mm10_v2_chr6_-_23248264_23248390	5.76013	En1	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr19_+_60144682_60144697	4.58263	En1	ENSMUST00000065383.4|E330013P04Rik|ENSMUSG00000053117.4|RIKEN cDNA E330013P04 gene
mm10_v2_chr14_+_67234620_67234645	4.37712	En1	ENSMUST00000176029.1|Ebf2|ENSMUSG00000022053.7|early B cell factor 2
mm10_v2_chr12_+_109453455_109453660	3.97466	En1	ENSMUST00000109844.4|Dlk1|ENSMUSG00000040856.11|delta-like 1 homolog (Drosophila) 	ENSMUST00000109842.2|Dlk1|ENSMUSG00000040856.11|delta-like 1 homolog (Drosophila) 	ENSMUST00000109843.1|Dlk1|ENSMUSG00000040856.11|delta-like 1 homolog (Drosophila) 	ENSMUST00000109846.4|Dlk1|ENSMUSG00000040856.11|delta-like 1 homolog (Drosophila) 	ENSMUST00000173539.1|Dlk1|ENSMUSG00000040856.11|delta-like 1 homolog (Drosophila) 	ENSMUST00000109841.2|Dlk1|ENSMUSG00000040856.11|delta-like 1 homolog (Drosophila)
mm10_v2_chr15_+_102028216_102028235	3.77764	En1	ENSMUST00000023803.6|Krt18|ENSMUSG00000023043.6|keratin 18
mm10_v2_chr7_-_30973367_30973389	3.66424	En1	ENSMUST00000108116.3|Lsr|ENSMUSG00000001247.10|lipolysis stimulated lipoprotein receptor
mm10_v2_chr5_+_90772435_90772509	3.52163	En1	ENSMUST00000031320.6|Pf4|ENSMUSG00000029373.6|platelet factor 4
mm10_v2_chr16_-_26989974_26989974	3.30423	En1	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chr13_+_98354234_98354250	3.09681	En1	ENSMUST00000105098.3|Foxd1|ENSMUSG00000078302.3|forkhead box D1
mm10_v2_chr6_+_4755327_4755357	3.01273	En1	ENSMUST00000176551.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10
mm10_v2_chr12_+_109452833_109452849	2.97275	En1	ENSMUST00000056110.8|Dlk1|ENSMUSG00000040856.11|delta-like 1 homolog (Drosophila)
mm10_v2_chr2_+_174450678_174450708	2.73469	En1	ENSMUST00000016399.5|Tubb1|ENSMUSG00000016255.5|tubulin, beta 1 class VI
mm10_v2_chr10_-_120899067_120899101	2.67962	En1	ENSMUST00000092143.5|Msrb3|ENSMUSG00000051236.7|methionine sulfoxide reductase B3
mm10_v2_chr17_-_84682932_84683011	2.27602	En1	ENSMUST00000066175.3|Abcg5|ENSMUSG00000040505.7|ATP-binding cassette, sub-family G (WHITE), member 5
mm10_v2_chr4_-_129227883_129227923	2.2623	En1	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr1_-_87156127_87156165	2.25343	En1	ENSMUST00000160810.1|Ecel1|ENSMUSG00000026247.7|endothelin converting enzyme-like 1
mm10_v2_chr5_+_92925400_92925448	2.19013	En1	ENSMUST00000172706.1|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr17_-_70851189_70851216	2.16084	En1	ENSMUST00000059775.8|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr1_+_72824482_72824503	2.10768	En1	ENSMUST00000047328.4|Igfbp2|ENSMUSG00000039323.12|insulin-like growth factor binding protein 2
mm10_v2_chr4_-_129558387_129558398	1.95275	En1	ENSMUST00000067240.4|Lck|ENSMUSG00000000409.8|lymphocyte protein tyrosine kinase
mm10_v2_chr11_-_77725281_77725294	1.86908	En1	ENSMUST00000078623.4|Cryba1|ENSMUSG00000000724.10|crystallin, beta A1
mm10_v2_chr17_+_26542760_26542760	1.83162	En1	ENSMUST00000090257.4|Gm8225|ENSMUSG00000068604.4|predicted gene 8225
mm10_v2_chr15_-_85581809_85581821	1.81829	En1	ENSMUST00000023015.7|Wnt7b|ENSMUSG00000022382.8|wingless-related MMTV integration site 7B
mm10_v2_chr16_-_59555752_59555752	1.80134	En1	ENSMUST00000179383.1|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3 	ENSMUST00000044604.8|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3
mm10_v2_chr15_-_60824942_60825080	1.78498	En1	ENSMUST00000100635.3|Fam84b|ENSMUSG00000072568.3|family with sequence similarity 84, member B
mm10_v2_chr12_-_108893197_108893215	1.65142	En1	ENSMUST00000161154.1|Wars|ENSMUSG00000021266.10|tryptophanyl-tRNA synthetase 	ENSMUST00000161410.1|Wars|ENSMUSG00000021266.10|tryptophanyl-tRNA synthetase
mm10_v2_chr6_+_29859686_29859710	1.64315	En1	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr16_-_45953565_45953603	1.63701	En1	ENSMUST00000134802.1|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr4_-_43030440_43030593	1.62367	En1	ENSMUST00000135660.1|Stoml2|ENSMUSG00000028455.9|stomatin (Epb7.2)-like 2
mm10_v2_chr7_+_46841475_46841538	1.62163	En1	ENSMUST00000147535.1|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr17_-_45572495_45572555	1.61276	En1	ENSMUST00000130406.1|Hsp90ab1|ENSMUSG00000023944.8|heat shock protein 90 alpha (cytosolic), class B member 1
mm10_v2_chr6_+_65381294_65381294	1.59538	En1	ENSMUST00000170608.1|C130060K24Rik|ENSMUSG00000029917.9|RIKEN cDNA C130060K24 gene
mm10_v2_chr3_-_90243073_90243143	1.51999	En1	ENSMUST00000107369.1|Creb3l4|ENSMUSG00000027938.5|cAMP responsive element binding protein 3-like 4
mm10_v2_chr15_+_85510812_85510812	1.51821	En1	ENSMUST00000079690.2|Gm4825|ENSMUSG00000063548.2|predicted pseudogene 4825
mm10_v2_chr4_+_137468767_137468831	1.51658	En1	ENSMUST00000030547.8|Hspg2|ENSMUSG00000028763.11|perlecan (heparan sulfate proteoglycan 2) 	ENSMUST00000171332.1|Hspg2|ENSMUSG00000028763.11|perlecan (heparan sulfate proteoglycan 2)
mm10_v2_chr2_-_18037737_18037737	1.4518	En1	ENSMUST00000066163.2|A930004D18Rik|ENSMUSG00000054057.2|RIKEN cDNA A930004D18 gene
mm10_v2_chr16_-_45953493_45953562	1.44203	En1	ENSMUST00000136405.1|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr17_+_35841668_35841683	1.44191	En1	ENSMUST00000174124.1|Mdc1|ENSMUSG00000061607.8|mediator of DNA damage checkpoint 1
mm10_v2_chr4_+_128688726_128688795	1.42016	En1	ENSMUST00000106080.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr7_-_99238564_99238623	1.40144	En1	ENSMUST00000064231.7|Mogat2|ENSMUSG00000052396.7|monoacylglycerol O-acyltransferase 2
mm10_v2_chr11_+_28853189_28853259	1.33569	En1	ENSMUST00000020759.5|Efemp1|ENSMUSG00000020467.9|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm10_v2_chr18_-_62741387_62741387	1.33389	En1	ENSMUST00000097557.3|Spink13|ENSMUSG00000073551.3|serine peptidase inhibitor, Kazal type 13
mm10_v2_chrX_+_20617503_20617816	1.32486	En1	ENSMUST00000115375.1|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10 	ENSMUST00000115374.1|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10 	ENSMUST00000084383.3|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10
mm10_v2_chr2_+_3114220_3114225	1.31909	En1	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr4_-_41741301_41741359	1.27348	En1	ENSMUST00000071561.6|Sigmar1|ENSMUSG00000036078.10|sigma non-opioid intracellular receptor 1 	ENSMUST00000059354.8|Sigmar1|ENSMUSG00000036078.10|sigma non-opioid intracellular receptor 1
mm10_v2_chr16_-_45844303_45844381	1.24271	En1	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr19_+_47014672_47014698	1.22622	En1	ENSMUST00000037636.3|Ina|ENSMUSG00000034336.3|internexin neuronal intermediate filament protein, alpha
mm10_v2_chr9_+_106429537_106429548	1.22438	En1	ENSMUST00000059802.6|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chr2_-_28916412_28916440	1.22252	En1	ENSMUST00000050776.2|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila) 	ENSMUST00000113849.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr9_+_64117147_64117191	1.21051	En1	ENSMUST00000034969.7|Lctl|ENSMUSG00000032401.9|lactase-like
mm10_v2_chr12_-_10900296_10900318	1.19334	En1	ENSMUST00000085735.2|Pgk1-rs7|ENSMUSG00000066632.2|phosphoglycerate kinase-1, related sequence-7
mm10_v2_chr1_-_75046639_75046639	1.18119	En1	ENSMUST00000152855.1|Nhej1|ENSMUSG00000026162.6|nonhomologous end-joining factor 1
mm10_v2_chr9_+_106429399_106429457	1.17152	En1	ENSMUST00000150576.1|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chr4_-_116123618_116123695	1.14378	En1	ENSMUST00000102704.3|Rad54l|ENSMUSG00000028702.9|RAD54 like (S. cerevisiae) 	ENSMUST00000102705.3|Rad54l|ENSMUSG00000028702.9|RAD54 like (S. cerevisiae)
mm10_v2_chr2_-_156887172_156887225	1.13029	En1	ENSMUST00000109561.3|Sla2|ENSMUSG00000027636.5|Src-like-adaptor 2
mm10_v2_chr4_+_148041172_148041198	1.12704	En1	ENSMUST00000069604.8|Mthfr|ENSMUSG00000029009.11|5,10-methylenetetrahydrofolate reductase
mm10_v2_chr4_+_48540067_48540086	1.11124	En1	ENSMUST00000064807.2|Msantd3|ENSMUSG00000039693.5|Myb/SANT-like DNA-binding domain containing 3
