mm10_v2_chr13_-_22042949_22042978	2.76845	Smad4	ENSMUST00000091741.4|Hist1h2ag|ENSMUSG00000069301.4|histone cluster 1, H2ag
mm10_v2_chr7_+_24862193_24862213	2.44358	Smad4	ENSMUST00000052897.4|Gm9844|ENSMUSG00000050347.5|predicted pseudogene 9844 	ENSMUST00000170837.2|Gm9844|ENSMUSG00000091955.2|predicted pseudogene 9844
mm10_v2_chr10_-_127534540_127534566	2.36013	Smad4	ENSMUST00000095266.2|Nxph4|ENSMUSG00000040258.6|neurexophilin 4
mm10_v2_chr13_-_21832194_21832198	2.24399	Smad4	ENSMUST00000102979.1|Hist1h4n|ENSMUSG00000069305.3|histone cluster 1, H4n
mm10_v2_chr1_-_16770138_16770159	2.1593	Smad4	ENSMUST00000071842.8|Gm5828|ENSMUSG00000091020.2|predicted gene 5828
mm10_v2_chr11_-_95514570_95514707	1.95285	Smad4	ENSMUST00000058866.7|Nxph3|ENSMUSG00000046719.7|neurexophilin 3
mm10_v2_chr13_+_23581563_23581598	1.67449	Smad4	ENSMUST00000102968.1|Hist1h4d|ENSMUSG00000061482.6|histone cluster 1, H4d
mm10_v2_chr14_-_104467984_104468041	1.65671	Smad4	ENSMUST00000053016.8|Pou4f1|ENSMUSG00000048349.8|POU domain, class 4, transcription factor 1
mm10_v2_chr13_-_23551648_23551672	1.51891	Smad4	ENSMUST00000102971.1|Hist1h4f|ENSMUSG00000069274.3|histone cluster 1, H4f
mm10_v2_chr13_+_23531044_23531088	1.4992	Smad4	ENSMUST00000102972.3|Hist1h4h|ENSMUSG00000060981.5|histone cluster 1, H4h
mm10_v2_chr19_+_5740885_5740904	1.24941	Smad4	ENSMUST00000081496.5|Ltbp3|ENSMUSG00000024940.10|latent transforming growth factor beta binding protein 3
mm10_v2_chr13_+_21735055_21735070	1.23923	Smad4	ENSMUST00000087714.4|Hist1h4j|ENSMUSG00000067455.4|histone cluster 1, H4j
mm10_v2_chr3_-_96220880_96220899	1.15662	Smad4	ENSMUST00000090782.3|Hist2h2ac|ENSMUSG00000068855.3|histone cluster 2, H2ac
mm10_v2_chr10_+_80150448_80150482	1.15003	Smad4	ENSMUST00000153477.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr8_+_54954728_54954820	1.10918	Smad4	ENSMUST00000033915.7|Gpm6a|ENSMUSG00000031517.7|glycoprotein m6a
mm10_v2_chr4_-_148130678_148130706	1.06548	Smad4	ENSMUST00000030862.4|Draxin|ENSMUSG00000029005.4|dorsal inhibitory axon guidance protein
mm10_v2_chr8_-_109251698_109251728	1.05144	Smad4	ENSMUST00000079189.3|4922502B01Rik|ENSMUSG00000057387.3|RIKEN cDNA 4922502B01 gene
mm10_v2_chr8_-_92356103_92356120	0.941653	Smad4	ENSMUST00000034183.3|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene
mm10_v2_chr19_+_46328179_46328205	0.861739	Smad4	ENSMUST00000026256.2|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15 	ENSMUST00000177667.1|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15
mm10_v2_chr6_-_72958097_72958302	0.827556	Smad4	ENSMUST00000114049.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr13_-_23934156_23934225	0.811353	Smad4	ENSMUST00000052776.2|Hist1h2ba|ENSMUSG00000050799.2|histone cluster 1, H2ba
mm10_v2_chrX_+_56779437_56779565	0.780464	Smad4	ENSMUST00000114773.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr3_+_127633134_127633140	0.776628	Smad4	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chr2_+_32628390_32628415	0.765376	Smad4	ENSMUST00000156578.1|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr6_+_54040078_54040091	0.746186	Smad4	ENSMUST00000127323.2|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr13_+_22043189_22043214	0.727464	Smad4	ENSMUST00000110452.1|Hist1h2bj|ENSMUSG00000069300.3|histone cluster 1, H2bj
mm10_v2_chr5_+_75574916_75575001	0.716357	Smad4	ENSMUST00000144270.1|Kit|ENSMUSG00000005672.6|kit oncogene 	ENSMUST00000005815.6|Kit|ENSMUSG00000005672.6|kit oncogene
mm10_v2_chr11_-_33147400_33147448	0.702024	Smad4	ENSMUST00000020507.7|Fgf18|ENSMUSG00000057967.6|fibroblast growth factor 18
mm10_v2_chr6_-_138422898_138422999	0.677669	Smad4	ENSMUST00000161450.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000163024.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000162185.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr4_-_95052170_95052181	0.674403	Smad4	ENSMUST00000058555.2|Jun|ENSMUSG00000052684.3|Jun oncogene
