mm10_v2_chr4_-_120287349_120287349	2.52507	Gli2	ENSMUST00000102656.3|Foxo6|ENSMUSG00000052135.8|forkhead box O6
mm10_v2_chr19_+_5740885_5740904	1.67265	Gli2	ENSMUST00000081496.5|Ltbp3|ENSMUSG00000024940.10|latent transforming growth factor beta binding protein 3
mm10_v2_chr10_+_93589413_93589413	1.51946	Gli2	ENSMUST00000181835.1|4933408J17Rik|ENSMUSG00000097407.1|RIKEN cDNA 4933408J17 gene
mm10_v2_chr8_+_70754679_70754751	1.32806	Gli2	ENSMUST00000110093.2|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family 	ENSMUST00000143118.1|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family 	ENSMUST00000034301.5|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family 	ENSMUST00000110090.1|Rab3a|ENSMUSG00000031840.6|RAB3A, member RAS oncogene family
mm10_v2_chr12_+_58211772_58211804	1.27497	Gli2	ENSMUST00000110671.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1 	ENSMUST00000044299.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1
mm10_v2_chr11_-_118909487_118909575	1.2397	Gli2	ENSMUST00000117731.1|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3 	ENSMUST00000106278.2|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3 	ENSMUST00000120061.1|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3 	ENSMUST00000017576.4|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3
mm10_v2_chr3_+_105452326_105452365	1.21276	Gli2	ENSMUST00000098761.3|Kcnd3|ENSMUSG00000040896.10|potassium voltage-gated channel, Shal-related family, member 3
mm10_v2_chr7_-_121035096_121035096	1.19847	Gli2	ENSMUST00000065740.2|Gm9905|ENSMUSG00000053358.2|predicted gene 9905
mm10_v2_chr1_+_55406163_55406388	1.13563	Gli2	ENSMUST00000042986.8|Plcl1|ENSMUSG00000038349.9|phospholipase C-like 1
mm10_v2_chr15_-_78718113_78718113	1.11392	Gli2	ENSMUST00000088592.4|Elfn2|ENSMUSG00000043460.6|leucine rich repeat and fibronectin type III, extracellular 2
mm10_v2_chr5_-_71095765_71095862	1.02501	Gli2	ENSMUST00000000572.5|Gabra2|ENSMUSG00000000560.5|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
mm10_v2_chr9_+_13662460_13662460	0.995569	Gli2	ENSMUST00000177755.1|Maml2|ENSMUSG00000031925.10|mastermind like 2 (Drosophila)
mm10_v2_chr3_+_107036156_107036181	0.969746	Gli2	ENSMUST00000052718.3|Kcna3|ENSMUSG00000047959.3|potassium voltage-gated channel, shaker-related subfamily, member 3
mm10_v2_chr13_-_54611274_54611297	0.874829	Gli2	ENSMUST00000049575.7|Cltb|ENSMUSG00000047547.8|clathrin, light polypeptide (Lcb)
mm10_v2_chr10_-_127263346_127263368	0.872508	Gli2	ENSMUST00000099172.3|Kif5a|ENSMUSG00000074657.4|kinesin family member 5A
mm10_v2_chr14_-_55116935_55116980	0.872096	Gli2	ENSMUST00000022819.5|Jph4|ENSMUSG00000022208.5|junctophilin 4
mm10_v2_chr3_+_127633134_127633140	0.846732	Gli2	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chr2_-_127482499_127482577	0.83953	Gli2	ENSMUST00000088538.5|Kcnip3|ENSMUSG00000079056.6|Kv channel interacting protein 3, calsenilin
mm10_v2_chr11_-_42000284_42000356	0.837181	Gli2	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr18_-_35215008_35215033	0.833848	Gli2	ENSMUST00000091636.3|Lrrtm2|ENSMUSG00000071862.2|leucine rich repeat transmembrane neuronal 2
mm10_v2_chrX_-_9662950_9663003	0.821112	Gli2	ENSMUST00000033519.2|Dynlt3|ENSMUSG00000031176.2|dynein light chain Tctex-type 3
mm10_v2_chr11_-_42000532_42000592	0.690178	Gli2	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr18_-_38250558_38250607	0.673182	Gli2	ENSMUST00000181757.1|1700086O06Rik|ENSMUSG00000097080.1|RIKEN cDNA 1700086O06 gene
mm10_v2_chr18_+_86394952_86394968	0.67187	Gli2	ENSMUST00000058829.2|Neto1|ENSMUSG00000050321.2|neuropilin (NRP) and tolloid (TLL)-like 1
mm10_v2_chr13_-_54611332_54611387	0.668418	Gli2	ENSMUST00000091609.4|Cltb|ENSMUSG00000047547.8|clathrin, light polypeptide (Lcb)
mm10_v2_chr6_+_134920401_134920434	0.668119	Gli2	ENSMUST00000067327.4|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B 	ENSMUST00000003115.6|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B
mm10_v2_chrX_+_161717498_161717627	0.626413	Gli2	ENSMUST00000061514.7|Rai2|ENSMUSG00000043518.7|retinoic acid induced 2
