2_chr10_-_12861735_12861735	2.512	Nkx3-1	ENSMUST00000076817.4|Utrn|ENSMUSG00000019820.9|utrophin
mm10_v2_chr1_-_175688353_175688353	2.48956	Nkx3-1	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr8_+_114133557_114133597	2.34792	Nkx3-1	ENSMUST00000073521.5|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000066514.6|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr8_+_114133635_114133662	2.27676	Nkx3-1	ENSMUST00000147605.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000134593.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr3_-_104818539_104818572	2.27362	Nkx3-1	ENSMUST00000106774.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10 	ENSMUST00000106775.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10 	ENSMUST00000166979.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10 	ENSMUST00000136148.1|Mov10|ENSMUSG00000002227.9|Moloney leukemia virus 10
mm10_v2_chr18_+_60963517_60963603	2.24141	Nkx3-1	ENSMUST00000115295.2|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000039904.6|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chrX_-_75875101_75875182	2.2333	Nkx3-1	ENSMUST00000114059.3|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr17_+_56304313_56304407	2.19952	Nkx3-1	ENSMUST00000113035.1|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1 	ENSMUST00000113039.2|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1 	ENSMUST00000142387.1|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1
mm10_v2_chr12_+_52516077_52516077	2.19042	Nkx3-1	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr5_-_8422582_8422693	2.15675	Nkx3-1	ENSMUST00000168500.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae) 	ENSMUST00000002368.9|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr8_-_123318553_123318579	2.09747	Nkx3-1	ENSMUST00000118395.1|Fanca|ENSMUSG00000032815.9|Fanconi anemia, complementation group A 	ENSMUST00000035495.8|Fanca|ENSMUSG00000032815.9|Fanconi anemia, complementation group A
mm10_v2_chr3_-_57575907_57575912	2.08743	Nkx3-1	ENSMUST00000120977.1|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chrX_-_75874536_75874590	2.05026	Nkx3-1	ENSMUST00000033547.7|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr3_-_57575760_57575836	2.02669	Nkx3-1	ENSMUST00000029380.7|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr9_-_20976762_20976793	1.9981	Nkx3-1	ENSMUST00000054197.5|S1pr2|ENSMUSG00000043895.5|sphingosine-1-phosphate receptor 2
mm10_v2_chr5_-_86676346_86676369	1.8826	Nkx3-1	ENSMUST00000038448.6|Tmprss11bnl|ENSMUSG00000035861.6|transmembrane protease, serine 11b N terminal like
mm10_v2_chr4_+_32623985_32624084	1.79209	Nkx3-1	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr18_+_82910863_82910885	1.71072	Nkx3-1	ENSMUST00000171238.1|Zfp516|ENSMUSG00000058881.6|zinc finger protein 516
mm10_v2_chr15_-_50882806_50882822	1.66077	Nkx3-1	ENSMUST00000184885.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr1_-_53297001_53297023	1.60715	Nkx3-1	ENSMUST00000126590.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000126412.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000135246.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000027267.7|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae)
mm10_v2_chr17_-_25727364_25727426	1.59216	Nkx3-1	ENSMUST00000170070.1|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18 	ENSMUST00000048054.7|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18
mm10_v2_chr10_+_94514825_94514922	1.56879	Nkx3-1	ENSMUST00000065060.5|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr10_+_100488289_100488289	1.55816	Nkx3-1	ENSMUST00000164751.1|Cep290|ENSMUSG00000019971.9|centrosomal protein 290
mm10_v2_chr2_+_71873224_71873326	1.50888	Nkx3-1	ENSMUST00000006669.5|Pdk1|ENSMUSG00000006494.5|pyruvate dehydrogenase kinase, isoenzyme 1
