mm10_v2_chr13_-_66852017_66852017	1.7147	Six6	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chr6_-_23248264_23248390	1.69513	Six6	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr5_+_21543525_21543590	1.66889	Six6	ENSMUST00000035651.4|Lrrc17|ENSMUSG00000039883.4|leucine rich repeat containing 17
mm10_v2_chr15_+_98571004_98571026	1.56033	Six6	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr7_+_46847128_46847150	1.29821	Six6	ENSMUST00000005051.4|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr1_+_74713551_74713574	1.15753	Six6	ENSMUST00000027356.5|Cyp27a1|ENSMUSG00000026170.5|cytochrome P450, family 27, subfamily a, polypeptide 1
mm10_v2_chr11_-_11627824_11627824	1.0081	Six6	ENSMUST00000081896.4|4930512M02Rik|ENSMUSG00000062511.6|RIKEN cDNA 4930512M02 gene
mm10_v2_chrX_+_169685191_169685250	0.9854	Six6	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chrX_-_142966709_142966734	0.976079	Six6	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr2_-_180824596_180824630	0.967647	Six6	ENSMUST00000148700.1|Gm14340|ENSMUSG00000074507.6|predicted gene 14340
mm10_v2_chr14_+_67234620_67234645	0.921912	Six6	ENSMUST00000176029.1|Ebf2|ENSMUSG00000022053.7|early B cell factor 2
mm10_v2_chr11_-_46166397_46166508	0.892115	Six6	ENSMUST00000020679.2|Nipal4|ENSMUSG00000020411.2|NIPA-like domain containing 4
mm10_v2_chr4_-_97584605_97584610	0.815958	Six6	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr9_-_114564315_114564369	0.811775	Six6	ENSMUST00000111816.2|Trim71|ENSMUSG00000079259.2|tripartite motif-containing 71
mm10_v2_chr10_-_78487842_78487842	0.779301	Six6	ENSMUST00000069431.4|Gm9978|ENSMUSG00000055704.4|predicted gene 9978
mm10_v2_chr8_+_34115030_34115030	0.761725	Six6	ENSMUST00000095345.3|Mboat4|ENSMUSG00000071113.3|membrane bound O-acyltransferase domain containing 4
mm10_v2_chr9_+_104002546_104002776	0.750016	Six6	ENSMUST00000035167.8|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent) 	ENSMUST00000117054.1|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent)
mm10_v2_chr13_-_66851513_66851513	0.73098	Six6	ENSMUST00000169322.1|Gm17404|ENSMUSG00000095206.1|predicted gene, 17404
mm10_v2_chr7_+_30231884_30231948	0.727799	Six6	ENSMUST00000019882.9|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr6_+_128662379_128662396	0.694219	Six6	ENSMUST00000032518.4|Clec2h|ENSMUSG00000030364.4|C-type lectin domain family 2, member h
mm10_v2_chr8_+_105373265_105373277	0.688492	Six6	ENSMUST00000160650.1|Plekhg4|ENSMUSG00000014782.9|pleckstrin homology domain containing, family G (with RhoGef domain) member 4
mm10_v2_chr18_+_35553401_35553421	0.682778	Six6	ENSMUST00000181664.1|Snhg4|ENSMUSG00000097769.1|small nucleolar RNA host gene 4 (non-protein coding)
mm10_v2_chr4_-_97584612_97584643	0.672772	Six6	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr6_-_50382831_50382847	0.6635	Six6	ENSMUST00000114468.2|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3
mm10_v2_chr3_-_37724321_37724490	0.640541	Six6	ENSMUST00000108105.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000079755.4|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000099128.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148
mm10_v2_chr3_+_88207308_88207328	0.63082	Six6	ENSMUST00000180582.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr7_+_43690418_43690418	0.597589	Six6	ENSMUST00000056329.6|Klk14|ENSMUSG00000044737.6|kallikrein related-peptidase 14
mm10_v2_chr10_+_127759721_127759746	0.59219	Six6	ENSMUST00000073639.5|Rdh1|ENSMUSG00000089789.1|retinol dehydrogenase 1 (all trans)
mm10_v2_chr11_-_102365111_102365280	0.58582	Six6	ENSMUST00000006749.9|Slc4a1|ENSMUSG00000006574.9|solute carrier family 4 (anion exchanger), member 1