mm10_v2_chr9_-_109849440_109849456	1.10316	En1	ENSMUST00000112022.2|Camp|ENSMUSG00000038357.8|cathelicidin antimicrobial peptide
mm10_v2_chr2_+_30286383_30286397	1.09998	En1	ENSMUST00000064447.5|Nup188|ENSMUSG00000052533.8|nucleoporin 188
mm10_v2_chr2_+_30286406_30286442	1.09665	En1	ENSMUST00000138666.1|Nup188|ENSMUSG00000052533.8|nucleoporin 188 	ENSMUST00000113634.2|Nup188|ENSMUSG00000052533.8|nucleoporin 188
mm10_v2_chr11_+_87595646_87595659	1.09329	En1	ENSMUST00000134216.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr11_-_116828000_116828071	1.06265	En1	ENSMUST00000047715.5|Mxra7|ENSMUSG00000020814.7|matrix-remodelling associated 7 	ENSMUST00000021170.2|Mxra7|ENSMUSG00000020814.7|matrix-remodelling associated 7
mm10_v2_chr11_-_94507337_94507355	1.03799	En1	ENSMUST00000040692.8|Mycbpap|ENSMUSG00000039110.8|MYCBP associated protein
mm10_v2_chr4_+_48539909_48539935	1.0259	En1	ENSMUST00000061135.1|Msantd3|ENSMUSG00000039693.5|Myb/SANT-like DNA-binding domain containing 3
mm10_v2_chr5_+_77310147_77310147	1.02461	En1	ENSMUST00000031167.5|Polr2b|ENSMUSG00000029250.5|polymerase (RNA) II (DNA directed) polypeptide B
mm10_v2_chr2_-_156887056_156887084	1.01607	En1	ENSMUST00000029164.2|Sla2|ENSMUSG00000027636.5|Src-like-adaptor 2
mm10_v2_chr6_+_29859662_29859685	1.0131	En1	ENSMUST00000128927.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr14_+_113314602_113314608	1.01203	En1	ENSMUST00000072359.6|Tpm3-rs7|ENSMUSG00000058126.6|tropomyosin 3, related sequence 7
mm10_v2_chr17_-_56290499_56290529	1.00608	En1	ENSMUST00000019726.6|Plin3|ENSMUSG00000024197.9|perilipin 3
mm10_v2_chr5_-_110779937_110779967	0.981637	En1	ENSMUST00000112426.1|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1
mm10_v2_chr9_+_115909455_115909455	0.967654	En1	ENSMUST00000119291.1|Gadl1|ENSMUSG00000056880.6|glutamate decarboxylase-like 1 	ENSMUST00000069651.6|Gadl1|ENSMUSG00000056880.6|glutamate decarboxylase-like 1
mm10_v2_chr19_-_15984970_15985018	0.964422	En1	ENSMUST00000047704.7|Cep78|ENSMUSG00000041491.7|centrosomal protein 78
mm10_v2_chr16_-_16869255_16869255	0.958781	En1	ENSMUST00000075017.4|Vpreb1|ENSMUSG00000059305.4|pre-B lymphocyte gene 1
mm10_v2_chrX_+_96455359_96455411	0.953062	En1	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr1_+_167001457_167001471	0.946179	En1	ENSMUST00000126198.1|Fam78b|ENSMUSG00000060568.8|family with sequence similarity 78, member B
mm10_v2_chr2_-_110362985_110363001	0.935154	En1	ENSMUST00000099626.3|Fibin|ENSMUSG00000074971.3|fin bud initiation factor homolog (zebrafish)
mm10_v2_chr13_+_99100698_99100719	0.932681	En1	ENSMUST00000181742.1|Gm807|ENSMUSG00000097848.1|predicted gene 807
mm10_v2_chr1_+_133045984_133046082	0.917096	En1	ENSMUST00000077730.5|Pik3c2b|ENSMUSG00000026447.10|phosphoinositide-3-kinase, class 2, beta polypeptide
mm10_v2_chr17_-_34862473_34862535	0.897779	En1	ENSMUST00000025229.4|Cfb|ENSMUSG00000090231.4|complement factor B 	ENSMUST00000176203.2|Cfb|ENSMUSG00000090231.4|complement factor B 	ENSMUST00000128767.1|Cfb|ENSMUSG00000090231.4|complement factor B
mm10_v2_chr4_+_152039315_152039356	0.893885	En1	ENSMUST00000084116.6|Nol9|ENSMUSG00000028948.10|nucleolar protein 9 	ENSMUST00000105663.1|Nol9|ENSMUSG00000028948.10|nucleolar protein 9 	ENSMUST00000103197.3|Nol9|ENSMUSG00000028948.10|nucleolar protein 9
mm10_v2_chr12_-_83921809_83921898	0.892806	En1	ENSMUST00000135962.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila) 	ENSMUST00000155112.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila) 	ENSMUST00000136848.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila) 	ENSMUST00000126943.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila)
mm10_v2_chr5_+_52582320_52582320	0.892175	En1	ENSMUST00000177881.1|Gm5866|ENSMUSG00000095078.1|predicted gene 5866
mm10_v2_chr1_+_6487231_6487338	0.88503	En1	ENSMUST00000140079.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131494.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr2_+_4976113_4976164	0.883409	En1	ENSMUST00000167607.1|Ucma|ENSMUSG00000026668.4|upper zone of growth plate and cartilage matrix associated 	ENSMUST00000115010.2|Ucma|ENSMUSG00000026668.4|upper zone of growth plate and cartilage matrix associated
mm10_v2_chrX_-_7319291_7319358	0.882531	En1	ENSMUST00000128319.1|Clcn5|ENSMUSG00000004317.8|chloride channel 5
mm10_v2_chr7_+_66060338_66060338	0.87833	En1	ENSMUST00000153609.1|Snrpa1|ENSMUSG00000030512.7|small nuclear ribonucleoprotein polypeptide A'
mm10_v2_chr11_+_80383397_80383415	0.861364	En1	ENSMUST00000053740.8|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr4_-_119320417_119320546	0.858393	En1	ENSMUST00000147077.1|Ppih|ENSMUSG00000060288.7|peptidyl prolyl isomerase H 	ENSMUST00000056458.7|Ppih|ENSMUSG00000060288.7|peptidyl prolyl isomerase H 	ENSMUST00000106321.2|Ppih|ENSMUSG00000060288.7|peptidyl prolyl isomerase H 	ENSMUST00000106319.1|Ppih|ENSMUSG00000060288.7|peptidyl prolyl isomerase H 	ENSMUST00000106317.1|Ppih|ENSMUSG00000060288.7|peptidyl prolyl isomerase H 	ENSMUST00000106318.1|Ppih|ENSMUSG00000060288.7|peptidyl prolyl isomerase H
mm10_v2_chr19_+_6364557_6364668	0.850924	En1	ENSMUST00000155973.1|Sf1|ENSMUSG00000024949.11|splicing factor 1
mm10_v2_chr18_+_27598582_27598644	0.844416	En1	ENSMUST00000050143.3|Gm7729|ENSMUSG00000046636.4|predicted gene 7729
mm10_v2_chr10_+_60002805_60002851	0.841152	En1	ENSMUST00000050516.6|Ascc1|ENSMUSG00000044475.7|activating signal cointegrator 1 complex subunit 1
mm10_v2_chrX_-_75875101_75875182	0.839912	En1	ENSMUST00000114059.3|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr12_+_117516479_117516534	0.838286	En1	ENSMUST00000109691.2|Rapgef5|ENSMUSG00000041992.8|Rap guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr11_-_80779989_80780033	0.83322	En1	ENSMUST00000041065.7|Myo1d|ENSMUSG00000035441.8|myosin ID 	ENSMUST00000070997.5|Myo1d|ENSMUSG00000035441.8|myosin ID
mm10_v2_chr12_+_109540979_109541007	0.827338	En1	ENSMUST00000129245.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3 	ENSMUST00000143836.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3 	ENSMUST00000124106.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr10_+_88091070_88091076	0.826016	En1	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr7_+_125707945_125707991	0.82438	En1	ENSMUST00000148701.1|D430042O09Rik|ENSMUSG00000032743.9|RIKEN cDNA D430042O09 gene
mm10_v2_chr11_-_98625661_98625661	0.817438	En1	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr10_+_5593718_5593739	0.816051	En1	ENSMUST00000051809.8|Myct1|ENSMUSG00000046916.8|myc target 1
mm10_v2_chr9_-_106891401_106891438	0.814845	En1	ENSMUST00000069036.7|Manf|ENSMUSG00000032575.10|mesencephalic astrocyte-derived neurotrophic factor
mm10_v2_chr13_-_49320219_49320311	0.795037	En1	ENSMUST00000110086.1|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr16_+_20548577_20548672	0.791832	En1	ENSMUST00000003319.5|Abcf3|ENSMUSG00000003234.9|ATP-binding cassette, sub-family F (GCN20), member 3
mm10_v2_chr2_+_173021902_173021939	0.791781	En1	ENSMUST00000029014.9|Rbm38|ENSMUSG00000027510.11|RNA binding motif protein 38
mm10_v2_chr11_+_82115180_82115186	0.791448	En1	ENSMUST00000009329.2|Ccl8|ENSMUSG00000009185.2|chemokine (C-C motif) ligand 8
mm10_v2_chr17_-_24886304_24886353	0.783479	En1	ENSMUST00000044252.5|Nubp2|ENSMUSG00000039183.5|nucleotide binding protein 2
mm10_v2_chr15_+_4375462_4375511	0.768809	En1	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr16_+_18348181_18348274	0.768564	En1	ENSMUST00000115614.2|Arvcf|ENSMUSG00000000325.9|armadillo repeat gene deleted in velo-cardio-facial syndrome 	ENSMUST00000115613.1|Arvcf|ENSMUSG00000000325.9|armadillo repeat gene deleted in velo-cardio-facial syndrome 	ENSMUST00000090103.3|Arvcf|ENSMUSG00000000325.9|armadillo repeat gene deleted in velo-cardio-facial syndrome
mm10_v2_chr4_-_139832920_139833007	0.761651	En1	ENSMUST00000174681.1|Pax7|ENSMUSG00000028736.7|paired box gene 7
mm10_v2_chr17_-_58991343_58991375	0.760439	En1	ENSMUST00000025064.7|2610034M16Rik|ENSMUSG00000024227.8|RIKEN cDNA 2610034M16 gene
