Motif ID: Hoxc9

Z-value: 0.627


Transcription factors associated with Hoxc9:

Gene SymbolEntrez IDGene Name
Hoxc9 ENSMUSG00000036139.6 Hoxc9

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Hoxc9mm10_v2_chr15_+_102977032_102977032-0.057.9e-01Click!


Activity profile for motif Hoxc9.

activity profile for motif Hoxc9


Sorted Z-values histogram for motif Hoxc9

Sorted Z-values for motif Hoxc9



Network of associatons between targets according to the STRING database.



First level regulatory network of Hoxc9

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Top targets:


Showing 1 to 20 of 69 entries
PromoterScoreRefseqGene SymbolGene Name
chr2_+_102658640 2.392 ENSMUST00000080210.3
 Slc1a2
solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr17_-_49564262 1.650 ENSMUST00000057610.6
 Daam2
dishevelled associated activator of morphogenesis 2
chr9_+_35423582 1.484 ENSMUST00000154652.1
 Cdon
cell adhesion molecule-related/down-regulated by oncogenes
chr2_-_26516620 1.467 ENSMUST00000132820.1
 Notch1
notch 1
chr4_+_136143497 1.293 ENSMUST00000008016.2
 Id3
inhibitor of DNA binding 3
chr10_+_4710119 1.199 ENSMUST00000105588.1
ENSMUST00000105589.1
 Esr1

estrogen receptor 1 (alpha)

chrX_+_56609751 1.140 ENSMUST00000144068.1
 Slc9a6
solute carrier family 9 (sodium/hydrogen exchanger), member 6
chr2_+_70474923 1.078 ENSMUST00000100043.2
 Sp5
trans-acting transcription factor 5
chrX_-_143933089 1.023 ENSMUST00000087313.3
 Dcx
doublecortin
chr13_+_94083490 1.016 ENSMUST00000156071.1
 Lhfpl2
lipoma HMGIC fusion partner-like 2
chr7_-_116038734 0.990 ENSMUST00000166877.1
 Sox6
SRY-box containing gene 6
chr4_+_107830958 0.922 ENSMUST00000106731.2
 Lrp8
low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr1_+_66321708 0.864 ENSMUST00000114013.1
 Map2
microtubule-associated protein 2
chr18_+_65582239 0.835 ENSMUST00000182684.1
 Zfp532
zinc finger protein 532
chr2_+_128967383 0.655 ENSMUST00000110320.2
ENSMUST00000110319.2
 Zc3h6

zinc finger CCCH type containing 6

chr1_+_187997821 0.625 ENSMUST00000027906.6
 Esrrg
estrogen-related receptor gamma
chr4_+_144893127 0.622 ENSMUST00000142808.1
 Dhrs3
dehydrogenase/reductase (SDR family) member 3
chr18_+_65582281 0.620 ENSMUST00000183319.1
 Zfp532
zinc finger protein 532
chrX_-_143933204 0.593 ENSMUST00000112851.1
ENSMUST00000112856.2
ENSMUST00000033642.3
 Dcx