mm10_v2_chr5_+_120431770_120431905	0.671935	Smad4	ENSMUST00000031591.7|Lhx5|ENSMUSG00000029595.7|LIM homeobox protein 5
mm10_v2_chr2_-_173276144_173276189	0.659092	Smad4	ENSMUST00000139306.1|Pmepa1|ENSMUSG00000038400.9|prostate transmembrane protein, androgen induced 1
mm10_v2_chr1_-_173367638_173367695	0.640854	Smad4	ENSMUST00000005470.4|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3 	ENSMUST00000111220.1|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3
mm10_v2_chr4_+_133011506_133011546	0.572399	Smad4	ENSMUST00000105915.1|Ahdc1|ENSMUSG00000037692.8|AT hook, DNA binding motif, containing 1 	ENSMUST00000105916.1|Ahdc1|ENSMUSG00000037692.8|AT hook, DNA binding motif, containing 1
mm10_v2_chr14_-_54577578_54577661	0.566174	Smad4	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr12_+_103314944_103314962	0.564874	Smad4	ENSMUST00000179363.1|Fam181a|ENSMUSG00000096753.1|family with sequence similarity 181, member A
mm10_v2_chr5_-_24601961_24602012	0.557497	Smad4	ENSMUST00000030791.7|Smarcd3|ENSMUSG00000028949.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
mm10_v2_chr5_-_137741102_137741185	0.548627	Smad4	ENSMUST00000149512.1|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
mm10_v2_chr5_+_30913398_30913403	0.519125	Smad4	ENSMUST00000031055.5|Emilin1|ENSMUSG00000029163.7|elastin microfibril interfacer 1
mm10_v2_chr5_+_117841839_117841857	0.511314	Smad4	ENSMUST00000142742.2|Nos1|ENSMUSG00000029361.12|nitric oxide synthase 1, neuronal
mm10_v2_chr5_+_7179299_7179365	0.497606	Smad4	ENSMUST00000179460.1|Tubb4b-ps1|ENSMUSG00000095159.1|tubulin, beta 4B class IVB, pseudogene 1
mm10_v2_chr7_+_101421691_101421726	0.497207	Smad4	ENSMUST00000163751.2|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000084894.7|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000166652.1|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated
mm10_v2_chr3_+_88607742_88607791	0.490855	Smad4	ENSMUST00000175903.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr7_+_4690760_4690928	0.485107	Smad4	ENSMUST00000048248.7|Brsk1|ENSMUSG00000035390.10|BR serine/threonine kinase 1
mm10_v2_chr17_-_29888570_29888629	0.480342	Smad4	ENSMUST00000171691.1|Mdga1|ENSMUSG00000043557.9|MAM domain containing glycosylphosphatidylinositol anchor 1
mm10_v2_chr14_+_57826210_57826272	0.474689	Smad4	ENSMUST00000022538.3|Mrp63|ENSMUSG00000021967.3|mitochondrial ribosomal protein 63
mm10_v2_chr7_-_30362772_30362772	0.47337	Smad4	ENSMUST00000046351.5|Lrfn3|ENSMUSG00000036957.7|leucine rich repeat and fibronectin type III domain containing 3
mm10_v2_chrX_+_136270302_136270352	0.46682	Smad4	ENSMUST00000113112.1|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1
mm10_v2_chr17_+_75178797_75178824	0.457353	Smad4	ENSMUST00000112516.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1 	ENSMUST00000135447.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chrX_+_136270253_136270269	0.451591	Smad4	ENSMUST00000178632.1|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENSMUST00000053540.4|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1
mm10_v2_chr7_+_45215753_45215852	0.448465	Smad4	ENSMUST00000033060.6|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000155313.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000107801.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr17_+_75178911_75178961	0.447952	Smad4	ENSMUST00000112514.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr15_+_81936911_81936982	0.428442	Smad4	ENSMUST00000135663.1|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr10_+_80300997_80301050	0.410459	Smad4	ENSMUST00000140828.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2 	ENSMUST00000138909.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr15_+_39076885_39076938	0.40642	Smad4	ENSMUST00000067072.3|Cthrc1|ENSMUSG00000054196.6|collagen triple helix repeat containing 1