mm10_v2_chr18_-_88927447_88927481	0.548768	Six6	ENSMUST00000147313.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr11_+_115564434_115564490	0.544591	Six6	ENSMUST00000021085.4|Nup85|ENSMUSG00000020739.5|nucleoporin 85
mm10_v2_chr1_+_45311538_45311638	0.527621	Six6	ENSMUST00000087883.6|Col3a1|ENSMUSG00000026043.12|collagen, type III, alpha 1
mm10_v2_chr4_+_11758147_11758220	0.526032	Six6	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr19_+_46341118_46341122	0.513223	Six6	ENSMUST00000128041.1|Tmem180|ENSMUSG00000025227.8|transmembrane protein 180
mm10_v2_chr11_+_98412461_98412566	0.507978	Six6	ENSMUST00000058295.5|Erbb2|ENSMUSG00000062312.5|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm10_v2_chr17_+_35241838_35241870	0.506459	Six6	ENSMUST00000173731.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr1_-_165708088_165708099	0.487979	Six6	ENSMUST00000040357.8|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1 	ENSMUST00000097474.3|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1
mm10_v2_chrY_-_6237995_6237995	0.480074	Six6	ENSMUST00000177612.1|Gm21746|ENSMUSG00000094346.1|predicted gene, 21746
mm10_v2_chr4_+_134864536_134864601	0.467764	Six6	ENSMUST00000030627.7|Rhd|ENSMUSG00000028825.7|Rh blood group, D antigen
mm10_v2_chr8_+_69822429_69822592	0.457303	Six6	ENSMUST00000164890.1|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2 	ENSMUST00000034325.4|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2
mm10_v2_chr12_+_52097737_52097775	0.449642	Six6	ENSMUST00000040090.9|Nubpl|ENSMUSG00000035142.12|nucleotide binding protein-like
mm10_v2_chr17_+_35241746_35241778	0.44958	Six6	ENSMUST00000068056.5|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 	ENSMUST00000174757.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr8_-_40634776_40634806	0.447988	Six6	ENSMUST00000048898.10|Mtmr7|ENSMUSG00000039431.10|myotubularin related protein 7 	ENSMUST00000174205.1|Mtmr7|ENSMUSG00000039431.10|myotubularin related protein 7
mm10_v2_chr4_-_42084291_42084291	0.426795	Six6	ENSMUST00000177937.1|Gm21968|ENSMUSG00000095881.1|predicted gene, 21968
mm10_v2_chr10_+_128238034_128238069	0.425654	Six6	ENSMUST00000105245.2|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1
mm10_v2_chr7_-_126676357_126676383	0.42031	Six6	ENSMUST00000106371.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000106372.3|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000155419.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr8_-_121829480_121829571	0.412563	Six6	ENSMUST00000174717.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000174192.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000045884.10|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4
mm10_v2_chr3_-_9004686_9004750	0.412523	Six6	ENSMUST00000120143.1|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr1_+_171419027_171419052	0.407793	Six6	ENSMUST00000171362.1|Tstd1|ENSMUSG00000091166.1|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1
mm10_v2_chr11_-_105937798_105937871	0.396615	Six6	ENSMUST00000183493.1|Cyb561|ENSMUSG00000019590.10|cytochrome b-561
mm10_v2_chr13_+_94083490_94083511	0.389216	Six6	ENSMUST00000156071.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr5_+_117319258_117319284	0.375424	Six6	ENSMUST00000111967.1|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr10_-_128180265_128180307	0.361999	Six6	ENSMUST00000099139.1|Rbms2|ENSMUSG00000040043.9|RNA binding motif, single stranded interacting protein 2
mm10_v2_chr4_+_156013835_156013849	0.358595	Six6	ENSMUST00000030952.5|Tnfrsf4|ENSMUSG00000029075.6|tumor necrosis factor receptor superfamily, member 4
mm10_v2_chr11_-_106272927_106273006	0.356648	Six6	ENSMUST00000021052.9|Smarcd2|ENSMUSG00000078619.4|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm10_v2_chr4_-_43653560_43653594	0.354058	Six6	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr8_-_94918012_94918098	0.353014	Six6	ENSMUST00000077955.5|Ccdc102a|ENSMUSG00000063605.5|coiled-coil domain containing 102A
