mm10_v2_chr9_+_3013140_3013140	8.28678	Hmga2	ENSMUST00000143083.2|Gm10721|ENSMUSG00000096519.1|predicted gene 10721
mm10_v2_chr14_-_19418930_19418930	8.22847	Hmga2	ENSMUST00000177817.1|Gm21738|ENSMUSG00000095280.1|predicted gene, 21738
mm10_v2_chr2_-_98667264_98667301	8.04306	Hmga2	ENSMUST00000099683.1|Gm10800|ENSMUSG00000075014.1|predicted gene 10800
mm10_v2_chr9_+_3004457_3004523	7.06886	Hmga2	ENSMUST00000178348.1|Gm11168|ENSMUSG00000096385.1|predicted gene 11168
mm10_v2_chr9_+_3023547_3023547	5.67197	Hmga2	ENSMUST00000099046.3|Gm10718|ENSMUSG00000095186.1|predicted gene 10718
mm10_v2_chr9_+_3025417_3025490	5.53663	Hmga2	ENSMUST00000075573.6|Gm10717|ENSMUSG00000095891.1|predicted gene 10717
mm10_v2_chr9_+_3018753_3018779	5.15612	Hmga2	ENSMUST00000179272.1|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr9_+_3017408_3017543	4.57731	Hmga2	ENSMUST00000099049.3|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr7_-_5413145_5413145	1.66396	Hmga2	ENSMUST00000108569.2|Vmn1r58|ENSMUSG00000078808.4|vomeronasal 1 receptor 58
mm10_v2_chr5_+_14514918_14514951	1.2398	Hmga2	ENSMUST00000030691.10|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein) 	ENSMUST00000182407.1|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein)
mm10_v2_chr13_-_62607499_62607499	1.21894	Hmga2	ENSMUST00000091563.4|6720489N17Rik|ENSMUSG00000072066.3|RIKEN cDNA 6720489N17 gene
mm10_v2_chr4_+_44756553_44756601	1.18245	Hmga2	ENSMUST00000107824.2|Zcchc7|ENSMUSG00000035649.11|zinc finger, CCHC domain containing 7
mm10_v2_chr3_+_53845086_53845086	1.09346	Hmga2	ENSMUST00000108014.1|Gm10985|ENSMUSG00000078742.1|predicted gene 10985
mm10_v2_chr1_-_144004142_144004161	0.98933	Hmga2	ENSMUST00000127206.1|Rgs2|ENSMUSG00000026360.3|regulator of G-protein signaling 2
mm10_v2_chr16_+_96361749_96361801	0.956279	Hmga2	ENSMUST00000000163.6|Igsf5|ENSMUSG00000000159.9|immunoglobulin superfamily, member 5 	ENSMUST00000081093.3|Igsf5|ENSMUSG00000000159.9|immunoglobulin superfamily, member 5 	ENSMUST00000113795.1|Igsf5|ENSMUSG00000000159.9|immunoglobulin superfamily, member 5
mm10_v2_chr1_+_172698046_172698063	0.94868	Hmga2	ENSMUST00000038495.3|Crp|ENSMUSG00000037942.4|C-reactive protein, pentraxin-related
mm10_v2_chr12_-_87233556_87233556	0.886641	Hmga2	ENSMUST00000021423.7|Noxred1|ENSMUSG00000072919.3|NADP+ dependent oxidoreductase domain containing 1
mm10_v2_chr2_-_148732457_148732467	0.881798	Hmga2	ENSMUST00000028926.6|Napb|ENSMUSG00000027438.8|N-ethylmaleimide sensitive fusion protein attachment protein beta
mm10_v2_chr13_-_62371936_62371936	0.86495	Hmga2	ENSMUST00000107989.3|Gm3604|ENSMUSG00000094942.1|predicted gene 3604
mm10_v2_chr9_+_58488568_58488603	0.841303	Hmga2	ENSMUST00000085658.4|6030419C18Rik|ENSMUSG00000066607.4|RIKEN cDNA 6030419C18 gene
mm10_v2_chr4_+_44756609_44756682	0.83209	Hmga2	ENSMUST00000143385.1|Zcchc7|ENSMUSG00000035649.11|zinc finger, CCHC domain containing 7
mm10_v2_chr12_-_23780265_23780265	0.811283	Hmga2	ENSMUST00000072014.4|Gm10330|ENSMUSG00000071362.2|predicted gene 10330
mm10_v2_chrX_+_74309089_74309161	0.767279	Hmga2	ENSMUST00000130581.1|Gdi1|ENSMUSG00000015291.4|guanosine diphosphate (GDP) dissociation inhibitor 1
mm10_v2_chr14_-_62456286_62456289	0.753582	Hmga2	ENSMUST00000165651.1|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2 	ENSMUST00000022501.3|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2