mm10_v2_chr4_-_56802265_56802331	0.757825	En1	ENSMUST00000030140.2|Ikbkap|ENSMUSG00000028431.5|inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein
mm10_v2_chr9_-_107289847_107289877	0.756045	En1	ENSMUST00000035194.2|Mapkapk3|ENSMUSG00000032577.10|mitogen-activated protein kinase-activated protein kinase 3
mm10_v2_chrX_-_134600976_134601125	0.753037	En1	ENSMUST00000033621.6|Gla|ENSMUSG00000031266.6|galactosidase, alpha
mm10_v2_chrX_+_106015699_106015759	0.746986	En1	ENSMUST00000033582.4|Cox7b|ENSMUSG00000031231.4|cytochrome c oxidase subunit VIIb
mm10_v2_chrX_+_151803642_151803673	0.737801	En1	ENSMUST00000156616.2|Huwe1|ENSMUSG00000025261.11|HECT, UBA and WWE domain containing 1
mm10_v2_chr1_+_109993982_109993982	0.736336	En1	ENSMUST00000027542.6|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr11_-_72411695_72411718	0.735998	En1	ENSMUST00000108500.1|Smtnl2|ENSMUSG00000045667.8|smoothelin-like 2 	ENSMUST00000050226.6|Smtnl2|ENSMUSG00000045667.8|smoothelin-like 2
mm10_v2_chr11_+_80383279_80383304	0.733261	En1	ENSMUST00000165565.1|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207 	ENSMUST00000017567.7|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr11_+_97685794_97685845	0.731607	En1	ENSMUST00000107584.1|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3 	ENSMUST00000107585.2|Cisd3|ENSMUSG00000078695.2|CDGSH iron sulfur domain 3
mm10_v2_chr13_-_21780616_21780632	0.729568	En1	ENSMUST00000080511.2|Hist1h1b|ENSMUSG00000058773.2|histone cluster 1, H1b
mm10_v2_chr7_+_19024387_19024439	0.723781	En1	ENSMUST00000153976.1|Sympk|ENSMUSG00000023118.9|symplekin
mm10_v2_chr4_+_56802337_56802359	0.722641	En1	ENSMUST00000045368.5|BC026590|ENSMUSG00000038827.5|cDNA sequence BC026590
mm10_v2_chr14_+_31251454_31251530	0.712049	En1	ENSMUST00000022458.4|Bap1|ENSMUSG00000021901.4|Brca1 associated protein 1
mm10_v2_chr10_+_13552894_13552894	0.71175	En1	ENSMUST00000019944.8|Adat2|ENSMUSG00000019808.8|adenosine deaminase, tRNA-specific 2
mm10_v2_chr14_-_20618339_20618365	0.710797	En1	ENSMUST00000035340.7|Usp54|ENSMUSG00000034235.10|ubiquitin specific peptidase 54
mm10_v2_chr16_-_96082513_96082573	0.709894	En1	ENSMUST00000113827.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr19_+_7268296_7268313	0.705525	En1	ENSMUST00000066646.4|Rcor2|ENSMUSG00000024968.7|REST corepressor 2
mm10_v2_chr5_+_100518309_100518474	0.705171	En1	ENSMUST00000045993.8|Cops4|ENSMUSG00000035297.8|COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana) 	ENSMUST00000151414.1|Cops4|ENSMUSG00000035297.8|COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana)
mm10_v2_chr11_+_72207537_72207620	0.699709	En1	ENSMUST00000021158.3|Txndc17|ENSMUSG00000020803.3|thioredoxin domain containing 17
mm10_v2_chr7_-_105737376_105737376	0.682643	En1	ENSMUST00000098148.4|Rrp8|ENSMUSG00000030888.7|ribosomal RNA processing 8, methyltransferase, homolog (yeast)
mm10_v2_chr2_-_71367749_71367797	0.682238	En1	ENSMUST00000151937.1|Slc25a12|ENSMUSG00000027010.10|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm10_v2_chr7_+_125707893_125707929	0.671716	En1	ENSMUST00000069660.6|D430042O09Rik|ENSMUSG00000032743.9|RIKEN cDNA D430042O09 gene 	ENSMUST00000142464.1|D430042O09Rik|ENSMUSG00000032743.9|RIKEN cDNA D430042O09 gene
mm10_v2_chr6_+_29859374_29859381	0.664131	En1	ENSMUST00000115238.3|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr4_-_4138432_4138480	0.657881	En1	ENSMUST00000070375.7|Penk|ENSMUSG00000045573.9|preproenkephalin
mm10_v2_chr7_+_127876796_127876919	0.653305	En1	ENSMUST00000131000.1|Zfp646|ENSMUSG00000049739.9|zinc finger protein 646
mm10_v2_chr9_-_106789130_106789213	0.651886	En1	ENSMUST00000046502.5|Rad54l2|ENSMUSG00000040661.5|RAD54 like 2 (S. cerevisiae)
mm10_v2_chr2_+_105675429_105675449	0.648205	En1	ENSMUST00000111085.1|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr5_+_137630116_137630130	0.64779	En1	ENSMUST00000175968.1|Lrch4|ENSMUSG00000093445.1|leucine-rich repeats and calponin homology (CH) domain containing 4
mm10_v2_chr9_+_107935876_107935938	0.641918	En1	ENSMUST00000035700.8|Camkv|ENSMUSG00000032936.8|CaM kinase-like vesicle-associated
mm10_v2_chr7_+_27486910_27486960	0.636267	En1	ENSMUST00000008528.7|Sertad1|ENSMUSG00000008384.8|SERTA domain containing 1
mm10_v2_chr14_-_47276790_47276848	0.633989	En1	ENSMUST00000111792.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1 	ENSMUST00000111791.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1 	ENSMUST00000111790.1|Wdhd1|ENSMUSG00000037572.10|WD repeat and HMG-box DNA binding protein 1
mm10_v2_chr6_-_69400097_69400097	0.630277	En1	ENSMUST00000177795.1|Igkv4-62|ENSMUSG00000094262.1|immunoglobulin kappa variable 4-62
mm10_v2_chr3_-_135691512_135691564	0.628462	En1	ENSMUST00000029812.7|Nfkb1|ENSMUSG00000028163.11|nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
mm10_v2_chr12_+_59013379_59013398	0.627017	En1	ENSMUST00000021379.7|Gemin2|ENSMUSG00000060121.9|gem (nuclear organelle) associated protein 2
mm10_v2_chr1_-_158814469_158814469	0.620728	En1	ENSMUST00000161589.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr3_-_92429403_92429426	0.617608	En1	ENSMUST00000047300.7|Gm9774|ENSMUSG00000042165.7|predicted pseudogene 9774
mm10_v2_chr10_+_79881023_79881042	0.615669	En1	ENSMUST00000166201.1|Prtn3|ENSMUSG00000057729.6|proteinase 3
mm10_v2_chr8_-_41041828_41041866	0.612911	En1	ENSMUST00000051379.7|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr1_-_135313691_135313778	0.612392	En1	ENSMUST00000134088.1|Timm17a|ENSMUSG00000062580.3|translocase of inner mitochondrial membrane 17a 	ENSMUST00000081104.3|Timm17a|ENSMUSG00000062580.3|translocase of inner mitochondrial membrane 17a
mm10_v2_chr11_+_80383309_80383336	0.604464	En1	ENSMUST00000108216.1|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr16_+_33056499_33056527	0.60342	En1	ENSMUST00000115078.1|Rpl35a|ENSMUSG00000060636.7|ribosomal protein L35A
mm10_v2_chr10_+_4432467_4432661	0.602741	En1	ENSMUST00000095893.4|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000118544.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000117489.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene
mm10_v2_chr15_+_102407144_102407269	0.588688	En1	ENSMUST00000169619.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr2_+_31759932_31759989	0.588593	En1	ENSMUST00000028190.6|Abl1|ENSMUSG00000026842.10|c-abl oncogene 1, non-receptor tyrosine kinase
mm10_v2_chr7_-_125707735_125707780	0.587851	En1	ENSMUST00000055506.7|Gtf3c1|ENSMUSG00000032777.8|general transcription factor III C 1
mm10_v2_chr4_-_134187019_134187112	0.58328	En1	ENSMUST00000040271.5|Cep85|ENSMUSG00000037443.7|centrosomal protein 85
mm10_v2_chr2_+_167062934_167062934	0.582723	En1	ENSMUST00000125674.1|1500012F01Rik|ENSMUSG00000074578.6|RIKEN cDNA 1500012F01 gene
mm10_v2_chr6_+_120836201_120836257	0.580139	En1	ENSMUST00000009256.2|Bcl2l13|ENSMUSG00000009112.2|BCL2-like 13 (apoptosis facilitator)
mm10_v2_chr7_+_127511976_127512075	0.577661	En1	ENSMUST00000098025.4|Srcap|ENSMUSG00000053877.6|Snf2-related CREBBP activator protein
mm10_v2_chr5_+_53590215_53590351	0.576657	En1	ENSMUST00000037618.6|Rbpj|ENSMUSG00000039191.6|recombination signal binding protein for immunoglobulin kappa J region
mm10_v2_chr4_+_62525369_62525369	0.572475	En1	ENSMUST00000062145.1|4933430I17Rik|ENSMUSG00000058046.1|RIKEN cDNA 4933430I17 gene
mm10_v2_chrX_+_56963325_56963325	0.572297	En1	ENSMUST00000096431.3|Gpr112|ENSMUSG00000053852.5|G protein-coupled receptor 112
mm10_v2_chrX_-_75874536_75874590	0.560161	En1	ENSMUST00000033547.7|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr17_-_23771543_23771595	0.558221	En1	ENSMUST00000086325.5|Flywch1|ENSMUSG00000040097.9|FLYWCH-type zinc finger 1
mm10_v2_chr19_-_8798495_8798565	0.557934	En1	ENSMUST00000096261.3|Polr2g|ENSMUSG00000071662.3|polymerase (RNA) II (DNA directed) polypeptide G
mm10_v2_chr11_+_5009515_5009530	0.55731	En1	ENSMUST00000101613.2|Ap1b1|ENSMUSG00000009090.11|adaptor protein complex AP-1, beta 1 subunit
