Motif ID: Hoxa13

Z-value: 0.633


Transcription factors associated with Hoxa13:

Gene SymbolEntrez IDGene Name
Hoxa13 ENSMUSG00000038203.12 Hoxa13



Activity profile for motif Hoxa13.

activity profile for motif Hoxa13


Sorted Z-values histogram for motif Hoxa13

Sorted Z-values for motif Hoxa13



Network of associatons between targets according to the STRING database.



First level regulatory network of Hoxa13

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Top targets:


Showing 1 to 20 of 200 entries
PromoterScoreRefseqGene SymbolGene Name
chr5_-_28467093 3.753 ENSMUST00000002708.3
 Shh
sonic hedgehog
chr19_+_44493472 2.958 ENSMUST00000041163.4
 Wnt8b
wingless related MMTV integration site 8b
chr12_+_33957645 2.237 ENSMUST00000049089.5
 Twist1
twist basic helix-loop-helix transcription factor 1
chr11_+_120948480 2.233 ENSMUST00000070653.6
 Slc16a3
solute carrier family 16 (monocarboxylic acid transporters), member 3
chrY_-_1286563 1.939 ENSMUST00000091190.5
 Ddx3y
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
chr16_-_26989974 1.890 ENSMUST00000089832.4
 Gmnc
geminin coiled-coil domain containing
chr5_+_139543889 1.888 ENSMUST00000174792.1
ENSMUST00000031523.8
 Uncx

UNC homeobox

chrY_+_897782 1.797 ENSMUST00000055032.7
 Kdm5d
lysine (K)-specific demethylase 5D
chr3_-_154330543 1.648 ENSMUST00000184966.1
ENSMUST00000177846.2
 Lhx8

LIM homeobox protein 8

chr16_-_22161450 1.623 ENSMUST00000115379.1
 Igf2bp2
insulin-like growth factor 2 mRNA binding protein 2
chr2_-_18048784 1.612 ENSMUST00000142856.1
 Skida1
SKI/DACH domain containing 1
chr5_+_92809372 1.512 ENSMUST00000113054.2
 Shroom3
shroom family member 3
chr3_-_49757257 1.372 ENSMUST00000035931.7
 Pcdh18
protocadherin 18
chr12_-_54986328 1.371 ENSMUST00000038926.6
 Baz1a
bromodomain adjacent to zinc finger domain 1A
chr17_-_25844417 1.322 ENSMUST00000176591.1
 Rhot2
ras homolog gene family, member T2
chr1_+_137928100 1.297 ENSMUST00000054333.2
 A130050O07Rik
RIKEN cDNA A130050O07 gene
chr9_-_114781986 1.283 ENSMUST00000035009.8
ENSMUST00000084867.7
 Cmtm7

CKLF-like MARVEL transmembrane domain containing 7

chr19_+_24875679 1.282 ENSMUST00000073080.5
 Gm10053
predicted gene 10053
chr10_+_26229707 1.251 ENSMUST00000060716.5
ENSMUST00000164660.1
 Samd3

sterile alpha motif domain containing 3

chr13_-_3893556 1.223 ENSMUST00000099946.4
 Net1
neuroepithelial cell transforming gene 1

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 148 entries
Log-likelihood per target Total log-likelihoodTermDescription
1.3 3.8 GO:0060769 positive regulation of epithelial cell proliferation involved in prostate gland development(GO:0060769) kidney smooth muscle tissue development(GO:0072194) negative regulation of dopaminergic neuron differentiation(GO:1904339)
0.0 2.4 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.0 2.4 GO:0006261 DNA-dependent DNA replication(GO:0006261)
0.6 2.2 GO:0033128 negative regulation of histone phosphorylation(GO:0033128)
0.5 2.1 GO:0035606 peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.1 2.1 GO:0034643 establishment of mitochondrion localization, microtubule-mediated(GO:0034643) mitochondrion transport along microtubule(GO:0047497)
0.2 1.9 GO:0035726 common myeloid progenitor cell proliferation(GO:0035726)
0.4 1.8 GO:0006526 arginine biosynthetic process(GO:0006526)
0.4 1.8 GO:0002457 T cell antigen processing and presentation(GO:0002457)
0.2 1.8 GO:1903504 regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) regulation of mitotic spindle checkpoint(GO:1903504)
0.1 1.6 GO:0006270 DNA replication initiation(GO:0006270)
0.4 1.5 GO:0090324 negative regulation of oxidative phosphorylation(GO:0090324)
0.2 1.5 GO:0006177 GMP biosynthetic process(GO:0006177)
0.1 1.5 GO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339)
0.0 1.4 GO:0021884 forebrain neuron development(GO:0021884)
0.3 1.3 GO:0006529 asparagine biosynthetic process(GO:0006529)
0.3 1.3 GO:0002337 B-1a B cell differentiation(GO:0002337)
0.1 1.3 GO:0034063 stress granule assembly(GO:0034063)
0.3 1.2 GO:0003347 epicardial cell to mesenchymal cell transition(GO:0003347)
0.2 1.2 GO:0046864 retinol transport(GO:0034633) isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865) alveolar primary septum development(GO:0061143)

