mm10_v2_chr6_+_135362931_135362961	2.71386	Foxp2_Foxp3	ENSMUST00000032330.9|Emp1|ENSMUSG00000030208.9|epithelial membrane protein 1
mm10_v2_chr6_+_141524379_141524449	2.3446	Foxp2_Foxp3	ENSMUST00000032362.9|Slco1c1|ENSMUSG00000030235.11|solute carrier organic anion transporter family, member 1c1
mm10_v2_chr4_+_144892813_144892835	2.30251	Foxp2_Foxp3	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr8_+_66386292_66386308	1.96587	Foxp2_Foxp3	ENSMUST00000039540.5|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110253.2|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr11_+_3332426_3332460	1.89079	Foxp2_Foxp3	ENSMUST00000136474.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr7_+_110772604_110772754	1.83573	Foxp2_Foxp3	ENSMUST00000005829.6|Ampd3|ENSMUSG00000005686.10|adenosine monophosphate deaminase 3
mm10_v2_chr1_-_170110491_170110532	1.77636	Foxp2_Foxp3	ENSMUST00000027985.2|Ddr2|ENSMUSG00000026674.3|discoidin domain receptor family, member 2
mm10_v2_chr4_+_144893077_144893103	1.67041	Foxp2_Foxp3	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr15_+_3270767_3271006	1.62127	Foxp2_Foxp3	ENSMUST00000082424.4|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159158.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159216.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000160311.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1
mm10_v2_chr10_+_60106452_60106468	1.50649	Foxp2_Foxp3	ENSMUST00000165024.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr4_+_144893127_144893151	1.48748	Foxp2_Foxp3	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr16_-_22439719_22439733	1.36465	Foxp2_Foxp3	ENSMUST00000079601.6|Etv5|ENSMUSG00000013089.9|ets variant gene 5
mm10_v2_chr16_-_22439570_22439603	1.27296	Foxp2_Foxp3	ENSMUST00000170393.1|Etv5|ENSMUSG00000013089.9|ets variant gene 5
mm10_v2_chr11_+_69095217_69095289	1.18985	Foxp2_Foxp3	ENSMUST00000101004.2|Per1|ENSMUSG00000020893.11|period circadian clock 1
mm10_v2_chr8_-_84773381_84773427	1.18804	Foxp2_Foxp3	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr6_-_5496296_5496316	1.15874	Foxp2_Foxp3	ENSMUST00000019721.4|Pdk4|ENSMUSG00000019577.4|pyruvate dehydrogenase kinase, isoenzyme 4
mm10_v2_chr12_-_100725028_100725081	1.09464	Foxp2_Foxp3	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr1_+_51289106_51289142	1.08235	Foxp2_Foxp3	ENSMUST00000051572.6|Sdpr|ENSMUSG00000045954.6|serum deprivation response
mm10_v2_chr6_-_148444336_148444389	1.07992	Foxp2_Foxp3	ENSMUST00000060095.8|Tmtc1|ENSMUSG00000030306.8|transmembrane and tetratricopeptide repeat containing 1 	ENSMUST00000100772.3|Tmtc1|ENSMUSG00000030306.8|transmembrane and tetratricopeptide repeat containing 1
mm10_v2_chr8_-_84978709_84978748	1.07859	Foxp2_Foxp3	ENSMUST00000064922.5|Junb|ENSMUSG00000052837.5|Jun-B oncogene
mm10_v2_chr2_-_170406501_170406518	1.07249	Foxp2_Foxp3	ENSMUST00000154650.1|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1
mm10_v2_chr19_+_23141183_23141263	1.06922	Foxp2_Foxp3	ENSMUST00000036884.1|Klf9|ENSMUSG00000033863.1|Kruppel-like factor 9
mm10_v2_chr18_+_5593566_5593602	1.03477	Foxp2_Foxp3	ENSMUST00000160910.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr14_-_51913393_51913488	1.02262	Foxp2_Foxp3	ENSMUST00000004673.7|Ndrg2|ENSMUSG00000004558.8|N-myc downstream regulated gene 2 	ENSMUST00000111632.3|Ndrg2|ENSMUSG00000004558.8|N-myc downstream regulated gene 2
mm10_v2_chr15_-_58214882_58214926	1.01877	Foxp2_Foxp3	ENSMUST00000022986.6|Fbxo32|ENSMUSG00000022358.6|F-box protein 32
mm10_v2_chr18_+_69344503_69344530	0.958144	Foxp2_Foxp3	ENSMUST00000114985.3|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr17_+_70522083_70522145	0.957604	Foxp2_Foxp3	ENSMUST00000148486.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1 	ENSMUST00000133717.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr11_+_78499087_78499123	0.953493	Foxp2_Foxp3	ENSMUST00000017488.4|Vtn|ENSMUSG00000017344.4|vitronectin
mm10_v2_chr7_+_82175156_82175199	0.933174	Foxp2_Foxp3	ENSMUST00000180243.1|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr5_+_16553488_16553550	0.916535	Foxp2_Foxp3	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr17_+_70561739_70561787	0.90626	Foxp2_Foxp3	ENSMUST00000097288.2|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr3_+_52268337_52268388	0.895183	Foxp2_Foxp3	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr1_+_34005872_34005908	0.891752	Foxp2_Foxp3	ENSMUST00000182296.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr19_+_4855129_4855269	0.889522	Foxp2_Foxp3	ENSMUST00000119694.1|Ctsf|ENSMUSG00000083282.2|cathepsin F
mm10_v2_chr4_-_53159885_53159900	0.871388	Foxp2_Foxp3	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr7_+_113207465_113207595	0.870194	Foxp2_Foxp3	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr13_-_93499803_93499825	0.845314	Foxp2_Foxp3	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr12_+_38781093_38781129	0.840802	Foxp2_Foxp3	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr6_+_134830145_134830179	0.834035	Foxp2_Foxp3	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chrX_+_101376359_101376378	0.830569	Foxp2_Foxp3	ENSMUST00000119080.1|Gjb1|ENSMUSG00000047797.8|gap junction protein, beta 1
mm10_v2_chr9_-_45955170_45955186	0.827902	Foxp2_Foxp3	ENSMUST00000162072.1|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr5_+_107437908_107437997	0.765147	Foxp2_Foxp3	ENSMUST00000094541.2|Btbd8|ENSMUSG00000070632.3|BTB (POZ) domain containing 8
mm10_v2_chr5_+_122643878_122644009	0.763518	Foxp2_Foxp3	ENSMUST00000100737.3|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000121489.1|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000031425.8|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000086247.5|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7
mm10_v2_chr18_+_37489465_37489465	0.760378	Foxp2_Foxp3	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr8_-_46294592_46294671	0.742431	Foxp2_Foxp3	ENSMUST00000058636.7|Helt|ENSMUSG00000047171.7|helt bHLH transcription factor
mm10_v2_chr11_-_116110211_116110259	0.728876	Foxp2_Foxp3	ENSMUST00000106441.1|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47 	ENSMUST00000021120.5|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47
mm10_v2_chr7_-_79149042_79149062	0.726455	Foxp2_Foxp3	ENSMUST00000032825.8|Mfge8|ENSMUSG00000030605.9|milk fat globule-EGF factor 8 protein 	ENSMUST00000107409.3|Mfge8|ENSMUSG00000030605.9|milk fat globule-EGF factor 8 protein
mm10_v2_chr8_+_19682268_19682270	0.706981	Foxp2_Foxp3	ENSMUST00000153710.1|Gm6483|ENSMUSG00000087153.1|predicted gene 6483 	ENSMUST00000127799.1|Gm6483|ENSMUSG00000087153.1|predicted gene 6483
mm10_v2_chr11_+_110968016_110968042	0.706653	Foxp2_Foxp3	ENSMUST00000106636.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENSMUST00000180023.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr2_-_7395879_7395912	0.695436	Foxp2_Foxp3	ENSMUST00000182404.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr6_+_121636173_121636237	0.692999	Foxp2_Foxp3	ENSMUST00000032203.7|A2m|ENSMUSG00000030111.8|alpha-2-macroglobulin
mm10_v2_chr5_+_3928033_3928178	0.691417	Foxp2_Foxp3	ENSMUST00000143365.1|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr14_-_93888732_93888732	0.688287	Foxp2_Foxp3	ENSMUST00000068992.2|Pcdh9|ENSMUSG00000055421.3|protocadherin 9
mm10_v2_chr14_-_55560340_55560406	0.685815	Foxp2_Foxp3	ENSMUST00000066106.3|A730061H03Rik|ENSMUSG00000053588.3|RIKEN cDNA A730061H03 gene
mm10_v2_chr1_+_66386968_66386999	0.684583	Foxp2_Foxp3	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr8_+_20136455_20136574	0.680534	Foxp2_Foxp3	ENSMUST00000179299.1|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811 	ENSMUST00000096485.4|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811
mm10_v2_chr15_-_54919961_54920037	0.677234	Foxp2_Foxp3	ENSMUST00000167541.2|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000041591.9|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000173516.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr4_-_14621805_14621819	0.676	Foxp2_Foxp3	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr17_+_70522149_70522169	0.668402	Foxp2_Foxp3	ENSMUST00000140728.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr11_-_101226414_101226463	0.655219	Foxp2_Foxp3	ENSMUST00000100417.2|Ezh1|ENSMUSG00000006920.8|enhancer of zeste homolog 1 (Drosophila) 	ENSMUST00000107285.1|Ezh1|ENSMUSG00000006920.8|enhancer of zeste homolog 1 (Drosophila) 	ENSMUST00000107284.1|Ezh1|ENSMUSG00000006920.8|enhancer of zeste homolog 1 (Drosophila)
mm10_v2_chr6_-_39725193_39725357	0.648624	Foxp2_Foxp3	ENSMUST00000101497.3|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr19_-_28963863_28963908	0.639053	Foxp2_Foxp3	ENSMUST00000161813.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr13_+_89540636_89540678	0.620191	Foxp2_Foxp3	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr13_+_5861489_5861501	0.615048	Foxp2_Foxp3	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr9_-_40455670_40455777	0.614793	Foxp2_Foxp3	ENSMUST00000165104.1|Gramd1b|ENSMUSG00000040111.8|GRAM domain containing 1B 	ENSMUST00000045682.5|Gramd1b|ENSMUSG00000040111.8|GRAM domain containing 1B
mm10_v2_chr10_-_93310963_93310989	0.611715	Foxp2_Foxp3	ENSMUST00000151153.1|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr6_+_53573364_53573394	0.60657	Foxp2_Foxp3	ENSMUST00000047450.7|Creb5|ENSMUSG00000053007.6|cAMP responsive element binding protein 5
mm10_v2_chr12_+_35047180_35047230	0.602981	Foxp2_Foxp3	ENSMUST00000048519.9|Snx13|ENSMUSG00000020590.9|sorting nexin 13 	ENSMUST00000163677.1|Snx13|ENSMUSG00000020590.9|sorting nexin 13
mm10_v2_chr1_-_64956807_64956824	0.60242	Foxp2_Foxp3	ENSMUST00000097713.1|Plekhm3|ENSMUSG00000051344.7|pleckstrin homology domain containing, family M, member 3
mm10_v2_chr9_+_13619990_13619990	0.5961	Foxp2_Foxp3	ENSMUST00000159294.1|Maml2|ENSMUSG00000031925.10|mastermind like 2 (Drosophila)
mm10_v2_chr3_-_146770218_146770261	0.591841	Foxp2_Foxp3	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr2_+_28641227_28641262	0.591623	Foxp2_Foxp3	ENSMUST00000028155.5|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113869.1|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113867.2|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1
mm10_v2_chr9_-_112187898_112187938	0.590437	Foxp2_Foxp3	ENSMUST00000178410.1|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000172380.3|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr9_-_42461414_42461461	0.581885	Foxp2_Foxp3	ENSMUST00000066179.7|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like
mm10_v2_chr18_-_39489776_39489868	0.570742	Foxp2_Foxp3	ENSMUST00000025300.6|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr11_+_54438188_54438220	0.568687	Foxp2_Foxp3	ENSMUST00000046835.7|Fnip1|ENSMUSG00000035992.9|folliculin interacting protein 1
mm10_v2_chrX_+_68678541_68678554	0.564974	Foxp2_Foxp3	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr7_+_19359740_19359770	0.560591	Foxp2_Foxp3	ENSMUST00000140836.1|Ppp1r13l|ENSMUSG00000040734.8|protein phosphatase 1, regulatory (inhibitor) subunit 13 like