mm10_v2_chr2_+_5951440_5951469	0.704646	Hmga2	ENSMUST00000060092.6|Upf2|ENSMUSG00000043241.8|UPF2 regulator of nonsense transcripts homolog (yeast)
mm10_v2_chr16_-_36784924_36784971	0.695187	Hmga2	ENSMUST00000168279.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2 	ENSMUST00000164579.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2 	ENSMUST00000023616.2|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2
mm10_v2_chr19_-_5510467_5510518	0.679973	Hmga2	ENSMUST00000070172.4|Snx32|ENSMUSG00000056185.4|sorting nexin 32
mm10_v2_chr1_+_66386968_66386999	0.667332	Hmga2	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr5_-_106926245_106926321	0.641473	Hmga2	ENSMUST00000117588.1|Hfm1|ENSMUSG00000043410.10|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
mm10_v2_chr1_+_55131253_55131302	0.60034	Hmga2	ENSMUST00000027122.7|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr9_+_88581036_88581036	0.58571	Hmga2	ENSMUST00000164661.2|Trim43a|ENSMUSG00000090693.2|tripartite motif-containing 43A
mm10_v2_chr11_-_120086790_120086852	0.525883	Hmga2	ENSMUST00000106227.1|Azi1|ENSMUSG00000039781.8|5-azacytidine induced gene 1 	ENSMUST00000106229.1|Azi1|ENSMUSG00000039781.8|5-azacytidine induced gene 1 	ENSMUST00000180242.1|Azi1|ENSMUSG00000039781.8|5-azacytidine induced gene 1
mm10_v2_chr2_+_158375638_158375721	0.511343	Hmga2	ENSMUST00000109488.1|Snhg11|ENSMUSG00000044349.9|small nucleolar RNA host gene 11
mm10_v2_chr3_+_19187321_19187351	0.507659	Hmga2	ENSMUST00000130806.1|Mtfr1|ENSMUSG00000027601.7|mitochondrial fission regulator 1 	ENSMUST00000117529.1|Mtfr1|ENSMUSG00000027601.7|mitochondrial fission regulator 1 	ENSMUST00000119865.1|Mtfr1|ENSMUSG00000027601.7|mitochondrial fission regulator 1
mm10_v2_chr17_+_46772635_46772635	0.504272	Hmga2	ENSMUST00000071430.5|2310039H08Rik|ENSMUSG00000062619.5|RIKEN cDNA 2310039H08 gene
mm10_v2_chrM_+_10167_10167	0.494927	Hmga2	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr11_+_77462325_77462421	0.491356	Hmga2	ENSMUST00000102493.1|Coro6|ENSMUSG00000020836.9|coronin 6
mm10_v2_chr13_+_100107997_100108143	0.489288	Hmga2	ENSMUST00000142155.1|Serf1|ENSMUSG00000021643.8|small EDRK-rich factor 1 	ENSMUST00000022145.8|Serf1|ENSMUSG00000021643.8|small EDRK-rich factor 1 	ENSMUST00000132053.1|Serf1|ENSMUSG00000021643.8|small EDRK-rich factor 1
mm10_v2_chr4_+_110397661_110397708	0.48515	Hmga2	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr13_-_74482943_74482943	0.484087	Hmga2	ENSMUST00000074369.6|Zfp825|ENSMUSG00000069208.5|zinc finger protein 825
mm10_v2_chr10_+_58446845_58446928	0.476034	Hmga2	ENSMUST00000003310.5|Ranbp2|ENSMUSG00000003226.6|RAN binding protein 2
mm10_v2_chr9_-_123260776_123260803	0.473941	Hmga2	ENSMUST00000068140.4|Tmem158|ENSMUSG00000054871.4|transmembrane protein 158
mm10_v2_chr9_-_8134294_8134364	0.472618	Hmga2	ENSMUST00000037397.6|AK129341|ENSMUSG00000040729.6|cDNA sequence AK129341
mm10_v2_chr2_-_181599128_181599235	0.465413	Hmga2	ENSMUST00000060173.8|Samd10|ENSMUSG00000038605.11|sterile alpha motif domain containing 10
mm10_v2_chr2_-_80128834_80128996	0.458294	Hmga2	ENSMUST00000102654.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102655.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr11_-_84069179_84069261	0.453055	Hmga2	ENSMUST00000138208.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr16_+_87454976_87454987	0.446652	Hmga2	ENSMUST00000119504.1|Usp16|ENSMUSG00000025616.8|ubiquitin specific peptidase 16 	ENSMUST00000131356.1|Usp16|ENSMUSG00000025616.8|ubiquitin specific peptidase 16
