mm10_v2_chrX_+_7919816_7919905	19.9536	Rfx3_Rfx1_Rfx4	ENSMUST00000041096.3|Pcsk1n|ENSMUSG00000039278.10|proprotein convertase subtilisin/kexin type 1 inhibitor
mm10_v2_chr15_+_98167806_98167873	9.6776	Rfx3_Rfx1_Rfx4	ENSMUST00000031914.4|AI836003|ENSMUSG00000029875.4|expressed sequence AI836003
mm10_v2_chr7_+_99268338_99268388	8.36034	Rfx3_Rfx1_Rfx4	ENSMUST00000107100.2|Map6|ENSMUSG00000055407.7|microtubule-associated protein 6
mm10_v2_chr11_-_6606053_6606053	7.38418	Rfx3_Rfx1_Rfx4	ENSMUST00000045713.3|Nacad|ENSMUSG00000041073.4|NAC alpha domain containing
mm10_v2_chr7_-_140082246_140082301	7.35652	Rfx3_Rfx1_Rfx4	ENSMUST00000166758.2|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr9_+_59589288_59589353	6.70578	Rfx3_Rfx1_Rfx4	ENSMUST00000121266.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000118164.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr7_-_140082489_140082556	6.61813	Rfx3_Rfx1_Rfx4	ENSMUST00000026541.7|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr7_-_4546567_4546567	6.21305	Rfx3_Rfx1_Rfx4	ENSMUST00000065957.5|Syt5|ENSMUSG00000004961.6|synaptotagmin V
mm10_v2_chr19_-_46327121_46327156	5.90995	Rfx3_Rfx1_Rfx4	ENSMUST00000041391.4|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing 	ENSMUST00000096029.5|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing
mm10_v2_chr10_-_81472859_81473127	5.76462	Rfx3_Rfx1_Rfx4	ENSMUST00000147524.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5 	ENSMUST00000119060.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5
mm10_v2_chr10_+_80295930_80296003	5.74495	Rfx3_Rfx1_Rfx4	ENSMUST00000105359.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr5_+_30814571_30814641	5.43068	Rfx3_Rfx1_Rfx4	ENSMUST00000031058.8|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr17_+_34629533_34629620	5.37689	Rfx3_Rfx1_Rfx4	ENSMUST00000015620.6|Prrt1|ENSMUSG00000015476.6|proline-rich transmembrane protein 1
mm10_v2_chr17_+_46254017_46254165	5.35503	Rfx3_Rfx1_Rfx4	ENSMUST00000095262.4|Lrrc73|ENSMUSG00000071073.4|leucine rich repeat containing 73
mm10_v2_chr7_+_45785331_45785390	5.18331	Rfx3_Rfx1_Rfx4	ENSMUST00000120005.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000123585.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr5_+_30814722_30814776	5.04451	Rfx3_Rfx1_Rfx4	ENSMUST00000114724.1|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr12_-_84148449_84148499	4.80907	Rfx3_Rfx1_Rfx4	ENSMUST00000061425.2|Pnma1|ENSMUSG00000054383.2|paraneoplastic antigen MA1
mm10_v2_chr5_+_24985840_24985862	4.63521	Rfx3_Rfx1_Rfx4	ENSMUST00000075081.6|1500035N22Rik|ENSMUSG00000059631.6|RIKEN cDNA 1500035N22 gene
mm10_v2_chr3_+_13946368_13946379	4.60855	Rfx3_Rfx1_Rfx4	ENSMUST00000171075.1|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like 	ENSMUST00000108372.2|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like
mm10_v2_chr4_-_119415494_119415522	4.58506	Rfx3_Rfx1_Rfx4	ENSMUST00000063642.2|Ccdc30|ENSMUSG00000028637.9|coiled-coil domain containing 30
mm10_v2_chr17_-_34972124_34972158	4.57999	Rfx3_Rfx1_Rfx4	ENSMUST00000087328.2|Hspa1a|ENSMUSG00000091971.2|heat shock protein 1A 	ENSMUST00000179128.1|Hspa1a|ENSMUSG00000091971.2|heat shock protein 1A
mm10_v2_chr4_+_152338887_152338967	4.52805	Rfx3_Rfx1_Rfx4	ENSMUST00000005175.4|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr4_+_152338619_152338709	4.52744	Rfx3_Rfx1_Rfx4	ENSMUST00000030775.5|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5 	ENSMUST00000164662.1|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr11_+_70029742_70029837	4.4275	Rfx3_Rfx1_Rfx4	ENSMUST00000132597.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr1_-_60043087_60043175	4.41003	Rfx3_Rfx1_Rfx4	ENSMUST00000027172.6|Ica1l|ENSMUSG00000026018.6|islet cell autoantigen 1-like
mm10_v2_chr10_+_34297421_34297513	4.21259	Rfx3_Rfx1_Rfx4	ENSMUST00000047935.6|Tspyl4|ENSMUSG00000039485.6|TSPY-like 4
mm10_v2_chr4_+_137681663_137681719	4.14159	Rfx3_Rfx1_Rfx4	ENSMUST00000047243.5|Rap1gap|ENSMUSG00000041351.10|Rap1 GTPase-activating protein
mm10_v2_chr12_+_29528382_29528468	4.09101	Rfx3_Rfx1_Rfx4	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr11_-_61453992_61454106	4.05072	Rfx3_Rfx1_Rfx4	ENSMUST00000060255.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000054927.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000102661.3|Rnf112|ENSMUSG00000010086.11|ring finger protein 112
mm10_v2_chr7_+_16944645_16944720	4.01724	Rfx3_Rfx1_Rfx4	ENSMUST00000094807.5|Pnmal2|ENSMUSG00000070802.5|PNMA-like 2
mm10_v2_chr13_+_55464237_55464319	3.79576	Rfx3_Rfx1_Rfx4	ENSMUST00000046533.7|Prr7|ENSMUSG00000034686.7|proline rich 7 (synaptic)
mm10_v2_chr19_-_57197435_57197460	3.74465	Rfx3_Rfx1_Rfx4	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr7_+_16959714_16959800	3.73676	Rfx3_Rfx1_Rfx4	ENSMUST00000038163.6|Pnmal1|ENSMUSG00000041141.6|PNMA-like 1
mm10_v2_chr5_+_30711564_30711586	3.72933	Rfx3_Rfx1_Rfx4	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr8_-_95142477_95142577	3.71162	Rfx3_Rfx1_Rfx4	ENSMUST00000034240.7|Kifc3|ENSMUSG00000031788.7|kinesin family member C3 	ENSMUST00000169748.1|Kifc3|ENSMUSG00000031788.7|kinesin family member C3
mm10_v2_chr7_-_31051431_31051488	3.61699	Rfx3_Rfx1_Rfx4	ENSMUST00000073892.4|Fxyd7|ENSMUSG00000036578.6|FXYD domain-containing ion transport regulator 7
mm10_v2_chr5_+_30711849_30711905	3.6098	Rfx3_Rfx1_Rfx4	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr12_-_83439910_83439934	3.59364	Rfx3_Rfx1_Rfx4	ENSMUST00000177801.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr5_-_103211251_103211334	3.59035	Rfx3_Rfx1_Rfx4	ENSMUST00000060871.5|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112846.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000170792.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112847.2|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr15_+_82256023_82256130	3.56472	Rfx3_Rfx1_Rfx4	ENSMUST00000143238.1|1500009C09Rik|ENSMUSG00000068099.4|RIKEN cDNA 1500009C09 gene
mm10_v2_chr19_-_57197496_57197536	3.54395	Rfx3_Rfx1_Rfx4	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr19_-_57197377_57197417	3.53767	Rfx3_Rfx1_Rfx4	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr5_-_136170634_136170661	3.48361	Rfx3_Rfx1_Rfx4	ENSMUST00000041048.1|Orai2|ENSMUSG00000039747.7|ORAI calcium release-activated calcium modulator 2
mm10_v2_chr5_-_115652974_115652992	3.48267	Rfx3_Rfx1_Rfx4	ENSMUST00000121746.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64 	ENSMUST00000118576.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64
mm10_v2_chr5_+_33983534_33983548	3.40894	Rfx3_Rfx1_Rfx4	ENSMUST00000114382.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chr15_-_33687840_33687883	3.37311	Rfx3_Rfx1_Rfx4	ENSMUST00000042021.3|Tspyl5|ENSMUSG00000038984.3|testis-specific protein, Y-encoded-like 5
mm10_v2_chr5_+_33983437_33983529	3.35789	Rfx3_Rfx1_Rfx4	ENSMUST00000114384.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000094869.5|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000114383.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chr18_-_31949571_31949636	3.331	Rfx3_Rfx1_Rfx4	ENSMUST00000064016.5|Gpr17|ENSMUSG00000052229.5|G protein-coupled receptor 17
mm10_v2_chr16_-_43979050_43979093	3.31473	Rfx3_Rfx1_Rfx4	ENSMUST00000165648.1|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23 	ENSMUST00000036321.7|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23
mm10_v2_chr3_-_89245159_89245199	3.22671	Rfx3_Rfx1_Rfx4	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr10_+_106470281_106470367	3.22601	Rfx3_Rfx1_Rfx4	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr10_+_80299084_80299126	3.20468	Rfx3_Rfx1_Rfx4	ENSMUST00000154212.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr13_+_43615710_43615788	3.20421	Rfx3_Rfx1_Rfx4	ENSMUST00000059986.2|Rnf182|ENSMUSG00000044164.2|ring finger protein 182
mm10_v2_chr3_+_29082539_29082771	3.19206	Rfx3_Rfx1_Rfx4	ENSMUST00000119598.1|Egfem1|ENSMUSG00000063600.8|EGF-like and EMI domain containing 1 	ENSMUST00000118531.1|Egfem1|ENSMUSG00000063600.8|EGF-like and EMI domain containing 1
mm10_v2_chr15_+_54745702_54745702	3.17276	Rfx3_Rfx1_Rfx4	ENSMUST00000050027.8|Nov|ENSMUSG00000037362.8|nephroblastoma overexpressed gene
mm10_v2_chr19_-_57197556_57197631	3.1561	Rfx3_Rfx1_Rfx4	ENSMUST00000099294.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr13_-_92483996_92484037	3.13848	Rfx3_Rfx1_Rfx4	ENSMUST00000040106.7|Fam151b|ENSMUSG00000034334.7|family with sequence similarity 151, member B
mm10_v2_chr3_-_88458876_88459043	3.08277	Rfx3_Rfx1_Rfx4	ENSMUST00000147200.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000169222.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr3_-_89245005_89245031	3.07931	Rfx3_Rfx1_Rfx4	ENSMUST00000107464.1|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr8_-_106337987_106337996	3.06762	Rfx3_Rfx1_Rfx4	ENSMUST00000067512.7|Smpd3|ENSMUSG00000031906.8|sphingomyelin phosphodiesterase 3, neutral
mm10_v2_chr1_+_66386968_66386999	3.03082	Rfx3_Rfx1_Rfx4	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr16_-_3909192_3909192	2.99987	Rfx3_Rfx1_Rfx4	ENSMUST00000181699.1|1700016D08Rik|ENSMUSG00000097179.1|RIKEN cDNA 1700016D08 gene
mm10_v2_chr18_+_23803962_23804054	2.97806	Rfx3_Rfx1_Rfx4	ENSMUST00000025127.3|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr7_+_44428938_44429018	2.95459	Rfx3_Rfx1_Rfx4	ENSMUST00000127790.1|Lrrc4b|ENSMUSG00000047085.8|leucine rich repeat containing 4B
mm10_v2_chr7_+_126950518_126950584	2.88273	Rfx3_Rfx1_Rfx4	ENSMUST00000106335.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2 	ENSMUST00000146017.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr7_+_3390629_3390707	2.85568	Rfx3_Rfx1_Rfx4	ENSMUST00000182222.1|Cacng8|ENSMUSG00000053395.9|calcium channel, voltage-dependent, gamma subunit 8
mm10_v2_chr9_-_60688118_60688184	2.85131	Rfx3_Rfx1_Rfx4	ENSMUST00000114034.2|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000065603.5|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr10_-_13868779_13868874	2.83808	Rfx3_Rfx1_Rfx4	ENSMUST00000105534.3|Aig1|ENSMUSG00000019806.7|androgen-induced 1
mm10_v2_chr9_-_106685653_106685674	2.80862	Rfx3_Rfx1_Rfx4	ENSMUST00000163441.1|Tex264|ENSMUSG00000040813.9|testis expressed gene 264
mm10_v2_chr9_-_106685892_106685961	2.77529	Rfx3_Rfx1_Rfx4	ENSMUST00000169068.1|Tex264|ENSMUSG00000040813.9|testis expressed gene 264 	ENSMUST00000046735.4|Tex264|ENSMUSG00000040813.9|testis expressed gene 264
mm10_v2_chr8_-_22805596_22805654	2.76329	Rfx3_Rfx1_Rfx4	ENSMUST00000163739.1|Ap3m2|ENSMUSG00000031539.5|adaptor-related protein complex 3, mu 2 subunit
mm10_v2_chr3_-_88459047_88459101	2.66116	Rfx3_Rfx1_Rfx4	ENSMUST00000165898.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000127436.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr10_-_13868932_13869004	2.63098	Rfx3_Rfx1_Rfx4	ENSMUST00000019942.5|Aig1|ENSMUSG00000019806.7|androgen-induced 1 	ENSMUST00000162610.1|Aig1|ENSMUSG00000019806.7|androgen-induced 1
mm10_v2_chr2_-_75938407_75938462	2.62298	Rfx3_Rfx1_Rfx4	ENSMUST00000099996.3|Ttc30b|ENSMUSG00000075273.3|tetratricopeptide repeat domain 30B
mm10_v2_chr1_-_133753681_133753857	2.60621	Rfx3_Rfx1_Rfx4	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr15_-_79062866_79062941	2.59786	Rfx3_Rfx1_Rfx4	ENSMUST00000151889.1|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54 	ENSMUST00000040676.4|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54
mm10_v2_chr11_+_43474276_43474340	2.57166	Rfx3_Rfx1_Rfx4	ENSMUST00000173002.1|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2 	ENSMUST00000057679.3|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2
mm10_v2_chr5_-_92042630_92042701	2.57017	Rfx3_Rfx1_Rfx4	ENSMUST00000113140.1|Cdkl2|ENSMUSG00000029403.8|cyclin-dependent kinase-like 2 (CDC2-related kinase) 	ENSMUST00000113143.1|Cdkl2|ENSMUSG00000029403.8|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm10_v2_chr15_-_79141197_79141268	2.56329	Rfx3_Rfx1_Rfx4	ENSMUST00000169604.1|1700088E04Rik|ENSMUSG00000033029.6|RIKEN cDNA 1700088E04 gene
mm10_v2_chr11_-_71033462_71033513	2.56215	Rfx3_Rfx1_Rfx4	ENSMUST00000156068.2|6330403K07Rik|ENSMUSG00000018451.6|RIKEN cDNA 6330403K07 gene
mm10_v2_chr7_+_126950687_126950729	2.55103	Rfx3_Rfx1_Rfx4	ENSMUST00000106333.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr2_-_30048827_30048891	2.54576	Rfx3_Rfx1_Rfx4	ENSMUST00000113711.2|Wdr34|ENSMUSG00000039715.8|WD repeat domain 34
mm10_v2_chr15_-_98953541_98953560	2.53817	Rfx3_Rfx1_Rfx4	ENSMUST00000097014.5|Tuba1a|ENSMUSG00000072235.5|tubulin, alpha 1A
mm10_v2_chr5_-_142550965_142551110	2.493	Rfx3_Rfx1_Rfx4	ENSMUST00000129212.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000110785.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000063635.8|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr7_+_126950837_126950966	2.4627	Rfx3_Rfx1_Rfx4	ENSMUST00000106332.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr13_+_42681513_42681564	2.43742	Rfx3_Rfx1_Rfx4	ENSMUST00000149235.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr7_+_133776857_133776942	2.4202	Rfx3_Rfx1_Rfx4	ENSMUST00000065359.5|Fank1|ENSMUSG00000053111.6|fibronectin type 3 and ankyrin repeat domains 1 	ENSMUST00000151031.1|Fank1|ENSMUSG00000053111.6|fibronectin type 3 and ankyrin repeat domains 1 	ENSMUST00000121560.1|Fank1|ENSMUSG00000053111.6|fibronectin type 3 and ankyrin repeat domains 1
mm10_v2_chr3_-_108536466_108536536	2.41696	Rfx3_Rfx1_Rfx4	ENSMUST00000048012.6|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106626.2|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106625.3|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene
mm10_v2_chrX_+_36195938_36195946	2.41271	Rfx3_Rfx1_Rfx4	ENSMUST00000048067.3|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr11_-_74897052_74897094	2.40983	Rfx3_Rfx1_Rfx4	ENSMUST00000057631.5|Sgsm2|ENSMUSG00000038351.8|small G protein signaling modulator 2 	ENSMUST00000081799.5|Sgsm2|ENSMUSG00000038351.8|small G protein signaling modulator 2
mm10_v2_chr17_-_85090204_85090275	2.3888	Rfx3_Rfx1_Rfx4	ENSMUST00000072406.3|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like 	ENSMUST00000171795.1|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like
mm10_v2_chrX_+_36195950_36195959	2.38299	Rfx3_Rfx1_Rfx4	ENSMUST00000115257.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr11_+_87760533_87760587	2.37833	Rfx3_Rfx1_Rfx4	ENSMUST00000039627.5|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1 	ENSMUST00000100644.3|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1
mm10_v2_chr18_-_78206408_78206440	2.37618	Rfx3_Rfx1_Rfx4	ENSMUST00000163367.1|Slc14a2|ENSMUSG00000024552.9|solute carrier family 14 (urea transporter), member 2
mm10_v2_chrX_+_36195904_36195932	2.34954	Rfx3_Rfx1_Rfx4	ENSMUST00000115258.2|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr8_-_123212742_123212779	2.33668	Rfx3_Rfx1_Rfx4	ENSMUST00000000759.8|Chmp1a|ENSMUSG00000000743.8|charged multivesicular body protein 1A