mm10_v2_chr10_+_84576626_84576626	0.560388	Foxp2_Foxp3	ENSMUST00000020223.7|Tcp11l2|ENSMUSG00000020034.7|t-complex 11 (mouse) like 2
mm10_v2_chr4_-_151108244_151108303	0.550709	Foxp2_Foxp3	ENSMUST00000131948.1|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr9_+_44072196_44072211	0.544745	Foxp2_Foxp3	ENSMUST00000176671.1|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr14_-_88471396_88471396	0.542787	Foxp2_Foxp3	ENSMUST00000061628.5|Pcdh20|ENSMUSG00000050505.6|protocadherin 20
mm10_v2_chr10_-_93311073_93311161	0.538181	Foxp2_Foxp3	ENSMUST00000008542.5|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr15_+_99392948_99393022	0.537381	Foxp2_Foxp3	ENSMUST00000161250.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6 	ENSMUST00000160635.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6 	ENSMUST00000161778.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr2_+_112265809_112265858	0.537048	Foxp2_Foxp3	ENSMUST00000110991.2|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr5_+_139389785_139389920	0.531628	Foxp2_Foxp3	ENSMUST00000100514.2|Gpr146|ENSMUSG00000044197.7|G protein-coupled receptor 146
mm10_v2_chr1_-_64956731_64956782	0.530136	Foxp2_Foxp3	ENSMUST00000123225.1|Plekhm3|ENSMUSG00000051344.7|pleckstrin homology domain containing, family M, member 3
mm10_v2_chr15_+_99393219_99393248	0.529469	Foxp2_Foxp3	ENSMUST00000159209.1|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr15_+_92597104_92597121	0.523868	Foxp2_Foxp3	ENSMUST00000035399.8|Pdzrn4|ENSMUSG00000036218.9|PDZ domain containing RING finger 4
mm10_v2_chr17_+_55445375_55445389	0.523365	Foxp2_Foxp3	ENSMUST00000133899.1|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2 	ENSMUST00000086878.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr1_+_9601163_9601256	0.517614	Foxp2_Foxp3	ENSMUST00000088666.3|3110035E14Rik|ENSMUSG00000067879.3|RIKEN cDNA 3110035E14 gene
mm10_v2_chr18_-_34624562_34624601	0.514252	Foxp2_Foxp3	ENSMUST00000003876.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115766.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000097626.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115765.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8
mm10_v2_chr15_+_6422240_6422327	0.510531	Foxp2_Foxp3	ENSMUST00000163082.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr12_+_38780817_38780854	0.506848	Foxp2_Foxp3	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_-_84450944_84451018	0.505732	Foxp2_Foxp3	ENSMUST00000085192.5|Aldh6a1|ENSMUSG00000021238.10|aldehyde dehydrogenase family 6, subfamily A1
mm10_v2_chr18_+_37496997_37496997	0.502913	Foxp2_Foxp3	ENSMUST00000059571.5|Pcdhb19|ENSMUSG00000043313.5|protocadherin beta 19
mm10_v2_chr9_+_87015537_87015537	0.502644	Foxp2_Foxp3	ENSMUST00000058846.4|Ripply2|ENSMUSG00000047897.4|ripply2 homolog (zebrafish)
mm10_v2_chr11_+_3330781_3330812	0.502274	Foxp2_Foxp3	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr7_-_44849075_44849075	0.502148	Foxp2_Foxp3	ENSMUST00000047085.8|Tbc1d17|ENSMUSG00000038520.8|TBC1 domain family, member 17
mm10_v2_chr15_-_54920115_54920146	0.498432	Foxp2_Foxp3	ENSMUST00000171545.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr10_-_18234930_18235008	0.494347	Foxp2_Foxp3	ENSMUST00000052648.8|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000080860.6|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000173243.1|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A
mm10_v2_chrX_+_68678624_68678639	0.481094	Foxp2_Foxp3	ENSMUST00000114656.1|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr16_+_20097554_20097596	0.477714	Foxp2_Foxp3	ENSMUST00000023509.3|Klhl24|ENSMUSG00000062901.2|kelch-like 24
mm10_v2_chr3_+_65109343_65109420	0.476108	Foxp2_Foxp3	ENSMUST00000159525.1|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENSMUST00000049230.8|Kcnab1|ENSMUSG00000027827.10|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm10_v2_chr1_-_128592284_128592307	0.471089	Foxp2_Foxp3	ENSMUST00000052172.6|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4 	ENSMUST00000142893.1|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4
mm10_v2_chr9_-_45955226_45955250	0.468922	Foxp2_Foxp3	ENSMUST00000038488.9|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr4_+_102570065_102570124	0.468608	Foxp2_Foxp3	ENSMUST00000097950.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr18_-_39489880_39489915	0.461896	Foxp2_Foxp3	ENSMUST00000152853.1|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr16_-_97170707_97170759	0.460336	Foxp2_Foxp3	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr15_-_56694525_56694554	0.459256	Foxp2_Foxp3	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr6_+_134830216_134830270	0.458843	Foxp2_Foxp3	ENSMUST00000111937.1|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr12_+_74297474_74297474	0.455221	Foxp2_Foxp3	ENSMUST00000072100.3|Dbpht2|ENSMUSG00000029878.5|DNA binding protein with his-thr domain
mm10_v2_chr5_+_81021202_81021241	0.450199	Foxp2_Foxp3	ENSMUST00000117253.1|Lphn3|ENSMUSG00000037605.10|latrophilin 3 	ENSMUST00000120128.1|Lphn3|ENSMUSG00000037605.10|latrophilin 3
mm10_v2_chr15_+_25940846_25940934	0.448119	Foxp2_Foxp3	ENSMUST00000110438.1|Fam134b|ENSMUSG00000022270.9|family with sequence similarity 134, member B
mm10_v2_chr10_+_39732099_39732140	0.443425	Foxp2_Foxp3	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr11_-_107348130_107348179	0.440449	Foxp2_Foxp3	ENSMUST00000134763.1|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr15_+_99392882_99392903	0.43892	Foxp2_Foxp3	ENSMUST00000023749.8|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr11_+_78176711_78176761	0.437724	Foxp2_Foxp3	ENSMUST00000098545.5|Tlcd1|ENSMUSG00000019437.11|TLC domain containing 1
mm10_v2_chr2_+_19658055_19658072	0.435836	Foxp2_Foxp3	ENSMUST00000052168.4|Otud1|ENSMUSG00000043415.4|OTU domain containing 1
mm10_v2_chr10_+_23894688_23894688	0.431023	Foxp2_Foxp3	ENSMUST00000041416.7|Vnn1|ENSMUSG00000037440.7|vanin 1
mm10_v2_chr1_-_180195981_180196075	0.425881	Foxp2_Foxp3	ENSMUST00000027766.6|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3 	ENSMUST00000161814.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3
mm10_v2_chr2_-_64975762_64975795	0.42497	Foxp2_Foxp3	ENSMUST00000156765.1|Grb14|ENSMUSG00000026888.8|growth factor receptor bound protein 14
mm10_v2_chr5_-_96164147_96164201	0.419504	Foxp2_Foxp3	ENSMUST00000137207.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr9_-_60838200_60838200	0.418685	Foxp2_Foxp3	ENSMUST00000063858.7|Gm9869|ENSMUSG00000052143.7|predicted gene 9869
mm10_v2_chr19_-_36736653_36736670	0.415698	Foxp2_Foxp3	ENSMUST00000087321.2|Ppp1r3c|ENSMUSG00000067279.2|protein phosphatase 1, regulatory (inhibitor) subunit 3C
mm10_v2_chrX_+_103356464_103356488	0.412621	Foxp2_Foxp3	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr18_+_69593361_69593450	0.412572	Foxp2_Foxp3	ENSMUST00000114978.2|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114977.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr8_+_20567716_20567716	0.408833	Foxp2_Foxp3	ENSMUST00000178995.1|Gm21092|ENSMUSG00000095403.1|predicted gene, 21092
mm10_v2_chr6_-_137571007_137571032	0.400211	Foxp2_Foxp3	ENSMUST00000100841.2|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr15_-_66969616_66969647	0.399204	Foxp2_Foxp3	ENSMUST00000170903.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000166420.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000005256.6|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000164070.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1
mm10_v2_chr19_-_37207293_37207508	0.399194	Foxp2_Foxp3	ENSMUST00000132580.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000079754.4|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000136286.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126188.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126781.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr2_+_136713444_136713492	0.395925	Foxp2_Foxp3	ENSMUST00000028727.4|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25 	ENSMUST00000110098.3|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25
mm10_v2_chr4_-_118409219_118409282	0.393896	Foxp2_Foxp3	ENSMUST00000075406.5|Szt2|ENSMUSG00000033253.12|seizure threshold 2
mm10_v2_chr13_+_80886095_80886201	0.39252	Foxp2_Foxp3	ENSMUST00000161441.1|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr5_-_148392810_148392816	0.38935	Foxp2_Foxp3	ENSMUST00000138257.1|Slc7a1|ENSMUSG00000041313.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm10_v2_chr10_+_79716588_79716666	0.389108	Foxp2_Foxp3	ENSMUST00000099513.1|Hcn2|ENSMUSG00000020331.3|hyperpolarization-activated, cyclic nucleotide-gated K+ 2 	ENSMUST00000020581.2|Hcn2|ENSMUSG00000020331.3|hyperpolarization-activated, cyclic nucleotide-gated K+ 2
mm10_v2_chr13_+_104178797_104178872	0.386617	Foxp2_Foxp3	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chrX_+_68678712_68678817	0.382984	Foxp2_Foxp3	ENSMUST00000114654.1|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1 	ENSMUST00000114655.1|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1 	ENSMUST00000114657.2|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1 	ENSMUST00000114653.1|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr18_-_43393346_43393381	0.382595	Foxp2_Foxp3	ENSMUST00000025379.7|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr2_-_73892530_73892555	0.376988	Foxp2_Foxp3	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr7_+_24907618_24907647	0.375762	Foxp2_Foxp3	ENSMUST00000151121.1|Arhgef1|ENSMUSG00000040940.12|Rho guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr3_+_5218516_5218544	0.373962	Foxp2_Foxp3	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr10_+_62071014_62071020	0.372429	Foxp2_Foxp3	ENSMUST00000053865.5|Gm5424|ENSMUSG00000046687.5|predicted gene 5424
mm10_v2_chr9_-_99358518_99358552	0.368873	Foxp2_Foxp3	ENSMUST00000042158.6|Esyt3|ENSMUSG00000037681.7|extended synaptotagmin-like protein 3
mm10_v2_chr5_+_64812336_64812350	0.366727	Foxp2_Foxp3	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr9_+_110333402_110333636	0.365861	Foxp2_Foxp3	ENSMUST00000133114.1|Scap|ENSMUSG00000032485.8|SREBF chaperone 	ENSMUST00000125759.1|Scap|ENSMUSG00000032485.8|SREBF chaperone
mm10_v2_chr2_-_51973219_51973234	0.365162	Foxp2_Foxp3	ENSMUST00000028314.2|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor
mm10_v2_chr14_+_120275669_120275714	0.363307	Foxp2_Foxp3	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr2_-_65529275_65529404	0.363179	Foxp2_Foxp3	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr19_+_26750939_26750967	0.36018	Foxp2_Foxp3	ENSMUST00000175953.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr3_+_138860489_138860506	0.355895	Foxp2_Foxp3	ENSMUST00000121826.1|Tspan5|ENSMUSG00000028152.4|tetraspanin 5