mm10_v2_chr7_-_42578588_42578588	0.346086	Six6	ENSMUST00000179470.1|Gm21028|ENSMUSG00000094462.1|predicted gene, 21028
mm10_v2_chr15_+_55112317_55112346	0.337652	Six6	ENSMUST00000096433.3|Deptor|ENSMUSG00000022419.9|DEP domain containing MTOR-interacting protein
mm10_v2_chr13_+_65512678_65512678	0.333095	Six6	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr12_-_87443800_87443850	0.331701	Six6	ENSMUST00000162961.1|Alkbh1|ENSMUSG00000079036.4|alkB, alkylation repair homolog 1 (E. coli)
mm10_v2_chr5_+_104046869_104046899	0.322596	Six6	ENSMUST00000031250.7|Nudt9|ENSMUSG00000029310.7|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm10_v2_chr14_-_77036081_77036081	0.318792	Six6	ENSMUST00000142300.1|Lacc1|ENSMUSG00000044350.8|laccase (multicopper oxidoreductase) domain containing 1
mm10_v2_chr13_-_56895737_56895793	0.316991	Six6	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chr9_-_121839460_121839465	0.312678	Six6	ENSMUST00000135986.2|Ccdc13|ENSMUSG00000079235.4|coiled-coil domain containing 13
mm10_v2_chrX_-_74373218_74373249	0.312204	Six6	ENSMUST00000178691.1|Ubl4|ENSMUSG00000015290.9|ubiquitin-like 4 	ENSMUST00000114146.1|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm10_v2_chr17_+_40811089_40811133	0.308341	Six6	ENSMUST00000024721.7|Rhag|ENSMUSG00000023926.7|Rhesus blood group-associated A glycoprotein
mm10_v2_chr5_+_121204477_121204499	0.305265	Six6	ENSMUST00000031617.9|Rpl6|ENSMUSG00000029614.9|ribosomal protein L6
mm10_v2_chr5_+_140419248_140419377	0.294549	Six6	ENSMUST00000100507.3|Eif3b|ENSMUSG00000056076.9|eukaryotic translation initiation factor 3, subunit B
mm10_v2_chr19_-_53589067_53589067	0.283164	Six6	ENSMUST00000095978.3|Nutf2-ps1|ENSMUSG00000071497.3|nuclear transport factor 2, pseudogene 1
mm10_v2_chr5_+_122210134_122210295	0.276268	Six6	ENSMUST00000100747.2|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1
mm10_v2_chrX_-_74373260_74373349	0.27464	Six6	ENSMUST00000073067.4|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3 	ENSMUST00000037967.5|Slc10a3|ENSMUSG00000032806.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm10_v2_chr11_+_100319880_100319905	0.264091	Six6	ENSMUST00000049385.7|Eif1|ENSMUSG00000035530.7|eukaryotic translation initiation factor 1
mm10_v2_chr4_+_36952930_36952970	0.25317	Six6	ENSMUST00000144029.1|Gm12371|ENSMUSG00000084898.1|predicted gene 12371
mm10_v2_chr5_+_140607334_140607352	0.252942	Six6	ENSMUST00000031555.1|Lfng|ENSMUSG00000029570.1|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm10_v2_chr18_+_56432116_56432163	0.245989	Six6	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr9_+_98422961_98422961	0.240121	Six6	ENSMUST00000052068.9|Rbp1|ENSMUSG00000046402.9|retinol binding protein 1, cellular
mm10_v2_chr6_-_81965925_81965962	0.228766	Six6	ENSMUST00000032124.8|Mrpl19|ENSMUSG00000030045.10|mitochondrial ribosomal protein L19
mm10_v2_chr1_-_128359610_128359698	0.225658	Six6	ENSMUST00000027601.4|Mcm6|ENSMUSG00000026355.5|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
mm10_v2_chr19_-_44135816_44135881	0.224717	Six6	ENSMUST00000026218.5|Cwf19l1|ENSMUSG00000025200.6|CWF19-like 1, cell cycle control (S. pombe)
mm10_v2_chr7_-_100855403_100855440	0.223835	Six6	ENSMUST00000156855.1|Relt|ENSMUSG00000008318.3|RELT tumor necrosis factor receptor
mm10_v2_chr16_-_90810365_90810429	0.221463	Six6	ENSMUST00000140920.1|Urb1|ENSMUSG00000039929.8|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
mm10_v2_chr8_+_69832633_69832712	0.20044	Six6	ENSMUST00000131637.2|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4 	ENSMUST00000081503.6|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4
mm10_v2_chr19_-_55315980_55316038	0.194959	Six6	ENSMUST00000076891.5|Zdhhc6|ENSMUSG00000024982.9|zinc finger, DHHC domain containing 6