mm10_v2_chr10_-_79874233_79874439	2.31471	Rfx3_Rfx1_Rfx4	ENSMUST00000166023.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000167707.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000165601.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764
mm10_v2_chr7_+_19176416_19176440	2.25928	Rfx3_Rfx1_Rfx4	ENSMUST00000117338.1|Eml2|ENSMUSG00000040811.9|echinoderm microtubule associated protein like 2
mm10_v2_chr15_+_89532816_89532890	2.25162	Rfx3_Rfx1_Rfx4	ENSMUST00000167173.1|Shank3|ENSMUSG00000022623.9|SH3/ankyrin domain gene 3
mm10_v2_chr9_-_124424154_124424154	2.24927	Rfx3_Rfx1_Rfx4	ENSMUST00000180270.1|Ppp2r3d|ENSMUSG00000093803.1|protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta
mm10_v2_chr7_+_139894696_139894854	2.19235	Rfx3_Rfx1_Rfx4	ENSMUST00000151421.1|Kndc1|ENSMUSG00000066129.8|kinase non-catalytic C-lobe domain (KIND) containing 1 	ENSMUST00000053445.9|Kndc1|ENSMUSG00000066129.8|kinase non-catalytic C-lobe domain (KIND) containing 1 	ENSMUST00000121839.1|Kndc1|ENSMUSG00000066129.8|kinase non-catalytic C-lobe domain (KIND) containing 1
mm10_v2_chr9_+_59578192_59578337	2.17499	Rfx3_Rfx1_Rfx4	ENSMUST00000118549.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000034840.3|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chrX_+_36195968_36195993	2.17341	Rfx3_Rfx1_Rfx4	ENSMUST00000115256.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr8_-_119575143_119575205	2.16932	Rfx3_Rfx1_Rfx4	ENSMUST00000036049.4|Hsdl1|ENSMUSG00000034189.4|hydroxysteroid dehydrogenase like 1
mm10_v2_chr9_-_29412204_29412277	2.16657	Rfx3_Rfx1_Rfx4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr19_-_10304867_10304954	2.15424	Rfx3_Rfx1_Rfx4	ENSMUST00000039327.4|Dagla|ENSMUSG00000035735.4|diacylglycerol lipase, alpha
mm10_v2_chr3_+_118433797_118433966	2.12071	Rfx3_Rfx1_Rfx4	ENSMUST00000180593.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181926.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181060.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181310.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871
mm10_v2_chr2_+_32629467_32629514	2.09539	Rfx3_Rfx1_Rfx4	ENSMUST00000068271.4|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr4_+_117550326_117550409	2.09223	Rfx3_Rfx1_Rfx4	ENSMUST00000037127.8|Eri3|ENSMUSG00000033423.10|exoribonuclease 3
mm10_v2_chr17_-_46144156_46144218	2.06775	Rfx3_Rfx1_Rfx4	ENSMUST00000024762.2|Rsph9|ENSMUSG00000023966.2|radial spoke head 9 homolog (Chlamydomonas)
mm10_v2_chr4_+_123183456_123183601	2.06743	Rfx3_Rfx1_Rfx4	ENSMUST00000126995.1|Hpcal4|ENSMUSG00000046093.3|hippocalcin-like 4
mm10_v2_chrX_-_8132770_8132857	2.05668	Rfx3_Rfx1_Rfx4	ENSMUST00000130832.1|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13 	ENSMUST00000033506.6|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13 	ENSMUST00000115623.1|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13 	ENSMUST00000153839.1|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13
mm10_v2_chr7_+_3303643_3303654	2.03354	Rfx3_Rfx1_Rfx4	ENSMUST00000172109.1|Prkcg|ENSMUSG00000078816.3|protein kinase C, gamma
mm10_v2_chr11_-_105944412_105944518	2.03048	Rfx3_Rfx1_Rfx4	ENSMUST00000019734.4|Cyb561|ENSMUSG00000019590.10|cytochrome b-561 	ENSMUST00000184269.1|Cyb561|ENSMUSG00000019590.10|cytochrome b-561 	ENSMUST00000150563.1|Cyb561|ENSMUSG00000019590.10|cytochrome b-561
mm10_v2_chr1_-_133801031_133801041	2.03032	Rfx3_Rfx1_Rfx4	ENSMUST00000143567.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr15_+_100761741_100761797	2.01104	Rfx3_Rfx1_Rfx4	ENSMUST00000023776.6|Slc4a8|ENSMUSG00000023032.6|solute carrier family 4 (anion exchanger), member 8
mm10_v2_chr1_+_165461037_165461037	2.00347	Rfx3_Rfx1_Rfx4	ENSMUST00000027853.5|Mpc2|ENSMUSG00000026568.5|mitochondrial pyruvate carrier 2
mm10_v2_chr2_-_36049365_36049406	1.99177	Rfx3_Rfx1_Rfx4	ENSMUST00000070112.5|Ndufa8|ENSMUSG00000026895.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8
mm10_v2_chr9_+_107547288_107547379	1.98114	Rfx3_Rfx1_Rfx4	ENSMUST00000010188.7|Zmynd10|ENSMUSG00000010044.7|zinc finger, MYND domain containing 10
mm10_v2_chr7_+_3303503_3303565	1.97657	Rfx3_Rfx1_Rfx4	ENSMUST00000100301.4|Prkcg|ENSMUSG00000078816.3|protein kinase C, gamma
mm10_v2_chr4_+_43669266_43669287	1.96506	Rfx3_Rfx1_Rfx4	ENSMUST00000107864.1|Tmem8b|ENSMUSG00000078716.3|transmembrane protein 8B
mm10_v2_chr10_-_81060134_81060204	1.9619	Rfx3_Rfx1_Rfx4	ENSMUST00000005067.5|Sgta|ENSMUSG00000004937.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm10_v2_chr17_+_27685197_27685233	1.9613	Rfx3_Rfx1_Rfx4	ENSMUST00000097360.2|Pacsin1|ENSMUSG00000040276.8|protein kinase C and casein kinase substrate in neurons 1
mm10_v2_chr7_-_13054665_13054764	1.9597	Rfx3_Rfx1_Rfx4	ENSMUST00000182515.1|Mzf1|ENSMUSG00000030380.10|myeloid zinc finger 1 	ENSMUST00000069289.8|Mzf1|ENSMUSG00000030380.10|myeloid zinc finger 1
mm10_v2_chr12_-_69790660_69790735	1.93966	Rfx3_Rfx1_Rfx4	ENSMUST00000021377.4|Cdkl1|ENSMUSG00000020990.4|cyclin-dependent kinase-like 1 (CDC2-related kinase)
mm10_v2_chr7_+_16738410_16738476	1.93694	Rfx3_Rfx1_Rfx4	ENSMUST00000086112.6|Ap2s1|ENSMUSG00000008036.10|adaptor-related protein complex 2, sigma 1 subunit
mm10_v2_chr15_-_84557776_84557875	1.92781	Rfx3_Rfx1_Rfx4	ENSMUST00000069476.4|Ldoc1l|ENSMUSG00000055745.4|leucine zipper, down-regulated in cancer 1-like
mm10_v2_chr3_-_84305385_84305456	1.89752	Rfx3_Rfx1_Rfx4	ENSMUST00000122849.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2 	ENSMUST00000132283.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr17_-_25837082_25837295	1.88547	Rfx3_Rfx1_Rfx4	ENSMUST00000183929.1|Rhbdl1|ENSMUSG00000025735.7|rhomboid, veinlet-like 1 (Drosophila) 	ENSMUST00000184865.1|Rhbdl1|ENSMUSG00000025735.7|rhomboid, veinlet-like 1 (Drosophila) 	ENSMUST00000026831.7|Rhbdl1|ENSMUSG00000025735.7|rhomboid, veinlet-like 1 (Drosophila)
mm10_v2_chr6_-_77979652_77979708	1.88294	Rfx3_Rfx1_Rfx4	ENSMUST00000161846.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000160894.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2
mm10_v2_chrX_+_136993147_136993216	1.86796	Rfx3_Rfx1_Rfx4	ENSMUST00000113067.1|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18 	ENSMUST00000101227.2|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18
mm10_v2_chr8_-_84104773_84104793	1.85486	Rfx3_Rfx1_Rfx4	ENSMUST00000041367.7|Dcaf15|ENSMUSG00000037103.7|DDB1 and CUL4 associated factor 15
mm10_v2_chr7_+_6172482_6172531	1.84995	Rfx3_Rfx1_Rfx4	ENSMUST00000108567.1|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444 	ENSMUST00000054680.5|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444 	ENSMUST00000108566.1|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444
mm10_v2_chr7_+_16816299_16816361	1.8344	Rfx3_Rfx1_Rfx4	ENSMUST00000108495.2|Strn4|ENSMUSG00000030374.9|striatin, calmodulin binding protein 4
mm10_v2_chr5_+_120431770_120431905	1.82419	Rfx3_Rfx1_Rfx4	ENSMUST00000031591.7|Lhx5|ENSMUSG00000029595.7|LIM homeobox protein 5
mm10_v2_chr2_+_164460945_164461018	1.82203	Rfx3_Rfx1_Rfx4	ENSMUST00000072452.4|Sys1|ENSMUSG00000045503.10|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm10_v2_chr2_-_25580099_25580099	1.81421	Rfx3_Rfx1_Rfx4	ENSMUST00000114217.1|Gm996|ENSMUSG00000029419.7|predicted gene 996
mm10_v2_chr10_+_81574699_81574739	1.80847	Rfx3_Rfx1_Rfx4	ENSMUST00000131794.1|Tle2|ENSMUSG00000034771.9|transducin-like enhancer of split 2, homolog of Drosophila E(spl) 	ENSMUST00000136341.1|Tle2|ENSMUSG00000034771.9|transducin-like enhancer of split 2, homolog of Drosophila E(spl)
mm10_v2_chr9_-_110476637_110476694	1.78517	Rfx3_Rfx1_Rfx4	ENSMUST00000111934.1|Klhl18|ENSMUSG00000054792.9|kelch-like 18 	ENSMUST00000068025.6|Klhl18|ENSMUSG00000054792.9|kelch-like 18
mm10_v2_chr4_-_155669171_155669231	1.72303	Rfx3_Rfx1_Rfx4	ENSMUST00000103176.3|Mib2|ENSMUSG00000029060.11|mindbomb homolog 2 (Drosophila)
mm10_v2_chr1_-_87510306_87510373	1.72202	Rfx3_Rfx1_Rfx4	ENSMUST00000027477.8|Ngef|ENSMUSG00000026259.8|neuronal guanine nucleotide exchange factor
mm10_v2_chr6_+_34780836_34780905	1.70443	Rfx3_Rfx1_Rfx4	ENSMUST00000115012.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3 	ENSMUST00000115014.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3 	ENSMUST00000115009.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3
mm10_v2_chr16_-_3908596_3908623	1.68745	Rfx3_Rfx1_Rfx4	ENSMUST00000123235.2|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr17_-_34836869_34836959	1.68186	Rfx3_Rfx1_Rfx4	ENSMUST00000077477.5|Stk19|ENSMUSG00000061207.5|serine/threonine kinase 19
mm10_v2_chr12_+_113140198_113140257	1.68122	Rfx3_Rfx1_Rfx4	ENSMUST00000084882.4|Crip2|ENSMUSG00000006356.6|cysteine rich protein 2
mm10_v2_chr17_-_80290476_80290476	1.67802	Rfx3_Rfx1_Rfx4	ENSMUST00000086555.3|Dhx57|ENSMUSG00000035051.8|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 	ENSMUST00000038166.7|Dhx57|ENSMUSG00000035051.8|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm10_v2_chr11_+_83302641_83302803	1.66161	Rfx3_Rfx1_Rfx4	ENSMUST00000176430.1|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit 	ENSMUST00000065692.7|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit
mm10_v2_chr8_+_66386292_66386308	1.66123	Rfx3_Rfx1_Rfx4	ENSMUST00000039540.5|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110253.2|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr5_-_137531204_137531297	1.65954	Rfx3_Rfx1_Rfx4	ENSMUST00000150063.2|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr1_+_152766540_152766551	1.6533	Rfx3_Rfx1_Rfx4	ENSMUST00000077755.5|Arpc5|ENSMUSG00000008475.7|actin related protein 2/3 complex, subunit 5 	ENSMUST00000097536.4|Arpc5|ENSMUSG00000008475.7|actin related protein 2/3 complex, subunit 5
mm10_v2_chr5_-_114813943_114813976	1.65194	Rfx3_Rfx1_Rfx4	ENSMUST00000061251.5|1500011B03Rik|ENSMUSG00000072694.7|RIKEN cDNA 1500011B03 gene 	ENSMUST00000112160.3|1500011B03Rik|ENSMUSG00000072694.7|RIKEN cDNA 1500011B03 gene
mm10_v2_chr8_+_85060055_85060135	1.65029	Rfx3_Rfx1_Rfx4	ENSMUST00000095220.3|Fbxw9|ENSMUSG00000008167.8|F-box and WD-40 domain protein 9
mm10_v2_chr2_+_71981184_71981287	1.61753	Rfx3_Rfx1_Rfx4	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr5_+_138171997_138172021	1.60364	Rfx3_Rfx1_Rfx4	ENSMUST00000019662.4|Ap4m1|ENSMUSG00000019518.4|adaptor-related protein complex AP-4, mu 1 	ENSMUST00000151318.1|Ap4m1|ENSMUSG00000019518.4|adaptor-related protein complex AP-4, mu 1
mm10_v2_chr1_+_172521044_172521181	1.5918	Rfx3_Rfx1_Rfx4	ENSMUST00000085894.5|Ccdc19|ENSMUSG00000026546.10|coiled-coil domain containing 19 	ENSMUST00000161140.1|Ccdc19|ENSMUSG00000026546.10|coiled-coil domain containing 19 	ENSMUST00000162988.1|Ccdc19|ENSMUSG00000026546.10|coiled-coil domain containing 19
mm10_v2_chr2_+_118663235_118663309	1.58702	Rfx3_Rfx1_Rfx4	ENSMUST00000099557.3|Pak6|ENSMUSG00000074923.4|p21 protein (Cdc42/Rac)-activated kinase 6
mm10_v2_chr7_-_127588595_127588595	1.58591	Rfx3_Rfx1_Rfx4	ENSMUST00000072155.3|Gm166|ENSMUSG00000057176.3|predicted gene 166
mm10_v2_chr16_-_16829276_16829349	1.5787	Rfx3_Rfx1_Rfx4	ENSMUST00000023468.5|Spag6|ENSMUSG00000022783.5|sperm associated antigen 6
mm10_v2_chr7_-_126922887_126922926	1.57542	Rfx3_Rfx1_Rfx4	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr3_+_95134088_95134088	1.57395	Rfx3_Rfx1_Rfx4	ENSMUST00000066386.5|Lysmd1|ENSMUSG00000053769.5|LysM, putative peptidoglycan-binding, domain containing 1
mm10_v2_chr17_+_46248069_46248139	1.5723	Rfx3_Rfx1_Rfx4	ENSMUST00000095263.3|Yipf3|ENSMUSG00000071074.3|Yip1 domain family, member 3 	ENSMUST00000123311.1|Yipf3|ENSMUSG00000071074.3|Yip1 domain family, member 3
mm10_v2_chr19_-_28967794_28967852	1.56681	Rfx3_Rfx1_Rfx4	ENSMUST00000162110.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr13_+_43615950_43615991	1.55444	Rfx3_Rfx1_Rfx4	ENSMUST00000161817.1|Rnf182|ENSMUSG00000044164.2|ring finger protein 182
mm10_v2_chrX_+_136993281_136993308	1.54868	Rfx3_Rfx1_Rfx4	ENSMUST00000033804.4|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18
mm10_v2_chr13_+_91461050_91461125	1.54859	Rfx3_Rfx1_Rfx4	ENSMUST00000004094.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2 	ENSMUST00000042122.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2
mm10_v2_chr9_+_20652107_20652138	1.54297	Rfx3_Rfx1_Rfx4	ENSMUST00000034689.6|Pin1|ENSMUSG00000032171.6|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
mm10_v2_chr8_-_92356103_92356120	1.51951	Rfx3_Rfx1_Rfx4	ENSMUST00000034183.3|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene
mm10_v2_chr5_+_29195983_29196032	1.50178	Rfx3_Rfx1_Rfx4	ENSMUST00000160888.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000159272.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000001247.5|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000161398.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000160246.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32
mm10_v2_chr3_-_127225847_127225915	1.50145	Rfx3_Rfx1_Rfx4	ENSMUST00000182726.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182779.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr19_+_47178820_47178997	1.49638	Rfx3_Rfx1_Rfx4	ENSMUST00000111808.3|Neurl1a|ENSMUSG00000006435.9|neuralized homolog 1A (Drosophila)
mm10_v2_chr19_+_6276725_6276792	1.47334	Rfx3_Rfx1_Rfx4	ENSMUST00000025684.3|Ehd1|ENSMUSG00000024772.9|EH-domain containing 1
mm10_v2_chr11_+_83302817_83302952	1.47194	Rfx3_Rfx1_Rfx4	ENSMUST00000142680.1|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit
mm10_v2_chr9_+_108569885_108569943	1.45401	Rfx3_Rfx1_Rfx4	ENSMUST00000019183.8|Dalrd3|ENSMUSG00000019039.8|DALR anticodon binding domain containing 3
mm10_v2_chr3_+_82358056_82358075	1.4467	Rfx3_Rfx1_Rfx4	ENSMUST00000091014.4|Map9|ENSMUSG00000033900.8|microtubule-associated protein 9
mm10_v2_chr13_+_24845122_24845186	1.43544	Rfx3_Rfx1_Rfx4	ENSMUST00000006893.8|D130043K22Rik|ENSMUSG00000006711.9|RIKEN cDNA D130043K22 gene
mm10_v2_chr8_+_123235086_123235096	1.43088	Rfx3_Rfx1_Rfx4	ENSMUST00000181432.1|4933417D19Rik|ENSMUSG00000097637.1|RIKEN cDNA 4933417D19 gene
mm10_v2_chr17_+_88530113_88530142	1.42101	Rfx3_Rfx1_Rfx4	ENSMUST00000038551.6|Ppp1r21|ENSMUSG00000034709.7|protein phosphatase 1, regulatory subunit 21
mm10_v2_chr19_+_10001669_10001703	1.41676	Rfx3_Rfx1_Rfx4	ENSMUST00000121418.1|Rab3il1|ENSMUSG00000024663.11|RAB3A interacting protein (rabin3)-like 1
mm10_v2_chr8_-_92355764_92355891	1.4149	Rfx3_Rfx1_Rfx4	ENSMUST00000180102.1|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene 	ENSMUST00000179421.1|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene 	ENSMUST00000179222.1|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene 	ENSMUST00000179029.1|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene
mm10_v2_chrX_-_140062550_140062583	1.40778	Rfx3_Rfx1_Rfx4	ENSMUST00000124075.1|Nup62cl|ENSMUSG00000072944.5|nucleoporin 62 C-terminal like 	ENSMUST00000101212.2|Nup62cl|ENSMUSG00000072944.5|nucleoporin 62 C-terminal like 	ENSMUST00000125678.2|Nup62cl|ENSMUSG00000072944.5|nucleoporin 62 C-terminal like