mm10_v2_chr5_-_53213447_53213473	0.612383	Gli2	ENSMUST00000031090.6|Sel1l3|ENSMUSG00000029189.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm10_v2_chrX_+_161717055_161717073	0.551866	Gli2	ENSMUST00000112338.1|Rai2|ENSMUSG00000043518.7|retinoic acid induced 2
mm10_v2_chr2_-_35979624_35979800	0.548513	Gli2	ENSMUST00000028248.4|Ttll11|ENSMUSG00000026885.7|tubulin tyrosine ligase-like family, member 11 	ENSMUST00000112976.2|Ttll11|ENSMUSG00000026885.7|tubulin tyrosine ligase-like family, member 11
mm10_v2_chr2_+_180499893_180499976	0.532803	Gli2	ENSMUST00000029084.2|Ntsr1|ENSMUSG00000027568.3|neurotensin receptor 1
mm10_v2_chr1_-_38664947_38665000	0.505588	Gli2	ENSMUST00000039827.7|Aff3|ENSMUSG00000037138.10|AF4/FMR2 family, member 3 	ENSMUST00000027250.7|Aff3|ENSMUSG00000037138.10|AF4/FMR2 family, member 3
mm10_v2_chr1_-_72536930_72536999	0.481013	Gli2	ENSMUST00000047786.5|March4|ENSMUSG00000039372.5|membrane-associated ring finger (C3HC4) 4
mm10_v2_chr6_+_135197977_135198023	0.478695	Gli2	ENSMUST00000111915.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene 	ENSMUST00000111916.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene
mm10_v2_chr12_-_69357120_69357181	0.462787	Gli2	ENSMUST00000021368.8|Nemf|ENSMUSG00000020982.8|nuclear export mediator factor
mm10_v2_chr19_+_6975048_6975071	0.460646	Gli2	ENSMUST00000070850.6|Ppp1r14b|ENSMUSG00000056612.6|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm10_v2_chr1_-_51915968_51916071	0.452714	Gli2	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr16_-_88056176_88056176	0.450265	Gli2	ENSMUST00000072256.5|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000023652.8|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000114137.1|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1
mm10_v2_chr11_+_70844745_70844975	0.440983	Gli2	ENSMUST00000076270.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000179114.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000100928.4|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000177731.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000108533.3|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000081362.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000178245.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1
mm10_v2_chr1_+_167001417_167001431	0.419584	Gli2	ENSMUST00000165874.1|Fam78b|ENSMUSG00000060568.8|family with sequence similarity 78, member B
mm10_v2_chr7_+_126928844_126928899	0.408908	Gli2	ENSMUST00000032924.5|Kctd13|ENSMUSG00000030685.5|potassium channel tetramerisation domain containing 13
mm10_v2_chr1_-_51915901_51915958	0.390496	Gli2	ENSMUST00000018561.7|Myo1b|ENSMUSG00000018417.8|myosin IB 	ENSMUST00000114537.2|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr5_-_100159261_100159314	0.379613	Gli2	ENSMUST00000139520.1|Tmem150c|ENSMUSG00000050640.10|transmembrane protein 150C
mm10_v2_chr18_+_61555258_61555290	0.376845	Gli2	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr11_+_75532127_75532151	0.346657	Gli2	ENSMUST00000127226.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr2_+_69861562_69861584	0.337194	Gli2	ENSMUST00000090852.4|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B 	ENSMUST00000166411.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr2_+_69861638_69861686	0.33527	Gli2	ENSMUST00000112260.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr11_+_29526423_29526474	0.327528	Gli2	ENSMUST00000136351.1|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2 	ENSMUST00000020749.6|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2 	ENSMUST00000144321.1|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2 	ENSMUST00000093239.4|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2
mm10_v2_chr2_+_49451486_49451559	0.326259	Gli2	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr8_+_85060055_85060135	0.321732	Gli2	ENSMUST00000095220.3|Fbxw9|ENSMUSG00000008167.8|F-box and WD-40 domain protein 9
mm10_v2_chrX_-_7574120_7574312	0.319057	Gli2	ENSMUST00000045924.7|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000115742.2|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000150787.1|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F