mm10_v2_chr7_+_58658181_58658294	1.47514	Nkx3-1	ENSMUST00000168747.1|Atp10a|ENSMUSG00000025324.7|ATPase, class V, type 10A
mm10_v2_chr7_+_75455534_75455629	1.3902	Nkx3-1	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr5_-_149051300_149051390	1.38457	Nkx3-1	ENSMUST00000110505.1|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr2_+_110597298_110597316	1.29236	Nkx3-1	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr1_-_133907053_133907172	1.23578	Nkx3-1	ENSMUST00000149380.1|Optc|ENSMUSG00000010311.9|opticin 	ENSMUST00000124051.2|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr4_+_3940747_3940854	1.18921	Nkx3-1	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr4_+_116708571_116708609	1.18449	Nkx3-1	ENSMUST00000106462.2|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000138305.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000125671.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000130828.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163
mm10_v2_chr1_-_133906973_133907014	1.16853	Nkx3-1	ENSMUST00000126123.1|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chrX_-_111537947_111537964	1.1264	Nkx3-1	ENSMUST00000132319.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6 	ENSMUST00000123951.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr12_+_76324905_76324932	1.11807	Nkx3-1	ENSMUST00000172992.1|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr13_-_99900645_99900683	1.10604	Nkx3-1	ENSMUST00000022150.6|Cartpt|ENSMUSG00000021647.6|CART prepropeptide
mm10_v2_chr19_-_61297069_61297069	1.09438	Nkx3-1	ENSMUST00000179346.1|Gm21060|ENSMUSG00000095993.1|predicted gene, 21060
mm10_v2_chr7_+_123123870_123123901	1.09346	Nkx3-1	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr10_+_4432467_4432661	1.08006	Nkx3-1	ENSMUST00000095893.4|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000118544.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000117489.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene
mm10_v2_chr17_+_37270214_37270249	1.0733	Nkx3-1	ENSMUST00000038580.6|H2-M3|ENSMUSG00000016206.6|histocompatibility 2, M region locus 3
mm10_v2_chr7_+_43607169_43607225	1.07144	Nkx3-1	ENSMUST00000120935.1|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819 	ENSMUST00000127765.1|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819 	ENSMUST00000032661.7|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819
mm10_v2_chrX_+_56317608_56317666	1.06595	Nkx3-1	ENSMUST00000151426.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene 	ENSMUST00000138262.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene
mm10_v2_chr18_-_6241470_6241482	1.05895	Nkx3-1	ENSMUST00000163210.1|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr12_+_76324860_76324898	1.05017	Nkx3-1	ENSMUST00000095610.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5 	ENSMUST00000154078.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr5_-_21785115_21785251	0.966749	Nkx3-1	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chr5_-_72559599_72559691	0.964895	Nkx3-1	ENSMUST00000074948.4|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1 	ENSMUST00000087216.5|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1
mm10_v2_chr2_+_79707780_79707927	0.960746	Nkx3-1	ENSMUST00000090760.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000040863.4|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000111780.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm10_v2_chr17_-_56982120_56982161	0.942904	Nkx3-1	ENSMUST00000056113.4|Acer1|ENSMUSG00000045019.4|alkaline ceramidase 1
mm10_v2_chr9_-_124493793_124493793	0.941978	Nkx3-1	ENSMUST00000178787.1|Gm21836|ENSMUSG00000096734.1|predicted gene, 21836
mm10_v2_chr10_-_62486575_62486604	0.935656	Nkx3-1	ENSMUST00000092473.3|Vps26a|ENSMUSG00000020078.9|vacuolar protein sorting 26 homolog A (yeast)