mm10_v2_chr9_+_63602650_63602703	1.39687	Rfx3_Rfx1_Rfx4	ENSMUST00000041551.7|Aagab|ENSMUSG00000037257.7|alpha- and gamma-adaptin binding protein
mm10_v2_chr7_-_44929410_44929521	1.38877	Rfx3_Rfx1_Rfx4	ENSMUST00000107857.3|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000085399.6|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000167930.1|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000166972.1|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit
mm10_v2_chr6_+_34780412_34780467	1.38863	Rfx3_Rfx1_Rfx4	ENSMUST00000115016.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3 	ENSMUST00000115017.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3
mm10_v2_chr7_+_127588698_127588725	1.38823	Rfx3_Rfx1_Rfx4	ENSMUST00000033088.6|Rnf40|ENSMUSG00000030816.7|ring finger protein 40
mm10_v2_chr19_+_6061176_6061235	1.38531	Rfx3_Rfx1_Rfx4	ENSMUST00000162726.3|Znhit2|ENSMUSG00000075227.5|zinc finger, HIT domain containing 2
mm10_v2_chr1_-_155417394_155417435	1.37493	Rfx3_Rfx1_Rfx4	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr8_+_72219726_72219785	1.37329	Rfx3_Rfx1_Rfx4	ENSMUST00000003123.8|Fam32a|ENSMUSG00000003039.8|family with sequence similarity 32, member A
mm10_v2_chr18_+_31609512_31609512	1.35342	Rfx3_Rfx1_Rfx4	ENSMUST00000164667.1|B930094E09Rik|ENSMUSG00000092124.1|RIKEN cDNA B930094E09 gene
mm10_v2_chr16_+_20696175_20696211	1.31547	Rfx3_Rfx1_Rfx4	ENSMUST00000128273.1|Fam131a|ENSMUSG00000050821.7|family with sequence similarity 131, member A
mm10_v2_chr1_+_37299882_37299937	1.30125	Rfx3_Rfx1_Rfx4	ENSMUST00000136846.1|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I 	ENSMUST00000027287.4|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I 	ENSMUST00000132401.1|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I
mm10_v2_chr12_-_72070991_72071079	1.29392	Rfx3_Rfx1_Rfx4	ENSMUST00000050649.4|Gpr135|ENSMUSG00000043398.4|G protein-coupled receptor 135
mm10_v2_chrX_+_48623737_48623790	1.29146	Rfx3_Rfx1_Rfx4	ENSMUST00000114936.1|Slc25a14|ENSMUSG00000031105.10|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm10_v2_chr10_+_122678764_122678811	1.2724	Rfx3_Rfx1_Rfx4	ENSMUST00000161487.1|Ppm1h|ENSMUSG00000034613.6|protein phosphatase 1H (PP2C domain containing) 	ENSMUST00000067918.5|Ppm1h|ENSMUSG00000034613.6|protein phosphatase 1H (PP2C domain containing)
mm10_v2_chr8_+_123212857_123212911	1.26459	Rfx3_Rfx1_Rfx4	ENSMUST00000060133.6|Spata33|ENSMUSG00000048478.6|spermatogenesis associated 33
mm10_v2_chr9_-_72985344_72985397	1.26095	Rfx3_Rfx1_Rfx4	ENSMUST00000124565.2|Gm5918|ENSMUSG00000086158.2|predicted gene 5918
mm10_v2_chr11_+_53567361_53567526	1.25444	Rfx3_Rfx1_Rfx4	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr9_+_72985410_72985429	1.23529	Rfx3_Rfx1_Rfx4	ENSMUST00000037977.8|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1
mm10_v2_chr16_-_93603803_93603815	1.22717	Rfx3_Rfx1_Rfx4	ENSMUST00000023669.5|Setd4|ENSMUSG00000022948.8|SET domain containing 4 	ENSMUST00000113951.2|Setd4|ENSMUSG00000022948.8|SET domain containing 4
mm10_v2_chr4_-_126753372_126753440	1.22085	Rfx3_Rfx1_Rfx4	ENSMUST00000030637.7|Ncdn|ENSMUSG00000028833.7|neurochondrin 	ENSMUST00000106116.1|Ncdn|ENSMUSG00000028833.7|neurochondrin
mm10_v2_chr10_+_42860648_42860676	1.2204	Rfx3_Rfx1_Rfx4	ENSMUST00000105495.1|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr17_+_34604262_34604304	1.21654	Rfx3_Rfx1_Rfx4	ENSMUST00000174041.1|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr1_-_155417283_155417323	1.21529	Rfx3_Rfx1_Rfx4	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr8_-_4259257_4259283	1.2066	Rfx3_Rfx1_Rfx4	ENSMUST00000053252.7|Ctxn1|ENSMUSG00000048644.7|cortexin 1
mm10_v2_chr17_+_24549950_24550062	1.20338	Rfx3_Rfx1_Rfx4	ENSMUST00000035565.3|Pkd1|ENSMUSG00000032855.5|polycystic kidney disease 1 homolog
mm10_v2_chr12_+_5411641_5411641	1.1977	Rfx3_Rfx1_Rfx4	ENSMUST00000163627.1|2810032G03Rik|ENSMUSG00000037735.6|RIKEN cDNA 2810032G03 gene
mm10_v2_chr9_-_51008936_51009080	1.19757	Rfx3_Rfx1_Rfx4	ENSMUST00000176824.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000176663.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000041375.10|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2
mm10_v2_chr16_-_3908639_3908689	1.19439	Rfx3_Rfx1_Rfx4	ENSMUST00000115859.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr3_-_127225917_127225959	1.19287	Rfx3_Rfx1_Rfx4	ENSMUST00000182064.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182662.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr2_+_145934800_145934816	1.19231	Rfx3_Rfx1_Rfx4	ENSMUST00000138774.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene 	ENSMUST00000152515.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene 	ENSMUST00000130168.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene 	ENSMUST00000133433.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene 	ENSMUST00000118002.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene
mm10_v2_chr19_-_6942406_6942450	1.19214	Rfx3_Rfx1_Rfx4	ENSMUST00000099782.3|Gpr137|ENSMUSG00000024958.6|G protein-coupled receptor 137
mm10_v2_chr17_-_35979237_35979526	1.19046	Rfx3_Rfx1_Rfx4	ENSMUST00000165613.2|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000173872.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3
mm10_v2_chr9_+_72985568_72985642	1.1897	Rfx3_Rfx1_Rfx4	ENSMUST00000150826.2|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1 	ENSMUST00000085350.4|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1 	ENSMUST00000140675.1|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1
mm10_v2_chr2_-_167492826_167492891	1.18457	Rfx3_Rfx1_Rfx4	ENSMUST00000109211.2|Spata2|ENSMUSG00000047030.9|spermatogenesis associated 2 	ENSMUST00000057627.9|Spata2|ENSMUSG00000047030.9|spermatogenesis associated 2
mm10_v2_chr12_+_113185877_113185937	1.18022	Rfx3_Rfx1_Rfx4	ENSMUST00000058491.6|Tmem121|ENSMUSG00000049036.6|transmembrane protein 121
mm10_v2_chr4_-_41723129_41723179	1.17912	Rfx3_Rfx1_Rfx4	ENSMUST00000171641.1|Dctn3|ENSMUSG00000028447.5|dynactin 3 	ENSMUST00000030158.4|Dctn3|ENSMUSG00000028447.5|dynactin 3
mm10_v2_chr12_+_73997749_73997817	1.1754	Rfx3_Rfx1_Rfx4	ENSMUST00000110451.2|Syt16|ENSMUSG00000044912.9|synaptotagmin XVI
mm10_v2_chr4_-_40722307_40722398	1.1582	Rfx3_Rfx1_Rfx4	ENSMUST00000181475.1|Gm6297|ENSMUSG00000097123.1|predicted gene 6297
mm10_v2_chr2_-_164857542_164857652	1.15381	Rfx3_Rfx1_Rfx4	ENSMUST00000109316.1|Pltp|ENSMUSG00000017754.7|phospholipid transfer protein 	ENSMUST00000156255.1|Pltp|ENSMUSG00000017754.7|phospholipid transfer protein 	ENSMUST00000128110.1|Pltp|ENSMUSG00000017754.7|phospholipid transfer protein 	ENSMUST00000109317.3|Pltp|ENSMUSG00000017754.7|phospholipid transfer protein
mm10_v2_chr9_-_64341145_64341257	1.15165	Rfx3_Rfx1_Rfx4	ENSMUST00000120760.1|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like 	ENSMUST00000168844.2|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like
mm10_v2_chr7_+_139212974_139212993	1.14976	Rfx3_Rfx1_Rfx4	ENSMUST00000016124.8|Lrrc27|ENSMUSG00000015980.8|leucine rich repeat containing 27
mm10_v2_chr7_-_68749170_68749241	1.14238	Rfx3_Rfx1_Rfx4	ENSMUST00000118110.1|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4 	ENSMUST00000048068.7|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4
mm10_v2_chr3_+_108591279_108591414	1.14182	Rfx3_Rfx1_Rfx4	ENSMUST00000051145.8|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47 	ENSMUST00000139626.1|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47
mm10_v2_chr4_+_130107556_130107606	1.12882	Rfx3_Rfx1_Rfx4	ENSMUST00000030563.5|Pef1|ENSMUSG00000028779.10|penta-EF hand domain containing 1
mm10_v2_chr12_+_52699297_52699411	1.12718	Rfx3_Rfx1_Rfx4	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr2_+_164823001_164823040	1.12679	Rfx3_Rfx1_Rfx4	ENSMUST00000132282.1|Zswim1|ENSMUSG00000017764.2|zinc finger SWIM-type containing 1
mm10_v2_chr5_-_137530990_137531049	1.12672	Rfx3_Rfx1_Rfx4	ENSMUST00000132525.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr10_-_39133848_39133912	1.12156	Rfx3_Rfx1_Rfx4	ENSMUST00000134279.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000139743.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000149949.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000124941.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000125042.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000063204.2|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr18_+_35965088_35965110	1.11922	Rfx3_Rfx1_Rfx4	ENSMUST00000175734.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr18_-_22850738_22850759	1.11128	Rfx3_Rfx1_Rfx4	ENSMUST00000092015.4|Nol4|ENSMUSG00000041923.9|nucleolar protein 4 	ENSMUST00000069215.6|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr14_-_118923070_118923167	1.10735	Rfx3_Rfx1_Rfx4	ENSMUST00000047208.5|Dzip1|ENSMUSG00000042156.9|DAZ interacting protein 1
mm10_v2_chr2_-_5714490_5714538	1.09496	Rfx3_Rfx1_Rfx4	ENSMUST00000044009.7|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr2_+_166792525_166792536	1.08069	Rfx3_Rfx1_Rfx4	ENSMUST00000065753.1|Trp53rk|ENSMUSG00000042854.9|transformation related protein 53 regulating kinase
mm10_v2_chr2_-_164857671_164857711	1.07579	Rfx3_Rfx1_Rfx4	ENSMUST00000059954.7|Pltp|ENSMUSG00000017754.7|phospholipid transfer protein
mm10_v2_chrX_+_136590841_136590866	1.07517	Rfx3_Rfx1_Rfx4	ENSMUST00000138047.1|Tceal3|ENSMUSG00000044550.5|transcription elongation factor A (SII)-like 3 	ENSMUST00000145648.1|Tceal3|ENSMUSG00000044550.5|transcription elongation factor A (SII)-like 3
mm10_v2_chr19_-_4283033_4283142	1.06615	Rfx3_Rfx1_Rfx4	ENSMUST00000167215.1|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D 	ENSMUST00000056888.6|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D
mm10_v2_chr12_-_110682606_110682623	1.06412	Rfx3_Rfx1_Rfx4	ENSMUST00000070659.5|1700001K19Rik|ENSMUSG00000056508.5|RIKEN cDNA 1700001K19 gene
mm10_v2_chr16_-_96192222_96192262	1.05322	Rfx3_Rfx1_Rfx4	ENSMUST00000113804.1|Lca5l|ENSMUSG00000045275.9|Leber congenital amaurosis 5-like 	ENSMUST00000054855.7|Lca5l|ENSMUSG00000045275.9|Leber congenital amaurosis 5-like
mm10_v2_chr15_-_98762992_98763190	1.04773	Rfx3_Rfx1_Rfx4	ENSMUST00000156572.1|Arf3|ENSMUSG00000051853.8|ADP-ribosylation factor 3
mm10_v2_chr6_-_77979515_77979622	1.0415	Rfx3_Rfx1_Rfx4	ENSMUST00000159626.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000075340.5|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000162273.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2
mm10_v2_chr6_-_122340200_122340244	1.03905	Rfx3_Rfx1_Rfx4	ENSMUST00000159384.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr15_-_66500857_66500910	1.03804	Rfx3_Rfx1_Rfx4	ENSMUST00000023006.6|Lrrc6|ENSMUSG00000022375.6|leucine rich repeat containing 6 (testis)
mm10_v2_chr1_+_24678536_24678609	1.03104	Rfx3_Rfx1_Rfx4	ENSMUST00000095062.3|Lmbrd1|ENSMUSG00000073725.2|LMBR1 domain containing 1
mm10_v2_chr18_+_35965036_35965087	1.02938	Rfx3_Rfx1_Rfx4	ENSMUST00000176873.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2 	ENSMUST00000177432.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr11_+_49794157_49794187	1.02781	Rfx3_Rfx1_Rfx4	ENSMUST00000020629.4|Gfpt2|ENSMUSG00000020363.6|glutamine fructose-6-phosphate transaminase 2
mm10_v2_chr3_-_146770603_146770781	1.0271	Rfx3_Rfx1_Rfx4	ENSMUST00000106138.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr15_-_98763195_98763220	1.02645	Rfx3_Rfx1_Rfx4	ENSMUST00000053183.9|Arf3|ENSMUSG00000051853.8|ADP-ribosylation factor 3
mm10_v2_chr19_+_4855129_4855269	1.02177	Rfx3_Rfx1_Rfx4	ENSMUST00000119694.1|Ctsf|ENSMUSG00000083282.2|cathepsin F
mm10_v2_chr9_+_22003035_22003046	1.01782	Rfx3_Rfx1_Rfx4	ENSMUST00000115331.2|Prkcsh|ENSMUSG00000003402.7|protein kinase C substrate 80K-H 	ENSMUST00000003493.7|Prkcsh|ENSMUSG00000003402.7|protein kinase C substrate 80K-H
mm10_v2_chr7_-_19149189_19149273	1.01576	Rfx3_Rfx1_Rfx4	ENSMUST00000032566.1|Qpctl|ENSMUSG00000030407.1|glutaminyl-peptide cyclotransferase-like
mm10_v2_chr7_+_139213239_139213304	1.01481	Rfx3_Rfx1_Rfx4	ENSMUST00000106104.1|Lrrc27|ENSMUSG00000015980.8|leucine rich repeat containing 27
mm10_v2_chr11_+_101552135_101552184	1.00202	Rfx3_Rfx1_Rfx4	ENSMUST00000103099.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1
mm10_v2_chr7_-_31054815_31054853	1.00148	Rfx3_Rfx1_Rfx4	ENSMUST00000071697.4|Fxyd1|ENSMUSG00000036570.8|FXYD domain-containing ion transport regulator 1 	ENSMUST00000108110.3|Fxyd1|ENSMUSG00000036570.8|FXYD domain-containing ion transport regulator 1
mm10_v2_chr2_-_73775341_73775378	1.0002	Rfx3_Rfx1_Rfx4	ENSMUST00000112024.3|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000166199.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000180045.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr17_-_56609689_56609771	0.994843	Rfx3_Rfx1_Rfx4	ENSMUST00000052832.5|2410015M20Rik|ENSMUSG00000049760.5|RIKEN cDNA 2410015M20 gene
mm10_v2_chr10_-_62578387_62578457	0.994552	Rfx3_Rfx1_Rfx4	ENSMUST00000162525.1|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene 	ENSMUST00000159704.1|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene 	ENSMUST00000162759.1|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene 	ENSMUST00000065887.7|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene
mm10_v2_chr3_-_146770218_146770261	0.990033	Rfx3_Rfx1_Rfx4	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr17_+_34836987_34837049	0.986879	Rfx3_Rfx1_Rfx4	ENSMUST00000173874.1|Dxo|ENSMUSG00000040482.9|decapping exoribonuclease 	ENSMUST00000046244.8|Dxo|ENSMUSG00000040482.9|decapping exoribonuclease 	ENSMUST00000180043.1|Dxo|ENSMUSG00000040482.9|decapping exoribonuclease
mm10_v2_chr17_+_6430112_6430204	0.970708	Rfx3_Rfx1_Rfx4	ENSMUST00000179569.1|Dynlt1b|ENSMUSG00000096255.1|dynein light chain Tctex-type 1B
mm10_v2_chr5_+_66260121_66260312	0.967004	Rfx3_Rfx1_Rfx4	ENSMUST00000031109.3|Nsun7|ENSMUSG00000029206.7|NOL1/NOP2/Sun domain family, member 7 	ENSMUST00000113720.1|Nsun7|ENSMUSG00000029206.7|NOL1/NOP2/Sun domain family, member 7
mm10_v2_chr2_+_36049453_36049507	0.965479	Rfx3_Rfx1_Rfx4	ENSMUST00000028256.4|Morn5|ENSMUSG00000026894.4|MORN repeat containing 5
mm10_v2_chr12_-_110840905_110840950	0.961196	Rfx3_Rfx1_Rfx4	ENSMUST00000177224.1|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000084974.4|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000070565.8|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30
mm10_v2_chr8_+_94772009_94772009	0.953371	Rfx3_Rfx1_Rfx4	ENSMUST00000034230.5|Cx3cl1|ENSMUSG00000031778.6|chemokine (C-X3-C motif) ligand 1
mm10_v2_chr5_+_124112297_124112351	0.952102	Rfx3_Rfx1_Rfx4	ENSMUST00000024470.6|Ogfod2|ENSMUSG00000023707.7|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENSMUST00000119269.1|Ogfod2|ENSMUSG00000023707.7|2-oxoglutarate and iron-dependent oxygenase domain containing 2