doublecortin


chr1_+_58210397 0.584 ENSMUST00000040442.5
 Aox4
aldehyde oxidase 4

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 27 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 2.5 GO:0021819 layer formation in cerebral cortex(GO:0021819)
0.4 2.4 GO:0089711 L-glutamate transmembrane transport(GO:0089711)
0.2 1.6 GO:1990118 sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.5 1.5 GO:0003219 atrioventricular node development(GO:0003162) cardiac right ventricle formation(GO:0003219)
0.2 1.5 GO:0014816 skeletal muscle satellite cell differentiation(GO:0014816)
0.0 1.3 GO:0045662 negative regulation of myoblast differentiation(GO:0045662)
0.3 1.2 GO:0060745 mammary gland branching involved in pregnancy(GO:0060745)
0.2 1.2 GO:0060690 epithelial cell differentiation involved in salivary gland development(GO:0060690)
0.0 1.1 GO:0036342 post-anal tail morphogenesis(GO:0036342)
0.0 1.1 GO:0048384 retinoic acid receptor signaling pathway(GO:0048384)
0.1 1.0 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.2 0.6 GO:0046110 xanthine metabolic process(GO:0046110)
0.1 0.6 GO:0042572 retinol metabolic process(GO:0042572)
0.0 0.6 GO:0038063 collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063)
0.0 0.6 GO:0051044 positive regulation of membrane protein ectodomain proteolysis(GO:0051044)
0.2 0.5 GO:0043553 negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553)
0.0 0.5 GO:0051491 positive regulation of filopodium assembly(GO:0051491)
0.0 0.5 GO:0046676 negative regulation of insulin secretion(GO:0046676)
0.1 0.4 GO:0033566 gamma-tubulin complex localization(GO:0033566)
0.1 0.4 GO:1903225 negative regulation of endodermal cell differentiation(GO:1903225)

Gene overrepresentation in cellular_component category:

Showing 1 to 12 of 12 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 2.4 GO:0030673 axolemma(GO:0030673)
0.3 1.6 GO:0044308 axonal spine(GO:0044308)
0.1 1.6 GO:0035327 transcriptionally active chromatin(GO:0035327)
0.3 1.5 GO:0002193 MAML1-RBP-Jkappa- ICN1 complex(GO:0002193)
0.1 1.2 GO:0005915 zonula adherens(GO:0005915)
0.1 0.9 GO:0097442 CA3 pyramidal cell dendrite(GO:0097442)
0.1 0.6 GO:0005587 collagen type IV trimer(GO:0005587) network-forming collagen trimer(GO:0098642) collagen network(GO:0098645) basement membrane collagen trimer(GO:0098651)
0.1 0.4 GO:0005588 collagen type V trimer(GO:0005588)
0.0 0.4 GO:0000930 gamma-tubulin complex(GO:0000930)
0.0 0.4 GO:0042470 melanosome(GO:0042470) pigment granule(GO:0048770)
0.0 0.2 GO:0035631 CD40 receptor complex(GO:0035631)
0.0 0.1 GO:0030126 COPI vesicle coat(GO:0030126)

Gene overrepresentation in molecular_function category:

Showing 1 to 20 of 22 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.6 2.4 GO:0015501 glutamate:sodium symporter activity(GO:0015501)
0.0 1.7 GO:0017048 Rho GTPase binding(GO:0017048)
0.2 1.6 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451) sodium:proton antiporter activity(GO:0015385) potassium:proton antiporter activity(GO:0015386)
0.1 1.6 GO:0009931 calcium-dependent protein serine/threonine kinase activity(GO:0009931)
0.0 1.5 GO:0005112 Notch binding(GO:0005112)
0.0 1.3 GO:0005504 fatty acid binding(GO:0005504)
0.4 1.2 GO:0031798 type 1 metabotropic glutamate receptor binding(GO:0031798) RNA polymerase II transcription factor activity, estrogen-activated sequence-specific DNA binding(GO:0038052)
0.1 1.1 GO:0003708 retinoic acid receptor activity(GO:0003708)
0.2 0.9 GO:0038025 reelin receptor activity(GO:0038025)
0.1 0.9 GO:0005519 cytoskeletal regulatory protein binding(GO:0005519)
0.1 0.6 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.6 GO:0052650 NADP-retinol dehydrogenase activity(GO:0052650)
0.0 0.6 GO:0019855 calcium channel inhibitor activity(GO:0019855)
0.2 0.5 GO:0036313 phosphatidylinositol 3-kinase catalytic subunit binding(GO:0036313)
0.1 0.5 GO:0055100 adiponectin binding(GO:0055100)
0.0 0.5 GO:0045296 cadherin binding(GO:0045296)
0.1 0.4 GO:0010698 acetyltransferase activator activity(GO:0010698)
0.0 0.4 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.3 GO:0055106 ubiquitin-protein transferase regulator activity(GO:0055106)
0.0 0.1 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)