mm10_v2_chr5_+_90367204_90367204	0.935387	Nkx3-1	ENSMUST00000068250.3|Gm9958|ENSMUSG00000054945.3|predicted gene 9958
mm10_v2_chr11_-_80080928_80081001	0.856055	Nkx3-1	ENSMUST00000103233.3|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3 	ENSMUST00000061283.8|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3
mm10_v2_chr4_-_156255327_156255344	0.850328	Nkx3-1	ENSMUST00000179919.1|Samd11|ENSMUSG00000096351.1|sterile alpha motif domain containing 11
mm10_v2_chr11_-_21370452_21370485	0.848861	Nkx3-1	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chr18_-_6241486_6241550	0.845727	Nkx3-1	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr14_+_47663756_47663756	0.832638	Nkx3-1	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr10_-_62814539_62814540	0.831637	Nkx3-1	ENSMUST00000173087.1|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1 	ENSMUST00000174121.1|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr9_+_77921908_77921932	0.812693	Nkx3-1	ENSMUST00000133757.1|Elovl5|ENSMUSG00000032349.7|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm10_v2_chr11_+_97685903_97685966	0.812341	Nkx3-1	ENSMUST00000107583.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr1_-_156034800_156034817	0.805916	Nkx3-1	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr14_+_79515618_79515694	0.777257	Nkx3-1	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr7_+_110627650_110627669	0.761271	Nkx3-1	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr2_-_84775388_84775411	0.721526	Nkx3-1	ENSMUST00000023994.3|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr2_-_84775420_84775444	0.713744	Nkx3-1	ENSMUST00000111641.1|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr11_-_45955183_45955193	0.713549	Nkx3-1	ENSMUST00000109254.1|Thg1l|ENSMUSG00000011254.10|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm10_v2_chr2_+_23069210_23069327	0.708384	Nkx3-1	ENSMUST00000155602.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr7_-_127930066_127930122	0.708304	Nkx3-1	ENSMUST00000032988.8|Prss8|ENSMUSG00000030800.9|protease, serine, 8 (prostasin)
mm10_v2_chr5_+_8422831_8422906	0.68749	Nkx3-1	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr9_+_78051938_78051958	0.659946	Nkx3-1	ENSMUST00000024104.7|Gcm1|ENSMUSG00000023333.7|glial cells missing homolog 1 (Drosophila)
mm10_v2_chr10_-_14718191_14718228	0.638544	Nkx3-1	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr11_+_97685794_97685845	0.612087	Nkx3-1	ENSMUST00000107584.1|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3 	ENSMUST00000107585.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr1_-_193035651_193035728	0.606255	Nkx3-1	ENSMUST00000016344.7|Syt14|ENSMUSG00000016200.8|synaptotagmin XIV
mm10_v2_chr13_+_51408618_51408781	0.593958	Nkx3-1	ENSMUST00000087978.3|S1pr3|ENSMUSG00000067586.3|sphingosine-1-phosphate receptor 3
mm10_v2_chr13_+_80886095_80886201	0.583207	Nkx3-1	ENSMUST00000161441.1|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr13_-_74482943_74482943	0.569374	Nkx3-1	ENSMUST00000074369.6|Zfp825|ENSMUSG00000069208.5|zinc finger protein 825
mm10_v2_chr13_-_41847482_41847490	0.56456	Nkx3-1	ENSMUST00000072012.3|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr14_-_54864055_54864158	0.529564	Nkx3-1	ENSMUST00000142283.2|Homez|ENSMUSG00000057156.9|homeodomain leucine zipper-encoding gene
mm10_v2_chr9_-_122310921_122310936	0.527374	Nkx3-1	ENSMUST00000180685.1|Gm26797|ENSMUSG00000097572.1|predicted gene, 26797
mm10_v2_chr9_-_35570393_35570402	0.513628	Nkx3-1	ENSMUST00000115110.4|Hyls1|ENSMUSG00000050555.9|hydrolethalus syndrome 1
mm10_v2_chr1_-_75046639_75046639	0.499281	Nkx3-1	ENSMUST00000152855.1|Nhej1|ENSMUSG00000026162.6|nonhomologous end-joining factor 1
mm10_v2_chr9_-_43116514_43116572	0.487007	Nkx3-1	ENSMUST00000061833.4|Tmem136|ENSMUSG00000048503.6|transmembrane protein 136