mm10_v2_chr3_+_88214474_88214495	0.44665	Hmga2	ENSMUST00000181356.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764 	ENSMUST00000181396.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr16_-_96082513_96082573	0.444886	Hmga2	ENSMUST00000113827.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr11_+_108682602_108682639	0.433187	Hmga2	ENSMUST00000106718.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106715.1|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106724.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chrX_+_101640056_101640108	0.428818	Hmga2	ENSMUST00000119299.1|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 	ENSMUST00000044475.4|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm10_v2_chr1_-_52500679_52500679	0.422911	Hmga2	ENSMUST00000069792.7|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr13_-_32802849_32802849	0.409128	Hmga2	ENSMUST00000057911.1|D930007J09Rik|ENSMUSG00000042874.1|RIKEN cDNA D930007J09 gene
mm10_v2_chr16_-_36784784_36784825	0.396936	Hmga2	ENSMUST00000165531.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2
mm10_v2_chr4_+_103114712_103114762	0.395946	Hmga2	ENSMUST00000143417.1|Mier1|ENSMUSG00000028522.10|mesoderm induction early response 1 homolog (Xenopus laevis
mm10_v2_chr7_-_42642547_42642609	0.39459	Hmga2	ENSMUST00000098503.2|9830147E19Rik|ENSMUSG00000074158.3|RIKEN cDNA 9830147E19 gene
mm10_v2_chr13_+_74406387_74406396	0.368999	Hmga2	ENSMUST00000090860.6|Gm10116|ENSMUSG00000062382.7|predicted pseudogene 10116
mm10_v2_chr6_-_113719880_113719883	0.367583	Hmga2	ENSMUST00000064993.5|Ghrl|ENSMUSG00000064177.6|ghrelin
mm10_v2_chr10_+_90071095_90071117	0.356875	Hmga2	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr14_+_25980039_25980039	0.352511	Hmga2	ENSMUST00000173155.1|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr10_+_69787431_69787458	0.342963	Hmga2	ENSMUST00000183240.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr7_+_19508712_19508741	0.33242	Hmga2	ENSMUST00000002112.8|Trappc6a|ENSMUSG00000002043.10|trafficking protein particle complex 6A 	ENSMUST00000108455.1|Trappc6a|ENSMUSG00000002043.10|trafficking protein particle complex 6A
mm10_v2_chr7_-_12422488_12422488	0.324585	Hmga2	ENSMUST00000120220.1|Zfp551|ENSMUSG00000034071.8|zinc fingr protein 551
mm10_v2_chrX_-_164980310_164980375	0.30664	Hmga2	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr14_+_74732384_74732401	0.290547	Hmga2	ENSMUST00000176957.1|Esd|ENSMUSG00000021996.10|esterase D/formylglutathione hydrolase
mm10_v2_chrX_+_103356464_103356488	0.289452	Hmga2	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr1_+_132008285_132008316	0.288437	Hmga2	ENSMUST00000146432.1|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chr11_+_105178765_105178807	0.283198	Hmga2	ENSMUST00000106939.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chrX_-_57393020_57393040	0.276843	Hmga2	ENSMUST00000143310.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000098470.2|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome 	ENSMUST00000114726.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chrX_-_57392962_57392988	0.275364	Hmga2	ENSMUST00000114730.1|Rbmx|ENSMUSG00000031134.10|RNA binding motif protein, X chromosome