mm10_v2_chr5_+_3928267_3928300	0.355575	Foxp2_Foxp3	ENSMUST00000044492.8|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chrX_+_159840463_159840481	0.351012	Foxp2_Foxp3	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr10_-_105574435_105574451	0.348724	Foxp2_Foxp3	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr2_-_51972990_51973022	0.348282	Foxp2_Foxp3	ENSMUST00000145481.1|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor 	ENSMUST00000112705.2|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor
mm10_v2_chr9_-_45954966_45954987	0.347566	Foxp2_Foxp3	ENSMUST00000114573.2|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chrX_+_7722214_7722260	0.346788	Foxp2_Foxp3	ENSMUST00000043045.2|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116634.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115689.3|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000131077.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115688.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116633.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45
mm10_v2_chr12_-_31950210_31950246	0.345073	Foxp2_Foxp3	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr11_+_110968056_110968070	0.343179	Foxp2_Foxp3	ENSMUST00000125692.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr8_+_45885479_45885494	0.338558	Foxp2_Foxp3	ENSMUST00000034053.5|Pdlim3|ENSMUSG00000031636.6|PDZ and LIM domain 3
mm10_v2_chr10_+_94576254_94576270	0.337096	Foxp2_Foxp3	ENSMUST00000117929.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr15_+_25742314_25742409	0.33598	Foxp2_Foxp3	ENSMUST00000135981.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr18_-_38918642_38918771	0.33594	Foxp2_Foxp3	ENSMUST00000040647.4|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr9_-_44802951_44802961	0.33577	Foxp2_Foxp3	ENSMUST00000044694.6|Ttc36|ENSMUSG00000039438.6|tetratricopeptide repeat domain 36
mm10_v2_chr13_-_98815408_98815449	0.335725	Foxp2_Foxp3	ENSMUST00000040340.8|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000099277.4|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000179563.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000109403.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2
mm10_v2_chr2_-_20943413_20943424	0.333614	Foxp2_Foxp3	ENSMUST00000140230.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr3_-_146781351_146781431	0.330657	Foxp2_Foxp3	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr19_+_26623419_26623471	0.329771	Foxp2_Foxp3	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr13_+_104287855_104287882	0.327699	Foxp2_Foxp3	ENSMUST00000065766.6|Adamts6|ENSMUSG00000046169.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm10_v2_chr16_+_43510267_43510308	0.32713	Foxp2_Foxp3	ENSMUST00000114695.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr14_+_61607455_61607482	0.324945	Foxp2_Foxp3	ENSMUST00000051184.8|Kcnrg|ENSMUSG00000046168.8|potassium channel regulator
mm10_v2_chr3_+_19957037_19957073	0.324314	Foxp2_Foxp3	ENSMUST00000091309.5|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000108329.1|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000003714.6|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr3_+_76075583_76075583	0.323663	Foxp2_Foxp3	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr14_-_18239053_18239127	0.320845	Foxp2_Foxp3	ENSMUST00000090543.5|Nr1d2|ENSMUSG00000021775.10|nuclear receptor subfamily 1, group D, member 2
mm10_v2_chr11_+_3330401_3330541	0.320731	Foxp2_Foxp3	ENSMUST00000045153.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr14_+_55560480_55560533	0.320717	Foxp2_Foxp3	ENSMUST00000121622.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000143431.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000150481.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr9_-_103230415_103230444	0.318305	Foxp2_Foxp3	ENSMUST00000035158.9|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr12_+_95695350_95695365	0.317413	Foxp2_Foxp3	ENSMUST00000110117.1|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr12_+_4133394_4133411	0.312125	Foxp2_Foxp3	ENSMUST00000152065.1|Adcy3|ENSMUSG00000020654.9|adenylate cyclase 3 	ENSMUST00000127756.1|Adcy3|ENSMUSG00000020654.9|adenylate cyclase 3
mm10_v2_chr4_-_59549243_59549303	0.307593	Foxp2_Foxp3	ENSMUST00000173699.1|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000173884.1|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000102883.4|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000174586.1|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3
mm10_v2_chr13_+_29016267_29016303	0.305844	Foxp2_Foxp3	ENSMUST00000140415.1|A330102I10Rik|ENSMUSG00000086363.1|RIKEN cDNA A330102I10 gene
mm10_v2_chr4_+_97772734_97772848	0.30568	Foxp2_Foxp3	ENSMUST00000152023.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr12_-_99393010_99393090	0.303197	Foxp2_Foxp3	ENSMUST00000177451.1|Foxn3|ENSMUSG00000033713.5|forkhead box N3
mm10_v2_chr1_-_133753681_133753857	0.302587	Foxp2_Foxp3	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr5_-_146220901_146220987	0.301896	Foxp2_Foxp3	ENSMUST00000169407.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000161331.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000159074.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000067837.3|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr18_+_37504264_37504296	0.300662	Foxp2_Foxp3	ENSMUST00000052179.6|Pcdhb20|ENSMUSG00000046191.6|protocadherin beta 20
mm10_v2_chr10_+_123264076_123264125	0.299584	Foxp2_Foxp3	ENSMUST00000050756.7|Fam19a2|ENSMUSG00000044071.7|family with sequence similarity 19, member A2
mm10_v2_chr7_+_66839726_66839750	0.299326	Foxp2_Foxp3	ENSMUST00000098382.3|Adamts17|ENSMUSG00000058145.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm10_v2_chr11_-_52282564_52282579	0.295644	Foxp2_Foxp3	ENSMUST00000086844.3|Tcf7|ENSMUSG00000000782.9|transcription factor 7, T cell specific
mm10_v2_chrX_+_94234594_94234604	0.290827	Foxp2_Foxp3	ENSMUST00000153900.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr16_-_4880284_4880315	0.290175	Foxp2_Foxp3	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr2_-_7396192_7396241	0.289324	Foxp2_Foxp3	ENSMUST00000137733.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr6_-_59024470_59024549	0.285596	Foxp2_Foxp3	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr11_-_106715251_106715394	0.285087	Foxp2_Foxp3	ENSMUST00000080853.4|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000183610.1|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000103069.3|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000106796.2|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1
mm10_v2_chr2_+_3770673_3770708	0.280672	Foxp2_Foxp3	ENSMUST00000177037.1|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chrX_+_94234921_94234972	0.278271	Foxp2_Foxp3	ENSMUST00000113908.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15 	ENSMUST00000113916.3|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr9_-_77251829_77251838	0.277935	Foxp2_Foxp3	ENSMUST00000184322.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184316.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr1_+_180101144_180101144	0.277704	Foxp2_Foxp3	ENSMUST00000133890.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr2_-_52558539_52558571	0.277197	Foxp2_Foxp3	ENSMUST00000102760.3|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit 	ENSMUST00000102761.2|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit
mm10_v2_chr10_+_39420009_39420074	0.276995	Foxp2_Foxp3	ENSMUST00000157009.1|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene
mm10_v2_chr19_+_38264761_38264831	0.2762	Foxp2_Foxp3	ENSMUST00000087252.5|Lgi1|ENSMUSG00000067242.5|leucine-rich repeat LGI family, member 1
mm10_v2_chr18_-_80708115_80708180	0.274164	Foxp2_Foxp3	ENSMUST00000167977.1|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 	ENSMUST00000035800.7|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
mm10_v2_chr11_+_75531690_75531743	0.272242	Foxp2_Foxp3	ENSMUST00000149727.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000042561.7|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000108433.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000143035.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr7_-_12422751_12422751	0.271878	Foxp2_Foxp3	ENSMUST00000080348.5|Zfp551|ENSMUSG00000034071.8|zinc fingr protein 551
mm10_v2_chr2_+_24976033_24976110	0.271544	Foxp2_Foxp3	ENSMUST00000045295.7|Pnpla7|ENSMUSG00000036833.10|patatin-like phospholipase domain containing 7 	ENSMUST00000153618.1|Pnpla7|ENSMUSG00000036833.10|patatin-like phospholipase domain containing 7 	ENSMUST00000152777.1|Pnpla7|ENSMUSG00000036833.10|patatin-like phospholipase domain containing 7
mm10_v2_chr18_+_77938452_77938477	0.269787	Foxp2_Foxp3	ENSMUST00000044622.5|Epg5|ENSMUSG00000039840.7|ectopic P-granules autophagy protein 5 homolog (C. elegans)
mm10_v2_chr10_+_21882184_21882239	0.269194	Foxp2_Foxp3	ENSMUST00000120509.1|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr12_+_105563123_105563172	0.265126	Foxp2_Foxp3	ENSMUST00000001652.5|Bdkrb2|ENSMUSG00000021070.5|bradykinin receptor, beta 2
mm10_v2_chr2_-_73312701_73312724	0.264328	Foxp2_Foxp3	ENSMUST00000058615.9|Cir1|ENSMUSG00000041777.11|corepressor interacting with RBPJ, 1
mm10_v2_chr14_-_68655804_68655842	0.262386	Foxp2_Foxp3	ENSMUST00000111072.1|Adam28|ENSMUSG00000014725.8|a disintegrin and metallopeptidase domain 28 	ENSMUST00000022642.5|Adam28|ENSMUSG00000014725.8|a disintegrin and metallopeptidase domain 28
mm10_v2_chr15_+_97784355_97784457	0.260371	Foxp2_Foxp3	ENSMUST00000117892.1|Slc48a1|ENSMUSG00000081534.2|solute carrier family 48 (heme transporter), member 1
mm10_v2_chr2_+_52072823_52072854	0.256458	Foxp2_Foxp3	ENSMUST00000112693.2|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast) 	ENSMUST00000069794.5|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast)
mm10_v2_chr3_+_68584154_68584181	0.255942	Foxp2_Foxp3	ENSMUST00000182997.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr13_-_12464925_12464949	0.255678	Foxp2_Foxp3	ENSMUST00000124888.1|Lgals8|ENSMUSG00000057554.7|lectin, galactose binding, soluble 8
mm10_v2_chr14_+_48120841_48120869	0.251495	Foxp2_Foxp3	ENSMUST00000073150.4|Peli2|ENSMUSG00000021846.8|pellino 2
mm10_v2_chr18_+_37447641_37447674	0.250899	Foxp2_Foxp3	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr16_+_87354185_87354249	0.249514	Foxp2_Foxp3	ENSMUST00000054442.4|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000118310.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000120284.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative) 	ENSMUST00000118115.1|N6amt1|ENSMUSG00000044442.5|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm10_v2_chr7_-_4844665_4844699	0.249105	Foxp2_Foxp3	ENSMUST00000066041.5|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis) 	ENSMUST00000172377.1|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis)