mm10_v2_chr16_+_3908801_3909031	0.936078	Rfx3_Rfx1_Rfx4	ENSMUST00000145150.2|Cluap1|ENSMUSG00000014232.8|clusterin associated protein 1 	ENSMUST00000040881.7|Cluap1|ENSMUSG00000014232.8|clusterin associated protein 1
mm10_v2_chr9_-_109059711_109059771	0.935712	Rfx3_Rfx1_Rfx4	ENSMUST00000061973.4|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr11_-_103267405_103267472	0.933211	Rfx3_Rfx1_Rfx4	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr8_-_27202542_27202557	0.932473	Rfx3_Rfx1_Rfx4	ENSMUST00000038174.6|Got1l1|ENSMUSG00000039720.6|glutamic-oxaloacetic transaminase 1-like 1
mm10_v2_chr11_+_109650921_109651003	0.931091	Rfx3_Rfx1_Rfx4	ENSMUST00000049527.6|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chr11_+_101425068_101425114	0.92593	Rfx3_Rfx1_Rfx4	ENSMUST00000040561.5|Rundc1|ENSMUSG00000035007.5|RUN domain containing 1
mm10_v2_chr7_-_30232186_30232272	0.915859	Rfx3_Rfx1_Rfx4	ENSMUST00000006254.5|Tbcb|ENSMUSG00000006095.6|tubulin folding cofactor B
mm10_v2_chr14_+_55094835_55094835	0.91337	Rfx3_Rfx1_Rfx4	ENSMUST00000050575.7|Thtpa|ENSMUSG00000045691.7|thiamine triphosphatase
mm10_v2_chr17_+_85090647_85090726	0.910871	Rfx3_Rfx1_Rfx4	ENSMUST00000095188.5|Camkmt|ENSMUSG00000071037.5|calmodulin-lysine N-methyltransferase
mm10_v2_chr14_-_54253907_54253920	0.909537	Rfx3_Rfx1_Rfx4	ENSMUST00000128231.1|Dad1|ENSMUSG00000022174.8|defender against cell death 1
mm10_v2_chr14_-_78536762_78536851	0.90536	Rfx3_Rfx1_Rfx4	ENSMUST00000123853.1|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr9_+_46012810_46012821	0.889878	Rfx3_Rfx1_Rfx4	ENSMUST00000126865.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr9_+_65460926_65460983	0.885869	Rfx3_Rfx1_Rfx4	ENSMUST00000034955.6|Spg21|ENSMUSG00000032388.6|spastic paraplegia 21 homolog (human)
mm10_v2_chr10_+_74967164_74967203	0.885732	Rfx3_Rfx1_Rfx4	ENSMUST00000037813.4|Gnaz|ENSMUSG00000040009.5|guanine nucleotide binding protein, alpha z subunit
mm10_v2_chr17_+_56584973_56585059	0.881538	Rfx3_Rfx1_Rfx4	ENSMUST00000182533.1|Safb|ENSMUSG00000071054.6|scaffold attachment factor B 	ENSMUST00000182800.1|Safb|ENSMUSG00000071054.6|scaffold attachment factor B 	ENSMUST00000095224.4|Safb|ENSMUSG00000071054.6|scaffold attachment factor B
mm10_v2_chr19_+_6942501_6942584	0.880882	Rfx3_Rfx1_Rfx4	ENSMUST00000113423.3|Bad|ENSMUSG00000024959.7|BCL2-associated agonist of cell death
mm10_v2_chr5_+_123252087_123252136	0.87986	Rfx3_Rfx1_Rfx4	ENSMUST00000121964.1|Wdr66|ENSMUSG00000029442.12|WD repeat domain 66
mm10_v2_chr9_-_64341288_64341311	0.874666	Rfx3_Rfx1_Rfx4	ENSMUST00000068367.7|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like
mm10_v2_chr17_-_35979679_35979831	0.871586	Rfx3_Rfx1_Rfx4	ENSMUST00000173724.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000172900.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000174849.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3
mm10_v2_chr15_-_84065329_84065364	0.868992	Rfx3_Rfx1_Rfx4	ENSMUST00000156187.1|Efcab6|ENSMUSG00000022441.11|EF-hand calcium binding domain 6
mm10_v2_chr1_-_84696182_84696221	0.858581	Rfx3_Rfx1_Rfx4	ENSMUST00000049126.6|Dner|ENSMUSG00000036766.6|delta/notch-like EGF-related receptor
mm10_v2_chr4_-_43653560_43653594	0.858517	Rfx3_Rfx1_Rfx4	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr11_-_59839828_59839843	0.852694	Rfx3_Rfx1_Rfx4	ENSMUST00000019517.3|Cops3|ENSMUSG00000019373.5|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
mm10_v2_chr17_-_24650270_24650311	0.852022	Rfx3_Rfx1_Rfx4	ENSMUST00000002572.4|Slc9a3r2|ENSMUSG00000002504.8|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm10_v2_chr9_-_98563580_98563620	0.850949	Rfx3_Rfx1_Rfx4	ENSMUST00000058992.2|4930579K19Rik|ENSMUSG00000051074.2|RIKEN cDNA 4930579K19 gene
mm10_v2_chr1_-_31222604_31222620	0.846745	Rfx3_Rfx1_Rfx4	ENSMUST00000127775.1|4931428L18Rik|ENSMUSG00000086727.1|RIKEN cDNA 4931428L18 gene
mm10_v2_chrX_-_152368680_152368740	0.84443	Rfx3_Rfx1_Rfx4	ENSMUST00000070316.5|Gpr173|ENSMUSG00000056679.7|G-protein coupled receptor 173
mm10_v2_chr2_+_125136692_125136769	0.844345	Rfx3_Rfx1_Rfx4	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr17_-_46752170_46752231	0.84183	Rfx3_Rfx1_Rfx4	ENSMUST00000121671.1|Cnpy3|ENSMUSG00000023973.7|canopy 3 homolog (zebrafish) 	ENSMUST00000059844.6|Cnpy3|ENSMUSG00000023973.7|canopy 3 homolog (zebrafish)
mm10_v2_chr6_+_83185946_83186151	0.840997	Rfx3_Rfx1_Rfx4	ENSMUST00000113907.1|Dctn1|ENSMUSG00000031865.9|dynactin 1
mm10_v2_chr14_-_31001588_31001672	0.834574	Rfx3_Rfx1_Rfx4	ENSMUST00000162092.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae) 	ENSMUST00000160342.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae)
mm10_v2_chr5_+_136987019_136987019	0.824994	Rfx3_Rfx1_Rfx4	ENSMUST00000004968.4|Plod3|ENSMUSG00000004846.4|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm10_v2_chr14_-_32085595_32085639	0.824708	Rfx3_Rfx1_Rfx4	ENSMUST00000022461.4|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3 	ENSMUST00000067955.5|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3 	ENSMUST00000124303.1|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3 	ENSMUST00000112000.1|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3
mm10_v2_chr6_+_88084473_88084527	0.821875	Rfx3_Rfx1_Rfx4	ENSMUST00000032143.6|Rpn1|ENSMUSG00000030062.6|ribophorin I
mm10_v2_chr7_-_140881811_140881869	0.818726	Rfx3_Rfx1_Rfx4	ENSMUST00000106048.3|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000147331.2|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000137710.1|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chr14_-_70153811_70153846	0.806046	Rfx3_Rfx1_Rfx4	ENSMUST00000035612.5|Ccar2|ENSMUSG00000033712.5|cell cycle activator and apoptosis regulator 2
mm10_v2_chr15_+_79229140_79229173	0.804979	Rfx3_Rfx1_Rfx4	ENSMUST00000163571.1|Pick1|ENSMUSG00000068206.6|protein interacting with C kinase 1
mm10_v2_chr10_+_20952547_20952593	0.798158	Rfx3_Rfx1_Rfx4	ENSMUST00000105525.4|Ahi1|ENSMUSG00000019986.10|Abelson helper integration site 1
mm10_v2_chr10_-_39133914_39133927	0.794177	Rfx3_Rfx1_Rfx4	ENSMUST00000135785.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr11_+_72689997_72690015	0.792777	Rfx3_Rfx1_Rfx4	ENSMUST00000155998.1|Ankfy1|ENSMUSG00000020790.8|ankyrin repeat and FYVE domain containing 1
mm10_v2_chr19_-_4906598_4906632	0.78574	Rfx3_Rfx1_Rfx4	ENSMUST00000053506.6|Bbs1|ENSMUSG00000006464.8|Bardet-Biedl syndrome 1 (human)
mm10_v2_chr2_-_38287347_38287394	0.784478	Rfx3_Rfx1_Rfx4	ENSMUST00000102787.3|Dennd1a|ENSMUSG00000035392.11|DENN/MADD domain containing 1A
mm10_v2_chr7_-_44553901_44553955	0.784236	Rfx3_Rfx1_Rfx4	ENSMUST00000107910.1|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2 	ENSMUST00000167197.1|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2 	ENSMUST00000107911.1|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2 	ENSMUST00000073488.5|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2
mm10_v2_chr2_+_167932327_167932379	0.782578	Rfx3_Rfx1_Rfx4	ENSMUST00000029053.7|Ptpn1|ENSMUSG00000027540.7|protein tyrosine phosphatase, non-receptor type 1
mm10_v2_chr7_-_140882274_140882330	0.781184	Rfx3_Rfx1_Rfx4	ENSMUST00000026559.7|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chr11_-_76468396_76468473	0.777272	Rfx3_Rfx1_Rfx4	ENSMUST00000065028.7|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr3_+_65109343_65109420	0.769808	Rfx3_Rfx1_Rfx4	ENSMUST00000159525.1|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENSMUST00000049230.8|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm10_v2_chr12_-_84361802_84361838	0.767428	Rfx3_Rfx1_Rfx4	ENSMUST00000021659.1|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B 	ENSMUST00000065536.2|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B
mm10_v2_chr5_+_21424934_21425013	0.762382	Rfx3_Rfx1_Rfx4	ENSMUST00000056045.4|Fam185a|ENSMUSG00000047221.5|family with sequence similarity 185, member A
mm10_v2_chr8_-_25597459_25597517	0.74528	Rfx3_Rfx1_Rfx4	ENSMUST00000079160.6|Letm2|ENSMUSG00000037363.8|leucine zipper-EF-hand containing transmembrane protein 2
mm10_v2_chr2_-_134644019_134644042	0.742506	Rfx3_Rfx1_Rfx4	ENSMUST00000110120.1|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr16_+_3909032_3909106	0.741542	Rfx3_Rfx1_Rfx4	ENSMUST00000124849.1|Cluap1|ENSMUSG00000014232.8|clusterin associated protein 1
mm10_v2_chr6_+_119175247_119175292	0.740229	Rfx3_Rfx1_Rfx4	ENSMUST00000112777.2|Dcp1b|ENSMUSG00000041477.8|DCP1 decapping enzyme homolog B (S. cerevisiae) 	ENSMUST00000073909.5|Dcp1b|ENSMUSG00000041477.8|DCP1 decapping enzyme homolog B (S. cerevisiae)
mm10_v2_chr4_-_43653542_43653557	0.739835	Rfx3_Rfx1_Rfx4	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr15_-_98093245_98093260	0.732292	Rfx3_Rfx1_Rfx4	ENSMUST00000180657.1|Senp1|ENSMUSG00000033075.11|SUMO1/sentrin specific peptidase 1
mm10_v2_chr6_+_83109071_83109114	0.731436	Rfx3_Rfx1_Rfx4	ENSMUST00000113938.3|Mrpl53|ENSMUSG00000030037.8|mitochondrial ribosomal protein L53
mm10_v2_chr7_+_30231884_30231948	0.724522	Rfx3_Rfx1_Rfx4	ENSMUST00000019882.9|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr8_-_111933761_111933816	0.724349	Rfx3_Rfx1_Rfx4	ENSMUST00000034429.7|Tmem231|ENSMUSG00000031951.7|transmembrane protein 231
mm10_v2_chr3_+_68468162_68468209	0.719387	Rfx3_Rfx1_Rfx4	ENSMUST00000182532.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr16_-_91728599_91728637	0.715238	Rfx3_Rfx1_Rfx4	ENSMUST00000122254.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr2_+_164497518_164497560	0.712716	Rfx3_Rfx1_Rfx4	ENSMUST00000103101.4|Pigt|ENSMUSG00000017721.9|phosphatidylinositol glycan anchor biosynthesis, class T 	ENSMUST00000117066.1|Pigt|ENSMUSG00000017721.9|phosphatidylinositol glycan anchor biosynthesis, class T
mm10_v2_chr2_+_153161303_153161339	0.711575	Rfx3_Rfx1_Rfx4	ENSMUST00000089027.2|Tm9sf4|ENSMUSG00000068040.4|transmembrane 9 superfamily protein member 4
mm10_v2_chr8_+_122611618_122611663	0.707911	Rfx3_Rfx1_Rfx4	ENSMUST00000015157.8|Trappc2l|ENSMUSG00000015013.8|trafficking protein particle complex 2-like
mm10_v2_chr11_+_9048575_9048630	0.707174	Rfx3_Rfx1_Rfx4	ENSMUST00000043285.4|Gm11992|ENSMUSG00000040978.4|predicted gene 11992
mm10_v2_chr14_-_60197173_60197185	0.703913	Rfx3_Rfx1_Rfx4	ENSMUST00000131670.1|Atp8a2|ENSMUSG00000021983.9|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm10_v2_chr2_-_5895319_5895432	0.701699	Rfx3_Rfx1_Rfx4	ENSMUST00000026926.4|Sec61a2|ENSMUSG00000025816.9|Sec61, alpha subunit 2 (S. cerevisiae) 	ENSMUST00000102981.3|Sec61a2|ENSMUSG00000025816.9|Sec61, alpha subunit 2 (S. cerevisiae)
mm10_v2_chr7_+_67222544_67222635	0.701204	Rfx3_Rfx1_Rfx4	ENSMUST00000058771.5|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4 	ENSMUST00000179106.1|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4
mm10_v2_chr9_-_60687459_60687672	0.698523	Rfx3_Rfx1_Rfx4	ENSMUST00000114032.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000166168.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000132366.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr6_-_83125029_83125135	0.693764	Rfx3_Rfx1_Rfx4	ENSMUST00000032109.4|Ino80b|ENSMUSG00000030034.5|INO80 complex subunit B
mm10_v2_chr2_-_90904827_90904940	0.69036	Rfx3_Rfx1_Rfx4	ENSMUST00000005647.3|Ndufs3|ENSMUSG00000005510.3|NADH dehydrogenase (ubiquinone) Fe-S protein 3
mm10_v2_chr11_+_109650574_109650579	0.688617	Rfx3_Rfx1_Rfx4	ENSMUST00000106676.1|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chr4_+_129960760_129960808	0.685735	Rfx3_Rfx1_Rfx4	ENSMUST00000139884.1|1700003M07Rik|ENSMUSG00000085389.1|RIKEN cDNA 1700003M07 gene
mm10_v2_chr5_-_136986829_136986901	0.683539	Rfx3_Rfx1_Rfx4	ENSMUST00000034953.7|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1 	ENSMUST00000085941.5|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1
mm10_v2_chr17_-_57011271_57011326	0.682342	Rfx3_Rfx1_Rfx4	ENSMUST00000002733.6|Gtf2f1|ENSMUSG00000002658.9|general transcription factor IIF, polypeptide 1
mm10_v2_chr16_-_4964168_4964237	0.680786	Rfx3_Rfx1_Rfx4	ENSMUST00000023157.4|Anks3|ENSMUSG00000022515.5|ankyrin repeat and sterile alpha motif domain containing 3
mm10_v2_chr1_-_59237093_59237256	0.677189	Rfx3_Rfx1_Rfx4	ENSMUST00000163058.1|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile) 	ENSMUST00000027178.6|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile)
mm10_v2_chr4_+_138434647_138434748	0.677073	Rfx3_Rfx1_Rfx4	ENSMUST00000044058.4|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1 	ENSMUST00000105813.1|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1 	ENSMUST00000105815.1|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1
mm10_v2_chr14_-_78536854_78536879	0.676706	Rfx3_Rfx1_Rfx4	ENSMUST00000022593.5|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr3_+_124321031_124321113	0.675852	Rfx3_Rfx1_Rfx4	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr19_-_42086338_42086375	0.672219	Rfx3_Rfx1_Rfx4	ENSMUST00000051772.8|Morn4|ENSMUSG00000049670.8|MORN repeat containing 4
mm10_v2_chr4_-_149426603_149426749	0.671863	Rfx3_Rfx1_Rfx4	ENSMUST00000103212.3|Ube4b|ENSMUSG00000028960.12|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm10_v2_chr2_-_28583189_28583230	0.665634	Rfx3_Rfx1_Rfx4	ENSMUST00000113889.2|Gtf3c5|ENSMUSG00000026816.8|general transcription factor IIIC, polypeptide 5
mm10_v2_chr13_-_49320219_49320311	0.658094	Rfx3_Rfx1_Rfx4	ENSMUST00000110086.1|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr9_-_59353430_59353508	0.654975	Rfx3_Rfx1_Rfx4	ENSMUST00000026265.6|Bbs4|ENSMUSG00000025235.7|Bardet-Biedl syndrome 4 (human)
mm10_v2_chr16_-_91728701_91728802	0.65474	Rfx3_Rfx1_Rfx4	ENSMUST00000114023.2|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1 	ENSMUST00000117644.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr2_+_31152316_31152360	0.650991	Rfx3_Rfx1_Rfx4	ENSMUST00000056433.6|Gpr107|ENSMUSG00000000194.7|G protein-coupled receptor 107
mm10_v2_chr17_+_34972687_34972705	0.649843	Rfx3_Rfx1_Rfx4	ENSMUST00000007248.3|Hspa1l|ENSMUSG00000007033.3|heat shock protein 1-like
mm10_v2_chr2_+_29788237_29788302	0.647451	Rfx3_Rfx1_Rfx4	ENSMUST00000028137.3|Coq4|ENSMUSG00000026798.4|coenzyme Q4 homolog (yeast) 	ENSMUST00000148791.1|Coq4|ENSMUSG00000026798.4|coenzyme Q4 homolog (yeast)
mm10_v2_chr15_-_71727815_71727848	0.641138	Rfx3_Rfx1_Rfx4	ENSMUST00000022953.8|Fam135b|ENSMUSG00000036800.7|family with sequence similarity 135, member B
mm10_v2_chr5_-_114823460_114823475	0.639472	Rfx3_Rfx1_Rfx4	ENSMUST00000140374.1|Gm20499|ENSMUSG00000092252.1|predicted gene 20499 	ENSMUST00000100850.4|2610524H06Rik|ENSMUSG00000092486.1|RIKEN cDNA 2610524H06 gene
mm10_v2_chr16_-_91728975_91729092	0.629634	Rfx3_Rfx1_Rfx4	ENSMUST00000073466.6|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr7_-_118705708_118705786	0.624822	Rfx3_Rfx1_Rfx4	ENSMUST00000038791.8|Gde1|ENSMUSG00000033917.8|glycerophosphodiester phosphodiesterase 1