mm10_v2_chr1_-_133801031_133801041	0.405965	Smad4	ENSMUST00000143567.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr7_+_83755904_83755956	0.405528	Smad4	ENSMUST00000051522.8|Gm7964|ENSMUSG00000063902.6|predicted gene 7964 	ENSMUST00000042280.7|Gm7964|ENSMUSG00000063902.6|predicted gene 7964
mm10_v2_chr5_+_111417263_111417442	0.399025	Smad4	ENSMUST00000094463.4|Mn1|ENSMUSG00000070576.4|meningioma 1
mm10_v2_chr7_+_45216671_45216695	0.390288	Smad4	ENSMUST00000134420.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr11_-_89302545_89302567	0.38999	Smad4	ENSMUST00000061728.3|Nog|ENSMUSG00000048616.3|noggin
mm10_v2_chr17_+_72918298_72918316	0.389586	Smad4	ENSMUST00000024857.6|Lbh|ENSMUSG00000024063.6|limb-bud and heart
mm10_v2_chr11_+_60699718_60699750	0.385068	Smad4	ENSMUST00000052346.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr19_-_40271506_40271616	0.384656	Smad4	ENSMUST00000068439.6|Pdlim1|ENSMUSG00000055044.6|PDZ and LIM domain 1 (elfin)
mm10_v2_chr17_-_25081138_25081201	0.372694	Smad4	ENSMUST00000024984.6|Tmem204|ENSMUSG00000024168.7|transmembrane protein 204
mm10_v2_chr11_-_106159902_106159927	0.371253	Smad4	ENSMUST00000064545.4|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr7_+_141216626_141216700	0.370415	Smad4	ENSMUST00000141804.1|Rassf7|ENSMUSG00000038618.5|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 	ENSMUST00000148975.1|Rassf7|ENSMUSG00000038618.5|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
mm10_v2_chr11_-_106160708_106160860	0.36899	Smad4	ENSMUST00000106875.1|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr4_+_128688726_128688795	0.354224	Smad4	ENSMUST00000106080.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr2_+_119547697_119547762	0.352654	Smad4	ENSMUST00000014221.6|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1 	ENSMUST00000119172.1|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1
mm10_v2_chr9_+_57940104_57940120	0.339408	Smad4	ENSMUST00000043059.7|Sema7a|ENSMUSG00000038264.7|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm10_v2_chr11_-_26591729_26591729	0.339386	Smad4	ENSMUST00000109504.1|Vrk2|ENSMUSG00000064090.8|vaccinia related kinase 2
mm10_v2_chr4_-_134245579_134245604	0.337611	Smad4	ENSMUST00000030644.7|Zfp593|ENSMUSG00000028840.10|zinc finger protein 593
mm10_v2_chr4_+_97772734_97772848	0.335619	Smad4	ENSMUST00000152023.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chrX_-_7898864_7898912	0.329357	Smad4	ENSMUST00000154552.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr11_+_69846610_69846659	0.327916	Smad4	ENSMUST00000152566.1|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3 	ENSMUST00000108633.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr2_+_155940728_155940728	0.321687	Smad4	ENSMUST00000109629.1|Gm15557|ENSMUSG00000078972.1|predicted gene 15557
mm10_v2_chr7_+_119895836_119895884	0.312271	Smad4	ENSMUST00000106518.1|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1 	ENSMUST00000054440.3|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1
mm10_v2_chr8_-_34146974_34147033	0.309504	Smad4	ENSMUST00000033910.8|Leprotl1|ENSMUSG00000031513.8|leptin receptor overlapping transcript-like 1
mm10_v2_chr11_-_69413675_69413675	0.307322	Smad4	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chr19_+_4231899_4231928	0.306039	Smad4	ENSMUST00000025773.3|Pold4|ENSMUSG00000024854.3|polymerase (DNA-directed), delta 4
mm10_v2_chr2_-_128967725_128967725	0.305436	Smad4	ENSMUST00000099385.2|Gm10762|ENSMUSG00000074807.2|predicted gene 10762
mm10_v2_chr1_+_177445660_177445821	0.299292	Smad4	ENSMUST00000077225.6|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr11_+_60699758_60699845	0.295554	Smad4	ENSMUST00000108719.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr16_-_55283237_55283287	0.292306	Smad4	ENSMUST00000036412.3|Zpld1|ENSMUSG00000064310.4|zona pellucida like domain containing 1