mm10_v2_chr1_+_151571373_151571471	0.555163	En1	ENSMUST00000148810.1|Fam129a|ENSMUSG00000026483.7|family with sequence similarity 129, member A
mm10_v2_chr16_+_33057012_33057038	0.552887	En1	ENSMUST00000115075.1|Rpl35a|ENSMUSG00000060636.7|ribosomal protein L35A
mm10_v2_chr17_+_47649621_47649621	0.549349	En1	ENSMUST00000145314.1|Usp49|ENSMUSG00000090115.1|ubiquitin specific peptidase 49
mm10_v2_chr4_+_131843459_131843503	0.548572	En1	ENSMUST00000030742.4|Mecr|ENSMUSG00000028910.6|mitochondrial trans-2-enoyl-CoA reductase 	ENSMUST00000137321.1|Mecr|ENSMUSG00000028910.6|mitochondrial trans-2-enoyl-CoA reductase
mm10_v2_chr11_-_83649349_83649365	0.548299	En1	ENSMUST00000001008.5|Ccl3|ENSMUSG00000000982.5|chemokine (C-C motif) ligand 3
mm10_v2_chr3_-_78892451_78892451	0.541009	En1	ENSMUST00000164923.1|Gm5277|ENSMUSG00000091361.1|predicted gene 5277
mm10_v2_chr19_-_47015113_47015206	0.537185	En1	ENSMUST00000172239.2|Nt5c2|ENSMUSG00000025041.10|5'-nucleotidase, cytosolic II
mm10_v2_chr5_+_142629537_142629593	0.534713	En1	ENSMUST00000036872.9|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2 	ENSMUST00000110778.1|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2
mm10_v2_chr2_-_155357392_155357431	0.532604	En1	ENSMUST00000165234.1|Pigu|ENSMUSG00000038383.10|phosphatidylinositol glycan anchor biosynthesis, class U 	ENSMUST00000077626.6|Pigu|ENSMUSG00000038383.10|phosphatidylinositol glycan anchor biosynthesis, class U
mm10_v2_chr10_+_94198955_94199043	0.532496	En1	ENSMUST00000020209.9|Ndufa12|ENSMUSG00000020022.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 	ENSMUST00000179990.1|Ndufa12|ENSMUSG00000020022.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
mm10_v2_chr13_+_67833235_67833235	0.531998	En1	ENSMUST00000060609.7|Gm10037|ENSMUSG00000058246.6|predicted gene 10037
mm10_v2_chr13_+_40859768_40859822	0.531587	En1	ENSMUST00000110191.2|Gcnt2|ENSMUSG00000021360.9|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm10_v2_chr4_+_126677630_126677646	0.530394	En1	ENSMUST00000030642.2|Psmb2|ENSMUSG00000028837.2|proteasome (prosome, macropain) subunit, beta type 2
mm10_v2_chr13_+_102693522_102693586	0.529903	En1	ENSMUST00000022124.3|Cd180|ENSMUSG00000021624.3|CD180 antigen 	ENSMUST00000171267.1|Cd180|ENSMUSG00000021624.3|CD180 antigen 	ENSMUST00000167144.1|Cd180|ENSMUSG00000021624.3|CD180 antigen 	ENSMUST00000170878.1|Cd180|ENSMUSG00000021624.3|CD180 antigen
mm10_v2_chr11_+_57645417_57645489	0.520318	En1	ENSMUST00000066987.7|Galnt10|ENSMUSG00000020520.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 	ENSMUST00000108846.1|Galnt10|ENSMUSG00000020520.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10
mm10_v2_chr9_+_46998931_46998931	0.515217	En1	ENSMUST00000178065.1|Gm4791|ENSMUSG00000094893.1|predicted gene 4791
mm10_v2_chr4_+_154011731_154011818	0.515145	En1	ENSMUST00000169622.1|Lrrc47|ENSMUSG00000029028.8|leucine rich repeat containing 47 	ENSMUST00000030894.8|Lrrc47|ENSMUSG00000029028.8|leucine rich repeat containing 47
mm10_v2_chr9_+_54951104_54951126	0.514611	En1	ENSMUST00000171900.1|Psma4|ENSMUSG00000032301.7|proteasome (prosome, macropain) subunit, alpha type 4
mm10_v2_chr4_+_124714776_124714879	0.509896	En1	ENSMUST00000030734.4|Sf3a3|ENSMUSG00000028902.4|splicing factor 3a, subunit 3
mm10_v2_chr2_+_129800451_129800526	0.508273	En1	ENSMUST00000165413.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35 	ENSMUST00000166282.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35
mm10_v2_chr10_+_43221505_43221600	0.503837	En1	ENSMUST00000159139.1|Pdss2|ENSMUSG00000038240.7|prenyl (solanesyl) diphosphate synthase, subunit 2
mm10_v2_chr9_+_78615501_78615546	0.498219	En1	ENSMUST00000093812.4|Cd109|ENSMUSG00000046186.8|CD109 antigen
mm10_v2_chr16_+_33056453_33056495	0.497495	En1	ENSMUST00000078804.5|Rpl35a|ENSMUSG00000060636.7|ribosomal protein L35A 	ENSMUST00000115079.1|Rpl35a|ENSMUSG00000060636.7|ribosomal protein L35A
mm10_v2_chr10_+_118141787_118141870	0.495859	En1	ENSMUST00000163238.1|Mdm1|ENSMUSG00000020212.7|transformed mouse 3T3 cell double minute 1 	ENSMUST00000020437.5|Mdm1|ENSMUSG00000020212.7|transformed mouse 3T3 cell double minute 1 	ENSMUST00000164077.1|Mdm1|ENSMUSG00000020212.7|transformed mouse 3T3 cell double minute 1 	ENSMUST00000169817.1|Mdm1|ENSMUSG00000020212.7|transformed mouse 3T3 cell double minute 1
mm10_v2_chr14_-_63543931_63543991	0.494452	En1	ENSMUST00000058679.5|Mtmr9|ENSMUSG00000035078.5|myotubularin related protein 9
mm10_v2_chr9_+_54950782_54950797	0.493901	En1	ENSMUST00000034848.7|Psma4|ENSMUSG00000032301.7|proteasome (prosome, macropain) subunit, alpha type 4
mm10_v2_chr6_+_142413441_142413441	0.491821	En1	ENSMUST00000088263.4|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr9_+_54950808_54950820	0.488293	En1	ENSMUST00000172407.1|Psma4|ENSMUSG00000032301.7|proteasome (prosome, macropain) subunit, alpha type 4
mm10_v2_chr10_-_75921562_75921625	0.487319	En1	ENSMUST00000121304.1|Smarcb1|ENSMUSG00000000902.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 	ENSMUST00000000925.3|Smarcb1|ENSMUSG00000000902.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
mm10_v2_chr4_-_138913915_138913983	0.485962	En1	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr6_-_69631933_69631933	0.4859	En1	ENSMUST00000177697.1|Igkv4-54|ENSMUSG00000094319.1|immunoglobulin kappa chain variable 4-54
mm10_v2_chr11_+_62551676_62551735	0.483711	En1	ENSMUST00000136938.1|Ubb|ENSMUSG00000019505.7|ubiquitin B
mm10_v2_chr18_+_32240300_32240342	0.480005	En1	ENSMUST00000025241.6|Ercc3|ENSMUSG00000024382.7|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm10_v2_chr10_+_128706251_128706264	0.473479	En1	ENSMUST00000054125.8|Pmel|ENSMUSG00000025359.9|premelanosome protein
mm10_v2_chr6_-_113377376_113377396	0.472227	En1	ENSMUST00000043333.2|Tada3|ENSMUSG00000048930.6|transcriptional adaptor 3
mm10_v2_chr8_+_82863351_82863397	0.470617	En1	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chrM_+_9452_9468	0.470592	En1	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm10_v2_chr1_-_13660476_13660554	0.468428	En1	ENSMUST00000027071.5|Lactb2|ENSMUSG00000025937.5|lactamase, beta 2
mm10_v2_chr7_+_75455534_75455629	0.466197	En1	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chrX_+_134601179_134601266	0.459533	En1	ENSMUST00000074950.4|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2 	ENSMUST00000113203.1|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2 	ENSMUST00000113202.1|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2
mm10_v2_chr9_-_56928350_56928392	0.458089	En1	ENSMUST00000050916.5|Snx33|ENSMUSG00000032733.5|sorting nexin 33
mm10_v2_chr18_+_36793918_36793937	0.451262	En1	ENSMUST00000001419.8|Zmat2|ENSMUSG00000001383.8|zinc finger, matrin type 2
mm10_v2_chr2_-_92460449_92460538	0.45043	En1	ENSMUST00000125276.1|Slc35c1|ENSMUSG00000049922.8|solute carrier family 35, member C1
mm10_v2_chr11_-_45955183_45955193	0.450067	En1	ENSMUST00000109254.1|Thg1l|ENSMUSG00000011254.10|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm10_v2_chr1_+_87327044_87327066	0.448021	En1	ENSMUST00000173173.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr2_+_91054009_91054038	0.447947	En1	ENSMUST00000067663.7|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm10_v2_chr6_+_82402475_82402475	0.44439	En1	ENSMUST00000032122.8|Tacr1|ENSMUSG00000030043.9|tachykinin receptor 1
mm10_v2_chr15_-_76209056_76209165	0.44108	En1	ENSMUST00000071869.5|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000170915.1|Plec|ENSMUSG00000022565.9|plectin
mm10_v2_chr9_-_59750616_59750649	0.438572	En1	ENSMUST00000163586.1|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8 	ENSMUST00000177963.1|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8 	ENSMUST00000051039.4|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8
mm10_v2_chr5_+_124598749_124598798	0.433756	En1	ENSMUST00000130912.1|Tctn2|ENSMUSG00000029386.9|tectonic family member 2 	ENSMUST00000100706.3|Tctn2|ENSMUSG00000029386.9|tectonic family member 2