mm10_v2_chr9_+_72985504_72985567	0.621447	Rfx3_Rfx1_Rfx4	ENSMUST00000156879.1|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1
mm10_v2_chr15_-_79658749_79658798	0.615861	Rfx3_Rfx1_Rfx4	ENSMUST00000109646.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr12_+_110889231_110889305	0.615701	Rfx3_Rfx1_Rfx4	ENSMUST00000169597.1|Tecpr2|ENSMUSG00000021275.9|tectonin beta-propeller repeat containing 2 	ENSMUST00000165978.1|Tecpr2|ENSMUSG00000021275.9|tectonin beta-propeller repeat containing 2
mm10_v2_chr2_-_5063996_5064048	0.613576	Rfx3_Rfx1_Rfx4	ENSMUST00000114996.1|Optn|ENSMUSG00000026672.5|optineurin
mm10_v2_chr15_+_76671615_76671710	0.612984	Rfx3_Rfx1_Rfx4	ENSMUST00000037551.8|Ppp1r16a|ENSMUSG00000033819.9|protein phosphatase 1, regulatory (inhibitor) subunit 16A
mm10_v2_chr14_+_77156733_77156823	0.608147	Rfx3_Rfx1_Rfx4	ENSMUST00000022589.7|Enox1|ENSMUSG00000022012.8|ecto-NOX disulfide-thiol exchanger 1
mm10_v2_chr8_+_120488416_120488490	0.608122	Rfx3_Rfx1_Rfx4	ENSMUST00000034279.9|Gse1|ENSMUSG00000031822.12|genetic suppressor element 1
mm10_v2_chr15_+_78428564_78428636	0.604072	Rfx3_Rfx1_Rfx4	ENSMUST00000166142.2|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17 	ENSMUST00000162517.1|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17 	ENSMUST00000089414.4|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17
mm10_v2_chr1_+_179668202_179668268	0.603205	Rfx3_Rfx1_Rfx4	ENSMUST00000040538.3|Sccpdh|ENSMUSG00000038936.7|saccharopine dehydrogenase (putative)
mm10_v2_chr3_+_98382438_98382520	0.600048	Rfx3_Rfx1_Rfx4	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr15_+_79659196_79659267	0.591286	Rfx3_Rfx1_Rfx4	ENSMUST00000023064.7|Cby1|ENSMUSG00000022428.7|chibby homolog 1 (Drosophila)
mm10_v2_chr11_-_87359011_87359081	0.588416	Rfx3_Rfx1_Rfx4	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr5_-_124187150_124187225	0.587064	Rfx3_Rfx1_Rfx4	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr11_+_78536355_78536368	0.586892	Rfx3_Rfx1_Rfx4	ENSMUST00000128788.1|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20
mm10_v2_chr17_+_33955902_33955926	0.584778	Rfx3_Rfx1_Rfx4	ENSMUST00000173196.2|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast)
mm10_v2_chr3_-_126998408_126998463	0.581484	Rfx3_Rfx1_Rfx4	ENSMUST00000182764.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000044443.8|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr17_-_23975183_23975235	0.581464	Rfx3_Rfx1_Rfx4	ENSMUST00000147626.1|Prss30|ENSMUSG00000024124.3|protease, serine, 30 	ENSMUST00000024936.3|Prss30|ENSMUSG00000024124.3|protease, serine, 30
mm10_v2_chr8_-_33747724_33747781	0.575491	Rfx3_Rfx1_Rfx4	ENSMUST00000179364.1|Smim18|ENSMUSG00000094500.1|small integral membrane protein 18
mm10_v2_chr11_+_70030023_70030083	0.575236	Rfx3_Rfx1_Rfx4	ENSMUST00000143920.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr11_+_97801917_97801998	0.57309	Rfx3_Rfx1_Rfx4	ENSMUST00000127033.2|Lasp1|ENSMUSG00000038366.9|LIM and SH3 protein 1
mm10_v2_chr19_-_3282958_3283048	0.571492	Rfx3_Rfx1_Rfx4	ENSMUST00000119292.1|Ighmbp2|ENSMUSG00000024831.7|immunoglobulin mu binding protein 2 	ENSMUST00000025751.3|Ighmbp2|ENSMUSG00000024831.7|immunoglobulin mu binding protein 2
mm10_v2_chr1_-_171287931_171287991	0.570247	Rfx3_Rfx1_Rfx4	ENSMUST00000111306.3|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21 	ENSMUST00000065941.5|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21
mm10_v2_chr2_-_52742169_52742281	0.562496	Rfx3_Rfx1_Rfx4	ENSMUST00000102759.1|Stam2|ENSMUSG00000055371.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 	ENSMUST00000127316.1|Stam2|ENSMUSG00000055371.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
mm10_v2_chr9_-_14771004_14771044	0.561684	Rfx3_Rfx1_Rfx4	ENSMUST00000060330.3|1700012B09Rik|ENSMUSG00000031927.3|RIKEN cDNA 1700012B09 gene
mm10_v2_chr1_-_171287916_171287929	0.558349	Rfx3_Rfx1_Rfx4	ENSMUST00000111305.1|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21
mm10_v2_chr2_-_79428891_79428990	0.557214	Rfx3_Rfx1_Rfx4	ENSMUST00000143974.1|Cerkl|ENSMUSG00000075256.3|ceramide kinase-like
mm10_v2_chr7_+_19076242_19076273	0.555824	Rfx3_Rfx1_Rfx4	ENSMUST00000032570.7|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif 	ENSMUST00000108479.1|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif
mm10_v2_chr2_-_134644079_134644109	0.554055	Rfx3_Rfx1_Rfx4	ENSMUST00000110119.1|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr15_+_30172570_30172600	0.552379	Rfx3_Rfx1_Rfx4	ENSMUST00000081728.5|Ctnnd2|ENSMUSG00000022240.9|catenin (cadherin associated protein), delta 2
mm10_v2_chr19_+_8840519_8840549	0.549484	Rfx3_Rfx1_Rfx4	ENSMUST00000086058.6|Bscl2|ENSMUSG00000071657.6|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm10_v2_chr1_+_90603425_90603511	0.547806	Rfx3_Rfx1_Rfx4	ENSMUST00000036153.5|Cops8|ENSMUSG00000034432.5|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm10_v2_chr15_-_68258787_68258880	0.547007	Rfx3_Rfx1_Rfx4	ENSMUST00000162173.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000160248.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000159430.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000162054.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing
mm10_v2_chr3_-_57847478_57847610	0.546524	Rfx3_Rfx1_Rfx4	ENSMUST00000120289.1|Pfn2|ENSMUSG00000027805.10|profilin 2 	ENSMUST00000066882.8|Pfn2|ENSMUSG00000027805.10|profilin 2
mm10_v2_chr2_-_91444622_91444726	0.543018	Rfx3_Rfx1_Rfx4	ENSMUST00000064652.7|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000102594.4|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000094835.2|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene
mm10_v2_chr12_+_72536342_72536396	0.541421	Rfx3_Rfx1_Rfx4	ENSMUST00000044352.6|Pcnxl4|ENSMUSG00000034501.6|pecanex-like 4 (Drosophila)
mm10_v2_chr11_-_59839745_59839763	0.538168	Rfx3_Rfx1_Rfx4	ENSMUST00000141415.1|Cops3|ENSMUSG00000019373.5|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
mm10_v2_chr1_-_171360798_171360798	0.535877	Rfx3_Rfx1_Rfx4	ENSMUST00000061878.4|Klhdc9|ENSMUSG00000045259.4|kelch domain containing 9
mm10_v2_chr14_+_32085804_32085877	0.534197	Rfx3_Rfx1_Rfx4	ENSMUST00000170600.1|Oxnad1|ENSMUSG00000021906.7|oxidoreductase NAD-binding domain containing 1 	ENSMUST00000168986.1|Oxnad1|ENSMUSG00000021906.7|oxidoreductase NAD-binding domain containing 1 	ENSMUST00000169649.1|Oxnad1|ENSMUSG00000021906.7|oxidoreductase NAD-binding domain containing 1
mm10_v2_chr3_-_89214378_89214430	0.529551	Rfx3_Rfx1_Rfx4	ENSMUST00000073572.4|Mtx1|ENSMUSG00000064068.7|metaxin 1
mm10_v2_chr18_-_43687695_43687773	0.527004	Rfx3_Rfx1_Rfx4	ENSMUST00000082254.6|Jakmip2|ENSMUSG00000024502.9|janus kinase and microtubule interacting protein 2
mm10_v2_chr10_+_60399726_60399772	0.526975	Rfx3_Rfx1_Rfx4	ENSMUST00000164428.1|Gm17455|ENSMUSG00000090439.1|predicted gene, 17455
mm10_v2_chr9_+_82829806_82829834	0.524956	Rfx3_Rfx1_Rfx4	ENSMUST00000113245.2|Irak1bp1|ENSMUSG00000032251.6|interleukin-1 receptor-associated kinase 1 binding protein 1 	ENSMUST00000034783.4|Irak1bp1|ENSMUSG00000032251.6|interleukin-1 receptor-associated kinase 1 binding protein 1
mm10_v2_chr16_+_78301673_78301760	0.524661	Rfx3_Rfx1_Rfx4	ENSMUST00000114229.2|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr11_-_101278927_101279114	0.524084	Rfx3_Rfx1_Rfx4	ENSMUST00000168089.1|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3 	ENSMUST00000017332.3|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3
mm10_v2_chr11_-_83302586_83302637	0.523816	Rfx3_Rfx1_Rfx4	ENSMUST00000176374.1|Pex12|ENSMUSG00000018733.4|peroxisomal biogenesis factor 12
mm10_v2_chr9_-_122950922_122950953	0.523679	Rfx3_Rfx1_Rfx4	ENSMUST00000118422.1|1110059G10Rik|ENSMUSG00000032551.6|RIKEN cDNA 1110059G10 gene
mm10_v2_chr3_+_98382538_98382553	0.522917	Rfx3_Rfx1_Rfx4	ENSMUST00000178372.1|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr7_+_122067164_122067216	0.520897	Rfx3_Rfx1_Rfx4	ENSMUST00000033158.4|Ubfd1|ENSMUSG00000030870.6|ubiquitin family domain containing 1
mm10_v2_chr17_+_33955812_33955901	0.520453	Rfx3_Rfx1_Rfx4	ENSMUST00000025178.9|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast) 	ENSMUST00000114330.2|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast)
mm10_v2_chr13_-_49309217_49309257	0.520373	Rfx3_Rfx1_Rfx4	ENSMUST00000110087.2|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr4_+_41465134_41465159	0.519589	Rfx3_Rfx1_Rfx4	ENSMUST00000030154.6|Nudt2|ENSMUSG00000028443.6|nudix (nucleoside diphosphate linked moiety X)-type motif 2
mm10_v2_chr5_+_66259890_66259912	0.515479	Rfx3_Rfx1_Rfx4	ENSMUST00000065530.6|Nsun7|ENSMUSG00000029206.7|NOL1/NOP2/Sun domain family, member 7
mm10_v2_chr16_+_36041184_36041197	0.513542	Rfx3_Rfx1_Rfx4	ENSMUST00000042203.8|Wdr5b|ENSMUSG00000034379.8|WD repeat domain 5B
mm10_v2_chr17_-_34603675_34603702	0.5115	Rfx3_Rfx1_Rfx4	ENSMUST00000015622.7|Rnf5|ENSMUSG00000015478.7|ring finger protein 5
mm10_v2_chr13_-_38635036_38635119	0.510319	Rfx3_Rfx1_Rfx4	ENSMUST00000035899.6|Bloc1s5|ENSMUSG00000038982.9|biogenesis of organelles complex-1, subunit 5, muted
mm10_v2_chr9_+_110476985_110476999	0.503182	Rfx3_Rfx1_Rfx4	ENSMUST00000084948.4|Kif9|ENSMUSG00000032489.11|kinesin family member 9 	ENSMUST00000061155.6|Kif9|ENSMUSG00000032489.11|kinesin family member 9 	ENSMUST00000140686.1|Kif9|ENSMUSG00000032489.11|kinesin family member 9 	ENSMUST00000084952.5|Kif9|ENSMUSG00000032489.11|kinesin family member 9
mm10_v2_chr7_-_92637079_92637147	0.49977	Rfx3_Rfx1_Rfx4	ENSMUST00000056106.7|Ankrd42|ENSMUSG00000041343.12|ankyrin repeat domain 42 	ENSMUST00000118157.1|Ankrd42|ENSMUSG00000041343.12|ankyrin repeat domain 42
mm10_v2_chr10_+_42860348_42860377	0.498179	Rfx3_Rfx1_Rfx4	ENSMUST00000063063.7|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr7_+_28179469_28179535	0.496457	Rfx3_Rfx1_Rfx4	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chrX_+_153359613_153359613	0.492591	Rfx3_Rfx1_Rfx4	ENSMUST00000039545.4|Klf8|ENSMUSG00000041649.7|Kruppel-like factor 8
mm10_v2_chr9_+_44398176_44398176	0.492366	Rfx3_Rfx1_Rfx4	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr7_+_30232032_30232050	0.490998	Rfx3_Rfx1_Rfx4	ENSMUST00000149654.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr2_+_119288725_119288771	0.490124	Rfx3_Rfx1_Rfx4	ENSMUST00000037280.4|Vps18|ENSMUSG00000034216.6|vacuolar protein sorting 18 (yeast)
mm10_v2_chr15_+_78428650_78428671	0.488329	Rfx3_Rfx1_Rfx4	ENSMUST00000159771.1|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17
mm10_v2_chr2_+_91922178_91922194	0.487499	Rfx3_Rfx1_Rfx4	ENSMUST00000170432.1|Chrm4|ENSMUSG00000040495.3|cholinergic receptor, muscarinic 4
mm10_v2_chr3_-_89214329_89214372	0.461063	Rfx3_Rfx1_Rfx4	ENSMUST00000118964.2|Mtx1|ENSMUSG00000064068.7|metaxin 1
mm10_v2_chr5_+_135632618_135632647	0.453881	Rfx3_Rfx1_Rfx4	ENSMUST00000043707.6|Rhbdd2|ENSMUSG00000039917.6|rhomboid domain containing 2
mm10_v2_chr8_+_123332676_123332740	0.449476	Rfx3_Rfx1_Rfx4	ENSMUST00000010298.6|Spire2|ENSMUSG00000010154.6|spire homolog 2 (Drosophila)
mm10_v2_chr12_-_32061221_32061301	0.449358	Rfx3_Rfx1_Rfx4	ENSMUST00000003079.5|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta 	ENSMUST00000036497.9|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta
mm10_v2_chr11_+_88047302_88047373	0.447955	Rfx3_Rfx1_Rfx4	ENSMUST00000139129.2|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr12_-_85374696_85374719	0.44479	Rfx3_Rfx1_Rfx4	ENSMUST00000040766.7|Tmed10|ENSMUSG00000021248.8|transmembrane emp24-like trafficking protein 10 (yeast)
mm10_v2_chr11_+_115163333_115163348	0.443342	Rfx3_Rfx1_Rfx4	ENSMUST00000021077.3|Slc9a3r1|ENSMUSG00000020733.3|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1
mm10_v2_chr4_-_121017201_121017261	0.4399	Rfx3_Rfx1_Rfx4	ENSMUST00000043200.7|Smap2|ENSMUSG00000032870.8|small ArfGAP 2
mm10_v2_chr10_-_80900749_80900969	0.436067	Rfx3_Rfx1_Rfx4	ENSMUST00000020440.6|Timm13|ENSMUSG00000020219.6|translocase of inner mitochondrial membrane 13
mm10_v2_chr10_-_75764265_75764359	0.435937	Rfx3_Rfx1_Rfx4	ENSMUST00000001712.6|Cabin1|ENSMUSG00000020196.9|calcineurin binding protein 1
mm10_v2_chr3_-_108085346_108085412	0.428217	Rfx3_Rfx1_Rfx4	ENSMUST00000078912.5|Ampd2|ENSMUSG00000027889.11|adenosine monophosphate deaminase 2
mm10_v2_chr2_+_119972699_119972746	0.427724	Rfx3_Rfx1_Rfx4	ENSMUST00000066058.7|Mapkbp1|ENSMUSG00000033902.11|mitogen-activated protein kinase binding protein 1
mm10_v2_chr9_-_59036387_59036460	0.426661	Rfx3_Rfx1_Rfx4	ENSMUST00000068664.5|Neo1|ENSMUSG00000032340.7|neogenin
mm10_v2_chr10_-_89732253_89732324	0.426325	Rfx3_Rfx1_Rfx4	ENSMUST00000020109.3|Actr6|ENSMUSG00000019948.3|ARP6 actin-related protein 6
mm10_v2_chr17_+_85621017_85621031	0.425267	Rfx3_Rfx1_Rfx4	ENSMUST00000162695.2|Six3|ENSMUSG00000038805.9|sine oculis-related homeobox 3
mm10_v2_chr2_-_92024502_92024529	0.424715	Rfx3_Rfx1_Rfx4	ENSMUST00000028663.4|Creb3l1|ENSMUSG00000027230.9|cAMP responsive element binding protein 3-like 1
mm10_v2_chr19_+_45560569_45560644	0.421273	Rfx3_Rfx1_Rfx4	ENSMUST00000047057.7|Dpcd|ENSMUSG00000041035.7|deleted in primary ciliary dyskinesia
mm10_v2_chr12_+_84361968_84362018	0.420032	Rfx3_Rfx1_Rfx4	ENSMUST00000021661.6|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr18_+_63708689_63708730	0.417714	Rfx3_Rfx1_Rfx4	ENSMUST00000072726.5|Wdr7|ENSMUSG00000040560.9|WD repeat domain 7
mm10_v2_chr8_+_36993551_36993611	0.417661	Rfx3_Rfx1_Rfx4	ENSMUST00000098825.3|AI429214|ENSMUSG00000074384.3|expressed sequence AI429214
mm10_v2_chrX_+_7884244_7884313	0.417302	Rfx3_Rfx1_Rfx4	ENSMUST00000115663.3|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr17_+_12119274_12119348	0.415437	Rfx3_Rfx1_Rfx4	ENSMUST00000024594.2|Agpat4|ENSMUSG00000023827.2|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm10_v2_chr8_-_69890967_69890967	0.414891	Rfx3_Rfx1_Rfx4	ENSMUST00000152938.1|Yjefn3|ENSMUSG00000048967.9|YjeF N-terminal domain containing 3
mm10_v2_chr17_-_6655939_6655939	0.414827	Rfx3_Rfx1_Rfx4	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr6_-_128424883_128424935	0.414826	Rfx3_Rfx1_Rfx4	ENSMUST00000001559.8|Itfg2|ENSMUSG00000001518.10|integrin alpha FG-GAP repeat containing 2
mm10_v2_chr15_+_79229363_79229439	0.412897	Rfx3_Rfx1_Rfx4	ENSMUST00000018295.7|Pick1|ENSMUSG00000068206.6|protein interacting with C kinase 1 	ENSMUST00000053926.5|Pick1|ENSMUSG00000068206.6|protein interacting with C kinase 1
mm10_v2_chr4_-_149774238_149774279	0.412654	Rfx3_Rfx1_Rfx4	ENSMUST00000105686.2|Slc25a33|ENSMUSG00000028982.9|solute carrier family 25, member 33
mm10_v2_chr4_+_138972885_138972920	0.408357	Rfx3_Rfx1_Rfx4	ENSMUST00000123636.1|Tmco4|ENSMUSG00000041143.10|transmembrane and coiled-coil domains 4 	ENSMUST00000043042.3|Tmco4|ENSMUSG00000041143.10|transmembrane and coiled-coil domains 4 	ENSMUST00000050949.2|Tmco4|ENSMUSG00000041143.10|transmembrane and coiled-coil domains 4
mm10_v2_chr11_-_105944128_105944223	0.405626	Rfx3_Rfx1_Rfx4	ENSMUST00000184086.1|Cyb561|ENSMUSG00000019590.10|cytochrome b-561