mm10_v2_chr5_+_28071356_28071372	0.486411	Nkx3-1	ENSMUST00000059155.10|Insig1|ENSMUSG00000045294.10|insulin induced gene 1
mm10_v2_chr19_+_20601958_20601974	0.465338	Nkx3-1	ENSMUST00000087638.3|Aldh1a1|ENSMUSG00000053279.6|aldehyde dehydrogenase family 1, subfamily A1
mm10_v2_chr14_-_46831984_46832057	0.459585	Nkx3-1	ENSMUST00000181311.1|Gm10101|ENSMUSG00000061510.3|predicted gene 10101 	ENSMUST00000074862.2|Gm10101|ENSMUSG00000061510.3|predicted gene 10101
mm10_v2_chr3_+_14863495_14863538	0.455808	Nkx3-1	ENSMUST00000029076.4|Car3|ENSMUSG00000027559.4|carbonic anhydrase 3
mm10_v2_chr17_-_21933022_21933022	0.446095	Nkx3-1	ENSMUST00000074295.7|Zfp942|ENSMUSG00000071267.5|zinc finger protein 942
mm10_v2_chr1_+_135133272_135133336	0.443766	Nkx3-1	ENSMUST00000167080.1|Ptpn7|ENSMUSG00000031506.5|protein tyrosine phosphatase, non-receptor type 7
mm10_v2_chrX_-_100625901_100625954	0.434683	Nkx3-1	ENSMUST00000059099.6|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr16_+_20611585_20611635	0.422377	Nkx3-1	ENSMUST00000115522.2|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000119224.1|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000079600.4|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000120394.1|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2
mm10_v2_chr17_-_15564322_15564359	0.414059	Nkx3-1	ENSMUST00000147532.1|Prdm9|ENSMUSG00000051977.8|PR domain containing 9
mm10_v2_chr18_-_42262053_42262140	0.395545	Nkx3-1	ENSMUST00000097590.3|Lars|ENSMUSG00000024493.8|leucyl-tRNA synthetase
mm10_v2_chr8_-_23237623_23237681	0.388452	Nkx3-1	ENSMUST00000033950.5|Gins4|ENSMUSG00000031546.5|GINS complex subunit 4 (Sld5 homolog)
mm10_v2_chr14_-_104522615_104522707	0.374805	Nkx3-1	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr9_-_89092835_89092835	0.373788	Nkx3-1	ENSMUST00000167113.1|Trim43b|ENSMUSG00000079162.2|tripartite motif-containing 43B
mm10_v2_chr9_+_89199319_89199379	0.365923	Nkx3-1	ENSMUST00000138109.1|Mthfs|ENSMUSG00000066442.10|5, 10-methenyltetrahydrofolate synthetase
mm10_v2_chr14_-_52213379_52213379	0.364826	Nkx3-1	ENSMUST00000140603.1|Chd8|ENSMUSG00000053754.7|chromodomain helicase DNA binding protein 8
mm10_v2_chr17_-_65772686_65772752	0.362346	Nkx3-1	ENSMUST00000070673.7|Rab31|ENSMUSG00000056515.8|RAB31, member RAS oncogene family
mm10_v2_chr5_-_69592274_69592308	0.356318	Nkx3-1	ENSMUST00000174233.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000120789.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000166298.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2
mm10_v2_chr10_-_128211788_128211823	0.351421	Nkx3-1	ENSMUST00000061995.8|Spryd4|ENSMUSG00000051346.8|SPRY domain containing 4
mm10_v2_chr2_+_3114220_3114225	0.335888	Nkx3-1	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr4_+_33310306_33310387	0.331073	Nkx3-1	ENSMUST00000108153.2|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase 	ENSMUST00000029942.7|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase
mm10_v2_chrY_+_17874741_17874741	0.327795	Nkx3-1	ENSMUST00000177639.1|Gm20831|ENSMUSG00000094325.1|predicted gene, 20831
mm10_v2_chr8_-_95807458_95807471	0.31965	Nkx3-1	ENSMUST00000098473.4|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1 	ENSMUST00000068452.8|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1
mm10_v2_chr11_-_17008647_17008702	0.297563	Nkx3-1	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr18_-_12862624_12862714	0.293476	Nkx3-1	ENSMUST00000121808.1|Osbpl1a|ENSMUSG00000044252.11|oxysterol binding protein-like 1A 	ENSMUST00000118313.1|Osbpl1a|ENSMUSG00000044252.11|oxysterol binding protein-like 1A
mm10_v2_chr9_+_105053239_105053259	0.289885	Nkx3-1	ENSMUST00000035177.8|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3 	ENSMUST00000149243.1|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3
