mm10_v2_chr5_+_139543889_139543904	30.8577	Vsx2_Dlx3	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr6_-_23248264_23248390	19.464	Vsx2_Dlx3	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr2_-_168767136_168767201	10.7775	Vsx2_Dlx3	ENSMUST00000029061.5|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila) 	ENSMUST00000103074.1|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr2_-_168767029_168767104	7.57813	Vsx2_Dlx3	ENSMUST00000075044.3|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr3_+_159839729_159839745	7.51727	Vsx2_Dlx3	ENSMUST00000068952.5|Wls|ENSMUSG00000028173.6|wntless homolog (Drosophila)
mm10_v2_chr3_-_154328634_154328663	7.04372	Vsx2_Dlx3	ENSMUST00000167744.1|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8
mm10_v2_chr14_-_48662740_48662872	5.89176	Vsx2_Dlx3	ENSMUST00000122009.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr17_-_70853482_70853546	5.20295	Vsx2_Dlx3	ENSMUST00000118283.1|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr12_-_56535047_56535106	5.17749	Vsx2_Dlx3	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr7_-_49636847_49636851	5.08136	Vsx2_Dlx3	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr9_-_79977782_79977809	3.97568	Vsx2_Dlx3	ENSMUST00000093811.4|Filip1|ENSMUSG00000034898.9|filamin A interacting protein 1
mm10_v2_chr3_-_116253467_116253484	3.61708	Vsx2_Dlx3	ENSMUST00000090473.5|Gpr88|ENSMUSG00000068696.5|G-protein coupled receptor 88
mm10_v2_chr5_-_98566762_98566762	3.55535	Vsx2_Dlx3	ENSMUST00000086912.4|1700010H22Rik|ENSMUSG00000067101.4|RIKEN cDNA 1700010H22 gene
mm10_v2_chr3_+_55782500_55782521	3.44476	Vsx2_Dlx3	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr9_+_75775355_75775378	2.9796	Vsx2_Dlx3	ENSMUST00000012281.7|Bmp5|ENSMUSG00000032179.7|bone morphogenetic protein 5
mm10_v2_chr4_+_8690399_8690470	2.91949	Vsx2_Dlx3	ENSMUST00000127476.1|Chd7|ENSMUSG00000041235.5|chromodomain helicase DNA binding protein 7
mm10_v2_chr17_+_43952999_43953063	2.90045	Vsx2_Dlx3	ENSMUST00000177857.1|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr3_-_79841729_79841729	2.85194	Vsx2_Dlx3	ENSMUST00000168038.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr9_+_119063429_119063467	2.6473	Vsx2_Dlx3	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chr2_+_109917639_109917656	2.63938	Vsx2_Dlx3	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr14_-_122451109_122451121	2.42502	Vsx2_Dlx3	ENSMUST00000081580.2|Gm5089|ENSMUSG00000064052.2|predicted gene 5089
mm10_v2_chr18_+_82914632_82914664	2.35822	Vsx2_Dlx3	ENSMUST00000071233.6|Zfp516|ENSMUSG00000058881.6|zinc finger protein 516
mm10_v2_chr4_+_62583568_62583601	2.22974	Vsx2_Dlx3	ENSMUST00000098031.3|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3
mm10_v2_chr12_+_109545390_109545443	2.09044	Vsx2_Dlx3	ENSMUST00000146701.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr12_-_56613270_56613291	2.03402	Vsx2_Dlx3	ENSMUST00000072631.5|Nkx2-9|ENSMUSG00000058669.7|NK2 homeobox 9
mm10_v2_chr3_-_49757257_49757316	1.96906	Vsx2_Dlx3	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr15_+_25773985_25774042	1.93758	Vsx2_Dlx3	ENSMUST00000125667.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr8_-_61902669_61902713	1.91699	Vsx2_Dlx3	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr10_+_128337761_128337832	1.8579	Vsx2_Dlx3	ENSMUST00000005826.7|Cs|ENSMUSG00000005683.7|citrate synthase