mm10_v2_chr8_+_45658273_45658298	0.278356	Smad4	ENSMUST00000153798.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr6_+_54039558_54039575	0.276467	Smad4	ENSMUST00000046856.7|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr4_-_134254076_134254128	0.269965	Smad4	ENSMUST00000060050.5|Grrp1|ENSMUSG00000050105.5|glycine/arginine rich protein 1
mm10_v2_chr2_+_27079371_27079385	0.268745	Smad4	ENSMUST00000091233.6|Adamtsl2|ENSMUSG00000036040.8|ADAMTS-like 2
mm10_v2_chr18_-_52529692_52529709	0.267559	Smad4	ENSMUST00000025409.7|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr4_-_117178726_117178754	0.265102	Smad4	ENSMUST00000153953.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C 	ENSMUST00000106436.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr8_-_41016749_41016769	0.261392	Smad4	ENSMUST00000117735.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr18_-_52529847_52529890	0.259574	Smad4	ENSMUST00000171470.1|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr17_+_46646225_46646272	0.258675	Smad4	ENSMUST00000002844.7|Mrpl2|ENSMUSG00000002767.7|mitochondrial ribosomal protein L2 	ENSMUST00000113429.1|Mrpl2|ENSMUSG00000002767.7|mitochondrial ribosomal protein L2 	ENSMUST00000113430.1|Mrpl2|ENSMUSG00000002767.7|mitochondrial ribosomal protein L2
mm10_v2_chr4_+_126677630_126677646	0.254592	Smad4	ENSMUST00000030642.2|Psmb2|ENSMUSG00000028837.2|proteasome (prosome, macropain) subunit, beta type 2
mm10_v2_chr3_-_146839365_146839367	0.253123	Smad4	ENSMUST00000084614.3|Gm10288|ENSMUSG00000070343.2|predicted gene 10288
mm10_v2_chr1_+_187997835_187997882	0.244621	Smad4	ENSMUST00000110938.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr4_+_127172866_127172898	0.24173	Smad4	ENSMUST00000106094.2|Dlgap3|ENSMUSG00000042388.8|discs, large (Drosophila) homolog-associated protein 3
mm10_v2_chr15_+_81936753_81936839	0.236513	Smad4	ENSMUST00000038757.7|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr6_-_83775767_83775826	0.226261	Smad4	ENSMUST00000014892.6|Tex261|ENSMUSG00000014748.7|testis expressed gene 261
mm10_v2_chr2_+_128967383_128967443	0.222381	Smad4	ENSMUST00000110320.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6 	ENSMUST00000110319.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6
mm10_v2_chr11_-_106160101_106160168	0.219879	Smad4	ENSMUST00000045923.3|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr3_+_68572245_68572392	0.21762	Smad4	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr7_+_141949846_141949868	0.211029	Smad4	ENSMUST00000172652.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr11_+_69846665_69846681	0.209433	Smad4	ENSMUST00000019605.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr9_+_21424984_21425244	0.208614	Smad4	ENSMUST00000172482.1|Dnm2|ENSMUSG00000033335.11|dynamin 2 	ENSMUST00000174050.1|Dnm2|ENSMUSG00000033335.11|dynamin 2
mm10_v2_chrX_+_99136119_99136138	0.208439	Smad4	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr14_+_12189943_12190001	0.206	Smad4	ENSMUST00000119888.1|Ptprg|ENSMUSG00000021745.7|protein tyrosine phosphatase, receptor type, G
mm10_v2_chr14_-_54554359_54554370	0.205981	Smad4	ENSMUST00000022784.8|Haus4|ENSMUSG00000022177.8|HAUS augmin-like complex, subunit 4
mm10_v2_chrX_-_7898950_7899000	0.205179	Smad4	ENSMUST00000115655.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1 	ENSMUST00000156741.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr1_+_153652943_153653025	0.202953	Smad4	ENSMUST00000041776.5|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chrX_+_159708593_159708612	0.200298	Smad4	ENSMUST00000080394.6|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr4_+_116221689_116221698	0.199885	Smad4	ENSMUST00000106490.2|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr9_-_20898592_20898631	0.194446	Smad4	ENSMUST00000004206.8|Eif3g|ENSMUSG00000070319.5|eukaryotic translation initiation factor 3, subunit G