mm10_v2_chr16_+_19760902_19761054	0.317761	Gli2	ENSMUST00000119468.1|B3gnt5|ENSMUSG00000022686.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm10_v2_chr7_+_121707189_121707189	0.317547	Gli2	ENSMUST00000065310.2|1700069B07Rik|ENSMUSG00000053081.2|RIKEN cDNA 1700069B07 gene
mm10_v2_chr6_+_135198034_135198109	0.301573	Gli2	ENSMUST00000130612.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene
mm10_v2_chr4_-_19708922_19709004	0.300841	Gli2	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr2_+_121955964_121956001	0.293348	Gli2	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr9_-_58158498_58158554	0.292615	Gli2	ENSMUST00000168864.2|Islr|ENSMUSG00000037206.8|immunoglobulin superfamily containing leucine-rich repeat
mm10_v2_chr12_+_72085847_72085864	0.280205	Gli2	ENSMUST00000117449.1|Jkamp|ENSMUSG00000005078.10|JNK1/MAPK8-associated membrane protein 	ENSMUST00000057257.8|Jkamp|ENSMUSG00000005078.10|JNK1/MAPK8-associated membrane protein
mm10_v2_chr7_-_16286744_16286795	0.270348	Gli2	ENSMUST00000150528.2|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9 	ENSMUST00000118976.2|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9 	ENSMUST00000146609.2|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9
mm10_v2_chr9_+_100643605_100643626	0.268326	Gli2	ENSMUST00000041418.6|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr1_+_97770158_97770209	0.258884	Gli2	ENSMUST00000112844.3|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000112842.1|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000027571.6|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1
mm10_v2_chr2_+_71211706_71211794	0.254652	Gli2	ENSMUST00000112142.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112139.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112140.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112138.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2
mm10_v2_chr9_-_95750335_95750368	0.251062	Gli2	ENSMUST00000053785.3|Trpc1|ENSMUSG00000032839.7|transient receptor potential cation channel, subfamily C, member 1
mm10_v2_chr9_+_100643448_100643542	0.250371	Gli2	ENSMUST00000146312.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1 	ENSMUST00000129269.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr11_+_116030304_116030385	0.226829	Gli2	ENSMUST00000021116.5|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila) 	ENSMUST00000106452.1|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila)
mm10_v2_chr11_+_29526407_29526420	0.225423	Gli2	ENSMUST00000133452.1|Mtif2|ENSMUSG00000020459.8|mitochondrial translational initiation factor 2
mm10_v2_chr9_+_108795971_108795994	0.217868	Gli2	ENSMUST00000085018.4|Ip6k2|ENSMUSG00000032599.7|inositol hexaphosphate kinase 2
mm10_v2_chrX_+_137049586_137049654	0.217453	Gli2	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr4_+_103619580_103619665	0.208886	Gli2	ENSMUST00000106827.1|Dab1|ENSMUSG00000028519.10|disabled 1
mm10_v2_chr12_-_31950210_31950246	0.207945	Gli2	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chrX_+_100730178_100730189	0.207797	Gli2	ENSMUST00000113744.1|Gdpd2|ENSMUSG00000019359.8|glycerophosphodiester phosphodiesterase domain containing 2
mm10_v2_chr10_+_83543941_83544007	0.207193	Gli2	ENSMUST00000038388.5|A230046K03Rik|ENSMUSG00000034560.5|RIKEN cDNA A230046K03 gene
mm10_v2_chr7_+_81571246_81571318	0.20076	Gli2	ENSMUST00000165460.1|Whamm|ENSMUSG00000045795.9|WAS protein homolog associated with actin, golgi membranes and microtubules
mm10_v2_chr2_+_121956411_121956480	0.178142	Gli2	ENSMUST00000110578.1|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chrX_+_100729917_100729963	0.177019	Gli2	ENSMUST00000019503.7|Gdpd2|ENSMUSG00000019359.8|glycerophosphodiester phosphodiesterase domain containing 2
mm10_v2_chr19_-_43674844_43674909	0.176453	Gli2	ENSMUST00000046038.7|Slc25a28|ENSMUSG00000040414.7|solute carrier family 25, member 28
mm10_v2_chr18_+_61555308_61555345	0.168145	Gli2	ENSMUST00000165721.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000115246.2|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000166990.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000163205.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1 	ENSMUST00000170862.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr4_-_126256226_126256370	0.165853	Gli2	ENSMUST00000122129.1|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1 	ENSMUST00000061143.8|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1 	ENSMUST00000106132.2|Map7d1|ENSMUSG00000028849.11|MAP7 domain containing 1