mm10_v2_chr17_-_35162969_35163040	0.280983	Nkx3-1	ENSMUST00000174805.1|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr2_+_62664279_62664300	0.280587	Nkx3-1	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr5_+_107597760_107597784	0.276583	Nkx3-1	ENSMUST00000112655.1|Rpap2|ENSMUSG00000033773.8|RNA polymerase II associated protein 2
mm10_v2_chr2_-_84715160_84715218	0.252961	Nkx3-1	ENSMUST00000035840.5|Zdhhc5|ENSMUSG00000034075.10|zinc finger, DHHC domain containing 5
mm10_v2_chrX_+_140456613_140456632	0.232945	Nkx3-1	ENSMUST00000033809.3|Prps1|ENSMUSG00000031432.3|phosphoribosyl pyrophosphate synthetase 1
mm10_v2_chr5_+_72914264_72914304	0.222985	Nkx3-1	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr9_+_40873981_40874127	0.216547	Nkx3-1	ENSMUST00000067375.3|Bsx|ENSMUSG00000054360.3|brain specific homeobox
mm10_v2_chr7_-_63938862_63938933	0.200199	Nkx3-1	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr7_+_100537052_100537139	0.193442	Nkx3-1	ENSMUST00000054310.3|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr2_-_155582656_155582668	0.173252	Nkx3-1	ENSMUST00000126322.1|Gss|ENSMUSG00000027610.11|glutathione synthetase
mm10_v2_chr6_-_108185552_108185587	0.1604	Nkx3-1	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr5_+_136919137_136919188	0.145136	Nkx3-1	ENSMUST00000181045.1|4933404O12Rik|ENSMUSG00000097908.1|RIKEN cDNA 4933404O12 gene
mm10_v2_chr19_-_59943000_59943100	0.13611	Nkx3-1	ENSMUST00000170819.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chrX_-_101222426_101222563	0.134989	Nkx3-1	ENSMUST00000120389.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000156473.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000077876.3|Snx12|ENSMUSG00000046032.10|sorting nexin 12
mm10_v2_chr12_+_17266545_17266601	0.132631	Nkx3-1	ENSMUST00000057288.5|Pdia6|ENSMUSG00000020571.6|protein disulfide isomerase associated 6
mm10_v2_chr6_+_88465409_88465482	0.126382	Nkx3-1	ENSMUST00000032165.9|Ruvbl1|ENSMUSG00000030079.9|RuvB-like protein 1
mm10_v2_chr7_-_35318408_35318440	0.116588	Nkx3-1	ENSMUST00000079693.5|Gpatch1|ENSMUSG00000063808.8|G patch domain containing 1
mm10_v2_chr12_-_87233556_87233556	0.102799	Nkx3-1	ENSMUST00000021423.7|Noxred1|ENSMUSG00000072919.3|NADP+ dependent oxidoreductase domain containing 1
mm10_v2_chr1_-_174921813_174921827	0.102709	Nkx3-1	ENSMUST00000055294.3|Grem2|ENSMUSG00000050069.3|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm10_v2_chr2_+_163994960_163994960	0.0949235	Nkx3-1	ENSMUST00000018470.3|Ywhab|ENSMUSG00000018326.3|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm10_v2_chr5_-_110046486_110046486	0.0810586	Nkx3-1	ENSMUST00000167969.1|Gm17655|ENSMUSG00000090963.1|predicted gene, 17655
mm10_v2_chr6_-_69284319_69284319	0.0682985	Nkx3-1	ENSMUST00000103349.1|Igkv4-69|ENSMUSG00000076548.1|immunoglobulin kappa variable 4-69
mm10_v2_chrX_+_7579666_7579693	0.0432963	Nkx3-1	ENSMUST00000115740.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3 	ENSMUST00000115739.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3
mm10_v2_chr7_+_100537192_100537232	0.0406949	Nkx3-1	ENSMUST00000120454.1|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr17_-_25942821_25942862	0.0220619	Nkx3-1	ENSMUST00000148382.1|Pigq|ENSMUSG00000025728.8|phosphatidylinositol glycan anchor biosynthesis, class Q 	ENSMUST00000145745.1|Pigq|ENSMUSG00000025728.8|phosphatidylinositol glycan anchor biosynthesis, class Q
mm10_v2_chr1_+_161142706_161142767	0.0212886	Nkx3-1	ENSMUST00000111608.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45 	ENSMUST00000052245.8|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr4_+_62619515_62619582	0.0045324	Nkx3-1	ENSMUST00000084521.4|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3 	ENSMUST00000107424.1|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3