mm10_v2_chr1_-_152625212_152625220	0.249047	Foxp2_Foxp3	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr19_-_28010995_28011054	0.248669	Foxp2_Foxp3	ENSMUST00000172907.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression) 	ENSMUST00000046898.9|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr1_+_24177610_24177711	0.247449	Foxp2_Foxp3	ENSMUST00000054588.8|Col9a1|ENSMUSG00000026147.10|collagen, type IX, alpha 1
mm10_v2_chr2_-_73892588_73892616	0.246438	Foxp2_Foxp3	ENSMUST00000154456.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000090802.4|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000055833.5|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr2_+_124610573_124610613	0.243851	Foxp2_Foxp3	ENSMUST00000103239.3|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENSMUST00000103240.2|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm10_v2_chr2_+_112284561_112284610	0.243008	Foxp2_Foxp3	ENSMUST00000053666.7|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr6_-_87809757_87809787	0.24232	Foxp2_Foxp3	ENSMUST00000032134.7|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family
mm10_v2_chr1_-_87573825_87573871	0.240765	Foxp2_Foxp3	ENSMUST00000068681.5|Ngef|ENSMUSG00000026259.8|neuronal guanine nucleotide exchange factor
mm10_v2_chr1_-_190170178_190170237	0.2376	Foxp2_Foxp3	ENSMUST00000177288.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr5_-_107875035_107875107	0.237128	Foxp2_Foxp3	ENSMUST00000138111.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5 	ENSMUST00000112642.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5
mm10_v2_chr11_-_121388186_121388267	0.235927	Foxp2_Foxp3	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr6_-_39725448_39725478	0.229399	Foxp2_Foxp3	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr18_+_37742088_37742137	0.229259	Foxp2_Foxp3	ENSMUST00000003599.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr1_-_134955908_134955955	0.229015	Foxp2_Foxp3	ENSMUST00000045665.6|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000086444.4|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000112163.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chr18_+_36952621_36952766	0.228506	Foxp2_Foxp3	ENSMUST00000115661.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr14_+_54259227_54259241	0.228442	Foxp2_Foxp3	ENSMUST00000041197.7|Abhd4|ENSMUSG00000040997.7|abhydrolase domain containing 4
mm10_v2_chr10_+_69534208_69534222	0.227062	Foxp2_Foxp3	ENSMUST00000182439.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092434.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092432.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092431.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000054167.8|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000047061.6|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr17_+_35076902_35077073	0.226588	Foxp2_Foxp3	ENSMUST00000172494.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000172678.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000013910.4|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E
mm10_v2_chr17_+_3532554_3532554	0.226575	Foxp2_Foxp3	ENSMUST00000168560.1|Cldn20|ENSMUSG00000091530.1|claudin 20
mm10_v2_chr3_+_135825648_135825664	0.22612	Foxp2_Foxp3	ENSMUST00000180196.1|Slc39a8|ENSMUSG00000053897.9|solute carrier family 39 (metal ion transporter), member 8
mm10_v2_chr16_+_43235856_43235880	0.225379	Foxp2_Foxp3	ENSMUST00000146708.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr5_-_146221391_146221420	0.223091	Foxp2_Foxp3	ENSMUST00000161574.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr12_-_86079019_86079041	0.222645	Foxp2_Foxp3	ENSMUST00000003687.6|Tgfb3|ENSMUSG00000021253.6|transforming growth factor, beta 3
mm10_v2_chr15_+_25752860_25752979	0.222506	Foxp2_Foxp3	ENSMUST00000022882.5|Myo10|ENSMUSG00000022272.11|myosin X 	ENSMUST00000135173.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chrX_+_71663665_71663671	0.222133	Foxp2_Foxp3	ENSMUST00000070449.5|Gpr50|ENSMUSG00000056380.7|G-protein-coupled receptor 50
mm10_v2_chr4_-_45012093_45012159	0.219355	Foxp2_Foxp3	ENSMUST00000131991.1|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5
mm10_v2_chr3_+_76593550_76593550	0.218346	Foxp2_Foxp3	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr6_-_134897815_134897925	0.218137	Foxp2_Foxp3	ENSMUST00000165392.1|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19 	ENSMUST00000046255.7|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19 	ENSMUST00000111932.1|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19 	ENSMUST00000116515.2|Gpr19|ENSMUSG00000032641.11|G protein-coupled receptor 19
mm10_v2_chr1_+_179546303_179546370	0.218025	Foxp2_Foxp3	ENSMUST00000040706.8|Cnst|ENSMUSG00000038949.8|consortin, connexin sorting protein
mm10_v2_chr2_-_73892619_73892639	0.217793	Foxp2_Foxp3	ENSMUST00000112007.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112016.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr11_+_53567361_53567526	0.21717	Foxp2_Foxp3	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr2_-_66440753_66440846	0.217072	Foxp2_Foxp3	ENSMUST00000112371.2|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha 	ENSMUST00000138910.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chr7_-_12422488_12422488	0.216714	Foxp2_Foxp3	ENSMUST00000120220.1|Zfp551|ENSMUSG00000034071.8|zinc fingr protein 551
mm10_v2_chr18_-_47333311_47333373	0.216685	Foxp2_Foxp3	ENSMUST00000126684.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000156422.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr7_+_64287665_64287676	0.216663	Foxp2_Foxp3	ENSMUST00000032736.4|Mtmr10|ENSMUSG00000030522.8|myotubularin related protein 10
mm10_v2_chr2_+_145785980_145786152	0.215332	Foxp2_Foxp3	ENSMUST00000110005.1|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2 	ENSMUST00000094480.4|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2
mm10_v2_chr5_+_31048627_31048785	0.215295	Foxp2_Foxp3	ENSMUST00000013766.6|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor 	ENSMUST00000173215.1|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor 	ENSMUST00000153643.1|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor 	ENSMUST00000114659.2|Atraid|ENSMUSG00000013622.9|all-trans retinoic acid induced differentiation factor
mm10_v2_chr18_+_51117754_51117898	0.213378	Foxp2_Foxp3	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr6_+_34709610_34709635	0.21136	Foxp2_Foxp3	ENSMUST00000031775.6|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr11_+_87578384_87578470	0.211068	Foxp2_Foxp3	ENSMUST00000107962.1|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000122067.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr11_+_17051818_17051899	0.210874	Foxp2_Foxp3	ENSMUST00000058159.5|Cnrip1|ENSMUSG00000044629.5|cannabinoid receptor interacting protein 1
mm10_v2_chrX_+_7722267_7722362	0.210809	Foxp2_Foxp3	ENSMUST00000125991.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000148624.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45
mm10_v2_chr5_+_21372642_21372714	0.210526	Foxp2_Foxp3	ENSMUST00000035799.5|Fgl2|ENSMUSG00000039899.5|fibrinogen-like protein 2
mm10_v2_chr10_-_20725023_20725078	0.208341	Foxp2_Foxp3	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr9_-_112187766_112187862	0.207175	Foxp2_Foxp3	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr14_+_55560904_55560974	0.206657	Foxp2_Foxp3	ENSMUST00000072530.4|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000128490.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr2_+_146855861_146855926	0.206066	Foxp2_Foxp3	ENSMUST00000099278.2|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1 	ENSMUST00000156232.1|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1
mm10_v2_chr5_-_34187670_34187749	0.205936	Foxp2_Foxp3	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chr1_+_16688405_16688458	0.203894	Foxp2_Foxp3	ENSMUST00000026881.4|Ly96|ENSMUSG00000025779.4|lymphocyte antigen 96
mm10_v2_chr18_-_43373248_43373272	0.20383	Foxp2_Foxp3	ENSMUST00000118043.1|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr18_-_43059418_43059471	0.201301	Foxp2_Foxp3	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr19_+_44992127_44992136	0.1988	Foxp2_Foxp3	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr13_+_37345338_37345365	0.197896	Foxp2_Foxp3	ENSMUST00000021860.5|Ly86|ENSMUSG00000021423.5|lymphocyte antigen 86
mm10_v2_chr4_+_85205120_85205131	0.197255	Foxp2_Foxp3	ENSMUST00000107188.3|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2
mm10_v2_chr11_+_85353156_85353219	0.197072	Foxp2_Foxp3	ENSMUST00000108061.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108062.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108056.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000138423.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000074875.4|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000092821.3|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3
mm10_v2_chr11_-_102556122_102556199	0.19555	Foxp2_Foxp3	ENSMUST00000143842.1|Gpatch8|ENSMUSG00000034621.8|G patch domain containing 8
mm10_v2_chr13_+_76579670_76579678	0.1955	Foxp2_Foxp3	ENSMUST00000126960.1|Mctp1|ENSMUSG00000021596.10|multiple C2 domains, transmembrane 1 	ENSMUST00000109583.2|Mctp1|ENSMUSG00000021596.10|multiple C2 domains, transmembrane 1
mm10_v2_chr2_+_68117713_68117713	0.195215	Foxp2_Foxp3	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr16_+_44394771_44394804	0.193386	Foxp2_Foxp3	ENSMUST00000099742.2|Wdr52|ENSMUSG00000071550.7|WD repeat domain 52
mm10_v2_chr6_+_104492790_104492965	0.192272	Foxp2_Foxp3	ENSMUST00000161446.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000161070.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000089215.5|Cntn6|ENSMUSG00000030092.8|contactin 6
mm10_v2_chrX_+_94234982_94234997	0.192262	Foxp2_Foxp3	ENSMUST00000096369.3|Klhl15|ENSMUSG00000043929.10|kelch-like 15 	ENSMUST00000113911.2|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr10_-_82690608_82690650	0.189584	Foxp2_Foxp3	ENSMUST00000065815.6|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2 	ENSMUST00000020485.3|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2
mm10_v2_chr4_-_45012287_45012412	0.188705	Foxp2_Foxp3	ENSMUST00000055028.8|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5 	ENSMUST00000180217.1|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5 	ENSMUST00000107817.2|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5
mm10_v2_chr10_+_69925954_69926133	0.185988	Foxp2_Foxp3	ENSMUST00000181974.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182795.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182437.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr6_-_106800051_106800095	0.185587	Foxp2_Foxp3	ENSMUST00000013882.7|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000049675.4|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000113239.3|Crbn|ENSMUSG00000005362.8|cereblon
mm10_v2_chr5_-_38491948_38491961	0.18543	Foxp2_Foxp3	ENSMUST00000129099.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chr11_+_118433826_118433863	0.184118	Foxp2_Foxp3	ENSMUST00000106286.1|C1qtnf1|ENSMUSG00000017446.8|C1q and tumor necrosis factor related protein 1
