Motif ID: Arid3a

Z-value: 0.538


Transcription factors associated with Arid3a:

Gene SymbolEntrez IDGene Name
Arid3a ENSMUSG00000019564.6 Arid3a

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Arid3amm10_v2_chr10_+_79927330_79927370-0.747.0e-07Click!


Activity profile for motif Arid3a.

activity profile for motif Arid3a


Sorted Z-values histogram for motif Arid3a

Sorted Z-values for motif Arid3a



Network of associatons between targets according to the STRING database.



First level regulatory network of Arid3a

PNG image of the network

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Top targets:


Showing 1 to 20 of 84 entries
PromoterScoreRefseqGene SymbolGene Name
chr12_-_24493656 3.258 ENSMUST00000073088.2
 Gm16372
predicted pseudogene 16372
chr5_-_70842617 2.656 ENSMUST00000031119.1
 Gabrg1
gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
chr12_-_108003414 2.004 ENSMUST00000109887.1
ENSMUST00000109891.2
 Bcl11b

B cell leukemia/lymphoma 11B

chr1_+_17145357 1.996 ENSMUST00000026879.7
 Gdap1
ganglioside-induced differentiation-associated-protein 1
chr15_+_99006056 1.916 ENSMUST00000079818.3
 Gm8973
predicted gene 8973
chr11_-_110095937 1.734 ENSMUST00000106664.3
ENSMUST00000046223.7
ENSMUST00000106662.1
 Abca8a


ATP-binding cassette, sub-family A (ABC1), member 8a


chr1_+_179961110 1.516 ENSMUST00000076687.5
ENSMUST00000097450.3
 Cdc42bpa

CDC42 binding protein kinase alpha

chr18_+_36939178 1.485 ENSMUST00000115662.2
 Pcdha2
protocadherin alpha 2
chr18_-_6241486 1.421 ENSMUST00000025083.7
 Kif5b
kinesin family member 5B
chr2_-_32982007 1.401 ENSMUST00000028129.7
 Slc2a8
solute carrier family 2, (facilitated glucose transporter), member 8
chr1_-_150392719 1.321 ENSMUST00000006167.6
ENSMUST00000094477.2
ENSMUST00000097547.3
 BC003331


cDNA sequence BC003331


chr10_+_123264076 1.300 ENSMUST00000050756.7
 Fam19a2
family with sequence similarity 19, member A2
chr14_+_120275669 1.262 ENSMUST00000088419.6
ENSMUST00000167459.1
 Mbnl2

muscleblind-like 2

chr1_+_179960472 1.210 ENSMUST00000097453.2
ENSMUST00000111117.1
 Cdc42bpa

CDC42 binding protein kinase alpha

chr12_-_4769217 1.201 ENSMUST00000053458.5
 Fam228b
family with sequence similarity 228, member B
chr4_+_141368116 1.199 ENSMUST00000006380.4
 Fam131c
family with sequence similarity 131, member C
chr11_-_116654245 1.180 ENSMUST00000021166.5
 Cygb
cytoglobin
chr13_-_23762378 1.170 ENSMUST00000091701.2
 Hist1h3a
histone cluster 1, H3a
chr10_+_69533761 1.137 ENSMUST00000182884.1
 Ank3
ankyrin 3, epithelial
chrX_+_163911401 1.108 ENSMUST00000140845.1
 Ap1s2
adaptor-related protein complex 1, sigma 2 subunit

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 32 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.5 3.0 GO:0021773 striatal medium spiny neuron differentiation(GO:0021773)
0.1 2.8 GO:0007214 gamma-aminobutyric acid signaling pathway(GO:0007214)
0.1 2.7 GO:0007097 nuclear migration(GO:0007097)
0.6 2.2 GO:0035617 stress granule disassembly(GO:0035617)
0.1 2.0 GO:0008053 mitochondrial fusion(GO:0008053)
0.2 1.6 GO:0007379 segment specification(GO:0007379)
0.1 1.5 GO:0010650 positive regulation of cell communication by electrical coupling(GO:0010650) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)
0.5 1.4 GO:0044028 DNA hypomethylation(GO:0044028) hypomethylation of CpG island(GO:0044029)
0.0 1.4 GO:0046323 glucose import(GO:0046323)
0.0 1.3 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.2 1.2 GO:0015671 oxygen transport(GO:0015671)
0.0 1.2 GO:0034723 DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.0 1.1 GO:0036465 synaptic vesicle recycling(GO:0036465)
0.1 1.0 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 1.0 GO:0007257 activation of JUN kinase activity(GO:0007257)
0.1 0.8 GO:0061032 visceral serous pericardium development(GO:0061032)
0.2 0.7 GO:0032240 RNA import into nucleus(GO:0006404) mRNA export from nucleus in response to heat stress(GO:0031990) negative regulation of nucleobase-containing compound transport(GO:0032240) negative regulation of RNA export from nucleus(GO:0046832)
0.0 0.6 GO:0060394 negative regulation of pathway-restricted SMAD protein phosphorylation(GO:0060394)
0.0 0.6 GO:0032728 positive regulation of interferon-beta production(GO:0032728)
0.1 0.5 GO:0072592 regulation of integrin biosynthetic process(GO:0045113) oxygen metabolic process(GO:0072592)