mm10_v2_chr4_+_33310306_33310387	0.152135	Gli2	ENSMUST00000108153.2|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase 	ENSMUST00000029942.7|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase
mm10_v2_chr10_+_42502030_42502041	0.152055	Gli2	ENSMUST00000105500.1|Snx3|ENSMUSG00000019804.6|sorting nexin 3 	ENSMUST00000019939.5|Snx3|ENSMUSG00000019804.6|sorting nexin 3
mm10_v2_chr2_+_140395309_140395438	0.151316	Gli2	ENSMUST00000110067.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110064.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110063.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110062.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000078027.5|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000043836.7|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2
mm10_v2_chr4_-_121098190_121098250	0.147211	Gli2	ENSMUST00000058754.2|Zmpste24|ENSMUSG00000043207.4|zinc metallopeptidase, STE24
mm10_v2_chr11_+_95712673_95712673	0.143751	Gli2	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr9_-_107770945_107771007	0.142418	Gli2	ENSMUST00000183248.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182022.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000035199.6|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182659.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5
mm10_v2_chr7_+_12881165_12881204	0.140553	Gli2	ENSMUST00000144578.1|Zfp128|ENSMUSG00000060397.6|zinc finger protein 128
mm10_v2_chr15_+_41447438_41447482	0.136	Gli2	ENSMUST00000110297.2|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000090096.4|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr5_-_20882072_20882124	0.133855	Gli2	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr10_-_17947997_17948098	0.131027	Gli2	ENSMUST00000037879.6|Heca|ENSMUSG00000039879.8|headcase homolog (Drosophila)
mm10_v2_chr4_+_121039385_121039385	0.122322	Gli2	ENSMUST00000030372.5|Col9a2|ENSMUSG00000028626.5|collagen, type IX, alpha 2
mm10_v2_chr17_-_84187939_84187954	0.121542	Gli2	ENSMUST00000060366.6|Zfp36l2|ENSMUSG00000045817.8|zinc finger protein 36, C3H type-like 2
mm10_v2_chr7_+_35119285_35119301	0.11827	Gli2	ENSMUST00000042985.9|Cebpa|ENSMUSG00000034957.9|CCAAT/enhancer binding protein (C/EBP), alpha
mm10_v2_chr4_+_36952930_36952970	0.113899	Gli2	ENSMUST00000144029.1|Gm12371|ENSMUSG00000084898.1|predicted gene 12371
mm10_v2_chr4_+_43401232_43401293	0.111514	Gli2	ENSMUST00000125399.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr4_-_83486178_83486276	0.109773	Gli2	ENSMUST00000130626.1|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1
mm10_v2_chr4_-_59783800_59783876	0.106471	Gli2	ENSMUST00000107526.1|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein 	ENSMUST00000095063.4|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein
mm10_v2_chr5_-_148928619_148928659	0.102048	Gli2	ENSMUST00000149169.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1 	ENSMUST00000047257.8|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr19_+_27217357_27217424	0.0995041	Gli2	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr2_+_130576170_130576176	0.0979132	Gli2	ENSMUST00000028764.5|Oxt|ENSMUSG00000027301.7|oxytocin
mm10_v2_chr7_+_141328122_141328139	0.0977164	Gli2	ENSMUST00000133012.1|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80 	ENSMUST00000026578.7|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80
mm10_v2_chr4_-_83486453_83486478	0.0951028	Gli2	ENSMUST00000107214.2|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1 	ENSMUST00000107215.2|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1 	ENSMUST00000030207.8|Psip1|ENSMUSG00000028484.10|PC4 and SFRS1 interacting protein 1
mm10_v2_chr18_-_38250157_38250212	0.0932611	Gli2	ENSMUST00000181871.1|1700086O06Rik|ENSMUSG00000097080.1|RIKEN cDNA 1700086O06 gene