mm10_v2_chr4_-_129742275_129742312	0.185814	Smad4	ENSMUST00000066257.5|Khdrbs1|ENSMUSG00000028790.7|KH domain containing, RNA binding, signal transduction associated 1
mm10_v2_chr3_+_96221111_96221134	0.181929	Smad4	ENSMUST00000090781.6|Hist2h2be|ENSMUSG00000068854.6|histone cluster 2, H2be
mm10_v2_chr14_+_64950037_64950056	0.181743	Smad4	ENSMUST00000043914.5|Ints9|ENSMUSG00000021975.7|integrator complex subunit 9
mm10_v2_chr17_-_70851710_70851738	0.181526	Smad4	ENSMUST00000166395.2|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr19_+_4097392_4097415	0.181003	Smad4	ENSMUST00000174514.1|Cdk2ap2|ENSMUSG00000024856.4|CDK2-associated protein 2 	ENSMUST00000174149.1|Cdk2ap2|ENSMUSG00000024856.4|CDK2-associated protein 2
mm10_v2_chr1_+_187997821_187997834	0.180479	Smad4	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr10_+_75589363_75589390	0.177956	Smad4	ENSMUST00000072217.2|Ggt5|ENSMUSG00000006344.10|gamma-glutamyltransferase 5
mm10_v2_chr6_+_54039935_54040039	0.175555	Smad4	ENSMUST00000114403.1|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr4_+_116221633_116221661	0.173805	Smad4	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chrX_-_136741155_136741352	0.167984	Smad4	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr7_-_100855403_100855440	0.167506	Smad4	ENSMUST00000156855.1|Relt|ENSMUSG00000008318.3|RELT tumor necrosis factor receptor
mm10_v2_chr15_+_102102926_102102988	0.167246	Smad4	ENSMUST00000169627.1|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase 	ENSMUST00000046144.9|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase
mm10_v2_chr7_+_141949982_141950086	0.16435	Smad4	ENSMUST00000105989.2|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000075528.5|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000174499.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr19_-_8818924_8819008	0.15543	Smad4	ENSMUST00000153281.1|Ttc9c|ENSMUSG00000071660.4|tetratricopeptide repeat domain 9C
mm10_v2_chr9_+_59589288_59589353	0.154459	Smad4	ENSMUST00000121266.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000118164.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr17_+_24352037_24352149	0.152634	Smad4	ENSMUST00000079594.5|Abca3|ENSMUSG00000024130.9|ATP-binding cassette, sub-family A (ABC1), member 3
mm10_v2_chr13_-_115090123_115090241	0.148625	Smad4	ENSMUST00000109226.3|Pelo|ENSMUSG00000042275.8|pelota homolog (Drosophila)
mm10_v2_chr2_+_125136692_125136769	0.145379	Smad4	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr18_+_57133065_57133090	0.144552	Smad4	ENSMUST00000075770.6|Megf10|ENSMUSG00000024593.9|multiple EGF-like-domains 10
mm10_v2_chr2_+_55437100_55437182	0.141317	Smad4	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr12_-_36156781_36156825	0.137282	Smad4	ENSMUST00000020856.4|Bzw2|ENSMUSG00000020547.4|basic leucine zipper and W2 domains 2
mm10_v2_chr15_-_103366763_103366798	0.13501	Smad4	ENSMUST00000023128.6|Itga5|ENSMUSG00000000555.6|integrin alpha 5 (fibronectin receptor alpha)
mm10_v2_chr7_+_45785331_45785390	0.132259	Smad4	ENSMUST00000120005.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000123585.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr18_-_35498856_35498925	0.13072	Smad4	ENSMUST00000025215.8|Sil1|ENSMUSG00000024357.9|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm10_v2_chr9_+_61373482_61373535	0.129712	Smad4	ENSMUST00000160541.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000161207.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159630.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr8_+_95825353_95825354	0.125617	Smad4	ENSMUST00000074053.4|Gm10094|ENSMUSG00000061104.4|predicted gene 10094
mm10_v2_chr2_+_3114220_3114225	0.125383	Smad4	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr5_+_19907774_19907861	0.118728	Smad4	ENSMUST00000115267.2|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr11_-_3931789_3931816	0.113903	Smad4	ENSMUST00000109992.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109988.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2