mm10_v2_chr10_-_6980376_6980398	1.85161	Vsx2_Dlx3	ENSMUST00000105617.1|Ipcef1|ENSMUSG00000064065.9|interaction protein for cytohesin exchange factors 1
mm10_v2_chr3_-_88410295_88410351	1.84994	Vsx2_Dlx3	ENSMUST00000056370.7|Pmf1|ENSMUSG00000028066.10|polyamine-modulated factor 1
mm10_v2_chr13_-_102905740_102905814	1.83403	Vsx2_Dlx3	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr6_-_147264124_147264167	1.73703	Vsx2_Dlx3	ENSMUST00000052296.6|Pthlh|ENSMUSG00000048776.6|parathyroid hormone-like peptide
mm10_v2_chr8_-_57653023_57653039	1.66592	Vsx2_Dlx3	ENSMUST00000034021.5|Galnt7|ENSMUSG00000031608.7|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
mm10_v2_chr4_-_129261394_129261406	1.66564	Vsx2_Dlx3	ENSMUST00000145261.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr13_-_102906046_102906111	1.64812	Vsx2_Dlx3	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr7_+_144838590_144838614	1.63556	Vsx2_Dlx3	ENSMUST00000105898.1|Fgf3|ENSMUSG00000031074.8|fibroblast growth factor 3
mm10_v2_chr13_-_100616911_100616981	1.60925	Vsx2_Dlx3	ENSMUST00000168772.1|Marveld2|ENSMUSG00000021636.8|MARVEL (membrane-associating) domain containing 2 	ENSMUST00000163163.1|Marveld2|ENSMUSG00000021636.8|MARVEL (membrane-associating) domain containing 2 	ENSMUST00000022137.7|Marveld2|ENSMUSG00000021636.8|MARVEL (membrane-associating) domain containing 2
mm10_v2_chr4_-_132510493_132510509	1.58709	Vsx2_Dlx3	ENSMUST00000030724.8|Sesn2|ENSMUSG00000028893.8|sestrin 2
mm10_v2_chr1_+_10993452_10993478	1.58643	Vsx2_Dlx3	ENSMUST00000027056.5|Prex2|ENSMUSG00000048960.7|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
mm10_v2_chr1_+_109983737_109983737	1.5688	Vsx2_Dlx3	ENSMUST00000172005.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr1_-_72874877_72874891	1.55572	Vsx2_Dlx3	ENSMUST00000027377.8|Igfbp5|ENSMUSG00000026185.8|insulin-like growth factor binding protein 5
mm10_v2_chr4_-_41464816_41464892	1.54341	Vsx2_Dlx3	ENSMUST00000108055.2|Kif24|ENSMUSG00000028438.10|kinesin family member 24 	ENSMUST00000154535.1|Kif24|ENSMUSG00000028438.10|kinesin family member 24 	ENSMUST00000030148.5|Kif24|ENSMUSG00000028438.10|kinesin family member 24
mm10_v2_chr2_+_9882622_9882646	1.44333	Vsx2_Dlx3	ENSMUST00000114919.1|4930412O13Rik|ENSMUSG00000025783.2|RIKEN cDNA 4930412O13 gene
mm10_v2_chr5_-_116288944_116288977	1.44058	Vsx2_Dlx3	ENSMUST00000086483.3|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr3_+_122419772_122419787	1.32923	Vsx2_Dlx3	ENSMUST00000029766.4|Bcar3|ENSMUSG00000028121.4|breast cancer anti-estrogen resistance 3
mm10_v2_chr3_+_5218546_5218561	1.31454	Vsx2_Dlx3	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr1_-_190170671_190170744	1.31023	Vsx2_Dlx3	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr3_+_5218516_5218544	1.27775	Vsx2_Dlx3	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr8_-_45382198_45382291	1.22455	Vsx2_Dlx3	ENSMUST00000093526.6|Fam149a|ENSMUSG00000070044.9|family with sequence similarity 149, member A
mm10_v2_chrX_+_107255878_107256064	1.21219	Vsx2_Dlx3	ENSMUST00000101294.2|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174 	ENSMUST00000118820.1|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174 	ENSMUST00000120971.1|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174
mm10_v2_chr17_+_17402672_17402771	1.20785	Vsx2_Dlx3	ENSMUST00000115576.2|Lix1|ENSMUSG00000047786.12|limb expression 1 homolog (chicken)