mm10_v2_chr4_-_43653542_43653557	0.194709	Six6	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr2_+_106693185_106693278	0.193465	Six6	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr15_+_79895017_79895036	0.192506	Six6	ENSMUST00000023054.7|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm10_v2_chr5_+_90903864_90903899	0.191103	Six6	ENSMUST00000075433.6|Cxcl2|ENSMUSG00000058427.7|chemokine (C-X-C motif) ligand 2
mm10_v2_chr15_+_55557575_55557604	0.189578	Six6	ENSMUST00000170046.1|Mtbp|ENSMUSG00000022369.7|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm10_v2_chr8_-_86885222_86885282	0.188162	Six6	ENSMUST00000034074.7|N4bp1|ENSMUSG00000031652.10|NEDD4 binding protein 1
mm10_v2_chr7_-_101903783_101903786	0.186892	Six6	ENSMUST00000106969.1|Tomt|ENSMUSG00000078630.1|transmembrane O-methyltransferase
mm10_v2_chr7_+_110627650_110627669	0.18609	Six6	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr17_+_57279094_57279127	0.183057	Six6	ENSMUST00000169220.2|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000005889.9|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000112870.4|Vav1|ENSMUSG00000034116.11|vav 1 oncogene
mm10_v2_chr11_-_28583995_28584105	0.182232	Six6	ENSMUST00000146385.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr15_-_82244716_82244755	0.179124	Six6	ENSMUST00000089155.4|Cenpm|ENSMUSG00000068101.4|centromere protein M 	ENSMUST00000089157.3|Cenpm|ENSMUSG00000068101.4|centromere protein M
mm10_v2_chr16_-_18235074_18235184	0.175113	Six6	ENSMUST00000076957.5|Zdhhc8|ENSMUSG00000060166.5|zinc finger, DHHC domain containing 8
mm10_v2_chr10_+_80603253_80603297	0.174494	Six6	ENSMUST00000180350.1|Scamp4|ENSMUSG00000078441.4|secretory carrier membrane protein 4
mm10_v2_chr7_+_75610038_75610080	0.174231	Six6	ENSMUST00000125771.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr8_+_31150307_31150346	0.171607	Six6	ENSMUST00000098842.2|Tti2|ENSMUSG00000031577.9|TELO2 interacting protein 2
mm10_v2_chr16_+_10835046_10835084	0.171025	Six6	ENSMUST00000037913.8|Rmi2|ENSMUSG00000037991.9|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)
mm10_v2_chr2_+_129800451_129800526	0.152615	Six6	ENSMUST00000165413.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35 	ENSMUST00000166282.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35
mm10_v2_chrX_-_7947848_7947889	0.151617	Six6	ENSMUST00000115642.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6 	ENSMUST00000033501.8|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6 	ENSMUST00000145675.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr16_-_65562686_65562769	0.149503	Six6	ENSMUST00000004965.6|Chmp2b|ENSMUSG00000004843.6|charged multivesicular body protein 2B
mm10_v2_chr2_+_127336152_127336166	0.142018	Six6	ENSMUST00000028846.6|Dusp2|ENSMUSG00000027368.6|dual specificity phosphatase 2
mm10_v2_chr19_+_8764934_8765034	0.140196	Six6	ENSMUST00000184663.1|Nxf1|ENSMUSG00000010097.7|nuclear RNA export factor 1
mm10_v2_chr6_-_115675871_115675964	0.134638	Six6	ENSMUST00000112949.1|Raf1|ENSMUSG00000000441.11|v-raf-leukemia viral oncogene 1
mm10_v2_chr8_-_4275886_4275915	0.133881	Six6	ENSMUST00000003029.7|Timm44|ENSMUSG00000002949.8|translocase of inner mitochondrial membrane 44
mm10_v2_chr19_-_11336107_11336144	0.132401	Six6	ENSMUST00000056035.2|Ms4a7|ENSMUSG00000024672.5|membrane-spanning 4-domains, subfamily A, member 7 	ENSMUST00000067532.4|Ms4a7|ENSMUSG00000024672.5|membrane-spanning 4-domains, subfamily A, member 7
mm10_v2_chr13_+_43785107_43785160	0.130884	Six6	ENSMUST00000015540.2|Cd83|ENSMUSG00000015396.3|CD83 antigen
mm10_v2_chr7_-_130547358_130547386	0.129001	Six6	ENSMUST00000160289.1|Nsmce4a|ENSMUSG00000040331.9|non-SMC element 4 homolog A (S. cerevisiae)