mm10_v2_chr4_+_133130505_133130590	0.183733	Foxp2_Foxp3	ENSMUST00000084241.5|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2 	ENSMUST00000138831.1|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2
mm10_v2_chr17_-_51810866_51810919	0.183711	Foxp2_Foxp3	ENSMUST00000176669.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr2_-_35432552_35432633	0.183485	Foxp2_Foxp3	ENSMUST00000079424.4|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3
mm10_v2_chr1_-_64121389_64121452	0.182446	Foxp2_Foxp3	ENSMUST00000055001.3|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr13_-_51701041_51701041	0.181742	Foxp2_Foxp3	ENSMUST00000110042.1|Gm15440|ENSMUSG00000051107.4|predicted gene 15440
mm10_v2_chr7_+_30291941_30291968	0.180828	Foxp2_Foxp3	ENSMUST00000144508.1|Clip3|ENSMUSG00000013921.8|CAP-GLY domain containing linker protein 3
mm10_v2_chr8_-_119558718_119558766	0.180418	Foxp2_Foxp3	ENSMUST00000081381.4|Mbtps1|ENSMUSG00000031835.9|membrane-bound transcription factor peptidase, site 1 	ENSMUST00000098362.3|Mbtps1|ENSMUSG00000031835.9|membrane-bound transcription factor peptidase, site 1
mm10_v2_chr11_+_114851142_114851173	0.179123	Foxp2_Foxp3	ENSMUST00000133245.1|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C 	ENSMUST00000122967.2|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C
mm10_v2_chr4_-_154160632_154160696	0.17839	Foxp2_Foxp3	ENSMUST00000105639.3|Tprgl|ENSMUSG00000029030.8|transformation related protein 63 regulated like 	ENSMUST00000030896.8|Tprgl|ENSMUSG00000029030.8|transformation related protein 63 regulated like
mm10_v2_chr2_-_175131864_175131864	0.178221	Foxp2_Foxp3	ENSMUST00000108929.2|Gm14399|ENSMUSG00000090093.2|predicted gene 14399
mm10_v2_chr1_-_179546261_179546276	0.177601	Foxp2_Foxp3	ENSMUST00000027769.5|Tfb2m|ENSMUSG00000026492.5|transcription factor B2, mitochondrial
mm10_v2_chr12_-_31950170_31950197	0.17759	Foxp2_Foxp3	ENSMUST00000176520.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr3_+_96557950_96557968	0.17728	Foxp2_Foxp3	ENSMUST00000074519.6|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein 	ENSMUST00000049093.7|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein
mm10_v2_chr7_-_29906087_29906137	0.175849	Foxp2_Foxp3	ENSMUST00000053521.8|Zfp27|ENSMUSG00000062040.8|zinc finger protein 27
mm10_v2_chr8_+_64947177_64947255	0.173195	Foxp2_Foxp3	ENSMUST00000079896.7|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192 	ENSMUST00000026595.5|Tmem192|ENSMUSG00000025521.8|transmembrane protein 192
mm10_v2_chr18_-_12121460_12121492	0.172949	Foxp2_Foxp3	ENSMUST00000055447.6|Tmem241|ENSMUSG00000049411.7|transmembrane protein 241 	ENSMUST00000050228.7|Tmem241|ENSMUSG00000049411.7|transmembrane protein 241 	ENSMUST00000092075.4|Tmem241|ENSMUSG00000049411.7|transmembrane protein 241
mm10_v2_chr1_+_60181495_60181591	0.172706	Foxp2_Foxp3	ENSMUST00000160834.1|Nbeal1|ENSMUSG00000073664.5|neurobeachin like 1
mm10_v2_chr3_+_5218589_5218614	0.172153	Foxp2_Foxp3	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr13_-_52929458_52929497	0.172124	Foxp2_Foxp3	ENSMUST00000123599.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase
mm10_v2_chr11_+_16257706_16257808	0.171734	Foxp2_Foxp3	ENSMUST00000109645.2|Vstm2a|ENSMUSG00000048834.9|V-set and transmembrane domain containing 2A 	ENSMUST00000109647.2|Vstm2a|ENSMUSG00000048834.9|V-set and transmembrane domain containing 2A
mm10_v2_chr6_-_137169710_137169732	0.169979	Foxp2_Foxp3	ENSMUST00000117919.1|Rerg|ENSMUSG00000030222.7|RAS-like, estrogen-regulated, growth-inhibitor
mm10_v2_chr2_-_172940299_172940349	0.168671	Foxp2_Foxp3	ENSMUST00000009143.7|Bmp7|ENSMUSG00000008999.7|bone morphogenetic protein 7
mm10_v2_chr2_-_114201416_114201469	0.168467	Foxp2_Foxp3	ENSMUST00000050668.3|Zfp770|ENSMUSG00000040321.3|zinc finger protein 770
mm10_v2_chr5_-_77115145_77115156	0.168082	Foxp2_Foxp3	ENSMUST00000081964.5|Hopx|ENSMUSG00000059325.8|HOP homeobox
mm10_v2_chr1_-_14310198_14310218	0.167922	Foxp2_Foxp3	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr12_-_72236692_72236724	0.16587	Foxp2_Foxp3	ENSMUST00000021497.9|Rtn1|ENSMUSG00000021087.11|reticulon 1 	ENSMUST00000137990.1|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr7_+_105375053_105375098	0.165535	Foxp2_Foxp3	ENSMUST00000106805.2|Gm5901|ENSMUSG00000078611.2|predicted gene 5901
mm10_v2_chr10_+_69534039_69534070	0.162621	Foxp2_Foxp3	ENSMUST00000182557.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr2_+_69722797_69722840	0.162051	Foxp2_Foxp3	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr10_+_62920648_62920682	0.160476	Foxp2_Foxp3	ENSMUST00000144459.1|Slc25a16|ENSMUSG00000071253.2|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm10_v2_chr6_+_88724828_88724924	0.160034	Foxp2_Foxp3	ENSMUST00000089449.2|Mgll|ENSMUSG00000033174.11|monoglyceride lipase
mm10_v2_chr1_+_57377593_57377689	0.15918	Foxp2_Foxp3	ENSMUST00000042734.2|1700066M21Rik|ENSMUSG00000038323.2|RIKEN cDNA 1700066M21 gene
mm10_v2_chr8_-_31918203_31918368	0.158336	Foxp2_Foxp3	ENSMUST00000073884.4|Nrg1|ENSMUSG00000062991.6|neuregulin 1
mm10_v2_chr11_-_107470699_107470726	0.15677	Foxp2_Foxp3	ENSMUST00000103064.3|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr3_-_144202300_144202345	0.156352	Foxp2_Foxp3	ENSMUST00000121796.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4 	ENSMUST00000121112.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr9_-_102354685_102354699	0.156178	Foxp2_Foxp3	ENSMUST00000035129.7|Ephb1|ENSMUSG00000032537.8|Eph receptor B1 	ENSMUST00000085169.5|Ephb1|ENSMUSG00000032537.8|Eph receptor B1
mm10_v2_chr7_-_142372210_142372292	0.156087	Foxp2_Foxp3	ENSMUST00000084412.5|Ifitm10|ENSMUSG00000045777.8|interferon induced transmembrane protein 10
mm10_v2_chr9_+_53850243_53850257	0.154646	Foxp2_Foxp3	ENSMUST00000048485.5|Sln|ENSMUSG00000042045.5|sarcolipin
mm10_v2_chr9_-_77347816_77347887	0.153956	Foxp2_Foxp3	ENSMUST00000184138.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184006.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000185144.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000034910.9|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr3_+_51559757_51559781	0.152701	Foxp2_Foxp3	ENSMUST00000180616.1|5031434O11Rik|ENSMUSG00000097885.1|RIKEN cDNA 5031434O11 gene
mm10_v2_chr17_-_29716969_29717028	0.152408	Foxp2_Foxp3	ENSMUST00000129091.1|Ccdc167|ENSMUSG00000024018.11|coiled-coil domain containing 167 	ENSMUST00000128751.1|Ccdc167|ENSMUSG00000024018.11|coiled-coil domain containing 167
mm10_v2_chr9_+_70656248_70656261	0.15231	Foxp2_Foxp3	ENSMUST00000098589.2|Gm10642|ENSMUSG00000074213.2|predicted gene 10642
mm10_v2_chr14_-_55116935_55116980	0.151621	Foxp2_Foxp3	ENSMUST00000022819.5|Jph4|ENSMUSG00000022208.5|junctophilin 4
mm10_v2_chr1_+_177444653_177444669	0.150774	Foxp2_Foxp3	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr2_-_104028287_104028337	0.150747	Foxp2_Foxp3	ENSMUST00000056170.3|4931422A03Rik|ENSMUSG00000046085.7|RIKEN cDNA 4931422A03 gene
mm10_v2_chr2_+_176236860_176236860	0.15057	Foxp2_Foxp3	ENSMUST00000166464.1|2210418O10Rik|ENSMUSG00000078894.3|RIKEN cDNA 2210418O10 gene
mm10_v2_chr15_+_80711292_80711340	0.15047	Foxp2_Foxp3	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr6_-_13677930_13677974	0.149284	Foxp2_Foxp3	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr18_+_31609512_31609512	0.149233	Foxp2_Foxp3	ENSMUST00000164667.1|B930094E09Rik|ENSMUSG00000092124.1|RIKEN cDNA B930094E09 gene
mm10_v2_chr3_-_106001474_106001513	0.148744	Foxp2_Foxp3	ENSMUST00000066319.6|Pifo|ENSMUSG00000010136.8|primary cilia formation
mm10_v2_chr13_-_52929640_52929681	0.148662	Foxp2_Foxp3	ENSMUST00000120535.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000119311.1|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000021913.9|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase 	ENSMUST00000110031.3|Auh|ENSMUSG00000021460.10|AU RNA binding protein/enoyl-coenzyme A hydratase
mm10_v2_chr3_-_30793549_30793595	0.147226	Foxp2_Foxp3	ENSMUST00000180833.1|4933429H19Rik|ENSMUSG00000097786.1|RIKEN cDNA 4933429H19 gene
mm10_v2_chr4_-_14621669_14621786	0.14719	Foxp2_Foxp3	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr8_-_3279606_3279622	0.146515	Foxp2_Foxp3	ENSMUST00000091291.4|Insr|ENSMUSG00000005534.9|insulin receptor
mm10_v2_chr1_+_34121250_34121288	0.146467	Foxp2_Foxp3	ENSMUST00000183006.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr2_-_170194033_170194064	0.144571	Foxp2_Foxp3	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr16_-_35769356_35769384	0.143838	Foxp2_Foxp3	ENSMUST00000023554.8|Dirc2|ENSMUSG00000022848.8|disrupted in renal carcinoma 2 (human)
mm10_v2_chr13_+_63282142_63282142	0.142432	Foxp2_Foxp3	ENSMUST00000159152.1|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr19_+_8741669_8741811	0.142119	Foxp2_Foxp3	ENSMUST00000176314.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A 	ENSMUST00000073430.7|Stx5a|ENSMUSG00000010110.11|syntaxin 5A 	ENSMUST00000175901.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr10_-_88605017_88605152	0.141801	Foxp2_Foxp3	ENSMUST00000119185.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type 	ENSMUST00000121629.1|Mybpc1|ENSMUSG00000020061.11|myosin binding protein C, slow-type
mm10_v2_chr9_+_70679016_70679116	0.141425	Foxp2_Foxp3	ENSMUST00000144537.1|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr9_+_78113275_78113346	0.141187	Foxp2_Foxp3	ENSMUST00000009972.5|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000117330.1|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000044551.7|Ick|ENSMUSG00000009828.9|intestinal cell kinase
mm10_v2_chr16_+_94425083_94425148	0.14011	Foxp2_Foxp3	ENSMUST00000141176.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr12_-_15816762_15816881	0.138308	Foxp2_Foxp3	ENSMUST00000020922.7|Trib2|ENSMUSG00000020601.7|tribbles homolog 2 (Drosophila)
mm10_v2_chrX_+_163911401_163911439	0.138144	Foxp2_Foxp3	ENSMUST00000140845.1|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chrX_-_164980310_164980375	0.137391	Foxp2_Foxp3	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr15_-_79285502_79285537	0.137366	Foxp2_Foxp3	ENSMUST00000165408.1|Baiap2l2|ENSMUSG00000018126.9|BAI1-associated protein 2-like 2
mm10_v2_chr10_+_29211637_29211649	0.137329	Foxp2_Foxp3	ENSMUST00000092627.4|9330159F19Rik|ENSMUSG00000004360.8|RIKEN cDNA 9330159F19 gene
mm10_v2_chr1_-_180245757_180245911	0.137281	Foxp2_Foxp3	ENSMUST00000111104.1|Psen2|ENSMUSG00000010609.9|presenilin 2
mm10_v2_chr10_-_53647080_53647080	0.13697	Foxp2_Foxp3	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr7_-_115824699_115824752	0.136002	Foxp2_Foxp3	ENSMUST00000169129.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr11_-_106920359_106920643	0.135358	Foxp2_Foxp3	ENSMUST00000167787.1|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2 	ENSMUST00000092517.2|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2