mm10_v2_chr17_+_35841491_35841515	0.426715	En1	ENSMUST00000082337.6|Mdc1|ENSMUSG00000061607.8|mediator of DNA damage checkpoint 1
mm10_v2_chr9_+_44326804_44326896	0.425457	En1	ENSMUST00000054708.3|Dpagt1|ENSMUSG00000032123.4|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm10_v2_chr2_+_174415804_174415871	0.42348	En1	ENSMUST00000109075.1|Nelfcd|ENSMUSG00000016253.6|negative elongation factor complex member C/D, Th1l 	ENSMUST00000016397.6|Nelfcd|ENSMUSG00000016253.6|negative elongation factor complex member C/D, Th1l
mm10_v2_chr10_+_85313488_85313488	0.42166	En1	ENSMUST00000079684.6|Gm8394|ENSMUSG00000050490.7|predicted gene 8394
mm10_v2_chr1_+_191575721_191575792	0.421571	En1	ENSMUST00000045450.5|Ints7|ENSMUSG00000037461.5|integrator complex subunit 7
mm10_v2_chr1_-_147281942_147281942	0.41654	En1	ENSMUST00000066758.2|Gm9931|ENSMUSG00000053988.2|predicted gene 9931
mm10_v2_chr19_-_5683343_5683343	0.414908	En1	ENSMUST00000127876.1|Pcnxl3|ENSMUSG00000054874.6|pecanex-like 3 (Drosophila)
mm10_v2_chr3_-_87885558_87885608	0.413016	En1	ENSMUST00000005015.8|Prcc|ENSMUSG00000004895.8|papillary renal cell carcinoma (translocation-associated)
mm10_v2_chr7_+_12922290_12922437	0.411616	En1	ENSMUST00000108539.1|Rps5|ENSMUSG00000012848.8|ribosomal protein S5 	ENSMUST00000004554.7|Rps5|ENSMUSG00000012848.8|ribosomal protein S5 	ENSMUST00000147435.1|Rps5|ENSMUSG00000012848.8|ribosomal protein S5 	ENSMUST00000137329.1|Rps5|ENSMUSG00000012848.8|ribosomal protein S5
mm10_v2_chr8_+_46492789_46492832	0.410372	En1	ENSMUST00000110371.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr10_+_43221466_43221501	0.407013	En1	ENSMUST00000095725.4|Pdss2|ENSMUSG00000038240.7|prenyl (solanesyl) diphosphate synthase, subunit 2
mm10_v2_chr9_+_8221889_8221889	0.405954	En1	ENSMUST00000034483.4|1700128F08Rik|ENSMUSG00000031998.4|RIKEN cDNA 1700128F08 gene
mm10_v2_chr9_-_103202113_103202137	0.404892	En1	ENSMUST00000035157.8|Srprb|ENSMUSG00000032553.8|signal recognition particle receptor, B subunit
mm10_v2_chr2_+_91054054_91054114	0.404371	En1	ENSMUST00000002171.7|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3 	ENSMUST00000111441.3|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm10_v2_chr6_-_128424883_128424935	0.400263	En1	ENSMUST00000001559.8|Itfg2|ENSMUSG00000001518.10|integrin alpha FG-GAP repeat containing 2
mm10_v2_chr16_-_31081363_31081439	0.400129	En1	ENSMUST00000055389.7|Xxylt1|ENSMUSG00000047434.7|xyloside xylosyltransferase 1
mm10_v2_chr13_+_24943144_24943164	0.399181	En1	ENSMUST00000021773.5|Gpld1|ENSMUSG00000021340.6|glycosylphosphatidylinositol specific phospholipase D1
mm10_v2_chr11_-_84513485_84513553	0.395532	En1	ENSMUST00000018841.2|Aatf|ENSMUSG00000018697.8|apoptosis antagonizing transcription factor
mm10_v2_chr5_+_31494736_31494778	0.392155	En1	ENSMUST00000076949.6|Gpn1|ENSMUSG00000064037.7|GPN-loop GTPase 1 	ENSMUST00000117700.1|Gpn1|ENSMUSG00000064037.7|GPN-loop GTPase 1
mm10_v2_chr2_+_79707780_79707927	0.391951	En1	ENSMUST00000090760.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000040863.4|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000111780.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm10_v2_chr15_-_33405976_33405976	0.390405	En1	ENSMUST00000079057.6|1700084J12Rik|ENSMUSG00000058101.2|RIKEN cDNA 1700084J12 gene
mm10_v2_chr3_-_145649970_145649992	0.389236	En1	ENSMUST00000029846.3|Cyr61|ENSMUSG00000028195.3|cysteine rich protein 61
mm10_v2_chr18_-_37954958_37955002	0.388617	En1	ENSMUST00000043498.7|Hdac3|ENSMUSG00000024454.9|histone deacetylase 3
mm10_v2_chr16_-_13903051_13903069	0.385633	En1	ENSMUST00000115803.1|Pdxdc1|ENSMUSG00000022680.7|pyridoxal-dependent decarboxylase domain containing 1
mm10_v2_chrX_+_56374550_56374617	0.383236	En1	ENSMUST00000068106.3|6330419J24Rik|ENSMUSG00000054850.3|RIKEN cDNA 6330419J24 gene
mm10_v2_chr14_-_62761112_62761145	0.382497	En1	ENSMUST00000053959.6|Ints6|ENSMUSG00000035161.6|integrator complex subunit 6
mm10_v2_chr2_+_29869484_29869544	0.37997	En1	ENSMUST00000047521.6|Cercam|ENSMUSG00000039787.7|cerebral endothelial cell adhesion molecule 	ENSMUST00000134152.1|Cercam|ENSMUSG00000039787.7|cerebral endothelial cell adhesion molecule
mm10_v2_chr11_-_17008647_17008702	0.373978	En1	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr3_+_95622236_95622278	0.370177	En1	ENSMUST00000074353.4|Rps10-ps1|ENSMUSG00000060438.4|ribosomal protein S10, pseudogene 1
mm10_v2_chr1_-_162898665_162898728	0.36794	En1	ENSMUST00000111510.1|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2 	ENSMUST00000045902.6|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2
mm10_v2_chr7_-_48881596_48881619	0.367747	En1	ENSMUST00000119223.1|E2f8|ENSMUSG00000046179.11|E2F transcription factor 8
mm10_v2_chr3_-_96905294_96905346	0.367406	En1	ENSMUST00000029738.7|Gpr89|ENSMUSG00000028096.7|G protein-coupled receptor 89
mm10_v2_chr16_-_13903015_13903035	0.365696	En1	ENSMUST00000115804.2|Pdxdc1|ENSMUSG00000022680.7|pyridoxal-dependent decarboxylase domain containing 1
mm10_v2_chr2_+_72476225_72476259	0.362895	En1	ENSMUST00000157019.1|Cdca7|ENSMUSG00000055612.9|cell division cycle associated 7
mm10_v2_chr16_+_90220742_90220771	0.361475	En1	ENSMUST00000023707.9|Sod1|ENSMUSG00000022982.9|superoxide dismutase 1, soluble
mm10_v2_chr4_-_44066960_44067061	0.359554	En1	ENSMUST00000173234.1|Gne|ENSMUSG00000028479.12|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 	ENSMUST00000173274.1|Gne|ENSMUSG00000028479.12|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
mm10_v2_chr4_-_45108038_45108128	0.35778	En1	ENSMUST00000107809.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107808.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107807.1|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107810.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast)
mm10_v2_chr7_+_101321703_101321971	0.35698	En1	ENSMUST00000174291.1|Stard10|ENSMUSG00000030688.8|START domain containing 10 	ENSMUST00000167888.2|Stard10|ENSMUSG00000030688.8|START domain containing 10 	ENSMUST00000172662.1|Stard10|ENSMUSG00000030688.8|START domain containing 10 	ENSMUST00000173270.1|Stard10|ENSMUSG00000030688.8|START domain containing 10 	ENSMUST00000174083.1|Stard10|ENSMUSG00000030688.8|START domain containing 10
mm10_v2_chr3_+_152395444_152395489	0.354665	En1	ENSMUST00000106103.1|Zzz3|ENSMUSG00000039068.10|zinc finger, ZZ domain containing 3
mm10_v2_chr6_-_113377510_113377548	0.353513	En1	ENSMUST00000099118.2|Tada3|ENSMUSG00000048930.6|transcriptional adaptor 3
mm10_v2_chrX_-_57392962_57392988	0.350734	En1	ENSMUST00000114730.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr9_-_111057235_111057270	0.349748	En1	ENSMUST00000111888.1|Ccrl2|ENSMUSG00000043953.8|chemokine (C-C motif) receptor-like 2
mm10_v2_chr16_+_32099904_32099973	0.349289	En1	ENSMUST00000042869.6|Cep19|ENSMUSG00000035790.9|centrosomal protein 19
mm10_v2_chrX_+_134601271_134601286	0.348287	En1	ENSMUST00000050331.6|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2 	ENSMUST00000059297.5|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2
mm10_v2_chr2_+_155940728_155940728	0.345079	En1	ENSMUST00000109629.1|Gm15557|ENSMUSG00000078972.1|predicted gene 15557
mm10_v2_chr10_-_40257648_40257687	0.343818	En1	ENSMUST00000019982.7|Gtf3c6|ENSMUSG00000019837.7|general transcription factor IIIC, polypeptide 6, alpha
mm10_v2_chr9_+_122888471_122888471	0.343156	En1	ENSMUST00000063980.6|Zkscan7|ENSMUSG00000063488.5|zinc finger with KRAB and SCAN domains 7
mm10_v2_chr10_+_127514939_127514979	0.341712	En1	ENSMUST00000035735.9|Ndufa4l2|ENSMUSG00000040280.9|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
mm10_v2_chr8_+_124231359_124231450	0.338575	En1	ENSMUST00000034458.8|Galnt2|ENSMUSG00000089704.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm10_v2_chr10_+_3872667_3872788	0.336114	En1	ENSMUST00000136671.1|Plekhg1|ENSMUSG00000040624.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 1 	ENSMUST00000042438.6|Plekhg1|ENSMUSG00000040624.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm10_v2_chr7_+_30321740_30321774	0.334413	En1	ENSMUST00000098585.3|E130208F15Rik|ENSMUSG00000074210.3|RIKEN cDNA E130208F15 gene