Gene overrepresentation in cellular_component category:

Showing 1 to 20 of 68 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 3.6 GO:0036464 cytoplasmic ribonucleoprotein granule(GO:0036464)
0.0 3.0 GO:0016363 nuclear matrix(GO:0016363)
0.5 2.4 GO:0008623 CHRAC(GO:0008623)
0.0 2.3 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.3 2.1 GO:0097452 GAIT complex(GO:0097452)
0.1 2.1 GO:0031307 integral component of mitochondrial outer membrane(GO:0031307)
0.3 1.6 GO:0001674 female germ cell nucleus(GO:0001674)
0.0 1.6 GO:0016459 myosin complex(GO:0016459)
0.1 1.3 GO:0005682 U5 snRNP(GO:0005682)
0.0 1.3 GO:0005844 polysome(GO:0005844)
0.1 1.2 GO:0031080 nuclear pore outer ring(GO:0031080)
0.0 1.2 GO:0000313 organellar ribosome(GO:0000313) mitochondrial ribosome(GO:0005761)
0.1 1.1 GO:0042788 polysomal ribosome(GO:0042788)
0.1 1.0 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.0 1.0 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.2 0.9 GO:0090537 CERF complex(GO:0090537)
0.2 0.9 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.1 0.9 GO:0046930 pore complex(GO:0046930)
0.0 0.9 GO:0030894 replisome(GO:0030894)
0.0 0.9 GO:0005758 mitochondrial intermembrane space(GO:0005758)

Gene overrepresentation in molecular_function category:

Showing 1 to 20 of 121 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.8 3.8 GO:0005113 patched binding(GO:0005113)
0.1 2.7 GO:0005109 frizzled binding(GO:0005109)
0.0 2.6 GO:0003735 structural constituent of ribosome(GO:0003735)
0.7 2.1 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.0 1.9 GO:0008186 ATP-dependent RNA helicase activity(GO:0004004) RNA-dependent ATPase activity(GO:0008186)
0.4 1.8 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.3 1.8 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453)
0.0 1.8 GO:0101005 thiol-dependent ubiquitinyl hydrolase activity(GO:0036459) ubiquitinyl hydrolase activity(GO:0101005)
0.1 1.6 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.4 1.5 GO:0003938 IMP dehydrogenase activity(GO:0003938)
0.1 1.4 GO:0016805 dipeptidase activity(GO:0016805)
0.1 1.4 GO:0031404 voltage-gated chloride channel activity(GO:0005247) chloride ion binding(GO:0031404)
0.3 1.3 GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity(GO:0004066)
0.1 1.2 GO:0017049 GTP-Rho binding(GO:0017049)
0.0 1.2 GO:0051183 vitamin transporter activity(GO:0051183)
0.0 1.2 GO:0005487 nucleocytoplasmic transporter activity(GO:0005487)
0.2 1.1 GO:0005005 transmembrane-ephrin receptor activity(GO:0005005)
0.1 1.1 GO:0008097 5S rRNA binding(GO:0008097)
0.1 1.1 GO:0033677 DNA/RNA helicase activity(GO:0033677)
0.0 1.1 GO:0001106 RNA polymerase II transcription corepressor activity(GO:0001106)