mm10_v2_chr11_-_106788845_106788883	0.135304	Foxp2_Foxp3	ENSMUST00000123339.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr11_+_77765588_77765643	0.135036	Foxp2_Foxp3	ENSMUST00000164315.1|Myo18a|ENSMUSG00000000631.13|myosin XVIIIA
mm10_v2_chr1_+_66468364_66468435	0.132512	Foxp2_Foxp3	ENSMUST00000061620.9|Unc80|ENSMUSG00000055567.10|unc-80 homolog (C. elegans)
mm10_v2_chr2_-_77519565_77519647	0.132116	Foxp2_Foxp3	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr18_-_37020679_37020679	0.127432	Foxp2_Foxp3	ENSMUST00000097612.2|Gm10545|ENSMUSG00000073594.2|predicted gene 10545
mm10_v2_chr13_+_16014457_16014475	0.127299	Foxp2_Foxp3	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr1_+_36511867_36511903	0.126903	Foxp2_Foxp3	ENSMUST00000001166.7|Cnnm3|ENSMUSG00000001138.7|cyclin M3 	ENSMUST00000097776.3|Cnnm3|ENSMUSG00000001138.7|cyclin M3
mm10_v2_chr1_+_156838915_156838978	0.126324	Foxp2_Foxp3	ENSMUST00000111720.1|Angptl1|ENSMUSG00000033544.6|angiopoietin-like 1
mm10_v2_chr19_-_57182293_57182315	0.125884	Foxp2_Foxp3	ENSMUST00000133369.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr11_-_110168073_110168196	0.125801	Foxp2_Foxp3	ENSMUST00000044850.3|Abca9|ENSMUSG00000041797.7|ATP-binding cassette, sub-family A (ABC1), member 9
mm10_v2_chr3_+_109573907_109573990	0.125391	Foxp2_Foxp3	ENSMUST00000106576.2|Vav3|ENSMUSG00000033721.10|vav 3 oncogene
mm10_v2_chr8_-_69887687_69887687	0.12505	Foxp2_Foxp3	ENSMUST00000057831.7|Cilp2|ENSMUSG00000044006.8|cartilage intermediate layer protein 2
mm10_v2_chr4_-_129121889_129122063	0.124563	Foxp2_Foxp3	ENSMUST00000139450.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000125931.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000116444.2|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr19_-_28011138_28011181	0.124454	Foxp2_Foxp3	ENSMUST00000174850.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr18_+_37333853_37333946	0.123333	Foxp2_Foxp3	ENSMUST00000061717.2|Pcdhb6|ENSMUSG00000051678.3|protocadherin beta 6
mm10_v2_chr18_+_65698253_65698277	0.123087	Foxp2_Foxp3	ENSMUST00000115097.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like 	ENSMUST00000117694.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like
mm10_v2_chr4_+_97777606_97777632	0.121559	Foxp2_Foxp3	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr7_-_80402743_80402762	0.12096	Foxp2_Foxp3	ENSMUST00000122232.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr12_+_38783455_38783482	0.117946	Foxp2_Foxp3	ENSMUST00000161980.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160701.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr17_+_35077080_35077155	0.117507	Foxp2_Foxp3	ENSMUST00000172959.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E
mm10_v2_chr1_+_87403705_87403726	0.117367	Foxp2_Foxp3	ENSMUST00000172736.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr4_+_148602527_148602583	0.116157	Foxp2_Foxp3	ENSMUST00000105701.2|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2 	ENSMUST00000052060.6|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2
mm10_v2_chr3_+_38886940_38886940	0.115995	Foxp2_Foxp3	ENSMUST00000061260.7|Fat4|ENSMUSG00000046743.6|FAT tumor suppressor homolog 4 (Drosophila)
mm10_v2_chr6_-_87335758_87335775	0.114972	Foxp2_Foxp3	ENSMUST00000042025.9|Antxr1|ENSMUSG00000033420.10|anthrax toxin receptor 1
mm10_v2_chr2_-_163645125_163645136	0.114503	Foxp2_Foxp3	ENSMUST00000017851.3|Serinc3|ENSMUSG00000017707.9|serine incorporator 3
mm10_v2_chr2_-_102400863_102400970	0.11424	Foxp2_Foxp3	ENSMUST00000102573.1|Trim44|ENSMUSG00000027189.10|tripartite motif-containing 44
mm10_v2_chr19_-_43674844_43674909	0.113323	Foxp2_Foxp3	ENSMUST00000046038.7|Slc25a28|ENSMUSG00000040414.7|solute carrier family 25, member 28
mm10_v2_chr14_+_31641051_31641082	0.112279	Foxp2_Foxp3	ENSMUST00000090147.6|Btd|ENSMUSG00000021900.10|biotinidase
mm10_v2_chr15_-_93519499_93519526	0.111898	Foxp2_Foxp3	ENSMUST00000109255.2|Prickle1|ENSMUSG00000036158.6|prickle homolog 1 (Drosophila)
mm10_v2_chr17_-_46680870_46680933	0.11093	Foxp2_Foxp3	ENSMUST00000165007.1|Klhdc3|ENSMUSG00000063576.5|kelch domain containing 3 	ENSMUST00000071841.5|Klhdc3|ENSMUSG00000063576.5|kelch domain containing 3
mm10_v2_chr19_-_58455903_58455914	0.11069	Foxp2_Foxp3	ENSMUST00000131877.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr5_-_31048014_31048079	0.11062	Foxp2_Foxp3	ENSMUST00000137223.1|Slc5a6|ENSMUSG00000006641.6|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm10_v2_chr5_+_25246775_25246802	0.110396	Foxp2_Foxp3	ENSMUST00000144971.1|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr12_-_86884808_86884842	0.110045	Foxp2_Foxp3	ENSMUST00000038422.6|Irf2bpl|ENSMUSG00000034168.6|interferon regulatory factor 2 binding protein-like
mm10_v2_chr3_+_7366598_7366641	0.10964	Foxp2_Foxp3	ENSMUST00000028999.6|Pkia|ENSMUSG00000027499.7|protein kinase inhibitor, alpha
mm10_v2_chr2_+_32095518_32095595	0.109437	Foxp2_Foxp3	ENSMUST00000057423.5|Ppapdc3|ENSMUSG00000051373.5|phosphatidic acid phosphatase type 2 domain containing 3
mm10_v2_chr16_-_44016387_44016436	0.108455	Foxp2_Foxp3	ENSMUST00000036174.3|Gramd1c|ENSMUSG00000036292.7|GRAM domain containing 1C
mm10_v2_chr4_-_43653542_43653557	0.108276	Foxp2_Foxp3	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr11_+_102285161_102285251	0.108224	Foxp2_Foxp3	ENSMUST00000156326.1|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr13_+_75089826_75089886	0.107694	Foxp2_Foxp3	ENSMUST00000022075.4|Pcsk1|ENSMUSG00000021587.4|proprotein convertase subtilisin/kexin type 1
mm10_v2_chr9_-_44713196_44713265	0.1066	Foxp2_Foxp3	ENSMUST00000144251.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1 	ENSMUST00000156918.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1
mm10_v2_chr14_-_52213379_52213379	0.105146	Foxp2_Foxp3	ENSMUST00000140603.1|Chd8|ENSMUSG00000053754.7|chromodomain helicase DNA binding protein 8
mm10_v2_chr12_+_77238093_77238122	0.104659	Foxp2_Foxp3	ENSMUST00000177595.1|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8 	ENSMUST00000171770.2|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8
mm10_v2_chr7_-_29505447_29505473	0.102741	Foxp2_Foxp3	ENSMUST00000183096.1|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3 	ENSMUST00000085809.4|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3
mm10_v2_chr12_+_52699297_52699411	0.102511	Foxp2_Foxp3	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr11_+_70214105_70214132	0.101808	Foxp2_Foxp3	ENSMUST00000094055.3|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11 	ENSMUST00000136328.1|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11 	ENSMUST00000126296.1|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11 	ENSMUST00000153993.2|Slc16a11|ENSMUSG00000040938.10|solute carrier family 16 (monocarboxylic acid transporters), member 11
mm10_v2_chr11_-_106789157_106789192	0.0981464	Foxp2_Foxp3	ENSMUST00000129585.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr4_-_143299463_143299482	0.0974001	Foxp2_Foxp3	ENSMUST00000119654.1|Pdpn|ENSMUSG00000028583.8|podoplanin
mm10_v2_chr14_-_70207637_70207675	0.0972315	Foxp2_Foxp3	ENSMUST00000022682.5|Sorbs3|ENSMUSG00000022091.5|sorbin and SH3 domain containing 3
mm10_v2_chr14_-_31640878_31640980	0.0971115	Foxp2_Foxp3	ENSMUST00000167066.1|Hacl1|ENSMUSG00000021884.11|2-hydroxyacyl-CoA lyase 1 	ENSMUST00000127204.2|Hacl1|ENSMUSG00000021884.11|2-hydroxyacyl-CoA lyase 1 	ENSMUST00000022437.8|Hacl1|ENSMUSG00000021884.11|2-hydroxyacyl-CoA lyase 1
mm10_v2_chr4_+_43384332_43384350	0.0966834	Foxp2_Foxp3	ENSMUST00000136360.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr9_-_71896047_71896102	0.0961766	Foxp2_Foxp3	ENSMUST00000184448.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr1_+_75549581_75549626	0.0960773	Foxp2_Foxp3	ENSMUST00000154101.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr16_-_91069142_91069159	0.0955158	Foxp2_Foxp3	ENSMUST00000035689.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene 	ENSMUST00000114076.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene
mm10_v2_chrX_-_164980279_164980309	0.0945285	Foxp2_Foxp3	ENSMUST00000112247.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr2_+_32151074_32151262	0.0945159	Foxp2_Foxp3	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr6_-_136875794_136875811	0.0931939	Foxp2_Foxp3	ENSMUST00000032342.1|Mgp|ENSMUSG00000030218.1|matrix Gla protein
mm10_v2_chr10_+_62920630_62920646	0.0918958	Foxp2_Foxp3	ENSMUST00000044977.3|Slc25a16|ENSMUSG00000071253.2|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm10_v2_chr10_-_5069044_5069079	0.0914409	Foxp2_Foxp3	ENSMUST00000095899.3|Syne1|ENSMUSG00000019769.10|spectrin repeat containing, nuclear envelope 1
mm10_v2_chr1_+_132506230_132506259	0.0911253	Foxp2_Foxp3	ENSMUST00000058167.1|Tmem81|ENSMUSG00000048174.1|transmembrane protein 81
mm10_v2_chr1_-_120120138_120120194	0.0898141	Foxp2_Foxp3	ENSMUST00000112648.1|Dbi|ENSMUSG00000026385.10|diazepam binding inhibitor 	ENSMUST00000128408.1|Dbi|ENSMUSG00000026385.10|diazepam binding inhibitor
mm10_v2_chr11_+_102836296_102836458	0.0875092	Foxp2_Foxp3	ENSMUST00000021302.8|Higd1b|ENSMUSG00000020928.8|HIG1 domain family, member 1B 	ENSMUST00000107072.1|Higd1b|ENSMUSG00000020928.8|HIG1 domain family, member 1B
mm10_v2_chr2_+_91730127_91730225	0.0870908	Foxp2_Foxp3	ENSMUST00000099712.3|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111317.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111316.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000045705.7|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1
mm10_v2_chr14_-_41008256_41008275	0.0870585	Foxp2_Foxp3	ENSMUST00000136661.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chr1_-_180245927_180245955	0.086616	Foxp2_Foxp3	ENSMUST00000010753.7|Psen2|ENSMUSG00000010609.9|presenilin 2
mm10_v2_chr2_-_45110336_45110487	0.0858323	Foxp2_Foxp3	ENSMUST00000028229.6|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2 	ENSMUST00000152232.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr2_-_72986716_72986716	0.0832605	Foxp2_Foxp3	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr11_-_100397740_100397792	0.0829161	Foxp2_Foxp3	ENSMUST00000001592.8|Jup|ENSMUSG00000001552.8|junction plakoglobin 	ENSMUST00000107403.1|Jup|ENSMUSG00000001552.8|junction plakoglobin
mm10_v2_chr5_+_65131184_65131231	0.0821225	Foxp2_Foxp3	ENSMUST00000031089.5|Klhl5|ENSMUSG00000054920.6|kelch-like 5 	ENSMUST00000101191.3|Klhl5|ENSMUSG00000054920.6|kelch-like 5
mm10_v2_chr6_-_86765807_86765834	0.0796535	Foxp2_Foxp3	ENSMUST00000123732.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr10_-_117282262_117282280	0.0794539	Foxp2_Foxp3	ENSMUST00000092163.7|Lyz2|ENSMUSG00000069516.7|lysozyme 2
mm10_v2_chr2_+_167538192_167538210	0.0778522	Foxp2_Foxp3	ENSMUST00000052631.7|Snai1|ENSMUSG00000042821.7|snail homolog 1 (Drosophila)
mm10_v2_chr11_-_50210765_50210827	0.0777972	Foxp2_Foxp3	ENSMUST00000143379.1|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000015981.5|Sqstm1|ENSMUSG00000015837.9|sequestosome 1 	ENSMUST00000102774.4|Sqstm1|ENSMUSG00000015837.9|sequestosome 1