mm10_v2_chrM_+_9870_9885	0.273597	Hmga2	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chr9_+_122923050_122923099	0.265299	Hmga2	ENSMUST00000051667.7|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105 	ENSMUST00000148851.1|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105
mm10_v2_chr11_+_82035569_82035585	0.25338	Hmga2	ENSMUST00000000193.5|Ccl2|ENSMUSG00000035385.5|chemokine (C-C motif) ligand 2
mm10_v2_chr19_+_12573508_12573542	0.248141	Hmga2	ENSMUST00000025595.4|Fam111a|ENSMUSG00000024691.7|family with sequence similarity 111, member A
mm10_v2_chr17_+_66111605_66111665	0.247479	Hmga2	ENSMUST00000116556.2|Wash|ENSMUSG00000024101.8|WAS protein family homolog
mm10_v2_chr16_-_76403673_76403717	0.244904	Hmga2	ENSMUST00000052867.7|Gm9843|ENSMUSG00000050299.7|predicted gene 9843
mm10_v2_chr10_-_127030813_127030840	0.241304	Hmga2	ENSMUST00000040560.4|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr11_-_115627948_115628122	0.235457	Hmga2	ENSMUST00000154623.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000106503.3|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 	ENSMUST00000141614.1|Slc25a19|ENSMUSG00000020744.7|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm10_v2_chr6_+_21949571_21949683	0.234027	Hmga2	ENSMUST00000031680.3|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000115389.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000151473.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3
mm10_v2_chr17_+_36958623_36958641	0.228832	Hmga2	ENSMUST00000173814.1|Znrd1as|ENSMUSG00000036214.7|Znrd1 antisense
mm10_v2_chr14_+_55604550_55604579	0.225455	Hmga2	ENSMUST00000138037.1|Irf9|ENSMUSG00000002325.8|interferon regulatory factor 9
mm10_v2_chrX_+_37126777_37126795	0.224432	Hmga2	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr4_-_136835843_136835988	0.223212	Hmga2	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr2_-_30359278_30359341	0.219011	Hmga2	ENSMUST00000163668.2|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000028214.8|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000113621.3|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2
mm10_v2_chr2_+_91237110_91237146	0.215276	Hmga2	ENSMUST00000181191.1|A330069E16Rik|ENSMUSG00000097868.1|RIKEN cDNA A330069E16 gene
mm10_v2_chr7_-_84679346_84679401	0.215224	Hmga2	ENSMUST00000069537.2|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6 	ENSMUST00000178385.1|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6
mm10_v2_chr13_+_104178797_104178872	0.199666	Hmga2	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr8_-_85080652_85080673	0.18714	Hmga2	ENSMUST00000152785.1|Wdr83|ENSMUSG00000005150.10|WD repeat domain containing 83
mm10_v2_chr7_+_3617357_3617389	0.176107	Hmga2	ENSMUST00000076657.4|Ndufa3|ENSMUSG00000035674.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 	ENSMUST00000108644.1|Ndufa3|ENSMUSG00000035674.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3
mm10_v2_chr2_-_30359190_30359272	0.169628	Hmga2	ENSMUST00000100215.4|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000113620.3|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2
mm10_v2_chr17_+_36958571_36958611	0.166609	Hmga2	ENSMUST00000040177.6|Znrd1as|ENSMUSG00000036214.7|Znrd1 antisense
mm10_v2_chr6_-_100671126_100671178	0.164688	Hmga2	ENSMUST00000089245.6|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000113312.2|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000170667.1|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae)