mm10_v2_chr17_+_34837172_34837248	0.402487	Rfx3_Rfx1_Rfx4	ENSMUST00000173995.1|Dxo|ENSMUSG00000040482.9|decapping exoribonuclease
mm10_v2_chr18_+_64887690_64887762	0.400426	Rfx3_Rfx1_Rfx4	ENSMUST00000163516.1|Nedd4l|ENSMUSG00000024589.9|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm10_v2_chr17_-_87446854_87446935	0.398719	Rfx3_Rfx1_Rfx4	ENSMUST00000040440.6|Calm2|ENSMUSG00000036438.6|calmodulin 2
mm10_v2_chr3_-_95133989_95134017	0.396653	Rfx3_Rfx1_Rfx4	ENSMUST00000172572.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1 	ENSMUST00000173462.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1
mm10_v2_chr7_+_139834148_139834174	0.396429	Rfx3_Rfx1_Rfx4	ENSMUST00000026548.7|Gpr123|ENSMUSG00000025475.11|G protein-coupled receptor 123
mm10_v2_chr4_-_152477433_152477549	0.396315	Rfx3_Rfx1_Rfx4	ENSMUST00000159186.1|Kcnab2|ENSMUSG00000028931.5|potassium voltage-gated channel, shaker-related subfamily, beta member 2 	ENSMUST00000162017.1|Kcnab2|ENSMUSG00000028931.5|potassium voltage-gated channel, shaker-related subfamily, beta member 2 	ENSMUST00000030768.2|Kcnab2|ENSMUSG00000028931.5|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm10_v2_chr15_-_83122756_83122801	0.390546	Rfx3_Rfx1_Rfx4	ENSMUST00000018184.3|Rrp7a|ENSMUSG00000018040.3|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm10_v2_chr16_-_3907651_3907707	0.38755	Rfx3_Rfx1_Rfx4	ENSMUST00000177221.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene 	ENSMUST00000177323.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr4_+_57434247_57434368	0.386539	Rfx3_Rfx1_Rfx4	ENSMUST00000102905.1|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chr14_-_31001311_31001389	0.383322	Rfx3_Rfx1_Rfx4	ENSMUST00000161219.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae) 	ENSMUST00000182501.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae)
mm10_v2_chr14_-_55635602_55635718	0.383034	Rfx3_Rfx1_Rfx4	ENSMUST00000047131.9|Ipo4|ENSMUSG00000002319.9|importin 4
mm10_v2_chr10_-_80742211_80742280	0.377144	Rfx3_Rfx1_Rfx4	ENSMUST00000020420.7|Ap3d1|ENSMUSG00000020198.7|adaptor-related protein complex 3, delta 1 subunit
mm10_v2_chr6_+_83156401_83156451	0.375446	Rfx3_Rfx1_Rfx4	ENSMUST00000032106.4|1700003E16Rik|ENSMUSG00000030030.4|RIKEN cDNA 1700003E16 gene
mm10_v2_chr13_-_34002740_34002783	0.374331	Rfx3_Rfx1_Rfx4	ENSMUST00000167237.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000168400.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm10_v2_chr2_+_129129700_129129791	0.372536	Rfx3_Rfx1_Rfx4	ENSMUST00000035481.4|Chchd5|ENSMUSG00000037938.4|coiled-coil-helix-coiled-coil-helix domain containing 5
mm10_v2_chr10_-_128547722_128547774	0.372311	Rfx3_Rfx1_Rfx4	ENSMUST00000040572.3|Zc3h10|ENSMUSG00000039810.5|zinc finger CCCH type containing 10
mm10_v2_chr19_+_10577439_10577461	0.367643	Rfx3_Rfx1_Rfx4	ENSMUST00000168445.1|Cyb561a3|ENSMUSG00000034445.7|cytochrome b561 family, member A3
mm10_v2_chr17_-_34118476_34118522	0.367141	Rfx3_Rfx1_Rfx4	ENSMUST00000095347.5|Brd2|ENSMUSG00000024335.13|bromodomain containing 2
mm10_v2_chr9_-_122950960_122951006	0.367086	Rfx3_Rfx1_Rfx4	ENSMUST00000035154.3|1110059G10Rik|ENSMUSG00000032551.6|RIKEN cDNA 1110059G10 gene
mm10_v2_chr11_+_78536393_78536492	0.36688	Rfx3_Rfx1_Rfx4	ENSMUST00000050366.8|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20 	ENSMUST00000108275.1|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20
mm10_v2_chr18_-_23041641_23041671	0.36501	Rfx3_Rfx1_Rfx4	ENSMUST00000097651.3|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr16_-_21694570_21694665	0.362535	Rfx3_Rfx1_Rfx4	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr5_+_118027743_118027800	0.362531	Rfx3_Rfx1_Rfx4	ENSMUST00000031304.7|Tesc|ENSMUSG00000029359.7|tescalcin
mm10_v2_chr7_+_4740111_4740120	0.359342	Rfx3_Rfx1_Rfx4	ENSMUST00000098853.2|Suv420h2|ENSMUSG00000059851.9|suppressor of variegation 4-20 homolog 2 (Drosophila)
mm10_v2_chr17_+_78937124_78937183	0.358939	Rfx3_Rfx1_Rfx4	ENSMUST00000024887.4|Ndufaf7|ENSMUSG00000024082.4|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7
mm10_v2_chr4_+_134102581_134102618	0.356944	Rfx3_Rfx1_Rfx4	ENSMUST00000074690.4|Ubxn11|ENSMUSG00000012126.10|UBX domain protein 11 	ENSMUST00000070246.2|Ubxn11|ENSMUSG00000012126.10|UBX domain protein 11 	ENSMUST00000156750.1|Ubxn11|ENSMUSG00000012126.10|UBX domain protein 11
mm10_v2_chr7_+_28180272_28180316	0.355986	Rfx3_Rfx1_Rfx4	ENSMUST00000173223.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr4_+_152478142_152478183	0.353854	Rfx3_Rfx1_Rfx4	ENSMUST00000081393.3|Nphp4|ENSMUSG00000039577.11|nephronophthisis 4 (juvenile) homolog (human)
mm10_v2_chr1_+_86154752_86154821	0.352637	Rfx3_Rfx1_Rfx4	ENSMUST00000113309.2|Armc9|ENSMUSG00000062590.7|armadillo repeat containing 9 	ENSMUST00000027434.8|Armc9|ENSMUSG00000062590.7|armadillo repeat containing 9 	ENSMUST00000131412.1|Armc9|ENSMUSG00000062590.7|armadillo repeat containing 9
mm10_v2_chr7_+_19149722_19149844	0.352387	Rfx3_Rfx1_Rfx4	ENSMUST00000049294.2|Snrpd2|ENSMUSG00000040824.2|small nuclear ribonucleoprotein D2
mm10_v2_chr6_-_90428401_90428480	0.352153	Rfx3_Rfx1_Rfx4	ENSMUST00000062750.5|Ccdc37|ENSMUSG00000048794.8|coiled-coil domain containing 37 	ENSMUST00000165673.1|Ccdc37|ENSMUSG00000048794.8|coiled-coil domain containing 37
mm10_v2_chr15_-_75678732_75678805	0.351827	Rfx3_Rfx1_Rfx4	ENSMUST00000000958.8|Top1mt|ENSMUSG00000000934.8|DNA topoisomerase 1, mitochondrial
mm10_v2_chr12_-_21417591_21417637	0.351675	Rfx3_Rfx1_Rfx4	ENSMUST00000135088.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr2_+_36136384_36136428	0.350319	Rfx3_Rfx1_Rfx4	ENSMUST00000028250.2|Mrrf|ENSMUSG00000026887.3|mitochondrial ribosome recycling factor
mm10_v2_chr7_+_30232310_30232350	0.345499	Rfx3_Rfx1_Rfx4	ENSMUST00000108193.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I 	ENSMUST00000108192.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chrX_+_7884022_7884055	0.344127	Rfx3_Rfx1_Rfx4	ENSMUST00000115660.4|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr7_-_121981669_121981711	0.339051	Rfx3_Rfx1_Rfx4	ENSMUST00000057576.7|Cog7|ENSMUSG00000034951.9|component of oligomeric golgi complex 7
mm10_v2_chr17_+_28177339_28177449	0.338902	Rfx3_Rfx1_Rfx4	ENSMUST00000073534.2|Zfp523|ENSMUSG00000024220.7|zinc finger protein 523 	ENSMUST00000002318.1|Zfp523|ENSMUSG00000024220.7|zinc finger protein 523
mm10_v2_chr11_+_120467635_120467719	0.33862	Rfx3_Rfx1_Rfx4	ENSMUST00000140862.1|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate 	ENSMUST00000106205.1|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate 	ENSMUST00000106203.1|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate 	ENSMUST00000026900.7|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate
mm10_v2_chr7_+_140881898_140881968	0.338493	Rfx3_Rfx1_Rfx4	ENSMUST00000026560.7|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr4_+_110397764_110397808	0.335696	Rfx3_Rfx1_Rfx4	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chrX_+_7884321_7884378	0.335695	Rfx3_Rfx1_Rfx4	ENSMUST00000096514.3|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2 	ENSMUST00000123277.1|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr9_+_107563246_107563285	0.335254	Rfx3_Rfx1_Rfx4	ENSMUST00000010198.3|Tusc2|ENSMUSG00000010054.3|tumor suppressor candidate 2
mm10_v2_chr9_-_51102062_51102085	0.334608	Rfx3_Rfx1_Rfx4	ENSMUST00000170947.1|4833427G06Rik|ENSMUSG00000032057.8|RIKEN cDNA 4833427G06 gene
mm10_v2_chr5_+_35583018_35583110	0.332698	Rfx3_Rfx1_Rfx4	ENSMUST00000068947.7|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl 	ENSMUST00000114237.1|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl 	ENSMUST00000156125.1|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl 	ENSMUST00000068563.5|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl
mm10_v2_chr17_+_33555719_33555796	0.332609	Rfx3_Rfx1_Rfx4	ENSMUST00000087605.5|Myo1f|ENSMUSG00000024300.10|myosin IF 	ENSMUST00000174695.1|Myo1f|ENSMUSG00000024300.10|myosin IF
mm10_v2_chr17_-_56074932_56075036	0.332142	Rfx3_Rfx1_Rfx4	ENSMUST00000019722.5|Ubxn6|ENSMUSG00000019578.5|UBX domain protein 6
mm10_v2_chr9_+_46012822_46013000	0.332102	Rfx3_Rfx1_Rfx4	ENSMUST00000120463.2|Sik3|ENSMUSG00000034135.8|SIK family kinase 3 	ENSMUST00000120247.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr18_+_36348653_36348728	0.331812	Rfx3_Rfx1_Rfx4	ENSMUST00000050584.3|Cystm1|ENSMUSG00000046727.6|cysteine-rich transmembrane module containing 1
mm10_v2_chr16_+_78301458_78301496	0.329766	Rfx3_Rfx1_Rfx4	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr16_+_96235801_96235801	0.326041	Rfx3_Rfx1_Rfx4	ENSMUST00000113800.2|B3galt5|ENSMUSG00000074892.3|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm10_v2_chr17_+_28142267_28142321	0.324705	Rfx3_Rfx1_Rfx4	ENSMUST00000043503.3|Scube3|ENSMUSG00000038677.7|signal peptide, CUB domain, EGF-like 3
mm10_v2_chr8_+_105701624_105701693	0.324066	Rfx3_Rfx1_Rfx4	ENSMUST00000093195.6|Pard6a|ENSMUSG00000005699.9|par-6 (partitioning defective 6,) homolog alpha (C. elegans)
mm10_v2_chr7_+_44857309_44857354	0.322909	Rfx3_Rfx1_Rfx4	ENSMUST00000098478.3|Pnkp|ENSMUSG00000002963.10|polynucleotide kinase 3'- phosphatase
mm10_v2_chr17_+_56717759_56717819	0.317991	Rfx3_Rfx1_Rfx4	ENSMUST00000002452.6|Ndufa11|ENSMUSG00000002379.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11
mm10_v2_chr16_-_91069142_91069159	0.316889	Rfx3_Rfx1_Rfx4	ENSMUST00000035689.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene 	ENSMUST00000114076.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene
mm10_v2_chr7_+_126487344_126487390	0.315958	Rfx3_Rfx1_Rfx4	ENSMUST00000098048.4|Tufm|ENSMUSG00000073838.4|Tu translation elongation factor, mitochondrial 	ENSMUST00000106392.3|Tufm|ENSMUSG00000073838.4|Tu translation elongation factor, mitochondrial
mm10_v2_chr16_+_35770382_35770396	0.312215	Rfx3_Rfx1_Rfx4	ENSMUST00000023555.4|Hspbap1|ENSMUSG00000022849.4|Hspb associated protein 1
mm10_v2_chr2_+_163017354_163017513	0.309946	Rfx3_Rfx1_Rfx4	ENSMUST00000018002.6|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52 	ENSMUST00000150396.1|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52
mm10_v2_chr15_-_79658889_79658956	0.304161	Rfx3_Rfx1_Rfx4	ENSMUST00000109648.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A 	ENSMUST00000046816.6|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr4_+_123016590_123016613	0.302679	Rfx3_Rfx1_Rfx4	ENSMUST00000102649.3|Trit1|ENSMUSG00000028653.10|tRNA isopentenyltransferase 1
mm10_v2_chr9_+_108002501_108002680	0.302079	Rfx3_Rfx1_Rfx4	ENSMUST00000035214.4|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1 	ENSMUST00000175874.1|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1
mm10_v2_chr10_-_82690608_82690650	0.299303	Rfx3_Rfx1_Rfx4	ENSMUST00000065815.6|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2 	ENSMUST00000020485.3|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2
mm10_v2_chr18_+_36348739_36348779	0.297976	Rfx3_Rfx1_Rfx4	ENSMUST00000152804.2|Cystm1|ENSMUSG00000046727.6|cysteine-rich transmembrane module containing 1
mm10_v2_chr1_+_74362108_74362156	0.297791	Rfx3_Rfx1_Rfx4	ENSMUST00000097697.1|Gm216|ENSMUSG00000073650.2|predicted gene 216
mm10_v2_chr10_+_87859062_87859094	0.294768	Rfx3_Rfx1_Rfx4	ENSMUST00000095360.4|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr8_-_71381907_71381977	0.294625	Rfx3_Rfx1_Rfx4	ENSMUST00000002466.8|Nr2f6|ENSMUSG00000002393.8|nuclear receptor subfamily 2, group F, member 6
mm10_v2_chr2_-_109280718_109280767	0.293671	Rfx3_Rfx1_Rfx4	ENSMUST00000147770.1|Mettl15|ENSMUSG00000057234.3|methyltransferase like 15
mm10_v2_chr2_-_134644125_134644145	0.292878	Rfx3_Rfx1_Rfx4	ENSMUST00000038228.4|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr17_-_34850162_34850210	0.291464	Rfx3_Rfx1_Rfx4	ENSMUST00000046022.9|Skiv2l|ENSMUSG00000040356.10|superkiller viralicidic activity 2-like (S. cerevisiae)
mm10_v2_chr15_-_78174090_78174109	0.288886	Rfx3_Rfx1_Rfx4	ENSMUST00000016781.6|Ift27|ENSMUSG00000016637.6|intraflagellar transport 27
mm10_v2_chr9_-_109059216_109059259	0.281922	Rfx3_Rfx1_Rfx4	ENSMUST00000112053.1|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr15_-_75841907_75841932	0.275719	Rfx3_Rfx1_Rfx4	ENSMUST00000100538.2|Zc3h3|ENSMUSG00000075600.2|zinc finger CCCH type containing 3
mm10_v2_chr8_+_110266960_110266982	0.275547	Rfx3_Rfx1_Rfx4	ENSMUST00000043141.6|Hydin|ENSMUSG00000059854.7|HYDIN, axonemal central pair apparatus protein
mm10_v2_chrX_-_122397351_122397425	0.274137	Rfx3_Rfx1_Rfx4	ENSMUST00000079490.4|Nap1l3|ENSMUSG00000055733.5|nucleosome assembly protein 1-like 3
mm10_v2_chr2_-_121271315_121271322	0.27324	Rfx3_Rfx1_Rfx4	ENSMUST00000131245.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr12_+_84362029_84362064	0.273177	Rfx3_Rfx1_Rfx4	ENSMUST00000110278.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast) 	ENSMUST00000145522.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr15_+_59315030_59315087	0.272548	Rfx3_Rfx1_Rfx4	ENSMUST00000022977.7|Sqle|ENSMUSG00000022351.8|squalene epoxidase
mm10_v2_chr2_-_3332566_3332650	0.270889	Rfx3_Rfx1_Rfx4	ENSMUST00000062672.6|Rpp38|ENSMUSG00000049950.6|ribonuclease P/MRP 38 subunit
mm10_v2_chr15_+_103272893_103272911	0.269975	Rfx3_Rfx1_Rfx4	ENSMUST00000100162.3|Copz1|ENSMUSG00000060992.8|coatomer protein complex, subunit zeta 1
mm10_v2_chr7_+_28180226_28180266	0.26598	Rfx3_Rfx1_Rfx4	ENSMUST00000172467.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr11_-_101425330_101425388	0.263128	Rfx3_Rfx1_Rfx4	ENSMUST00000103102.3|Ptges3l|ENSMUSG00000097487.1|prostaglandin E synthase 3 (cytosolic)-like
mm10_v2_chr2_+_152427639_152427699	0.262895	Rfx3_Rfx1_Rfx4	ENSMUST00000128737.1|6820408C15Rik|ENSMUSG00000032680.5|RIKEN cDNA 6820408C15 gene
mm10_v2_chr12_+_72939724_72939758	0.262763	Rfx3_Rfx1_Rfx4	ENSMUST00000021519.5|Six6|ENSMUSG00000021099.5|sine oculis-related homeobox 6
mm10_v2_chr11_+_3895223_3895310	0.260841	Rfx3_Rfx1_Rfx4	ENSMUST00000055931.4|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18 	ENSMUST00000109996.1|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18
mm10_v2_chr3_+_90079540_90079715	0.260312	Rfx3_Rfx1_Rfx4	ENSMUST00000029549.9|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000118566.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000119158.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma
mm10_v2_chr2_-_121271341_121271397	0.257502	Rfx3_Rfx1_Rfx4	ENSMUST00000110647.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr5_-_140702241_140702378	0.254295	Rfx3_Rfx1_Rfx4	ENSMUST00000077890.5|Iqce|ENSMUSG00000036555.8|IQ motif containing E 	ENSMUST00000041783.7|Iqce|ENSMUSG00000036555.8|IQ motif containing E 	ENSMUST00000142081.1|Iqce|ENSMUSG00000036555.8|IQ motif containing E
mm10_v2_chr9_+_62858085_62858138	0.253973	Rfx3_Rfx1_Rfx4	ENSMUST00000034777.6|Calml4|ENSMUSG00000032246.7|calmodulin-like 4 	ENSMUST00000163820.1|Calml4|ENSMUSG00000032246.7|calmodulin-like 4