mm10_v2_chr4_-_36951223_36951223	0.333633	En1	ENSMUST00000108122.1|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr3_-_132950043_132950291	0.33288	En1	ENSMUST00000117164.1|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000093971.4|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000042729.9|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000042744.9|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000117811.1|Npnt|ENSMUSG00000040998.12|nephronectin
mm10_v2_chr2_+_120567687_120567738	0.332024	En1	ENSMUST00000028743.3|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23 	ENSMUST00000116437.1|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23 	ENSMUST00000153580.1|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23 	ENSMUST00000142278.1|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23
mm10_v2_chr16_+_57121705_57121761	0.328129	En1	ENSMUST00000166897.1|Tomm70a|ENSMUSG00000022752.8|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm10_v2_chr1_-_191575534_191575549	0.325678	En1	ENSMUST00000027933.5|Dtl|ENSMUSG00000037474.8|denticleless homolog (Drosophila)
mm10_v2_chr3_+_90341654_90341654	0.325609	En1	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr5_-_92083455_92083557	0.323984	En1	ENSMUST00000169094.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2 	ENSMUST00000167918.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2
mm10_v2_chr1_-_86670565_86670579	0.317738	En1	ENSMUST00000027449.4|Nppc|ENSMUSG00000026241.4|natriuretic peptide type C
mm10_v2_chr2_-_129371131_129371146	0.31253	En1	ENSMUST00000028881.7|Il1b|ENSMUSG00000027398.7|interleukin 1 beta
mm10_v2_chrX_-_57393020_57393040	0.312269	En1	ENSMUST00000143310.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000098470.2|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000114726.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chr8_-_4217459_4217503	0.308725	En1	ENSMUST00000176227.1|BC068157|ENSMUSG00000064125.8|cDNA sequence BC068157
mm10_v2_chr19_-_10577362_10577407	0.308448	En1	ENSMUST00000025568.2|Tmem138|ENSMUSG00000024666.5|transmembrane protein 138
mm10_v2_chr9_+_120933400_120933578	0.30635	En1	ENSMUST00000007130.8|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1 	ENSMUST00000178812.1|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1
mm10_v2_chr7_-_120670256_120670343	0.304195	En1	ENSMUST00000033178.2|Pdzd9|ENSMUSG00000030887.3|PDZ domain containing 9
mm10_v2_chr3_+_108653907_108653928	0.301518	En1	ENSMUST00000106609.1|Clcc1|ENSMUSG00000027884.10|chloride channel CLIC-like 1
mm10_v2_chr1_-_40085823_40085862	0.300896	En1	ENSMUST00000181756.1|Gm16894|ENSMUSG00000097899.1|predicted gene, 16894
mm10_v2_chr11_-_72207413_72207488	0.298651	En1	ENSMUST00000108505.1|4933427D14Rik|ENSMUSG00000020807.8|RIKEN cDNA 4933427D14 gene
mm10_v2_chr10_-_127311740_127311786	0.298588	En1	ENSMUST00000037290.5|Mars|ENSMUSG00000040354.8|methionine-tRNA synthetase 	ENSMUST00000171564.1|Mars|ENSMUSG00000040354.8|methionine-tRNA synthetase
mm10_v2_chr4_-_99829180_99829191	0.294605	En1	ENSMUST00000146258.1|Itgb3bp|ENSMUSG00000028549.11|integrin beta 3 binding protein (beta3-endonexin)
mm10_v2_chr12_-_45074112_45074306	0.293556	En1	ENSMUST00000120531.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn) 	ENSMUST00000143376.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn)
mm10_v2_chr3_-_51277470_51277514	0.292734	En1	ENSMUST00000108053.2|Elf2|ENSMUSG00000037174.12|E74-like factor 2 	ENSMUST00000108051.1|Elf2|ENSMUSG00000037174.12|E74-like factor 2
mm10_v2_chr5_-_88527841_88527891	0.291487	En1	ENSMUST00000087033.3|Igj|ENSMUSG00000067149.3|immunoglobulin joining chain
mm10_v2_chr4_-_154025616_154025634	0.289095	En1	ENSMUST00000182191.1|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1 	ENSMUST00000146543.2|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1
mm10_v2_chr3_-_120886691_120886746	0.285935	En1	ENSMUST00000182099.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene 	ENSMUST00000183168.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene 	ENSMUST00000183276.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene 	ENSMUST00000182124.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene
mm10_v2_chr9_+_65587149_65587185	0.281046	En1	ENSMUST00000134538.1|Pif1|ENSMUSG00000041064.7|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) 	ENSMUST00000136205.1|Pif1|ENSMUSG00000041064.7|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
mm10_v2_chr11_-_69369377_69369415	0.279435	En1	ENSMUST00000092971.6|Chd3|ENSMUSG00000018474.11|chromodomain helicase DNA binding protein 3 	ENSMUST00000108661.1|Chd3|ENSMUSG00000018474.11|chromodomain helicase DNA binding protein 3
mm10_v2_chr4_-_123718181_123718195	0.274164	En1	ENSMUST00000137312.1|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5 	ENSMUST00000106206.1|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5
mm10_v2_chr9_+_72438534_72438578	0.271762	En1	ENSMUST00000034746.8|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr7_-_127876777_127876854	0.271444	En1	ENSMUST00000106262.1|Zfp668|ENSMUSG00000049728.8|zinc finger protein 668 	ENSMUST00000106263.1|Zfp668|ENSMUSG00000049728.8|zinc finger protein 668 	ENSMUST00000054415.5|Zfp668|ENSMUSG00000049728.8|zinc finger protein 668
mm10_v2_chr14_+_55824795_55824889	0.26957	En1	ENSMUST00000024179.5|Nfatc4|ENSMUSG00000023411.5|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 	ENSMUST00000172271.1|Nfatc4|ENSMUSG00000023411.5|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4
mm10_v2_chr19_+_6400611_6400623	0.267343	En1	ENSMUST00000113467.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr19_+_36834215_36834297	0.267258	En1	ENSMUST00000025729.5|Tnks2|ENSMUSG00000024811.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm10_v2_chr19_+_5490475_5490487	0.266393	En1	ENSMUST00000116560.2|Cfl1|ENSMUSG00000056201.6|cofilin 1, non-muscle
mm10_v2_chr13_-_8858762_8858829	0.258013	En1	ENSMUST00000176329.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr16_-_13903085_13903149	0.256918	En1	ENSMUST00000023361.5|Pdxdc1|ENSMUSG00000022680.7|pyridoxal-dependent decarboxylase domain containing 1 	ENSMUST00000115802.1|Pdxdc1|ENSMUSG00000022680.7|pyridoxal-dependent decarboxylase domain containing 1
mm10_v2_chr4_-_49521036_49521093	0.256094	En1	ENSMUST00000057829.3|Mrpl50|ENSMUSG00000044018.3|mitochondrial ribosomal protein L50
mm10_v2_chr6_+_55203381_55203459	0.255102	En1	ENSMUST00000053094.7|Fam188b|ENSMUSG00000038022.9|family with sequence similarity 188, member B
mm10_v2_chr11_-_103344651_103344719	0.251356	En1	ENSMUST00000041385.7|Arhgap27|ENSMUSG00000034255.11|Rho GTPase activating protein 27
mm10_v2_chr2_-_130397525_130397587	0.249615	En1	ENSMUST00000028897.7|Cpxm1|ENSMUSG00000027408.7|carboxypeptidase X 1 (M14 family)
mm10_v2_chr1_+_164048214_164048234	0.249253	En1	ENSMUST00000027874.5|Sele|ENSMUSG00000026582.6|selectin, endothelial cell
mm10_v2_chr2_+_32606979_32607057	0.248318	En1	ENSMUST00000113289.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 	ENSMUST00000095044.3|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr4_+_43632185_43632185	0.246575	En1	ENSMUST00000107874.2|Npr2|ENSMUSG00000028469.9|natriuretic peptide receptor 2
mm10_v2_chr16_+_11405648_11405713	0.246545	En1	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr9_-_58201705_58201799	0.243087	En1	ENSMUST00000163200.1|Islr2|ENSMUSG00000051243.7|immunoglobulin superfamily containing leucine-rich repeat 2 	ENSMUST00000165276.1|Islr2|ENSMUSG00000051243.7|immunoglobulin superfamily containing leucine-rich repeat 2
mm10_v2_chr4_+_86575668_86575689	0.239637	En1	ENSMUST00000091064.6|Rraga|ENSMUSG00000070934.5|Ras-related GTP binding A
mm10_v2_chr19_-_8713862_8713897	0.237436	En1	ENSMUST00000010239.4|Slc3a2|ENSMUSG00000010095.7|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm10_v2_chr17_-_75551838_75551946	0.234461	En1	ENSMUST00000112507.3|Fam98a|ENSMUSG00000002017.9|family with sequence similarity 98, member A