mm10_v2_chr11_+_11115784_11115851	0.0765373	Foxp2_Foxp3	ENSMUST00000056344.4|Vwc2|ENSMUSG00000050830.11|von Willebrand factor C domain containing 2
mm10_v2_chr11_-_88718078_88718104	0.0764756	Foxp2_Foxp3	ENSMUST00000092794.5|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr17_+_71204647_71204693	0.0764403	Foxp2_Foxp3	ENSMUST00000126681.1|Lpin2|ENSMUSG00000024052.11|lipin 2
mm10_v2_chr1_+_10056922_10056926	0.0755492	Foxp2_Foxp3	ENSMUST00000149214.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1
mm10_v2_chr13_-_103920295_103920367	0.0755398	Foxp2_Foxp3	ENSMUST00000169083.1|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein
mm10_v2_chr8_+_23669653_23669671	0.075277	Foxp2_Foxp3	ENSMUST00000042352.4|Zmat4|ENSMUSG00000037492.9|zinc finger, matrin type 4
mm10_v2_chr18_-_66022580_66022600	0.0750697	Foxp2_Foxp3	ENSMUST00000143990.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr14_+_78849171_78849220	0.0746673	Foxp2_Foxp3	ENSMUST00000040990.5|Vwa8|ENSMUSG00000058997.7|von Willebrand factor A domain containing 8
mm10_v2_chr2_+_164486856_164486898	0.0735584	Foxp2_Foxp3	ENSMUST00000109349.2|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm10_v2_chr16_+_43364145_43364204	0.0724824	Foxp2_Foxp3	ENSMUST00000148775.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr11_+_107547925_107547968	0.0723833	Foxp2_Foxp3	ENSMUST00000100305.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000075012.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000106746.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain
mm10_v2_chr3_+_90254163_90254252	0.0715943	Foxp2_Foxp3	ENSMUST00000029545.8|Crtc2|ENSMUSG00000027936.12|CREB regulated transcription coactivator 2
mm10_v2_chr7_+_44849581_44849629	0.0711845	Foxp2_Foxp3	ENSMUST00000150335.1|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich) 	ENSMUST00000107882.1|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr19_-_42086338_42086375	0.0711793	Foxp2_Foxp3	ENSMUST00000051772.8|Morn4|ENSMUSG00000049670.8|MORN repeat containing 4
mm10_v2_chr12_+_52516077_52516077	0.071166	Foxp2_Foxp3	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr10_+_116177351_116177417	0.071108	Foxp2_Foxp3	ENSMUST00000155606.1|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R 	ENSMUST00000128399.1|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr6_+_17491216_17491242	0.0701403	Foxp2_Foxp3	ENSMUST00000080469.5|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr1_-_175688353_175688353	0.0694576	Foxp2_Foxp3	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr13_+_72632597_72632625	0.0691244	Foxp2_Foxp3	ENSMUST00000172353.1|Irx2|ENSMUSG00000001504.9|Iroquois related homeobox 2 (Drosophila)
mm10_v2_chr7_+_75455534_75455629	0.0682116	Foxp2_Foxp3	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr11_+_43433720_43433783	0.067578	Foxp2_Foxp3	ENSMUST00000126128.1|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae) 	ENSMUST00000151880.1|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae) 	ENSMUST00000020681.3|Slu7|ENSMUSG00000020409.4|SLU7 splicing factor homolog (S. cerevisiae)
mm10_v2_chr19_+_8741473_8741503	0.0671136	Foxp2_Foxp3	ENSMUST00000177373.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A 	ENSMUST00000010254.9|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr15_-_50890396_50890463	0.0669677	Foxp2_Foxp3	ENSMUST00000185183.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr16_-_50432340_50432409	0.0665433	Foxp2_Foxp3	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr4_-_43653560_43653594	0.064522	Foxp2_Foxp3	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr2_-_176917518_176917518	0.0631286	Foxp2_Foxp3	ENSMUST00000108931.2|Gm14296|ENSMUSG00000074527.5|predicted gene 14296
mm10_v2_chr10_+_90071095_90071117	0.062732	Foxp2_Foxp3	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr1_-_45503282_45503282	0.0620047	Foxp2_Foxp3	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr6_+_116650674_116650690	0.0619312	Foxp2_Foxp3	ENSMUST00000067354.5|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene 	ENSMUST00000178241.1|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene
mm10_v2_chrX_+_7909542_7909542	0.0612895	Foxp2_Foxp3	ENSMUST00000086274.2|Gm10490|ENSMUSG00000073290.1|predicted gene 10490
mm10_v2_chr12_-_84400929_84400946	0.0606188	Foxp2_Foxp3	ENSMUST00000122194.1|Entpd5|ENSMUSG00000021236.10|ectonucleoside triphosphate diphosphohydrolase 5
mm10_v2_chr16_-_89508313_89508327	0.0601495	Foxp2_Foxp3	ENSMUST00000056118.2|Krtap7-1|ENSMUSG00000056706.2|keratin associated protein 7-1
mm10_v2_chr5_+_48242549_48242549	0.0600111	Foxp2_Foxp3	ENSMUST00000172493.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila)
mm10_v2_chr14_-_55106547_55106594	0.0597953	Foxp2_Foxp3	ENSMUST00000036041.8|Ap1g2|ENSMUSG00000040701.9|adaptor protein complex AP-1, gamma 2 subunit
mm10_v2_chr11_-_120990871_120991037	0.0595988	Foxp2_Foxp3	ENSMUST00000154483.1|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr5_-_5420244_5420312	0.0591533	Foxp2_Foxp3	ENSMUST00000167567.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr11_+_32000452_32000470	0.0584295	Foxp2_Foxp3	ENSMUST00000020537.2|Nsg2|ENSMUSG00000020297.4|neuron specific gene family member 2 	ENSMUST00000109409.1|Nsg2|ENSMUSG00000020297.4|neuron specific gene family member 2
mm10_v2_chr11_+_106789235_106789335	0.0578686	Foxp2_Foxp3	ENSMUST00000103068.3|Cep95|ENSMUSG00000018372.7|centrosomal protein 95 	ENSMUST00000018516.4|Cep95|ENSMUSG00000018372.7|centrosomal protein 95
mm10_v2_chr10_+_127677064_127677099	0.0578515	Foxp2_Foxp3	ENSMUST00000118612.1|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194 	ENSMUST00000048099.4|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194
mm10_v2_chr1_-_54926311_54926402	0.0577084	Foxp2_Foxp3	ENSMUST00000179030.1|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44 	ENSMUST00000044359.9|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44
mm10_v2_chrX_+_36328353_36328418	0.0571867	Foxp2_Foxp3	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr15_-_53346118_53346169	0.0567511	Foxp2_Foxp3	ENSMUST00000077273.2|Ext1|ENSMUSG00000061731.3|exostoses (multiple) 1
mm10_v2_chr19_+_42090422_42090502	0.0563856	Foxp2_Foxp3	ENSMUST00000066778.4|Pi4k2a|ENSMUSG00000025178.8|phosphatidylinositol 4-kinase type 2 alpha
mm10_v2_chr2_+_31974427_31974448	0.0557018	Foxp2_Foxp3	ENSMUST00000065398.6|Nup214|ENSMUSG00000001855.9|nucleoporin 214
mm10_v2_chr8_-_121944886_121944908	0.0551756	Foxp2_Foxp3	ENSMUST00000057653.7|Car5a|ENSMUSG00000025317.7|carbonic anhydrase 5a, mitochondrial
mm10_v2_chr12_-_84400851_84400900	0.0550309	Foxp2_Foxp3	ENSMUST00000117286.1|Entpd5|ENSMUSG00000021236.10|ectonucleoside triphosphate diphosphohydrolase 5
mm10_v2_chr1_-_64121456_64121491	0.0547556	Foxp2_Foxp3	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chrM_+_11734_11757	0.053568	Foxp2_Foxp3	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr2_+_69723071_69723093	0.053544	Foxp2_Foxp3	ENSMUST00000040915.8|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr19_-_58455161_58455324	0.0530867	Foxp2_Foxp3	ENSMUST00000135730.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1 	ENSMUST00000152507.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr4_+_11123950_11123980	0.0523433	Foxp2_Foxp3	ENSMUST00000142297.1|Gm11827|ENSMUSG00000086765.1|predicted gene 11827
mm10_v2_chr3_-_152193803_152193831	0.0518775	Foxp2_Foxp3	ENSMUST00000050073.6|Dnajb4|ENSMUSG00000028035.7|DnaJ (Hsp40) homolog, subfamily B, member 4
mm10_v2_chr11_-_54956047_54956122	0.0512902	Foxp2_Foxp3	ENSMUST00000155316.1|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1 	ENSMUST00000108889.3|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1 	ENSMUST00000126703.1|Tnip1|ENSMUSG00000020400.11|TNFAIP3 interacting protein 1
mm10_v2_chr1_+_66364623_66364663	0.0503853	Foxp2_Foxp3	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr9_-_103230262_103230307	0.0492642	Foxp2_Foxp3	ENSMUST00000165296.1|Trf|ENSMUSG00000032554.9|transferrin 	ENSMUST00000112645.1|Trf|ENSMUSG00000032554.9|transferrin 	ENSMUST00000166836.1|Gm20425|ENSMUSG00000090639.1|predicted gene 20425
mm10_v2_chr13_-_29984219_29984353	0.0488373	Foxp2_Foxp3	ENSMUST00000146092.1|E2f3|ENSMUSG00000016477.11|E2F transcription factor 3
mm10_v2_chr6_-_86765866_86765921	0.0483861	Foxp2_Foxp3	ENSMUST00000113675.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr7_-_37772868_37772891	0.0476784	Foxp2_Foxp3	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr2_-_73453918_73453979	0.0457418	Foxp2_Foxp3	ENSMUST00000102679.1|Wipf1|ENSMUSG00000075284.4|WAS/WASL interacting protein family, member 1
mm10_v2_chr2_-_15049254_15049339	0.0454982	Foxp2_Foxp3	ENSMUST00000028034.8|Nsun6|ENSMUSG00000026707.9|NOL1/NOP2/Sun domain family member 6 	ENSMUST00000114713.1|Nsun6|ENSMUSG00000026707.9|NOL1/NOP2/Sun domain family member 6
mm10_v2_chr14_+_55561060_55561071	0.0438713	Foxp2_Foxp3	ENSMUST00000117701.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr8_+_25911670_25911692	0.0437779	Foxp2_Foxp3	ENSMUST00000120653.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1 	ENSMUST00000126226.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1
mm10_v2_chr4_+_19605451_19605451	0.0429249	Foxp2_Foxp3	ENSMUST00000108250.2|Gm12353|ENSMUSG00000078772.2|predicted gene 12353
mm10_v2_chr6_+_21985903_21985972	0.0427001	Foxp2_Foxp3	ENSMUST00000137437.1|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1 	ENSMUST00000115383.2|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1
mm10_v2_chr16_+_33518278_33518340	0.0420017	Foxp2_Foxp3	ENSMUST00000122427.1|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8 	ENSMUST00000059056.8|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8
mm10_v2_chr5_-_142817387_142817420	0.0419718	Foxp2_Foxp3	ENSMUST00000036253.6|Tnrc18|ENSMUSG00000039477.10|trinucleotide repeat containing 18
mm10_v2_chr17_-_53463315_53463340	0.0417662	Foxp2_Foxp3	ENSMUST00000024725.4|Efhb|ENSMUSG00000023931.4|EF hand domain family, member B
mm10_v2_chr6_-_108185552_108185587	0.0414046	Foxp2_Foxp3	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr15_-_101850778_101850792	0.0413918	Foxp2_Foxp3	ENSMUST00000023790.3|Krt1|ENSMUSG00000046834.6|keratin 1
mm10_v2_chr6_-_29609811_29609887	0.041359	Foxp2_Foxp3	ENSMUST00000012679.8|Tnpo3|ENSMUSG00000012535.8|transportin 3
mm10_v2_chr11_+_85311232_85311286	0.0409911	Foxp2_Foxp3	ENSMUST00000020835.9|Ppm1d|ENSMUSG00000020525.11|protein phosphatase 1D magnesium-dependent, delta isoform
mm10_v2_chr1_-_54194048_54194048	0.0406893	Foxp2_Foxp3	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr19_+_8741413_8741461	0.0400565	Foxp2_Foxp3	ENSMUST00000176381.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr3_-_144205165_144205220	0.0398037	Foxp2_Foxp3	ENSMUST00000120539.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr7_+_44849216_44849295	0.0395116	Foxp2_Foxp3	ENSMUST00000054343.8|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr17_+_71673255_71673271	0.0393221	Foxp2_Foxp3	ENSMUST00000097284.3|Fam179a|ENSMUSG00000045761.9|family with sequence similarity 179, member A