mm10_v2_chr14_-_100149764_100149764	0.161763	Hmga2	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr8_-_84176552_84176552	0.156975	Hmga2	ENSMUST00000070102.5|Nanos3|ENSMUSG00000056155.5|nanos homolog 3 (Drosophila)
mm10_v2_chr17_+_66111529_66111581	0.14744	Hmga2	ENSMUST00000072383.6|Wash|ENSMUSG00000024101.8|WAS protein family homolog
mm10_v2_chr6_+_125039760_125039859	0.146502	Hmga2	ENSMUST00000140131.1|Ing4|ENSMUSG00000030330.9|inhibitor of growth family, member 4 	ENSMUST00000032480.7|Ing4|ENSMUSG00000030330.9|inhibitor of growth family, member 4
mm10_v2_chr11_-_3409162_3409195	0.143493	Hmga2	ENSMUST00000101638.3|Limk2|ENSMUSG00000020451.11|LIM motif-containing protein kinase 2
mm10_v2_chr2_+_29124106_29124181	0.137843	Hmga2	ENSMUST00000129544.1|Setx|ENSMUSG00000043535.7|senataxin
mm10_v2_chr13_+_21722057_21722098	0.137238	Hmga2	ENSMUST00000110476.3|Hist1h2bm|ENSMUSG00000096807.1|histone cluster 1, H2bm
mm10_v2_chr1_+_74588347_74588383	0.135909	Hmga2	ENSMUST00000113732.1|Bcs1l|ENSMUSG00000026172.6|BCS1-like (yeast)
mm10_v2_chr9_+_92309362_92309386	0.130615	Hmga2	ENSMUST00000098477.1|1700057G04Rik|ENSMUSG00000074139.2|RIKEN cDNA 1700057G04 gene 	ENSMUST00000150594.1|1700057G04Rik|ENSMUSG00000074139.2|RIKEN cDNA 1700057G04 gene
mm10_v2_chr2_+_19344317_19344326	0.129618	Hmga2	ENSMUST00000141289.1|4930447M23Rik|ENSMUSG00000087674.1|RIKEN cDNA 4930447M23 gene
mm10_v2_chr7_+_92561141_92561210	0.12831	Hmga2	ENSMUST00000032842.6|Ccdc90b|ENSMUSG00000030613.7|coiled-coil domain containing 90B 	ENSMUST00000085017.4|Ccdc90b|ENSMUSG00000030613.7|coiled-coil domain containing 90B
mm10_v2_chr17_-_74459096_74459127	0.126126	Hmga2	ENSMUST00000052124.7|Nlrc4|ENSMUSG00000039193.7|NLR family, CARD domain containing 4
mm10_v2_chr7_-_10495322_10495401	0.11578	Hmga2	ENSMUST00000032551.7|Zik1|ENSMUSG00000030393.8|zinc finger protein interacting with K protein 1
mm10_v2_chr14_-_50924626_50924896	0.100359	Hmga2	ENSMUST00000160375.1|Osgep|ENSMUSG00000006289.8|O-sialoglycoprotein endopeptidase 	ENSMUST00000162177.1|Osgep|ENSMUSG00000006289.8|O-sialoglycoprotein endopeptidase 	ENSMUST00000159292.1|Osgep|ENSMUSG00000006289.8|O-sialoglycoprotein endopeptidase
mm10_v2_chr1_-_24612700_24612700	0.0993243	Hmga2	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
mm10_v2_chr5_-_114858682_114858682	0.0978442	Hmga2	ENSMUST00000066959.4|Gm9936|ENSMUSG00000054123.4|predicted gene 9936
mm10_v2_chr9_+_70012540_70012595	0.0964711	Hmga2	ENSMUST00000118198.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119905.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119413.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000140305.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000122087.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2
mm10_v2_chr16_-_17201490_17201507	0.0880135	Hmga2	ENSMUST00000090192.5|Ube2l3|ENSMUSG00000038965.9|ubiquitin-conjugating enzyme E2L 3 	ENSMUST00000115700.1|Ube2l3|ENSMUSG00000038965.9|ubiquitin-conjugating enzyme E2L 3
mm10_v2_chr11_-_116306696_116306750	0.0822522	Hmga2	ENSMUST00000133468.1|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7 	ENSMUST00000106411.3|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7 	ENSMUST00000106413.3|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7 	ENSMUST00000021147.7|Exoc7|ENSMUSG00000020792.9|exocyst complex component 7