mm10_v2_chr2_-_163645125_163645136	0.250064	Rfx3_Rfx1_Rfx4	ENSMUST00000017851.3|Serinc3|ENSMUSG00000017707.9|serine incorporator 3
mm10_v2_chr17_+_33920522_33920554	0.249049	Rfx3_Rfx1_Rfx4	ENSMUST00000172489.1|Tapbp|ENSMUSG00000024308.8|TAP binding protein
mm10_v2_chr16_+_17646564_17646620	0.243291	Rfx3_Rfx1_Rfx4	ENSMUST00000182117.1|Ccdc74a|ENSMUSG00000041617.4|coiled-coil domain containing 74A 	ENSMUST00000182671.1|Ccdc74a|ENSMUSG00000041617.4|coiled-coil domain containing 74A 	ENSMUST00000182344.1|Ccdc74a|ENSMUSG00000041617.4|coiled-coil domain containing 74A
mm10_v2_chr11_-_97629685_97629716	0.239995	Rfx3_Rfx1_Rfx4	ENSMUST00000052281.4|E130012A19Rik|ENSMUSG00000043439.4|RIKEN cDNA E130012A19 gene
mm10_v2_chr1_-_75180349_75180407	0.236893	Rfx3_Rfx1_Rfx4	ENSMUST00000027396.8|Abcb6|ENSMUSG00000026198.9|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm10_v2_chr2_-_18998126_18998202	0.233935	Rfx3_Rfx1_Rfx4	ENSMUST00000006912.5|Pip4k2a|ENSMUSG00000026737.6|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
mm10_v2_chr2_-_167060417_167060430	0.232454	Rfx3_Rfx1_Rfx4	ENSMUST00000155281.1|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr6_-_91473361_91473470	0.230426	Rfx3_Rfx1_Rfx4	ENSMUST00000040835.7|Chchd4|ENSMUSG00000034203.7|coiled-coil-helix-coiled-coil-helix domain containing 4
mm10_v2_chr4_+_110397661_110397708	0.227569	Rfx3_Rfx1_Rfx4	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr5_+_130187158_130187166	0.227408	Rfx3_Rfx1_Rfx4	ENSMUST00000119027.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000026390.7|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr2_+_85050439_85050500	0.227166	Rfx3_Rfx1_Rfx4	ENSMUST00000111605.2|Tnks1bp1|ENSMUSG00000033955.6|tankyrase 1 binding protein 1
mm10_v2_chr8_+_83666827_83666882	0.226389	Rfx3_Rfx1_Rfx4	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr7_-_80901220_80901269	0.225723	Rfx3_Rfx1_Rfx4	ENSMUST00000146402.1|Wdr73|ENSMUSG00000025722.10|WD repeat domain 73 	ENSMUST00000026816.8|Wdr73|ENSMUSG00000025722.10|WD repeat domain 73
mm10_v2_chr15_-_76126538_76126556	0.225417	Rfx3_Rfx1_Rfx4	ENSMUST00000054022.5|BC024139|ENSMUSG00000044361.9|cDNA sequence BC024139 	ENSMUST00000089654.3|BC024139|ENSMUSG00000044361.9|cDNA sequence BC024139
mm10_v2_chr5_-_122372230_122372390	0.224278	Rfx3_Rfx1_Rfx4	ENSMUST00000031419.5|Fam216a|ENSMUSG00000029463.5|family with sequence similarity 216, member A
mm10_v2_chr10_+_87859255_87859266	0.22205	Rfx3_Rfx1_Rfx4	ENSMUST00000105300.2|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr4_+_126058557_126058613	0.220743	Rfx3_Rfx1_Rfx4	ENSMUST00000035497.4|Oscp1|ENSMUSG00000042616.7|organic solute carrier partner 1
mm10_v2_chr7_+_60155538_60155538	0.219335	Rfx3_Rfx1_Rfx4	ENSMUST00000057611.4|Gm7367|ENSMUSG00000047370.4|predicted pseudogene 7367
mm10_v2_chr4_-_155086271_155086379	0.218382	Rfx3_Rfx1_Rfx4	ENSMUST00000030914.3|Rer1|ENSMUSG00000029048.3|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)
mm10_v2_chrX_+_72918557_72918612	0.217284	Rfx3_Rfx1_Rfx4	ENSMUST00000033715.4|Nsdhl|ENSMUSG00000031349.4|NAD(P) dependent steroid dehydrogenase-like
mm10_v2_chr5_+_30281377_30281447	0.216532	Rfx3_Rfx1_Rfx4	ENSMUST00000101448.3|Drc1|ENSMUSG00000073102.3|dynein regulatory complex subunit 1
mm10_v2_chr14_-_25927250_25927250	0.215388	Rfx3_Rfx1_Rfx4	ENSMUST00000100811.5|Tmem254a|ENSMUSG00000072676.5|transmembrane protein 254a
mm10_v2_chr13_+_108158723_108158754	0.214898	Rfx3_Rfx1_Rfx4	ENSMUST00000054835.8|Ercc8|ENSMUSG00000021694.12|excision repaiross-complementing rodent repair deficiency, complementation group 8 	ENSMUST00000120672.1|Ercc8|ENSMUSG00000021694.12|excision repaiross-complementing rodent repair deficiency, complementation group 8
mm10_v2_chr10_+_77259280_77259348	0.213543	Rfx3_Rfx1_Rfx4	ENSMUST00000020493.7|Pofut2|ENSMUSG00000020260.8|protein O-fucosyltransferase 2
mm10_v2_chr8_+_110217948_110218004	0.21246	Rfx3_Rfx1_Rfx4	ENSMUST00000056972.4|Cmtr2|ENSMUSG00000046441.4|cap methyltransferase 2
mm10_v2_chr7_-_126583177_126583255	0.206484	Rfx3_Rfx1_Rfx4	ENSMUST00000098036.2|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) 	ENSMUST00000032962.4|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm10_v2_chr6_-_119330668_119330694	0.201901	Rfx3_Rfx1_Rfx4	ENSMUST00000112756.1|Lrtm2|ENSMUSG00000055003.8|leucine-rich repeats and transmembrane domains 2
mm10_v2_chr17_+_24896488_24896530	0.201197	Rfx3_Rfx1_Rfx4	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr4_+_86930691_86930713	0.199885	Rfx3_Rfx1_Rfx4	ENSMUST00000164590.1|Acer2|ENSMUSG00000091609.1|alkaline ceramidase 2
mm10_v2_chr6_+_113392417_113392497	0.197108	Rfx3_Rfx1_Rfx4	ENSMUST00000032414.4|Ttll3|ENSMUSG00000030276.13|tubulin tyrosine ligase-like family, member 3 	ENSMUST00000038889.5|Ttll3|ENSMUSG00000030276.13|tubulin tyrosine ligase-like family, member 3
mm10_v2_chr7_+_101321079_101321134	0.194232	Rfx3_Rfx1_Rfx4	ENSMUST00000032927.7|Stard10|ENSMUSG00000030688.8|START domain containing 10
mm10_v2_chr5_+_136919137_136919188	0.194203	Rfx3_Rfx1_Rfx4	ENSMUST00000181045.1|4933404O12Rik|ENSMUSG00000097908.1|RIKEN cDNA 4933404O12 gene
mm10_v2_chr19_-_4125837_4125863	0.191269	Rfx3_Rfx1_Rfx4	ENSMUST00000121402.1|Aip|ENSMUSG00000024847.8|aryl-hydrocarbon receptor-interacting protein 	ENSMUST00000117831.1|Aip|ENSMUSG00000024847.8|aryl-hydrocarbon receptor-interacting protein
mm10_v2_chr18_-_61176994_61177057	0.19118	Rfx3_Rfx1_Rfx4	ENSMUST00000091884.4|Hmgxb3|ENSMUSG00000024622.7|HMG box domain containing 3
mm10_v2_chr1_-_124045523_124045571	0.189364	Rfx3_Rfx1_Rfx4	ENSMUST00000112606.1|Dpp10|ENSMUSG00000036815.10|dipeptidylpeptidase 10
mm10_v2_chr6_-_88518760_88518905	0.185575	Rfx3_Rfx1_Rfx4	ENSMUST00000032168.5|Sec61a1|ENSMUSG00000030082.8|Sec61 alpha 1 subunit (S. cerevisiae)
mm10_v2_chr9_+_72958785_72958850	0.185568	Rfx3_Rfx1_Rfx4	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chr6_-_122339627_122339708	0.185454	Rfx3_Rfx1_Rfx4	ENSMUST00000161210.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila) 	ENSMUST00000161054.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila) 	ENSMUST00000159252.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila) 	ENSMUST00000161739.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila) 	ENSMUST00000161149.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr7_-_28598140_28598185	0.183597	Rfx3_Rfx1_Rfx4	ENSMUST00000040531.8|Samd4b|ENSMUSG00000037513.9|sterile alpha motif domain containing 4B 	ENSMUST00000108283.1|Pak4|ENSMUSG00000030602.6|p21 protein (Cdc42/Rac)-activated kinase 4
mm10_v2_chr1_-_36445248_36445271	0.18192	Rfx3_Rfx1_Rfx4	ENSMUST00000125304.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like 	ENSMUST00000115011.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like
mm10_v2_chr13_-_34002784_34002812	0.181884	Rfx3_Rfx1_Rfx4	ENSMUST00000166354.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000076532.7|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000171034.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm10_v2_chr6_-_136875794_136875811	0.181378	Rfx3_Rfx1_Rfx4	ENSMUST00000032342.1|Mgp|ENSMUSG00000030218.1|matrix Gla protein
mm10_v2_chr5_+_136908130_136908174	0.181321	Rfx3_Rfx1_Rfx4	ENSMUST00000008131.8|Rabl5|ENSMUSG00000007987.8|RAB, member of RAS oncogene family-like 5
mm10_v2_chr10_-_79746553_79746586	0.180902	Rfx3_Rfx1_Rfx4	ENSMUST00000020580.6|Polrmt|ENSMUSG00000020329.6|polymerase (RNA) mitochondrial (DNA directed) 	ENSMUST00000159016.1|Polrmt|ENSMUSG00000020329.6|polymerase (RNA) mitochondrial (DNA directed)
mm10_v2_chr2_+_32757234_32757319	0.180602	Rfx3_Rfx1_Rfx4	ENSMUST00000009707.7|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000177382.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000140999.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A
mm10_v2_chr3_+_156562141_156562196	0.180277	Rfx3_Rfx1_Rfx4	ENSMUST00000175773.1|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr3_+_156561792_156561869	0.178734	Rfx3_Rfx1_Rfx4	ENSMUST00000074015.4|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr12_+_105032638_105032705	0.177437	Rfx3_Rfx1_Rfx4	ENSMUST00000021522.3|Glrx5|ENSMUSG00000021102.3|glutaredoxin 5 homolog (S. cerevisiae)
mm10_v2_chr8_-_34965631_34965714	0.176153	Rfx3_Rfx1_Rfx4	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr4_-_141664063_141664170	0.175946	Rfx3_Rfx1_Rfx4	ENSMUST00000084203.4|Plekhm2|ENSMUSG00000028917.8|pleckstrin homology domain containing, family M (with RUN domain) member 2
mm10_v2_chr10_+_84917616_84917656	0.175867	Rfx3_Rfx1_Rfx4	ENSMUST00000038523.7|Ric8b|ENSMUSG00000035620.8|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) 	ENSMUST00000095385.3|Ric8b|ENSMUSG00000035620.8|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)
mm10_v2_chr4_+_155086577_155086610	0.175502	Rfx3_Rfx1_Rfx4	ENSMUST00000030915.4|Morn1|ENSMUSG00000029049.8|MORN repeat containing 1 	ENSMUST00000155775.1|Morn1|ENSMUSG00000029049.8|MORN repeat containing 1 	ENSMUST00000127457.1|Morn1|ENSMUSG00000029049.8|MORN repeat containing 1
mm10_v2_chr7_+_116504363_116504397	0.171606	Rfx3_Rfx1_Rfx4	ENSMUST00000032895.8|Nucb2|ENSMUSG00000030659.8|nucleobindin 2
mm10_v2_chr10_-_128645965_128645991	0.170511	Rfx3_Rfx1_Rfx4	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr10_-_116950366_116950432	0.170144	Rfx3_Rfx1_Rfx4	ENSMUST00000020375.6|Rab3ip|ENSMUSG00000064181.5|RAB3A interacting protein
mm10_v2_chr17_+_25828791_25828867	0.169671	Rfx3_Rfx1_Rfx4	ENSMUST00000133595.1|Jmjd8|ENSMUSG00000025736.8|jumonji domain containing 8
mm10_v2_chr16_-_36874806_36874862	0.168506	Rfx3_Rfx1_Rfx4	ENSMUST00000075946.5|Eaf2|ENSMUSG00000022838.7|ELL associated factor 2
mm10_v2_chr8_+_124231359_124231450	0.167582	Rfx3_Rfx1_Rfx4	ENSMUST00000034458.8|Galnt2|ENSMUSG00000089704.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm10_v2_chr12_-_21417526_21417588	0.166108	Rfx3_Rfx1_Rfx4	ENSMUST00000049531.9|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 	ENSMUST00000155480.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr9_+_104569671_104569683	0.164281	Rfx3_Rfx1_Rfx4	ENSMUST00000057742.8|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chr2_-_151744142_151744205	0.16405	Rfx3_Rfx1_Rfx4	ENSMUST00000109869.1|Psmf1|ENSMUSG00000032869.9|proteasome (prosome, macropain) inhibitor subunit 1
mm10_v2_chr7_+_18991245_18991319	0.163597	Rfx3_Rfx1_Rfx4	ENSMUST00000130268.1|Mypop|ENSMUSG00000048481.9|Myb-related transcription factor, partner of profilin 	ENSMUST00000059331.8|Mypop|ENSMUSG00000048481.9|Myb-related transcription factor, partner of profilin 	ENSMUST00000131087.1|Mypop|ENSMUSG00000048481.9|Myb-related transcription factor, partner of profilin
mm10_v2_chr3_-_106001474_106001513	0.162861	Rfx3_Rfx1_Rfx4	ENSMUST00000066319.6|Pifo|ENSMUSG00000010136.8|primary cilia formation
mm10_v2_chr17_-_36951338_36951425	0.162235	Rfx3_Rfx1_Rfx4	ENSMUST00000173540.1|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm10_v2_chr11_-_120467414_120467600	0.161757	Rfx3_Rfx1_Rfx4	ENSMUST00000076921.6|Arl16|ENSMUSG00000057594.6|ADP-ribosylation factor-like 16
mm10_v2_chr4_+_126096623_126096708	0.160629	Rfx3_Rfx1_Rfx4	ENSMUST00000055575.7|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10 	ENSMUST00000179323.1|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10 	ENSMUST00000151831.1|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10
mm10_v2_chr11_-_4160286_4160305	0.159963	Rfx3_Rfx1_Rfx4	ENSMUST00000093381.4|Ccdc157|ENSMUSG00000051427.8|coiled-coil domain containing 157 	ENSMUST00000101626.2|Ccdc157|ENSMUSG00000051427.8|coiled-coil domain containing 157
mm10_v2_chr1_-_124045247_124045267	0.159946	Rfx3_Rfx1_Rfx4	ENSMUST00000112603.2|Dpp10|ENSMUSG00000036815.10|dipeptidylpeptidase 10
mm10_v2_chr3_+_156561950_156561993	0.159033	Rfx3_Rfx1_Rfx4	ENSMUST00000041425.5|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1 	ENSMUST00000106065.1|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr10_+_13008442_13008519	0.156944	Rfx3_Rfx1_Rfx4	ENSMUST00000105139.3|Sf3b5|ENSMUSG00000078348.3|splicing factor 3b, subunit 5
mm10_v2_chr10_+_75893398_75893429	0.154755	Rfx3_Rfx1_Rfx4	ENSMUST00000009236.4|Derl3|ENSMUSG00000009092.4|Der1-like domain family, member 3
mm10_v2_chr1_+_180109192_180109265	0.153315	Rfx3_Rfx1_Rfx4	ENSMUST00000143176.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000135056.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr17_+_35979851_35979924	0.149229	Rfx3_Rfx1_Rfx4	ENSMUST00000087200.3|Gnl1|ENSMUSG00000024429.9|guanine nucleotide binding protein-like 1
mm10_v2_chr11_+_22512088_22512088	0.148738	Rfx3_Rfx1_Rfx4	ENSMUST00000059319.7|Tmem17|ENSMUSG00000049904.7|transmembrane protein 17
mm10_v2_chr7_-_125491397_125491413	0.147993	Rfx3_Rfx1_Rfx4	ENSMUST00000138616.1|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chr2_+_163658370_163658510	0.147172	Rfx3_Rfx1_Rfx4	ENSMUST00000164399.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000064703.6|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000099105.2|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000152418.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000126182.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000131228.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma
mm10_v2_chr2_-_119156824_119157034	0.145629	Rfx3_Rfx1_Rfx4	ENSMUST00000135419.1|Rmdn3|ENSMUSG00000070730.5|regulator of microtubule dynamics 3 	ENSMUST00000129351.1|Rmdn3|ENSMUSG00000070730.5|regulator of microtubule dynamics 3 	ENSMUST00000139519.1|Rmdn3|ENSMUSG00000070730.5|regulator of microtubule dynamics 3 	ENSMUST00000094695.5|Rmdn3|ENSMUSG00000070730.5|regulator of microtubule dynamics 3
mm10_v2_chrX_+_151198078_151198140	0.145346	Rfx3_Rfx1_Rfx4	ENSMUST00000184730.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000184392.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000096285.4|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3
mm10_v2_chr19_+_43689672_43689695	0.141556	Rfx3_Rfx1_Rfx4	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr14_-_26066961_26066961	0.141343	Rfx3_Rfx1_Rfx4	ENSMUST00000100818.5|Tmem254c|ENSMUSG00000072680.5|transmembrane protein 254c
mm10_v2_chr6_-_119330723_119330800	0.139692	Rfx3_Rfx1_Rfx4	ENSMUST00000068351.7|Lrtm2|ENSMUSG00000055003.8|leucine-rich repeats and transmembrane domains 2
mm10_v2_chr17_+_25829036_25829120	0.138883	Rfx3_Rfx1_Rfx4	ENSMUST00000026832.7|Jmjd8|ENSMUSG00000025736.8|jumonji domain containing 8 	ENSMUST00000123582.1|Jmjd8|ENSMUSG00000025736.8|jumonji domain containing 8
mm10_v2_chr12_+_84361636_84361657	0.138794	Rfx3_Rfx1_Rfx4	ENSMUST00000110276.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr16_+_4741543_4741592	0.134883	Rfx3_Rfx1_Rfx4	ENSMUST00000120232.1|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2
mm10_v2_chr8_+_71592158_71592291	0.133681	Rfx3_Rfx1_Rfx4	ENSMUST00000034264.4|Pgls|ENSMUSG00000031807.4|6-phosphogluconolactonase 	ENSMUST00000138742.1|Pgls|ENSMUSG00000031807.4|6-phosphogluconolactonase 	ENSMUST00000143441.1|Pgls|ENSMUSG00000031807.4|6-phosphogluconolactonase