mm10_v2_chr17_-_35162969_35163040	0.11316	Smad4	ENSMUST00000174805.1|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr6_-_72958465_72958496	0.112731	Smad4	ENSMUST00000114050.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr7_+_127485221_127485221	0.109745	Smad4	ENSMUST00000048896.6|Fbrs|ENSMUSG00000042423.7|fibrosin
mm10_v2_chr14_-_18331855_18331862	0.109567	Smad4	ENSMUST00000022296.6|Ube2e1|ENSMUSG00000021774.6|ubiquitin-conjugating enzyme E2E 1
mm10_v2_chr9_+_61373608_61373672	0.104461	Smad4	ENSMUST00000161689.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr4_+_148130883_148130915	0.104234	Smad4	ENSMUST00000084129.2|Mad2l2|ENSMUSG00000029003.5|MAD2 mitotic arrest deficient-like 2
mm10_v2_chr9_-_57552760_57552771	0.099501	Smad4	ENSMUST00000034856.8|Mpi|ENSMUSG00000032306.8|mannose phosphate isomerase
mm10_v2_chr12_+_13269111_13269154	0.0976158	Smad4	ENSMUST00000042953.8|Nbas|ENSMUSG00000020576.9|neuroblastoma amplified sequence
mm10_v2_chr11_-_115419917_115419962	0.0953901	Smad4	ENSMUST00000106537.1|Atp5h|ENSMUSG00000034566.4|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d 	ENSMUST00000043931.2|Atp5h|ENSMUSG00000034566.4|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d 	ENSMUST00000073791.3|Atp5h|ENSMUSG00000034566.4|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d
mm10_v2_chr5_-_24445166_24445220	0.0933858	Smad4	ENSMUST00000115043.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase 	ENSMUST00000115041.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr9_-_21852603_21852644	0.0894444	Smad4	ENSMUST00000034728.7|Dock6|ENSMUSG00000032198.8|dedicator of cytokinesis 6
mm10_v2_chr11_+_4637734_4637789	0.0894247	Smad4	ENSMUST00000109930.2|Ascc2|ENSMUSG00000020412.10|activating signal cointegrator 1 complex subunit 2 	ENSMUST00000070257.7|Ascc2|ENSMUSG00000020412.10|activating signal cointegrator 1 complex subunit 2
mm10_v2_chr7_-_126897424_126897483	0.0893942	Smad4	ENSMUST00000120007.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr4_+_116221590_116221618	0.089103	Smad4	ENSMUST00000147292.1|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr9_+_61373219_61373438	0.0846698	Smad4	ENSMUST00000162583.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000161993.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000160882.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000160724.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000162973.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159050.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr11_-_3931960_3932159	0.0843438	Smad4	ENSMUST00000109990.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000020710.4|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109989.3|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109991.1|Tcn2|ENSMUSG00000020432.6|transcobalamin 2 	ENSMUST00000109993.2|Tcn2|ENSMUSG00000020432.6|transcobalamin 2
mm10_v2_chrX_-_150812932_150813154	0.0765548	Smad4	ENSMUST00000131241.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000147152.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000143843.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr7_-_119895697_119895752	0.073475	Smad4	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr4_+_118621160_118621239	0.0730936	Smad4	ENSMUST00000147373.1|Ebna1bp2|ENSMUSG00000028729.9|EBNA1 binding protein 2
mm10_v2_chr9_-_49798905_49798931	0.0722822	Smad4	ENSMUST00000114476.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr9_+_96895617_96895617	0.0689144	Smad4	ENSMUST00000071781.6|Gm10123|ENSMUSG00000062933.6|predicted pseudogene 10123
mm10_v2_chr6_+_15720654_15720747	0.0681599	Smad4	ENSMUST00000101663.3|Mdfic|ENSMUSG00000041390.12|MyoD family inhibitor domain containing