Gene overrepresentation in cellular_component category:

Showing 1 to 20 of 20 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 2.7 GO:1902710 GABA receptor complex(GO:1902710) GABA-A receptor complex(GO:1902711)
0.0 2.7 GO:0042641 actomyosin(GO:0042641)
0.1 2.2 GO:0035253 ciliary rootlet(GO:0035253)
0.1 2.0 GO:0031307 integral component of mitochondrial outer membrane(GO:0031307)
0.0 1.6 GO:0008023 transcription elongation factor complex(GO:0008023)
0.1 1.5 GO:0014731 spectrin-associated cytoskeleton(GO:0014731)
0.5 1.4 GO:0005943 phosphatidylinositol 3-kinase complex, class IA(GO:0005943)
0.0 1.2 GO:0000788 nuclear nucleosome(GO:0000788)
0.0 1.1 GO:0005905 clathrin-coated pit(GO:0005905)
0.0 1.0 GO:0030673 axolemma(GO:0030673)
0.0 0.8 GO:0002102 podosome(GO:0002102)
0.1 0.7 GO:0044615 nuclear pore nuclear basket(GO:0044615)
0.0 0.7 GO:0005891 voltage-gated calcium channel complex(GO:0005891)
0.1 0.5 GO:0071438 NADPH oxidase complex(GO:0043020) invadopodium membrane(GO:0071438)
0.1 0.4 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.4 GO:0001891 phagocytic cup(GO:0001891)
0.0 0.4 GO:0034451 centriolar satellite(GO:0034451)
0.1 0.3 GO:0031313 extrinsic component of endosome membrane(GO:0031313)
0.0 0.2 GO:0031315 extrinsic component of mitochondrial outer membrane(GO:0031315)
0.0 0.2 GO:0031143 pseudopodium(GO:0031143)

Gene overrepresentation in molecular_function category:

Showing 1 to 20 of 21 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 2.8 GO:0042626 ATPase activity, coupled to transmembrane movement of substances(GO:0042626)
0.1 2.7 GO:0050811 GABA-A receptor activity(GO:0004890) GABA receptor binding(GO:0050811)
0.1 2.2 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 2.0 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 1.5 GO:0008093 cytoskeletal adaptor activity(GO:0008093)
0.2 1.4 GO:0046934 phosphatidylinositol-4,5-bisphosphate 3-kinase activity(GO:0046934)
0.1 1.4 GO:0005536 glucose binding(GO:0005536)
0.3 1.2 GO:0004096 catalase activity(GO:0004096)
0.1 1.0 GO:0005078 MAP-kinase scaffold activity(GO:0005078)
0.0 1.0 GO:0003785 actin monomer binding(GO:0003785)
0.2 0.8 GO:0008131 primary amine oxidase activity(GO:0008131)
0.1 0.7 GO:0070840 dynein complex binding(GO:0070840)
0.0 0.7 GO:0008331 high voltage-gated calcium channel activity(GO:0008331)
0.0 0.6 GO:0034713 type I transforming growth factor beta receptor binding(GO:0034713)
0.2 0.5 GO:0030171 voltage-gated proton channel activity(GO:0030171)
0.1 0.4 GO:0030226 apolipoprotein receptor activity(GO:0030226) apolipoprotein A-I receptor activity(GO:0034188)
0.0 0.4 GO:0071889 14-3-3 protein binding(GO:0071889)
0.0 0.3 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.0 0.3 GO:0005545 1-phosphatidylinositol binding(GO:0005545)
0.1 0.2 GO:0031896 V2 vasopressin receptor binding(GO:0031896)