mm10_v2_chr10_-_77259223_77259223	0.131842	Rfx3_Rfx1_Rfx4	ENSMUST00000105408.3|Gm10941|ENSMUSG00000078444.3|predicted gene 10941
mm10_v2_chr9_+_104569754_104569793	0.131748	Rfx3_Rfx1_Rfx4	ENSMUST00000077190.6|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chr2_-_121271403_121271410	0.131523	Rfx3_Rfx1_Rfx4	ENSMUST00000110648.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr11_-_97766508_97766574	0.131269	Rfx3_Rfx1_Rfx4	ENSMUST00000107579.1|Cwc25|ENSMUSG00000018541.4|CWC25 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000018685.2|Cwc25|ENSMUSG00000018541.4|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr1_-_128592284_128592307	0.12985	Rfx3_Rfx1_Rfx4	ENSMUST00000052172.6|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4 	ENSMUST00000142893.1|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4
mm10_v2_chr17_+_24696234_24696320	0.12949	Rfx3_Rfx1_Rfx4	ENSMUST00000019464.7|Noxo1|ENSMUSG00000019320.7|NADPH oxidase organizer 1
mm10_v2_chr9_+_108049254_108049339	0.128907	Rfx3_Rfx1_Rfx4	ENSMUST00000112295.2|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B 	ENSMUST00000047947.7|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B
mm10_v2_chr12_+_84409039_84409102	0.127994	Rfx3_Rfx1_Rfx4	ENSMUST00000081828.6|Ccdc176|ENSMUSG00000057265.6|coiled-coil domain containing 176
mm10_v2_chr15_+_59315088_59315128	0.127509	Rfx3_Rfx1_Rfx4	ENSMUST00000100640.4|Sqle|ENSMUSG00000022351.8|squalene epoxidase
mm10_v2_chr5_+_24586721_24586794	0.127482	Rfx3_Rfx1_Rfx4	ENSMUST00000121863.1|Chpf2|ENSMUSG00000038181.10|chondroitin polymerizing factor 2 	ENSMUST00000088295.4|Chpf2|ENSMUSG00000038181.10|chondroitin polymerizing factor 2
mm10_v2_chr7_+_4740137_4740175	0.126815	Rfx3_Rfx1_Rfx4	ENSMUST00000130215.1|Suv420h2|ENSMUSG00000059851.9|suppressor of variegation 4-20 homolog 2 (Drosophila) 	ENSMUST00000108582.3|Suv420h2|ENSMUSG00000059851.9|suppressor of variegation 4-20 homolog 2 (Drosophila)
mm10_v2_chr11_-_29247208_29247409	0.12665	Rfx3_Rfx1_Rfx4	ENSMUST00000020754.3|Ccdc104|ENSMUSG00000020462.8|coiled-coil domain containing 104
mm10_v2_chr1_+_118389058_118389058	0.125956	Rfx3_Rfx1_Rfx4	ENSMUST00000049404.6|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1 	ENSMUST00000070989.7|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1 	ENSMUST00000165223.1|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1 	ENSMUST00000178710.1|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1
mm10_v2_chr7_+_3290553_3290586	0.125825	Rfx3_Rfx1_Rfx4	ENSMUST00000096744.5|Myadm|ENSMUSG00000068566.6|myeloid-associated differentiation marker
mm10_v2_chr18_-_60713389_60713389	0.125232	Rfx3_Rfx1_Rfx4	ENSMUST00000169273.1|Ndst1|ENSMUSG00000054008.8|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm10_v2_chr5_+_134099704_134099760	0.124668	Rfx3_Rfx1_Rfx4	ENSMUST00000016088.8|Gatsl2|ENSMUSG00000015944.8|GATS protein-like 2
mm10_v2_chr9_-_70141484_70141578	0.12312	Rfx3_Rfx1_Rfx4	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chr17_-_36951636_36951741	0.122572	Rfx3_Rfx1_Rfx4	ENSMUST00000040402.7|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11 	ENSMUST00000174711.1|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm10_v2_chr7_+_4740178_4740206	0.118115	Rfx3_Rfx1_Rfx4	ENSMUST00000108583.2|Suv420h2|ENSMUSG00000059851.9|suppressor of variegation 4-20 homolog 2 (Drosophila)
mm10_v2_chr7_-_125491586_125491596	0.117945	Rfx3_Rfx1_Rfx4	ENSMUST00000033006.7|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chr11_+_58171648_58171688	0.116458	Rfx3_Rfx1_Rfx4	ENSMUST00000020820.1|Mrpl22|ENSMUSG00000020514.2|mitochondrial ribosomal protein L22
mm10_v2_chr10_-_128645784_128645826	0.116308	Rfx3_Rfx1_Rfx4	ENSMUST00000065334.3|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr17_-_34024639_34024680	0.115751	Rfx3_Rfx1_Rfx4	ENSMUST00000025183.8|Ring1|ENSMUSG00000024325.8|ring finger protein 1
mm10_v2_chr2_-_30178422_30178473	0.115546	Rfx3_Rfx1_Rfx4	ENSMUST00000100220.4|D2Wsu81e|ENSMUSG00000039660.10|DNA segment, Chr 2, Wayne State University 81, expressed 	ENSMUST00000179795.1|D2Wsu81e|ENSMUSG00000039660.10|DNA segment, Chr 2, Wayne State University 81, expressed
mm10_v2_chr18_+_56707725_56707940	0.110908	Rfx3_Rfx1_Rfx4	ENSMUST00000025486.8|Lmnb1|ENSMUSG00000024590.8|lamin B1
mm10_v2_chr1_+_161142661_161142701	0.109994	Rfx3_Rfx1_Rfx4	ENSMUST00000125018.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr11_-_62731865_62731910	0.106974	Rfx3_Rfx1_Rfx4	ENSMUST00000150336.1|Zfp287|ENSMUSG00000005267.7|zinc finger protein 287
mm10_v2_chr2_-_26380600_26380654	0.10603	Rfx3_Rfx1_Rfx4	ENSMUST00000114115.2|Snapc4|ENSMUSG00000036281.7|small nuclear RNA activating complex, polypeptide 4 	ENSMUST00000035427.4|Snapc4|ENSMUSG00000036281.7|small nuclear RNA activating complex, polypeptide 4
mm10_v2_chr11_+_101552188_101552234	0.104262	Rfx3_Rfx1_Rfx4	ENSMUST00000147239.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1
mm10_v2_chr5_-_28210168_28210179	0.101267	Rfx3_Rfx1_Rfx4	ENSMUST00000117098.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr11_-_77725281_77725294	0.0984016	Rfx3_Rfx1_Rfx4	ENSMUST00000078623.4|Cryba1|ENSMUSG00000000724.10|crystallin, beta A1
mm10_v2_chr10_+_119992962_119993070	0.0979053	Rfx3_Rfx1_Rfx4	ENSMUST00000154238.1|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr10_+_119992916_119992958	0.0971689	Rfx3_Rfx1_Rfx4	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr11_+_75999912_75999946	0.0929774	Rfx3_Rfx1_Rfx4	ENSMUST00000066408.5|1700016K19Rik|ENSMUSG00000053783.5|RIKEN cDNA 1700016K19 gene
mm10_v2_chr4_+_129600670_129600715	0.0921169	Rfx3_Rfx1_Rfx4	ENSMUST00000102591.3|Tmem234|ENSMUSG00000028797.14|transmembrane protein 234 	ENSMUST00000181579.1|Tmem234|ENSMUSG00000028797.14|transmembrane protein 234 	ENSMUST00000173758.1|Tmem234|ENSMUSG00000028797.14|transmembrane protein 234
mm10_v2_chr5_-_122264378_122264460	0.0913306	Rfx3_Rfx1_Rfx4	ENSMUST00000111738.3|Tctn1|ENSMUSG00000038593.12|tectonic family member 1
mm10_v2_chr8_-_122611419_122611487	0.0908512	Rfx3_Rfx1_Rfx4	ENSMUST00000015171.9|Galns|ENSMUSG00000015027.10|galactosamine (N-acetyl)-6-sulfate sulfatase
mm10_v2_chr5_-_28210022_28210034	0.0907001	Rfx3_Rfx1_Rfx4	ENSMUST00000118882.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr7_-_44375006_44375035	0.0896762	Rfx3_Rfx1_Rfx4	ENSMUST00000107933.1|1700008O03Rik|ENSMUSG00000008028.9|RIKEN cDNA 1700008O03 gene
mm10_v2_chr7_-_43313233_43313285	0.0860247	Rfx3_Rfx1_Rfx4	ENSMUST00000012796.7|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715 	ENSMUST00000107986.2|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715
mm10_v2_chr6_-_30509738_30509783	0.085292	Rfx3_Rfx1_Rfx4	ENSMUST00000115160.3|Tmem209|ENSMUSG00000029782.12|transmembrane protein 209
mm10_v2_chr7_+_30563838_30563879	0.0843933	Rfx3_Rfx1_Rfx4	ENSMUST00000163330.1|U2af1l4|ENSMUSG00000078765.4|U2 small nuclear RNA auxiliary factor 1-like 4
mm10_v2_chr4_-_133545906_133546011	0.0841314	Rfx3_Rfx1_Rfx4	ENSMUST00000030665.6|Nudc|ENSMUSG00000028851.6|nuclear distribution gene C homolog (Aspergillus)
mm10_v2_chr5_+_38039224_38039299	0.0825375	Rfx3_Rfx1_Rfx4	ENSMUST00000031008.6|Stx18|ENSMUSG00000029125.8|syntaxin 18 	ENSMUST00000042146.8|Stx18|ENSMUSG00000029125.8|syntaxin 18 	ENSMUST00000154929.1|Stx18|ENSMUSG00000029125.8|syntaxin 18
mm10_v2_chr1_+_93685574_93685694	0.0814904	Rfx3_Rfx1_Rfx4	ENSMUST00000027499.6|Bok|ENSMUSG00000026278.8|BCL2-related ovarian killer protein
mm10_v2_chr6_-_115838412_115838412	0.0787149	Rfx3_Rfx1_Rfx4	ENSMUST00000032468.5|Efcab12|ENSMUSG00000030321.9|EF-hand calcium binding domain 12 	ENSMUST00000184428.1|Efcab12|ENSMUSG00000030321.9|EF-hand calcium binding domain 12
mm10_v2_chr7_+_140882430_140882472	0.0787005	Rfx3_Rfx1_Rfx4	ENSMUST00000164681.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 	ENSMUST00000163610.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr13_-_53377355_53377373	0.0756993	Rfx3_Rfx1_Rfx4	ENSMUST00000021920.6|Sptlc1|ENSMUSG00000021468.7|serine palmitoyltransferase, long chain base subunit 1
mm10_v2_chr1_+_92906959_92907036	0.0755314	Rfx3_Rfx1_Rfx4	ENSMUST00000060913.6|Dusp28|ENSMUSG00000047067.6|dual specificity phosphatase 28
mm10_v2_chr16_-_4523056_4523075	0.0734423	Rfx3_Rfx1_Rfx4	ENSMUST00000090500.3|Srl|ENSMUSG00000022519.7|sarcalumenin 	ENSMUST00000023161.7|Srl|ENSMUSG00000022519.7|sarcalumenin
mm10_v2_chr16_+_14580221_14580221	0.0715659	Rfx3_Rfx1_Rfx4	ENSMUST00000147024.1|A630010A05Rik|ENSMUSG00000075395.4|RIKEN cDNA A630010A05 gene
mm10_v2_chr11_+_78245743_78245821	0.068041	Rfx3_Rfx1_Rfx4	ENSMUST00000002133.8|Sdf2|ENSMUSG00000002064.10|stromal cell derived factor 2
mm10_v2_chr17_+_35879770_35879824	0.0661128	Rfx3_Rfx1_Rfx4	ENSMUST00000025292.8|Dhx16|ENSMUSG00000024422.8|DEAH (Asp-Glu-Ala-His) box polypeptide 16
mm10_v2_chr4_-_141790891_141790931	0.0657547	Rfx3_Rfx1_Rfx4	ENSMUST00000038014.4|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENSMUST00000153880.1|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16
mm10_v2_chr6_-_83156393_83156400	0.0647661	Rfx3_Rfx1_Rfx4	ENSMUST00000153148.1|Wdr54|ENSMUSG00000030032.6|WD repeat domain 54 	ENSMUST00000125894.1|Wdr54|ENSMUSG00000030032.6|WD repeat domain 54
mm10_v2_chr8_+_13705884_13705952	0.0637214	Rfx3_Rfx1_Rfx4	ENSMUST00000166277.1|4932443I19Rik|ENSMUSG00000090336.1|RIKEN cDNA 4932443I19 gene
mm10_v2_chr10_+_39732099_39732140	0.0590134	Rfx3_Rfx1_Rfx4	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr4_+_40722461_40722512	0.0589697	Rfx3_Rfx1_Rfx4	ENSMUST00000030118.3|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1
mm10_v2_chr17_+_43389436_43389497	0.0580792	Rfx3_Rfx1_Rfx4	ENSMUST00000113599.1|Gpr116|ENSMUSG00000056492.5|G protein-coupled receptor 116
mm10_v2_chrX_-_136741155_136741352	0.0570047	Rfx3_Rfx1_Rfx4	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr18_+_77185979_77186048	0.0556322	Rfx3_Rfx1_Rfx4	ENSMUST00000075290.6|St8sia5|ENSMUSG00000025425.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm10_v2_chr7_+_116504409_116504430	0.0487107	Rfx3_Rfx1_Rfx4	ENSMUST00000183175.1|Nucb2|ENSMUSG00000030659.8|nucleobindin 2
mm10_v2_chr8_+_69832633_69832712	0.0420099	Rfx3_Rfx1_Rfx4	ENSMUST00000131637.2|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4 	ENSMUST00000081503.6|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4
mm10_v2_chr5_-_124478330_124478384	0.0409846	Rfx3_Rfx1_Rfx4	ENSMUST00000031347.7|Rilpl2|ENSMUSG00000029401.7|Rab interacting lysosomal protein-like 2
mm10_v2_chr14_-_56778301_56778352	0.0400842	Rfx3_Rfx1_Rfx4	ENSMUST00000022507.5|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1 	ENSMUST00000163924.1|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1
mm10_v2_chr7_+_12978238_12978285	0.0399342	Rfx3_Rfx1_Rfx4	ENSMUST00000108536.1|Zfp446|ENSMUSG00000033961.9|zinc finger protein 446
mm10_v2_chr15_+_9436028_9436083	0.0390119	Rfx3_Rfx1_Rfx4	ENSMUST00000042360.3|Capsl|ENSMUSG00000039676.3|calcyphosine-like
mm10_v2_chr11_+_101279092_101279111	0.0380155	Rfx3_Rfx1_Rfx4	ENSMUST00000103107.4|Cntd1|ENSMUSG00000078653.4|cyclin N-terminal domain containing 1
mm10_v2_chr15_+_75704280_75704394	0.0365822	Rfx3_Rfx1_Rfx4	ENSMUST00000121137.1|Rhpn1|ENSMUSG00000022580.6|rhophilin, Rho GTPase binding protein 1 	ENSMUST00000023244.5|Rhpn1|ENSMUSG00000022580.6|rhophilin, Rho GTPase binding protein 1
mm10_v2_chr9_-_54501496_54501644	0.0321403	Rfx3_Rfx1_Rfx4	ENSMUST00000118600.1|Dmxl2|ENSMUSG00000041268.10|Dmx-like 2 	ENSMUST00000118163.1|Dmxl2|ENSMUSG00000041268.10|Dmx-like 2
mm10_v2_chr12_-_21417356_21417436	0.0320897	Rfx3_Rfx1_Rfx4	ENSMUST00000103002.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr4_-_138725262_138725267	0.031866	Rfx3_Rfx1_Rfx4	ENSMUST00000105811.2|Ubxn10|ENSMUSG00000043621.7|UBX domain protein 10
mm10_v2_chr8_+_119575235_119575340	0.0279675	Rfx3_Rfx1_Rfx4	ENSMUST00000093100.2|Dnaaf1|ENSMUSG00000031831.6|dynein, axonemal assembly factor 1
mm10_v2_chr4_+_6365650_6365720	0.0263408	Rfx3_Rfx1_Rfx4	ENSMUST00000029912.4|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000103008.5|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000175769.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000108374.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000140830.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein
mm10_v2_chr7_-_99141068_99141149	0.0257407	Rfx3_Rfx1_Rfx4	ENSMUST00000037968.8|Uvrag|ENSMUSG00000035354.8|UV radiation resistance associated gene
mm10_v2_chr12_-_55821157_55821195	0.0240782	Rfx3_Rfx1_Rfx4	ENSMUST00000110687.1|Ralgapa1|ENSMUSG00000021027.9|Ral GTPase activating protein, alpha subunit 1 	ENSMUST00000085385.5|Ralgapa1|ENSMUSG00000021027.9|Ral GTPase activating protein, alpha subunit 1
mm10_v2_chr7_+_25681158_25681158	0.0234105	Rfx3_Rfx1_Rfx4	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr13_+_59585259_59585441	0.0165052	Rfx3_Rfx1_Rfx4	ENSMUST00000168367.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000022038.7|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENSMUST00000166923.1|Naa35|ENSMUSG00000021555.8|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm10_v2_chr18_-_70530138_70530284	0.015868	Rfx3_Rfx1_Rfx4	ENSMUST00000161542.1|Poli|ENSMUSG00000038425.11|polymerase (DNA directed), iota 	ENSMUST00000159389.1|Poli|ENSMUSG00000038425.11|polymerase (DNA directed), iota
mm10_v2_chr14_-_41006882_41006976	0.0134	Rfx3_Rfx1_Rfx4	ENSMUST00000152837.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A 	ENSMUST00000134715.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chr15_-_36794498_36794547	0.0133838	Rfx3_Rfx1_Rfx4	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr8_+_56551090_56551143	0.0106517	Rfx3_Rfx1_Rfx4	ENSMUST00000040218.5|Fbxo8|ENSMUSG00000038206.6|F-box protein 8 	ENSMUST00000110322.3|Fbxo8|ENSMUSG00000038206.6|F-box protein 8
mm10_v2_chr1_+_75236439_75236469	0.0103833	Rfx3_Rfx1_Rfx4	ENSMUST00000082158.6|Dnajb2|ENSMUSG00000026203.10|DnaJ (Hsp40) homolog, subfamily B, member 2 	ENSMUST00000055223.7|Dnajb2|ENSMUSG00000026203.10|DnaJ (Hsp40) homolog, subfamily B, member 2
mm10_v2_chr1_+_182124737_182124800	0.00856522	Rfx3_Rfx1_Rfx4	ENSMUST00000111018.1|Srp9|ENSMUSG00000026511.6|signal recognition particle 9 	ENSMUST00000027792.5|Srp9|ENSMUSG00000026511.6|signal recognition particle 9
mm10_v2_chr8_-_46294592_46294671	0.00376866	Rfx3_Rfx1_Rfx4	ENSMUST00000058636.7|Helt|ENSMUSG00000047171.7|helt bHLH transcription factor
mm10_v2_chr7_+_44748584_44748634	0.00239069	Rfx3_Rfx1_Rfx4	ENSMUST00000171821.1|Vrk3|ENSMUSG00000002205.9|vaccinia related kinase 3
mm10_v2_chr6_+_91473695_91473787	0.000944976	Rfx3_Rfx1_Rfx4	ENSMUST00000032183.4|Tmem43|ENSMUSG00000030095.4|transmembrane protein 43
mm10_v2_chr5_-_121527186_121527258	0.00079991	Rfx3_Rfx1_Rfx4	ENSMUST00000152270.1|Mapkapk5|ENSMUSG00000029454.9|MAP kinase-activated protein kinase 5