mm10_v2_chr12_+_38780817_38780854	1.20675	Vsx2_Dlx3	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr3_+_5218589_5218614	1.19677	Vsx2_Dlx3	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr5_+_138187485_138187521	1.14513	Vsx2_Dlx3	ENSMUST00000110934.2|Cnpy4|ENSMUSG00000036968.9|canopy 4 homolog (zebrafish)
mm10_v2_chr17_-_70998010_70998013	1.12732	Vsx2_Dlx3	ENSMUST00000024846.6|Myl12a|ENSMUSG00000024048.8|myosin, light chain 12A, regulatory, non-sarcomeric
mm10_v2_chr4_+_82065855_82065876	1.1239	Vsx2_Dlx3	ENSMUST00000151038.1|Gm5860|ENSMUSG00000085022.2|predicted gene 5860
mm10_v2_chr7_-_115846080_115846112	1.12099	Vsx2_Dlx3	ENSMUST00000166207.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr10_-_53647080_53647080	1.11975	Vsx2_Dlx3	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr6_+_30541582_30541650	1.11731	Vsx2_Dlx3	ENSMUST00000096066.4|Cpa2|ENSMUSG00000071553.4|carboxypeptidase A2, pancreatic
mm10_v2_chr11_+_94327984_94328029	1.11014	Vsx2_Dlx3	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr7_-_116031047_116031122	1.05319	Vsx2_Dlx3	ENSMUST00000106612.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chrM_+_7005_7022	1.02186	Vsx2_Dlx3	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr5_-_138187177_138187237	1.00673	Vsx2_Dlx3	ENSMUST00000110937.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000139276.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000048698.7|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000123415.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chrX_-_60893430_60893440	0.995954	Vsx2_Dlx3	ENSMUST00000135107.2|Sox3|ENSMUSG00000045179.8|SRY-box containing gene 3
mm10_v2_chr18_-_66022580_66022600	0.988805	Vsx2_Dlx3	ENSMUST00000143990.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr4_+_99955715_99955744	0.981113	Vsx2_Dlx3	ENSMUST00000102783.4|Pgm2|ENSMUSG00000025791.12|phosphoglucomutase 2
mm10_v2_chr9_-_106891401_106891438	0.929778	Vsx2_Dlx3	ENSMUST00000069036.7|Manf|ENSMUSG00000032575.10|mesencephalic astrocyte-derived neurotrophic factor
mm10_v2_chr12_+_38780284_38780349	0.924201	Vsx2_Dlx3	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr11_-_102579461_102579538	0.881588	Vsx2_Dlx3	ENSMUST00000107081.1|Gm11627|ENSMUSG00000078640.3|predicted gene 11627
mm10_v2_chr5_-_116288978_116288999	0.875695	Vsx2_Dlx3	ENSMUST00000050178.6|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr10_+_73821857_73821883	0.826144	Vsx2_Dlx3	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr1_-_84839304_84839321	0.822914	Vsx2_Dlx3	ENSMUST00000027421.6|Trip12|ENSMUSG00000026219.8|thyroid hormone receptor interactor 12
mm10_v2_chr7_+_123123870_123123901	0.82267	Vsx2_Dlx3	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr12_-_31713873_31713947	0.803659	Vsx2_Dlx3	ENSMUST00000057783.4|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000174480.2|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000176710.1|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22
mm10_v2_chr16_+_34690548_34690616	0.801509	Vsx2_Dlx3	ENSMUST00000023532.6|Ccdc14|ENSMUSG00000022833.6|coiled-coil domain containing 14
mm10_v2_chr11_-_102185239_102185316	0.754757	Vsx2_Dlx3	ENSMUST00000021297.5|Lsm12|ENSMUSG00000020922.5|LSM12 homolog (S. cerevisiae)
mm10_v2_chr18_-_80986578_80986578	0.75111	Vsx2_Dlx3	ENSMUST00000057950.7|Sall3|ENSMUSG00000024565.8|sal-like 3 (Drosophila)