mm10_v2_chr7_+_123377982_123378086	0.0646781	Smad4	ENSMUST00000033025.5|Lcmt1|ENSMUSG00000030763.6|leucine carboxyl methyltransferase 1
mm10_v2_chr5_+_92683625_92683648	0.057889	Smad4	ENSMUST00000168878.1|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr19_-_5295397_5295455	0.0563892	Smad4	ENSMUST00000025774.9|Sf3b2|ENSMUSG00000024853.9|splicing factor 3b, subunit 2
mm10_v2_chr7_-_45052865_45052914	0.0557858	Smad4	ENSMUST00000057293.6|Prr12|ENSMUSG00000046574.7|proline rich 12
mm10_v2_chr3_-_116968969_116969004	0.0543278	Smad4	ENSMUST00000143611.1|Palmd|ENSMUSG00000033377.8|palmdelphin 	ENSMUST00000040097.7|Palmd|ENSMUSG00000033377.8|palmdelphin
mm10_v2_chr11_+_4160348_4160404	0.052503	Smad4	ENSMUST00000002198.3|Sf3a1|ENSMUSG00000002129.5|splicing factor 3a, subunit 1
mm10_v2_chr9_-_49798729_49798855	0.0491598	Smad4	ENSMUST00000166811.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr11_+_60104971_60105013	0.0476046	Smad4	ENSMUST00000064190.6|Rai1|ENSMUSG00000062115.9|retinoic acid induced 1
mm10_v2_chr4_+_42950369_42950445	0.0469455	Smad4	ENSMUST00000084662.5|Dnajb5|ENSMUSG00000036052.8|DnaJ (Hsp40) homolog, subfamily B, member 5
mm10_v2_chr9_+_106429537_106429548	0.0427355	Smad4	ENSMUST00000059802.6|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chr5_-_24445254_24445287	0.038718	Smad4	ENSMUST00000030800.6|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr11_+_115420059_115420128	0.0387067	Smad4	ENSMUST00000103035.3|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2
mm10_v2_chrX_+_150588223_150588260	0.035574	Smad4	ENSMUST00000153221.1|Pfkfb1|ENSMUSG00000025271.7|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm10_v2_chrX_+_136707976_136708040	0.0299996	Smad4	ENSMUST00000055104.5|Tceal1|ENSMUSG00000049536.5|transcription elongation factor A (SII)-like 1
mm10_v2_chr10_+_91082940_91083028	0.0281554	Smad4	ENSMUST00000020150.3|Ikbip|ENSMUSG00000019975.5|IKBKB interacting protein
mm10_v2_chr15_-_38300693_38300715	0.0252326	Smad4	ENSMUST00000074043.5|Klf10|ENSMUSG00000037465.9|Kruppel-like factor 10
mm10_v2_chr11_-_102319093_102319105	0.0223048	Smad4	ENSMUST00000174302.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000178839.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000006754.7|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chr5_+_65537267_65537331	0.0196008	Smad4	ENSMUST00000122141.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chrX_+_41401476_41401565	0.0160543	Smad4	ENSMUST00000165288.1|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr2_+_127247908_127247997	0.0146958	Smad4	ENSMUST00000035871.8|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174503.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174288.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127
mm10_v2_chr5_+_19907502_19907551	0.0144435	Smad4	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr14_-_25903100_25903100	0.00678896	Smad4	ENSMUST00000052286.8|Plac9a|ENSMUSG00000095304.2|placenta specific 9a
mm10_v2_chr11_+_115420138_115420182	0.00592978	Smad4	ENSMUST00000106533.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2 	ENSMUST00000123345.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2
mm10_v2_chr10_-_92164666_92164754	0.0047533	Smad4	ENSMUST00000183123.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000182033.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr10_-_42583628_42583639	0.0019306	Smad4	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chrX_-_150588071_150588153	0.00123887	Smad4	ENSMUST00000140207.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112719.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112727.3|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112721.3|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000026303.9|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2
mm10_v2_chr15_-_93336800_93336852	0.000793622	Smad4	ENSMUST00000080299.6|Yaf2|ENSMUSG00000022634.9|YY1 associated factor 2