mm10_v2_chr12_+_38783503_38783527	0.0389651	Foxp2_Foxp3	ENSMUST00000159334.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_+_55155104_55155104	0.0387148	Foxp2_Foxp3	ENSMUST00000110708.2|Srp54b|ENSMUSG00000079108.4|signal recognition particle 54B
mm10_v2_chr1_+_87404916_87404964	0.0371655	Foxp2_Foxp3	ENSMUST00000173152.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2 	ENSMUST00000173663.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr4_-_143299498_143299564	0.03644	Foxp2_Foxp3	ENSMUST00000030317.7|Pdpn|ENSMUSG00000028583.8|podoplanin
mm10_v2_chr16_-_34263179_34263208	0.0360109	Foxp2_Foxp3	ENSMUST00000114949.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114954.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr7_+_126776939_126777213	0.0358936	Foxp2_Foxp3	ENSMUST00000038614.5|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000170882.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106359.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106357.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000145762.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000132643.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106356.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila)
mm10_v2_chr18_-_6135888_6135999	0.0358138	Foxp2_Foxp3	ENSMUST00000182383.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000062584.7|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000077128.6|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000182038.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000182213.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12
mm10_v2_chr4_-_148500449_148500466	0.0352807	Foxp2_Foxp3	ENSMUST00000030840.3|Angptl7|ENSMUSG00000028989.3|angiopoietin-like 7
mm10_v2_chr10_-_26373956_26374088	0.0349303	Foxp2_Foxp3	ENSMUST00000105519.3|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila) 	ENSMUST00000040219.6|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila)
mm10_v2_chr5_+_14025305_14025327	0.0345632	Foxp2_Foxp3	ENSMUST00000073957.6|Sema3e|ENSMUSG00000063531.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
mm10_v2_chr4_-_11981265_11981265	0.0331836	Foxp2_Foxp3	ENSMUST00000098260.2|Gm10604|ENSMUSG00000073995.2|predicted gene 10604
mm10_v2_chr9_+_44398176_44398176	0.0330841	Foxp2_Foxp3	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr9_+_57148180_57148180	0.0329539	Foxp2_Foxp3	ENSMUST00000105102.2|Gm16493|ENSMUSG00000078306.2|predicted gene 16493
mm10_v2_chr17_+_34032071_34032196	0.0314268	Foxp2_Foxp3	ENSMUST00000174299.1|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta 	ENSMUST00000173554.1|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta
mm10_v2_chr5_-_31047998_31048009	0.0310825	Foxp2_Foxp3	ENSMUST00000114665.1|Slc5a6|ENSMUSG00000006641.6|solute carrier family 5 (sodium-dependent vitamin transporter), member 6 	ENSMUST00000006817.4|Slc5a6|ENSMUSG00000006641.6|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm10_v2_chrX_-_44790179_44790210	0.0309368	Foxp2_Foxp3	ENSMUST00000060481.2|Dcaf12l1|ENSMUSG00000045284.3|DDB1 and CUL4 associated factor 12-like 1
mm10_v2_chr12_+_3365108_3365142	0.0297831	Foxp2_Foxp3	ENSMUST00000020999.5|Kif3c|ENSMUSG00000020668.9|kinesin family member 3C
mm10_v2_chr13_-_76018524_76018712	0.0278346	Foxp2_Foxp3	ENSMUST00000050997.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing 	ENSMUST00000179078.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing 	ENSMUST00000167271.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing
mm10_v2_chr9_+_13765970_13766043	0.0265006	Foxp2_Foxp3	ENSMUST00000152532.1|Mtmr2|ENSMUSG00000031918.10|myotubularin related protein 2
mm10_v2_chr11_-_106788486_106788532	0.0264064	Foxp2_Foxp3	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr4_+_136357423_136357541	0.0256036	Foxp2_Foxp3	ENSMUST00000182167.1|Gm17388|ENSMUSG00000097588.2|predicted gene, 17388
mm10_v2_chr7_-_65371210_65371287	0.0235059	Foxp2_Foxp3	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr4_+_43669610_43669678	0.0229206	Foxp2_Foxp3	ENSMUST00000107866.1|Tmem8b|ENSMUSG00000078716.3|transmembrane protein 8B
mm10_v2_chr2_+_164833781_164833815	0.0220605	Foxp2_Foxp3	ENSMUST00000143780.1|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chr4_-_133339283_133339334	0.0218439	Foxp2_Foxp3	ENSMUST00000043305.7|Wdtc1|ENSMUSG00000037622.8|WD and tetratricopeptide repeats 1
mm10_v2_chr1_+_57845534_57845571	0.0214397	Foxp2_Foxp3	ENSMUST00000169772.1|Spats2l|ENSMUSG00000038305.8|spermatogenesis associated, serine-rich 2-like
mm10_v2_chr11_+_98446826_98446869	0.0210383	Foxp2_Foxp3	ENSMUST00000019456.4|Grb7|ENSMUSG00000019312.4|growth factor receptor bound protein 7
mm10_v2_chr4_-_133339238_133339271	0.0185394	Foxp2_Foxp3	ENSMUST00000105906.1|Wdtc1|ENSMUSG00000037622.8|WD and tetratricopeptide repeats 1
mm10_v2_chr9_-_90270712_90270804	0.0184114	Foxp2_Foxp3	ENSMUST00000041767.7|Tbc1d2b|ENSMUSG00000037410.7|TBC1 domain family, member 2B 	ENSMUST00000144348.1|Tbc1d2b|ENSMUSG00000037410.7|TBC1 domain family, member 2B
mm10_v2_chr16_-_92400067_92400083	0.0181935	Foxp2_Foxp3	ENSMUST00000023672.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr8_+_70724064_70724078	0.0180494	Foxp2_Foxp3	ENSMUST00000034307.7|Pde4c|ENSMUSG00000031842.7|phosphodiesterase 4C, cAMP specific 	ENSMUST00000110095.2|Pde4c|ENSMUSG00000031842.7|phosphodiesterase 4C, cAMP specific
mm10_v2_chr6_+_124304646_124304671	0.0174014	Foxp2_Foxp3	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr3_+_118430299_118430368	0.0172431	Foxp2_Foxp3	ENSMUST00000180774.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871
mm10_v2_chr13_+_60602182_60602231	0.01661	Foxp2_Foxp3	ENSMUST00000044083.7|Dapk1|ENSMUSG00000021559.7|death associated protein kinase 1
mm10_v2_chr1_-_195131536_195131588	0.0157403	Foxp2_Foxp3	ENSMUST00000075451.6|Cr1l|ENSMUSG00000016481.10|complement component (3b/4b) receptor 1-like
mm10_v2_chr1_+_106171752_106171879	0.0149762	Foxp2_Foxp3	ENSMUST00000061047.6|Phlpp1|ENSMUSG00000044340.6|PH domain and leucine rich repeat protein phosphatase 1
mm10_v2_chr2_+_164833841_164833858	0.0143539	Foxp2_Foxp3	ENSMUST00000152721.1|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chr4_+_116558056_116558090	0.0135841	Foxp2_Foxp3	ENSMUST00000106475.1|Gpbp1l1|ENSMUSG00000034042.10|GC-rich promoter binding protein 1-like 1
mm10_v2_chr11_+_87737530_87737566	0.012713	Foxp2_Foxp3	ENSMUST00000093955.5|Supt4a|ENSMUSG00000020485.8|suppressor of Ty 4A
mm10_v2_chr2_+_144556306_144556334	0.0121705	Foxp2_Foxp3	ENSMUST00000155876.1|Sec23b|ENSMUSG00000027429.10|SEC23B (S. cerevisiae) 	ENSMUST00000149697.1|Sec23b|ENSMUSG00000027429.10|SEC23B (S. cerevisiae)
mm10_v2_chr7_-_44892358_44892429	0.0114232	Foxp2_Foxp3	ENSMUST00000003049.6|Med25|ENSMUSG00000002968.7|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)
mm10_v2_chr6_+_29859686_29859710	0.011327	Foxp2_Foxp3	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr5_-_103211251_103211334	0.0111906	Foxp2_Foxp3	ENSMUST00000060871.5|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112846.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000170792.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112847.2|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr5_-_5265224_5265309	0.0109811	Foxp2_Foxp3	ENSMUST00000115450.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr19_-_45783512_45783558	0.0104662	Foxp2_Foxp3	ENSMUST00000026243.3|Mgea5|ENSMUSG00000025220.7|meningioma expressed antigen 5 (hyaluronidase)
mm10_v2_chr17_+_24886643_24886765	0.00880729	Foxp2_Foxp3	ENSMUST00000117890.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000168265.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000120943.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000068508.6|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000119829.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3
mm10_v2_chr6_-_23132981_23132992	0.00862087	Foxp2_Foxp3	ENSMUST00000031707.7|Aass|ENSMUSG00000029695.7|aminoadipate-semialdehyde synthase
mm10_v2_chr15_+_79347534_79347556	0.00831016	Foxp2_Foxp3	ENSMUST00000096350.3|Maff|ENSMUSG00000042622.7|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm10_v2_chr16_-_74411292_74411430	0.00770072	Foxp2_Foxp3	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr11_-_88718223_88718294	0.00651015	Foxp2_Foxp3	ENSMUST00000107909.1|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr10_-_117292863_117292870	0.00573079	Foxp2_Foxp3	ENSMUST00000092162.5|Lyz1|ENSMUSG00000069515.5|lysozyme 1
mm10_v2_chr11_-_97150025_97150084	0.00564606	Foxp2_Foxp3	ENSMUST00000118375.1|Tbkbp1|ENSMUSG00000038517.9|TBK1 binding protein 1
mm10_v2_chr12_+_84451485_84451518	0.00543658	Foxp2_Foxp3	ENSMUST00000137170.1|Lin52|ENSMUSG00000085793.1|lin-52 homolog (C. elegans)
mm10_v2_chr7_+_44468051_44468072	0.00432139	Foxp2_Foxp3	ENSMUST00000118493.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2
mm10_v2_chr19_-_8713862_8713897	0.00422212	Foxp2_Foxp3	ENSMUST00000010239.4|Slc3a2|ENSMUSG00000010095.7|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm10_v2_chr3_+_32436376_32436376	0.00398102	Foxp2_Foxp3	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr2_+_120567687_120567738	0.0037525	Foxp2_Foxp3	ENSMUST00000028743.3|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23 	ENSMUST00000116437.1|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23 	ENSMUST00000153580.1|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23 	ENSMUST00000142278.1|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23
mm10_v2_chr7_+_127800844_127800941	0.00357606	Foxp2_Foxp3	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chrX_-_150814265_150814345	0.00314233	Foxp2_Foxp3	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr10_-_80900749_80900969	0.00304796	Foxp2_Foxp3	ENSMUST00000020440.6|Timm13|ENSMUSG00000020219.6|translocase of inner mitochondrial membrane 13
mm10_v2_chr16_+_49699198_49699304	0.00285427	Foxp2_Foxp3	ENSMUST00000046777.4|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57 	ENSMUST00000142682.1|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57
mm10_v2_chr2_-_121271315_121271322	0.00199	Foxp2_Foxp3	ENSMUST00000131245.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr4_+_114680769_114680804	0.00187905	Foxp2_Foxp3	ENSMUST00000146346.1|Gm12829|ENSMUSG00000085870.1|predicted gene 12829
mm10_v2_chr11_+_120232921_120232952	0.00175432	Foxp2_Foxp3	ENSMUST00000122148.1|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1 	ENSMUST00000044985.7|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1
mm10_v2_chr8_+_25720054_25720099	0.000753599	Foxp2_Foxp3	ENSMUST00000068916.8|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B 	ENSMUST00000139836.1|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B
mm10_v2_chr6_-_52640303_52640389	8.28846e-05	Foxp2_Foxp3	ENSMUST00000031788.8|Hibadh|ENSMUSG00000029776.10|3-hydroxyisobutyrate dehydrogenase