mm10_v2_chr7_-_35647127_35647209	0.126967	Six6	ENSMUST00000120714.1|Pdcd5|ENSMUSG00000030417.9|programmed cell death 5
mm10_v2_chr12_+_84773262_84773319	0.126181	Six6	ENSMUST00000021667.5|Isca2|ENSMUSG00000021241.6|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)
mm10_v2_chr19_-_4625612_4625658	0.119702	Six6	ENSMUST00000025823.3|Rce1|ENSMUSG00000024889.3|RCE1 homolog, prenyl protein peptidase (S. cerevisiae)
mm10_v2_chrX_-_7947553_7947674	0.118103	Six6	ENSMUST00000133349.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr3_-_106547726_106547802	0.115565	Six6	ENSMUST00000039153.7|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000148269.1|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000068301.4|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1
mm10_v2_chr16_-_92466081_92466187	0.115504	Six6	ENSMUST00000060005.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr7_+_27591513_27591562	0.108619	Six6	ENSMUST00000108344.2|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr19_-_4042165_4042242	0.106661	Six6	ENSMUST00000042700.9|Gstp2|ENSMUSG00000038155.9|glutathione S-transferase, pi 2
mm10_v2_chr2_+_30281043_30281043	0.106254	Six6	ENSMUST00000143119.2|RP23-395P6.9|ENSMUSG00000098794.1|RP23-395P6.9
mm10_v2_chr16_-_18876655_18876767	0.100715	Six6	ENSMUST00000023391.8|Mrpl40|ENSMUSG00000022706.9|mitochondrial ribosomal protein L40
mm10_v2_chr3_+_157534103_157534160	0.0938955	Six6	ENSMUST00000106058.1|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2
mm10_v2_chr15_+_55557399_55557436	0.0929722	Six6	ENSMUST00000022998.7|Mtbp|ENSMUSG00000022369.7|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm10_v2_chr17_-_27909206_27909264	0.0922741	Six6	ENSMUST00000114848.1|Taf11|ENSMUSG00000024218.6|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr3_+_85574109_85574148	0.0922096	Six6	ENSMUST00000127348.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107672.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107674.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae)
mm10_v2_chr7_+_81762925_81762943	0.0909283	Six6	ENSMUST00000042166.4|Fam103a1|ENSMUSG00000038646.7|family with sequence similarity 103, member A1
mm10_v2_chr7_-_126676428_126676439	0.0901123	Six6	ENSMUST00000106373.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr15_-_76206309_76206357	0.0889997	Six6	ENSMUST00000073418.6|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000171634.1|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000076442.5|Plec|ENSMUSG00000022565.9|plectin
mm10_v2_chr4_+_42318334_42318334	0.0837762	Six6	ENSMUST00000178192.1|Gm21598|ENSMUSG00000093996.1|predicted gene, 21598
mm10_v2_chr2_+_117249725_117249754	0.0835492	Six6	ENSMUST00000028825.4|Fam98b|ENSMUSG00000027349.5|family with sequence similarity 98, member B
mm10_v2_chr2_-_114175321_114175344	0.0805424	Six6	ENSMUST00000043160.6|Aqr|ENSMUSG00000040383.10|aquarius
mm10_v2_chr3_+_146220955_146221009	0.0750947	Six6	ENSMUST00000039164.2|Lpar3|ENSMUSG00000036832.4|lysophosphatidic acid receptor 3
mm10_v2_chr5_-_88527841_88527891	0.0740128	Six6	ENSMUST00000087033.3|Igj|ENSMUSG00000067149.3|immunoglobulin joining chain
mm10_v2_chr2_-_114201416_114201469	0.063904	Six6	ENSMUST00000050668.3|Zfp770|ENSMUSG00000040321.3|zinc finger protein 770
mm10_v2_chr12_-_113422730_113422744	0.0635824	Six6	ENSMUST00000177715.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu 	ENSMUST00000103426.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu
mm10_v2_chr8_+_84831522_84831522	0.0626553	Six6	ENSMUST00000036734.5|Gadd45gip1|ENSMUSG00000033751.5|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm10_v2_chr18_+_74216118_74216145	0.0608437	Six6	ENSMUST00000025444.6|Cxxc1|ENSMUSG00000024560.6|CXXC finger 1 (PHD domain)