mm10_v2_chr7_+_141327840_141327888	0.09184	Gli2	ENSMUST00000126510.1|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80 	ENSMUST00000145184.1|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80
mm10_v2_chr10_-_99126321_99126321	0.0882636	Gli2	ENSMUST00000060761.5|Phxr2|ENSMUSG00000055108.5|per-hexamer repeat gene 2
mm10_v2_chr2_-_157566319_157566361	0.0875032	Gli2	ENSMUST00000109528.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human) 	ENSMUST00000088494.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr7_-_81454751_81454764	0.0856315	Gli2	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chrX_-_74023908_74023918	0.0761875	Gli2	ENSMUST00000033769.8|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1 	ENSMUST00000114352.1|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1 	ENSMUST00000068286.5|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1 	ENSMUST00000114360.3|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1 	ENSMUST00000114354.3|Irak1|ENSMUSG00000031392.12|interleukin-1 receptor-associated kinase 1
mm10_v2_chr7_+_30650385_30650439	0.0744661	Gli2	ENSMUST00000181529.1|Gm26610|ENSMUSG00000097674.1|predicted gene, 26610
mm10_v2_chr19_-_8880883_8880933	0.0623798	Gli2	ENSMUST00000096253.5|AI462493|ENSMUSG00000071654.5|expressed sequence AI462493
mm10_v2_chr4_-_135971894_135971929	0.0613021	Gli2	ENSMUST00000105852.1|Lypla2|ENSMUSG00000028670.8|lysophospholipase 2
mm10_v2_chr3_+_9250602_9250602	0.0600466	Gli2	ENSMUST00000155203.1|Zbtb10|ENSMUSG00000069114.8|zinc finger and BTB domain containing 10
mm10_v2_chr16_-_17132377_17132388	0.0589457	Gli2	ENSMUST00000023453.7|Sdf2l1|ENSMUSG00000022769.7|stromal cell-derived factor 2-like 1
mm10_v2_chr11_-_68871848_68871858	0.0568212	Gli2	ENSMUST00000101017.2|Ndel1|ENSMUSG00000018736.8|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm10_v2_chr12_-_31950535_31950560	0.0553423	Gli2	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr11_-_121388186_121388267	0.0508609	Gli2	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr10_+_80151154_80151375	0.0447268	Gli2	ENSMUST00000146516.1|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000144526.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr2_-_104712122_104712180	0.0418902	Gli2	ENSMUST00000111118.1|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1 	ENSMUST00000028597.3|Tcp11l1|ENSMUSG00000027175.4|t-complex 11 like 1
mm10_v2_chr19_+_27217011_27217042	0.0414252	Gli2	ENSMUST00000164746.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000172302.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr12_-_31950170_31950197	0.0413054	Gli2	ENSMUST00000176520.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr19_+_6047081_6047104	0.0399683	Gli2	ENSMUST00000025723.8|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr6_-_137649211_137649294	0.0370361	Gli2	ENSMUST00000134630.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000058210.6|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000111878.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr5_+_105519388_105519425	0.0306351	Gli2	ENSMUST00000067924.6|Lrrc8c|ENSMUSG00000054720.6|leucine rich repeat containing 8 family, member C 	ENSMUST00000150981.1|Lrrc8c|ENSMUSG00000054720.6|leucine rich repeat containing 8 family, member C
mm10_v2_chr7_-_137314394_137314445	0.0275968	Gli2	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr7_-_133123409_133123472	0.0229488	Gli2	ENSMUST00000170459.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000166400.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr2_-_37703275_37703290	0.0208596	Gli2	ENSMUST00000072186.5|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr13_+_5861489_5861501	0.0151575	Gli2	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr9_+_107576915_107576990	0.0139529	Gli2	ENSMUST00000112387.2|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1 	ENSMUST00000123005.1|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1 	ENSMUST00000010195.7|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1 	ENSMUST00000144392.1|Hyal1|ENSMUSG00000010051.9|hyaluronoglucosaminidase 1
mm10_v2_chr4_-_126968124_126968154	0.0112306	Gli2	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