mm10_v2_chr2_+_121357714_121357907	0.229716	En1	ENSMUST00000125812.1|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous 	ENSMUST00000078222.2|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous 	ENSMUST00000125221.1|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous 	ENSMUST00000150271.1|Ckmt1|ENSMUSG00000000308.8|creatine kinase, mitochondrial 1, ubiquitous
mm10_v2_chr3_+_89245952_89245978	0.225917	En1	ENSMUST00000040888.5|Krtcap2|ENSMUSG00000042747.6|keratinocyte associated protein 2
mm10_v2_chr4_-_42168603_42168603	0.223685	En1	ENSMUST00000098121.3|Gm13305|ENSMUSG00000073876.3|predicted gene 13305
mm10_v2_chrX_+_73716712_73716750	0.222544	En1	ENSMUST00000114461.2|Abcd1|ENSMUSG00000031378.8|ATP-binding cassette, sub-family D (ALD), member 1
mm10_v2_chr2_+_32606946_32606973	0.221365	En1	ENSMUST00000113290.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr7_-_25237849_25237856	0.220078	En1	ENSMUST00000071739.5|Gsk3a|ENSMUSG00000057177.6|glycogen synthase kinase 3 alpha 	ENSMUST00000108411.1|Gsk3a|ENSMUSG00000057177.6|glycogen synthase kinase 3 alpha
mm10_v2_chr8_+_75016222_75016246	0.2183	En1	ENSMUST00000109940.1|Hmgxb4|ENSMUSG00000034518.7|HMG box domain containing 4
mm10_v2_chr2_-_101628930_101628954	0.217406	En1	ENSMUST00000099682.2|B230118H07Rik|ENSMUSG00000027165.10|RIKEN cDNA B230118H07 gene
mm10_v2_chr19_+_18670780_18670810	0.214479	En1	ENSMUST00000025632.9|2410127L17Rik|ENSMUSG00000024726.9|RIKEN cDNA 2410127L17 gene
mm10_v2_chr7_+_19361207_19361262	0.212024	En1	ENSMUST00000047621.7|Ppp1r13l|ENSMUSG00000040734.8|protein phosphatase 1, regulatory (inhibitor) subunit 13 like
mm10_v2_chr9_+_56994932_56994986	0.209128	En1	ENSMUST00000034832.6|Ptpn9|ENSMUSG00000032290.6|protein tyrosine phosphatase, non-receptor type 9
mm10_v2_chr5_-_75978447_75978463	0.208548	En1	ENSMUST00000113516.1|Kdr|ENSMUSG00000062960.7|kinase insert domain protein receptor
mm10_v2_chr3_+_108653931_108653964	0.20419	En1	ENSMUST00000029483.8|Clcc1|ENSMUSG00000027884.10|chloride channel CLIC-like 1 	ENSMUST00000124384.1|Clcc1|ENSMUSG00000027884.10|chloride channel CLIC-like 1
mm10_v2_chr5_-_77310049_77310094	0.203878	En1	ENSMUST00000047860.8|Noa1|ENSMUSG00000036285.10|nitric oxide associated 1
mm10_v2_chr2_-_91183818_91183899	0.200573	En1	ENSMUST00000075269.3|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000111371.1|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000111372.1|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000111381.2|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000077941.6|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000066473.5|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain
mm10_v2_chr4_-_123718198_123718209	0.197851	En1	ENSMUST00000030401.7|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5
mm10_v2_chr1_-_54194048_54194048	0.197626	En1	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr6_-_87809757_87809787	0.19548	En1	ENSMUST00000032134.7|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family
mm10_v2_chr6_+_70726430_70726472	0.18922	En1	ENSMUST00000103410.1|Igkc|ENSMUSG00000076609.1|immunoglobulin kappa constant
mm10_v2_chr9_-_64341288_64341311	0.188797	En1	ENSMUST00000068367.7|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like
mm10_v2_chr3_+_96635840_96635868	0.18643	En1	ENSMUST00000165842.1|Pex11b|ENSMUSG00000028102.9|peroxisomal biogenesis factor 11 beta
mm10_v2_chr12_-_91779129_91779144	0.178108	En1	ENSMUST00000170077.1|Ston2|ENSMUSG00000020961.8|stonin 2
mm10_v2_chrX_+_162901567_162901677	0.176514	En1	ENSMUST00000112303.1|Ctps2|ENSMUSG00000031360.8|cytidine 5'-triphosphate synthase 2 	ENSMUST00000033727.7|Ctps2|ENSMUSG00000031360.8|cytidine 5'-triphosphate synthase 2
mm10_v2_chr6_+_48613180_48613180	0.172461	En1	ENSMUST00000061720.4|Zfp775|ENSMUSG00000007216.4|zinc finger protein 775
mm10_v2_chr17_+_47688992_47689030	0.171143	En1	ENSMUST00000156118.1|Frs3|ENSMUSG00000023266.5|fibroblast growth factor receptor substrate 3
mm10_v2_chr6_-_97487801_97487879	0.169443	En1	ENSMUST00000113353.1|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B 	ENSMUST00000032146.7|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B
mm10_v2_chr19_+_8871512_8871559	0.169161	En1	ENSMUST00000166407.1|Ubxn1|ENSMUSG00000071655.5|UBX domain protein 1
mm10_v2_chr1_+_171411305_171411337	0.16863	En1	ENSMUST00000161241.1|Usf1|ENSMUSG00000026641.7|upstream transcription factor 1 	ENSMUST00000159207.1|Usf1|ENSMUSG00000026641.7|upstream transcription factor 1
mm10_v2_chr6_+_123229843_123229863	0.168387	En1	ENSMUST00000112554.2|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000024118.4|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000117130.1|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n
mm10_v2_chr11_+_115933282_115933282	0.168081	En1	ENSMUST00000140991.1|Sap30bp|ENSMUSG00000020755.3|SAP30 binding protein
mm10_v2_chr11_+_87109221_87109239	0.166042	En1	ENSMUST00000020794.5|Ska2|ENSMUSG00000020492.5|spindle and kinetochore associated complex subunit 2
mm10_v2_chr7_+_28392916_28393013	0.162946	En1	ENSMUST00000003529.8|Paf1|ENSMUSG00000003437.8|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
mm10_v2_chr11_+_75348433_75348560	0.158122	En1	ENSMUST00000044530.2|Smyd4|ENSMUSG00000018809.2|SET and MYND domain containing 4
mm10_v2_chr7_+_132859225_132859266	0.155717	En1	ENSMUST00000084497.5|Fam175b|ENSMUSG00000030965.12|family with sequence similarity 175, member B 	ENSMUST00000181577.1|Fam175b|ENSMUSG00000030965.12|family with sequence similarity 175, member B 	ENSMUST00000106161.1|Fam175b|ENSMUSG00000030965.12|family with sequence similarity 175, member B
mm10_v2_chr1_+_87327008_87327042	0.151344	En1	ENSMUST00000172794.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2 	ENSMUST00000164992.2|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr11_+_93098404_93098437	0.151225	En1	ENSMUST00000107859.1|Car10|ENSMUSG00000056158.8|carbonic anhydrase 10 	ENSMUST00000042943.6|Car10|ENSMUSG00000056158.8|carbonic anhydrase 10 	ENSMUST00000107861.1|Car10|ENSMUSG00000056158.8|carbonic anhydrase 10 	ENSMUST00000107858.2|Car10|ENSMUSG00000056158.8|carbonic anhydrase 10
mm10_v2_chr3_+_40950631_40950657	0.147755	En1	ENSMUST00000048490.6|Larp1b|ENSMUSG00000037814.9|La ribonucleoprotein domain family, member 1B
mm10_v2_chr2_-_167062607_167062724	0.147346	En1	ENSMUST00000128676.1|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr17_+_70929006_70929058	0.145376	En1	ENSMUST00000092011.6|Gm16519|ENSMUSG00000066983.6|predicted gene, 16519
mm10_v2_chr3_-_107333289_107333289	0.143571	En1	ENSMUST00000061772.9|Rbm15|ENSMUSG00000048109.9|RNA binding motif protein 15
mm10_v2_chr9_+_65587187_65587226	0.140169	En1	ENSMUST00000047099.5|Pif1|ENSMUSG00000041064.7|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) 	ENSMUST00000131483.1|Pif1|ENSMUSG00000041064.7|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) 	ENSMUST00000141046.1|Pif1|ENSMUSG00000041064.7|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
mm10_v2_chr9_-_58202281_58202295	0.139443	En1	ENSMUST00000163897.1|Islr2|ENSMUSG00000051243.7|immunoglobulin superfamily containing leucine-rich repeat 2
mm10_v2_chr7_-_35056467_35056556	0.136983	En1	ENSMUST00000130491.1|Cebpg|ENSMUSG00000056216.8|CCAAT/enhancer binding protein (C/EBP), gamma
mm10_v2_chr8_-_27128615_27128687	0.130566	En1	ENSMUST00000033877.4|Brf2|ENSMUSG00000031487.4|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like
mm10_v2_chr7_-_127936097_127936097	0.130531	En1	ENSMUST00000150591.1|Prss36|ENSMUSG00000070371.5|protease, serine, 36
mm10_v2_chr10_+_61680302_61680361	0.127931	En1	ENSMUST00000020285.8|Sar1a|ENSMUSG00000020088.9|SAR1 gene homolog A (S. cerevisiae)
mm10_v2_chr10_-_62507737_62507764	0.125736	En1	ENSMUST00000020271.6|Srgn|ENSMUSG00000020077.8|serglycin
mm10_v2_chr2_+_72476159_72476212	0.125574	En1	ENSMUST00000102691.4|Cdca7|ENSMUSG00000055612.9|cell division cycle associated 7