mm10_v2_chr8_+_71951038_71951130	0.0514165	Six6	ENSMUST00000131237.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000136516.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000109997.2|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000132848.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961
mm10_v2_chr1_-_118982551_118982606	0.0498261	Six6	ENSMUST00000159678.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr9_-_66975387_66975484	0.0493361	Six6	ENSMUST00000034929.6|Lactb|ENSMUSG00000032370.7|lactamase, beta
mm10_v2_chr5_-_148371525_148371546	0.0486683	Six6	ENSMUST00000138596.1|Slc7a1|ENSMUSG00000041313.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm10_v2_chr6_-_8259098_8259173	0.0462677	Six6	ENSMUST00000012627.4|Rpa3|ENSMUSG00000012483.4|replication protein A3
mm10_v2_chr5_-_100373484_100373527	0.0448121	Six6	ENSMUST00000182433.1|Sec31a|ENSMUSG00000035325.10|Sec31 homolog A (S. cerevisiae)
mm10_v2_chr7_+_127800844_127800941	0.044017	Six6	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr7_-_141168671_141168936	0.0434562	Six6	ENSMUST00000106033.3|Rnh1|ENSMUSG00000038650.8|ribonuclease/angiogenin inhibitor 1
mm10_v2_chrX_+_103414461_103414481	0.0423273	Six6	ENSMUST00000033691.4|Tsx|ENSMUSG00000031329.4|testis specific X-linked gene
mm10_v2_chrM_+_2743_2761	0.0399351	Six6	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr2_+_70661556_70661692	0.0354331	Six6	ENSMUST00000112201.1|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2 	ENSMUST00000028509.4|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2 	ENSMUST00000133432.1|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2 	ENSMUST00000112205.1|Gorasp2|ENSMUSG00000014959.6|golgi reassembly stacking protein 2
mm10_v2_chr11_-_60417022_60417056	0.0349866	Six6	ENSMUST00000108721.1|Atpaf2|ENSMUSG00000042709.8|ATP synthase mitochondrial F1 complex assembly factor 2
mm10_v2_chr9_+_77921908_77921932	0.0321486	Six6	ENSMUST00000133757.1|Elovl5|ENSMUSG00000032349.7|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm10_v2_chr11_-_99230998_99231019	0.0299712	Six6	ENSMUST00000103133.3|Smarce1|ENSMUSG00000037935.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm10_v2_chr5_+_144244432_144244457	0.0271678	Six6	ENSMUST00000110695.1|Bri3|ENSMUSG00000047843.10|brain protein I3
mm10_v2_chr9_+_72958785_72958850	0.02388	Six6	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chr1_+_97770158_97770209	0.0237869	Six6	ENSMUST00000112844.3|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000112842.1|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000027571.6|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1
mm10_v2_chr5_+_123907175_123907292	0.0236861	Six6	ENSMUST00000023869.8|Denr|ENSMUSG00000023106.9|density-regulated protein
mm10_v2_chr17_+_56717759_56717819	0.0236464	Six6	ENSMUST00000002452.6|Ndufa11|ENSMUSG00000002379.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11
mm10_v2_chr13_+_100124850_100124924	0.0165431	Six6	ENSMUST00000022147.8|Smn1|ENSMUSG00000021645.10|survival motor neuron 1 	ENSMUST00000091321.5|Smn1|ENSMUSG00000021645.10|survival motor neuron 1 	ENSMUST00000143937.1|Smn1|ENSMUSG00000021645.10|survival motor neuron 1
mm10_v2_chr9_-_119341390_119341420	0.0142778	Six6	ENSMUST00000139870.1|Myd88|ENSMUSG00000032508.8|myeloid differentiation primary response gene 88
mm10_v2_chr17_+_55959146_55959187	0.0116803	Six6	ENSMUST00000086869.4|Ccdc94|ENSMUSG00000003208.8|coiled-coil domain containing 94
mm10_v2_chr11_-_100650693_100650749	0.0103826	Six6	ENSMUST00000103119.3|Zfp385c|ENSMUSG00000014198.9|zinc finger protein 385C
mm10_v2_chr7_-_4778141_4778144	0.00847311	Six6	ENSMUST00000094892.5|Il11|ENSMUSG00000004371.8|interleukin 11
mm10_v2_chr5_-_23616528_23616597	0.00558179	Six6	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr2_-_103797617_103797662	0.00451168	Six6	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