mm10_v2_chr17_-_35697971_35698001	0.737384	Vsx2_Dlx3	ENSMUST00000146472.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr11_+_62077018_62077101	0.728758	Vsx2_Dlx3	ENSMUST00000092415.5|Specc1|ENSMUSG00000042331.7|sperm antigen with calponin homology and coiled-coil domains 1
mm10_v2_chr6_+_108065035_108065053	0.72632	Vsx2_Dlx3	ENSMUST00000049246.6|Setmar|ENSMUSG00000034639.6|SET domain without mariner transposase fusion
mm10_v2_chr10_-_86011833_86011896	0.718591	Vsx2_Dlx3	ENSMUST00000105304.1|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C 	ENSMUST00000061699.5|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C
mm10_v2_chr2_-_121235689_121235846	0.659365	Vsx2_Dlx3	ENSMUST00000142400.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr3_+_122274371_122274415	0.647407	Vsx2_Dlx3	ENSMUST00000035776.8|Dnttip2|ENSMUSG00000039756.8|deoxynucleotidyltransferase, terminal, interacting protein 2
mm10_v2_chr6_+_73248382_73248382	0.617542	Vsx2_Dlx3	ENSMUST00000064740.6|Suclg1|ENSMUSG00000052738.8|succinate-CoA ligase, GDP-forming, alpha subunit
mm10_v2_chr9_-_21312255_21312333	0.612816	Vsx2_Dlx3	ENSMUST00000115433.3|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit 	ENSMUST00000003397.7|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit
mm10_v2_chr1_-_172027269_172027313	0.610535	Vsx2_Dlx3	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr11_+_60537978_60538074	0.598966	Vsx2_Dlx3	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr12_+_38781093_38781129	0.59782	Vsx2_Dlx3	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr8_-_120228221_120228297	0.594512	Vsx2_Dlx3	ENSMUST00000183235.1|A330074K22Rik|ENSMUSG00000097960.1|RIKEN cDNA A330074K22 gene
mm10_v2_chr16_-_89818338_89818356	0.553404	Vsx2_Dlx3	ENSMUST00000164263.2|Tiam1|ENSMUSG00000002489.9|T cell lymphoma invasion and metastasis 1
mm10_v2_chr1_-_163725123_163725232	0.422016	Vsx2_Dlx3	ENSMUST00000159679.1|Mettl11b|ENSMUSG00000040113.8|methyltransferase like 11B
mm10_v2_chr2_-_59948155_59948216	0.41911	Vsx2_Dlx3	ENSMUST00000153136.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr2_-_69712461_69712606	0.405117	Vsx2_Dlx3	ENSMUST00000102706.3|Fastkd1|ENSMUSG00000027086.10|FAST kinase domains 1 	ENSMUST00000073152.6|Fastkd1|ENSMUSG00000027086.10|FAST kinase domains 1
mm10_v2_chr7_-_73541738_73541758	0.395554	Vsx2_Dlx3	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr4_-_110292719_110292732	0.376363	Vsx2_Dlx3	ENSMUST00000106601.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr9_-_37147257_37147323	0.352898	Vsx2_Dlx3	ENSMUST00000039674.5|Pknox2|ENSMUSG00000035934.9|Pbx/knotted 1 homeobox 2 	ENSMUST00000080754.5|Pknox2|ENSMUSG00000035934.9|Pbx/knotted 1 homeobox 2
mm10_v2_chr15_+_44428073_44428174	0.349636	Vsx2_Dlx3	ENSMUST00000060652.3|Eny2|ENSMUSG00000022338.6|enhancer of yellow 2 homolog (Drosophila)
mm10_v2_chr14_+_32321987_32322042	0.342011	Vsx2_Dlx3	ENSMUST00000022480.7|Ogdhl|ENSMUSG00000021913.7|oxoglutarate dehydrogenase-like
mm10_v2_chr17_+_45734506_45734630	0.301374	Vsx2_Dlx3	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr4_-_110286581_110286617	0.299396	Vsx2_Dlx3	ENSMUST00000138972.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr4_-_83285141_83285169	0.286616	Vsx2_Dlx3	ENSMUST00000150522.1|Ttc39b|ENSMUSG00000038172.8|tetratricopeptide repeat domain 39B
mm10_v2_chr10_+_99263224_99263240	0.274397	Vsx2_Dlx3	ENSMUST00000020118.4|Dusp6|ENSMUSG00000019960.7|dual specificity phosphatase 6