mm10_v2_chr10_+_123264076_123264125	0.07975	Hmga2	ENSMUST00000050756.7|Fam19a2|ENSMUSG00000044071.7|family with sequence similarity 19, member A2
mm10_v2_chr4_-_58912678_58912776	0.0780406	Hmga2	ENSMUST00000144512.1|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180 	ENSMUST00000102889.3|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180 	ENSMUST00000055822.8|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180
mm10_v2_chr1_+_46066738_46066844	0.0698161	Hmga2	ENSMUST00000069293.7|Dnah7b|ENSMUSG00000041144.9|dynein, axonemal, heavy chain 7B
mm10_v2_chr9_+_75037838_75037917	0.0510129	Hmga2	ENSMUST00000169188.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr16_+_32277449_32277462	0.0488948	Hmga2	ENSMUST00000155649.1|Rnf168|ENSMUSG00000014074.11|ring finger protein 168 	ENSMUST00000014218.8|Rnf168|ENSMUSG00000014074.11|ring finger protein 168 	ENSMUST00000171474.1|Rnf168|ENSMUSG00000014074.11|ring finger protein 168
mm10_v2_chrX_+_152178945_152178964	0.0450585	Hmga2	ENSMUST00000096275.4|Iqsec2|ENSMUSG00000041115.10|IQ motif and Sec7 domain 2
mm10_v2_chr7_-_133015248_133015329	0.0437277	Hmga2	ENSMUST00000169570.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr7_+_49975228_49975340	0.0406593	Hmga2	ENSMUST00000107603.1|Nell1|ENSMUSG00000055409.7|NEL-like 1
mm10_v2_chr1_-_74588117_74588145	0.0386609	Hmga2	ENSMUST00000066986.6|Zfp142|ENSMUSG00000026135.11|zinc finger protein 142
mm10_v2_chr12_-_31654767_31654840	0.037478	Hmga2	ENSMUST00000020977.2|Dus4l|ENSMUSG00000020648.2|dihydrouridine synthase 4-like (S. cerevisiae)
mm10_v2_chr18_+_37411674_37411674	0.0368863	Hmga2	ENSMUST00000051126.2|Pcdhb10|ENSMUSG00000045657.2|protocadherin beta 10
mm10_v2_chr7_+_16738410_16738476	0.0363698	Hmga2	ENSMUST00000086112.6|Ap2s1|ENSMUSG00000008036.10|adaptor-related protein complex 2, sigma 1 subunit
mm10_v2_chr7_-_3111950_3111950	0.0280587	Hmga2	ENSMUST00000069044.5|Gm7353|ENSMUSG00000055452.5|predicted pseudogene 7353
mm10_v2_chr5_+_31494736_31494778	0.0279579	Hmga2	ENSMUST00000076949.6|Gpn1|ENSMUSG00000064037.7|GPN-loop GTPase 1 	ENSMUST00000117700.1|Gpn1|ENSMUSG00000064037.7|GPN-loop GTPase 1
mm10_v2_chr17_-_6961156_6961156	0.0232209	Hmga2	ENSMUST00000063683.6|Tagap1|ENSMUSG00000052031.7|T cell activation GTPase activating protein 1
mm10_v2_chr11_+_22971991_22972070	0.0213909	Hmga2	ENSMUST00000049506.5|Zrsr1|ENSMUSG00000044068.5|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1
mm10_v2_chr3_+_85574109_85574148	0.0187727	Hmga2	ENSMUST00000127348.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107672.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107674.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae)
mm10_v2_chr7_-_45526146_45526268	0.0186781	Hmga2	ENSMUST00000167273.1|Ppp1r15a|ENSMUSG00000040435.10|protein phosphatase 1, regulatory (inhibitor) subunit 15A 	ENSMUST00000042105.8|Ppp1r15a|ENSMUSG00000040435.10|protein phosphatase 1, regulatory (inhibitor) subunit 15A
mm10_v2_chr11_-_83302586_83302637	0.0162868	Hmga2	ENSMUST00000176374.1|Pex12|ENSMUSG00000018733.4|peroxisomal biogenesis factor 12
mm10_v2_chr16_+_29579331_29579342	0.0147524	Hmga2	ENSMUST00000160597.1|Opa1|ENSMUSG00000038084.10|optic atrophy 1
mm10_v2_chr2_+_62664279_62664300	0.0075752	Hmga2	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr9_+_97179153_97179179	0.00560298	Hmga2	ENSMUST00000177657.1|Rpl7a-ps10|ENSMUSG00000094089.1|ribosomal protein L7A, pseudogene 10