mm10_v2_chr11_+_75679542_75679637	0.123914	En1	ENSMUST00000147718.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm10_v2_chr17_+_8525434_8525450	0.121929	En1	ENSMUST00000115722.1|Pde10a|ENSMUSG00000023868.9|phosphodiesterase 10A
mm10_v2_chr10_-_128922888_128923069	0.117993	En1	ENSMUST00000135161.1|Rdh5|ENSMUSG00000025350.9|retinol dehydrogenase 5
mm10_v2_chr10_+_67572042_67572076	0.112176	En1	ENSMUST00000099661.2|Gm10797|ENSMUSG00000074999.2|predicted gene 10797
mm10_v2_chr14_+_54883377_54883507	0.111868	En1	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr2_-_26021532_26021558	0.111151	En1	ENSMUST00000136750.1|Ubac1|ENSMUSG00000036352.10|ubiquitin associated domain containing 1
mm10_v2_chr4_+_80910646_80910685	0.107905	En1	ENSMUST00000055922.3|Lurap1l|ENSMUSG00000048706.3|leucine rich adaptor protein 1-like
mm10_v2_chr9_-_45936049_45936106	0.101666	En1	ENSMUST00000034590.2|Tagln|ENSMUSG00000032085.4|transgelin
mm10_v2_chr3_+_96635817_96635837	0.100791	En1	ENSMUST00000139739.1|Pex11b|ENSMUSG00000028102.9|peroxisomal biogenesis factor 11 beta
mm10_v2_chr19_+_6942501_6942584	0.100357	En1	ENSMUST00000113423.3|Bad|ENSMUSG00000024959.7|BCL2-associated agonist of cell death
mm10_v2_chr3_-_151762906_151762906	0.0970766	En1	ENSMUST00000046739.4|Ifi44l|ENSMUSG00000039146.4|interferon-induced protein 44 like
mm10_v2_chr2_+_120567652_120567678	0.0970086	En1	ENSMUST00000110711.2|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23
mm10_v2_chr4_-_116075022_116075071	0.0903237	En1	ENSMUST00000050580.4|Uqcrh|ENSMUSG00000063882.6|ubiquinol-cytochrome c reductase hinge protein 	ENSMUST00000078676.5|Uqcrh|ENSMUSG00000063882.6|ubiquinol-cytochrome c reductase hinge protein
mm10_v2_chr4_-_149676043_149676065	0.0892694	En1	ENSMUST00000118704.1|Pik3cd|ENSMUSG00000039936.12|phosphatidylinositol 3-kinase catalytic delta polypeptide
mm10_v2_chr7_+_27842855_27842855	0.0883844	En1	ENSMUST00000108331.2|Zfp59|ENSMUSG00000078779.3|zinc finger protein 59
mm10_v2_chrX_-_101419788_101419914	0.0871901	En1	ENSMUST00000117901.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000120201.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000117637.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000134005.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3 	ENSMUST00000121520.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3
mm10_v2_chr12_-_69582985_69583050	0.082916	En1	ENSMUST00000058639.9|Mettl21d|ENSMUSG00000049882.9|methyltransferase like 21D
mm10_v2_chr14_-_16243309_16243344	0.0808498	En1	ENSMUST00000112625.1|Oxsm|ENSMUSG00000021786.6|3-oxoacyl-ACP synthase, mitochondrial
mm10_v2_chr8_+_85071737_85071769	0.0783597	En1	ENSMUST00000078665.6|Dhps|ENSMUSG00000060038.8|deoxyhypusine synthase
mm10_v2_chr13_+_93303757_93303788	0.0746284	En1	ENSMUST00000109494.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr6_-_113377712_113377776	0.0735152	En1	ENSMUST00000113107.1|Tada3|ENSMUSG00000048930.6|transcriptional adaptor 3 	ENSMUST00000113106.1|Tada3|ENSMUSG00000048930.6|transcriptional adaptor 3
mm10_v2_chr1_-_159168642_159168689	0.0675154	En1	ENSMUST00000077309.1|Gm4953|ENSMUSG00000061992.1|predicted pseudogene 4953
mm10_v2_chr6_+_42286676_42286687	0.064414	En1	ENSMUST00000031894.6|Clcn1|ENSMUSG00000029862.9|chloride channel 1
mm10_v2_chr1_-_74284636_74284738	0.0620377	En1	ENSMUST00000178235.1|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein 	ENSMUST00000006462.7|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein
mm10_v2_chr5_-_145191511_145191548	0.0611214	En1	ENSMUST00000161845.1|Atp5j2|ENSMUSG00000038690.9|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
mm10_v2_chr4_-_41124292_41124455	0.0590724	En1	ENSMUST00000030138.8|Nol6|ENSMUSG00000028430.8|nucleolar protein family 6 (RNA-associated)
mm10_v2_chr3_+_87919490_87919506	0.0573958	En1	ENSMUST00000019854.6|Mrpl24|ENSMUSG00000019710.7|mitochondrial ribosomal protein L24 	ENSMUST00000119968.1|Mrpl24|ENSMUSG00000019710.7|mitochondrial ribosomal protein L24
mm10_v2_chr5_+_67260696_67260711	0.0565707	En1	ENSMUST00000161233.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33 	ENSMUST00000160352.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33
mm10_v2_chr13_-_56895737_56895793	0.0564404	En1	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chr2_+_145903234_145903300	0.0546497	En1	ENSMUST00000110000.1|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENSMUST00000002805.7|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENSMUST00000169732.1|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENSMUST00000134759.2|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit
mm10_v2_chr1_+_171270321_171270360	0.0489638	En1	ENSMUST00000064272.3|B4galt3|ENSMUSG00000052423.8|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 	ENSMUST00000141999.1|B4galt3|ENSMUSG00000052423.8|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 	ENSMUST00000111313.3|B4galt3|ENSMUSG00000052423.8|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
mm10_v2_chr5_-_5559501_5559517	0.048207	En1	ENSMUST00000119521.1|Gtpbp10|ENSMUSG00000040464.9|GTP-binding protein 10 (putative)
mm10_v2_chr4_+_147940859_147940920	0.0443225	En1	ENSMUST00000103232.1|2510039O18Rik|ENSMUSG00000044496.6|RIKEN cDNA 2510039O18 gene
mm10_v2_chr18_+_34331132_34331197	0.0441362	En1	ENSMUST00000072576.3|Srp19|ENSMUSG00000014504.10|signal recognition particle 19 	ENSMUST00000119329.1|Srp19|ENSMUSG00000014504.10|signal recognition particle 19
mm10_v2_chr16_-_46010212_46010223	0.043171	En1	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr11_+_70459940_70460137	0.0412753	En1	ENSMUST00000147289.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15 	ENSMUST00000126105.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15
mm10_v2_chr12_+_33315393_33315411	0.0384396	En1	ENSMUST00000154742.1|Atxn7l1|ENSMUSG00000020564.10|ataxin 7-like 1
mm10_v2_chrX_+_162901762_162901870	0.0376122	En1	ENSMUST00000112302.1|Ctps2|ENSMUSG00000031360.8|cytidine 5'-triphosphate synthase 2 	ENSMUST00000112301.1|Ctps2|ENSMUSG00000031360.8|cytidine 5'-triphosphate synthase 2
mm10_v2_chr16_-_64771146_64771184	0.036499	En1	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr9_-_54950954_54950954	0.0358701	En1	ENSMUST00000054018.5|AY074887|ENSMUSG00000044820.5|cDNA sequence AY074887
mm10_v2_chr14_+_20674311_20674371	0.0344921	En1	ENSMUST00000048657.8|Sec24c|ENSMUSG00000039367.9|Sec24 related gene family, member C (S. cerevisiae)
mm10_v2_chr1_+_105780693_105780762	0.0326981	En1	ENSMUST00000027559.6|Tnfrsf11a|ENSMUSG00000026321.6|tumor necrosis factor receptor superfamily, member 11a
mm10_v2_chr6_+_86628174_86628208	0.0297407	En1	ENSMUST00000043400.6|Asprv1|ENSMUSG00000033508.6|aspartic peptidase, retroviral-like 1
mm10_v2_chr7_+_112742025_112742060	0.0293873	En1	ENSMUST00000164363.1|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr1_-_184883218_184883218	0.0191649	En1	ENSMUST00000048308.5|C130074G19Rik|ENSMUSG00000039349.5|RIKEN cDNA C130074G19 gene
mm10_v2_chr2_+_14229390_14229414	0.0114155	En1	ENSMUST00000028045.2|Mrc1|ENSMUSG00000026712.2|mannose receptor, C type 1
mm10_v2_chrX_-_8145679_8145707	0.0107437	En1	ENSMUST00000115619.1|Rbm3|ENSMUSG00000031167.10|RNA binding motif protein 3 	ENSMUST00000115617.3|Rbm3|ENSMUSG00000031167.10|RNA binding motif protein 3 	ENSMUST00000040010.3|Rbm3|ENSMUSG00000031167.10|RNA binding motif protein 3
mm10_v2_chrX_-_101420348_101420364	0.00978339	En1	ENSMUST00000119699.1|Zmym3|ENSMUSG00000031310.10|zinc finger, MYM-type 3
mm10_v2_chr7_-_127588595_127588595	0.00933266	En1	ENSMUST00000072155.3|Gm166|ENSMUSG00000057176.3|predicted gene 166
mm10_v2_chr15_+_64817694_64817694	0.00801963	En1	ENSMUST00000180105.1|Gm21798|ENSMUSG00000094296.1|predicted gene, 21798
mm10_v2_chr8_+_123212857_123212911	0.00346829	En1	ENSMUST00000060133.6|Spata33|ENSMUSG00000048478.6|spermatogenesis associated 33
mm10_v2_chr1_+_135133272_135133336	0.00272308	En1	ENSMUST00000167080.1|Ptpn7|ENSMUSG00000031506.5|protein tyrosine phosphatase, non-receptor type 7