mm10_v2_chr2_-_71055534_71055611	0.266995	Vsx2_Dlx3	ENSMUST00000090849.5|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000100037.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000112186.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8
mm10_v2_chr7_-_5014645_5014697	0.254231	Vsx2_Dlx3	ENSMUST00000165320.1|Fiz1|ENSMUSG00000061374.7|Flt3 interacting zinc finger protein 1
mm10_v2_chr11_-_82890541_82890626	0.251258	Vsx2_Dlx3	ENSMUST00000092844.6|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000021033.9|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000018985.8|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D
mm10_v2_chr11_-_33203588_33203599	0.245976	Vsx2_Dlx3	ENSMUST00000037746.6|Tlx3|ENSMUSG00000040610.6|T cell leukemia, homeobox 3
mm10_v2_chr9_+_94669876_94669928	0.228346	Vsx2_Dlx3	ENSMUST00000033463.9|Slc9a9|ENSMUSG00000031129.9|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm10_v2_chr9_-_71163224_71163293	0.218161	Vsx2_Dlx3	ENSMUST00000074465.2|Aqp9|ENSMUSG00000032204.7|aquaporin 9
mm10_v2_chr12_+_52699297_52699411	0.216336	Vsx2_Dlx3	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr2_-_27475622_27475698	0.200719	Vsx2_Dlx3	ENSMUST00000138693.1|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000113941.2|Brd3|ENSMUSG00000026918.10|bromodomain containing 3 	ENSMUST00000077737.6|Brd3|ENSMUSG00000026918.10|bromodomain containing 3
mm10_v2_chr11_-_102579071_102579119	0.186115	Vsx2_Dlx3	ENSMUST00000107080.1|Gm11627|ENSMUSG00000078640.3|predicted gene 11627
mm10_v2_chr15_+_81744848_81744848	0.176707	Vsx2_Dlx3	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr11_-_106301801_106301865	0.17161	Vsx2_Dlx3	ENSMUST00000103071.3|Gh|ENSMUSG00000020713.6|growth hormone
mm10_v2_chr18_-_44662251_44662266	0.156446	Vsx2_Dlx3	ENSMUST00000164666.1|Mcc|ENSMUSG00000071856.4|mutated in colorectal cancers
mm10_v2_chr17_-_81065056_81065099	0.154417	Vsx2_Dlx3	ENSMUST00000025093.4|Thumpd2|ENSMUSG00000024246.8|THUMP domain containing 2
mm10_v2_chr1_-_79440039_79440090	0.14619	Vsx2_Dlx3	ENSMUST00000049972.4|Scg2|ENSMUSG00000050711.6|secretogranin II
mm10_v2_chr1_+_66468364_66468435	0.138577	Vsx2_Dlx3	ENSMUST00000061620.9|Unc80|ENSMUSG00000055567.10|unc-80 homolog (C. elegans)
mm10_v2_chr1_-_182282738_182282807	0.117769	Vsx2_Dlx3	ENSMUST00000035295.5|Degs1|ENSMUSG00000038633.5|degenerative spermatocyte homolog 1 (Drosophila)
mm10_v2_chr3_+_94837702_94837723	0.0731684	Vsx2_Dlx3	ENSMUST00000107266.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000042402.5|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000107269.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr15_+_98571004_98571026	0.0375217	Vsx2_Dlx3	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr9_-_65885024_65885069	0.0352666	Vsx2_Dlx3	ENSMUST00000122410.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000117083.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4
mm10_v2_chr5_+_27261916_27261980	0.0323318	Vsx2_Dlx3	ENSMUST00000101471.3|Dpp6|ENSMUSG00000061576.9|dipeptidylpeptidase 6
mm10_v2_chr12_+_108605757_108605814	0.0202263	Vsx2_Dlx3	ENSMUST00000109854.2|Evl|ENSMUSG00000021262.8|Ena-vasodilator stimulated phosphoprotein
mm10_v2_chr14_-_12345847_12345872	0.0167334	Vsx2_Dlx3	ENSMUST00000022262.4|Fezf2|ENSMUSG00000021743.5|Fez family zinc finger 2
mm10_v2_chr1_-_175491130_175491130	0.00709075	Vsx2_Dlx3	ENSMUST00000027812.5|Rgs7|ENSMUSG00000026527.8|regulator of G protein signaling 7
