mm10_v2_chr11_+_104282371_104282392	1.53571	Hnf4a	ENSMUST00000106988.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau 	ENSMUST00000106989.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr7_+_25268387_25268420	1.40473	Hnf4a	ENSMUST00000169392.1|Cic|ENSMUSG00000005442.7|capicua homolog (Drosophila)
mm10_v2_chr14_+_101840602_101840677	1.37422	Hnf4a	ENSMUST00000159314.1|Lmo7|ENSMUSG00000033060.9|LIM domain only 7
mm10_v2_chr2_-_131042682_131042682	1.34488	Hnf4a	ENSMUST00000028787.5|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4 	ENSMUST00000110239.1|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4 	ENSMUST00000110234.1|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4
mm10_v2_chr2_-_131043088_131043088	1.22683	Hnf4a	ENSMUST00000110240.3|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4 	ENSMUST00000066958.4|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4 	ENSMUST00000110235.1|Gfra4|ENSMUSG00000027316.9|glial cell line derived neurotrophic factor family receptor alpha 4
mm10_v2_chr14_+_101840501_101840554	1.08101	Hnf4a	ENSMUST00000159026.1|Lmo7|ENSMUSG00000033060.9|LIM domain only 7
mm10_v2_chr3_-_84305385_84305456	1.07376	Hnf4a	ENSMUST00000122849.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2 	ENSMUST00000132283.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr13_-_41273977_41273977	1.06653	Hnf4a	ENSMUST00000163881.1|Gm17364|ENSMUSG00000090853.1|predicted gene, 17364
mm10_v2_chr1_-_155417394_155417435	1.03925	Hnf4a	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr4_+_136286061_136286114	1.01568	Hnf4a	ENSMUST00000069195.4|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46 	ENSMUST00000130658.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chrX_-_162565514_162565617	0.954463	Hnf4a	ENSMUST00000154424.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr6_+_86195214_86195251	0.86266	Hnf4a	ENSMUST00000032066.9|Tgfa|ENSMUSG00000029999.9|transforming growth factor alpha
mm10_v2_chr19_+_44992127_44992136	0.858988	Hnf4a	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chrX_-_105929206_105929321	0.857319	Hnf4a	ENSMUST00000134381.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000154866.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr5_+_19907774_19907861	0.856913	Hnf4a	ENSMUST00000115267.2|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr15_-_102722120_102722137	0.856167	Hnf4a	ENSMUST00000171838.1|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr17_-_91088726_91088858	0.828755	Hnf4a	ENSMUST00000072671.7|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000174331.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000161402.3|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000054059.8|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr2_+_71117923_71118061	0.814539	Hnf4a	ENSMUST00000028403.2|Cybrd1|ENSMUSG00000027015.4|cytochrome b reductase 1
mm10_v2_chrX_-_105929333_105929382	0.805047	Hnf4a	ENSMUST00000134507.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000137453.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000150914.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr7_+_112225856_112225900	0.794378	Hnf4a	ENSMUST00000050149.5|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENSMUST00000106647.1|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENSMUST00000106648.1|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2
mm10_v2_chr7_+_45896941_45897101	0.792956	Hnf4a	ENSMUST00000069772.7|Tmem143|ENSMUSG00000002781.11|transmembrane protein 143 	ENSMUST00000107716.1|Tmem143|ENSMUSG00000002781.11|transmembrane protein 143
mm10_v2_chr3_-_84304762_84304809	0.778468	Hnf4a	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr7_+_67222544_67222635	0.762655	Hnf4a	ENSMUST00000058771.5|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4 	ENSMUST00000179106.1|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4
mm10_v2_chr5_+_117120120_117120180	0.759653	Hnf4a	ENSMUST00000111978.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3
mm10_v2_chr11_-_81968415_81968457	0.755834	Hnf4a	ENSMUST00000066197.6|Asic2|ENSMUSG00000020704.7|acid-sensing (proton-gated) ion channel 2
mm10_v2_chr15_+_82252397_82252475	0.745504	Hnf4a	ENSMUST00000136948.1|1500009C09Rik|ENSMUSG00000068099.4|RIKEN cDNA 1500009C09 gene
mm10_v2_chr16_-_34513944_34514056	0.742586	Hnf4a	ENSMUST00000151491.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114960.2|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr4_+_126609818_126609896	0.717465	Hnf4a	ENSMUST00000097886.3|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene 	ENSMUST00000164362.1|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene
mm10_v2_chr15_-_102722150_102722178	0.717396	Hnf4a	ENSMUST00000023818.3|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr8_-_113848615_113848774	0.709056	Hnf4a	ENSMUST00000093113.4|Adamts18|ENSMUSG00000053399.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm10_v2_chr17_+_55445375_55445389	0.705804	Hnf4a	ENSMUST00000133899.1|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2 	ENSMUST00000086878.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr16_-_34514084_34514128	0.671139	Hnf4a	ENSMUST00000089655.5|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr8_-_41016295_41016321	0.660039	Hnf4a	ENSMUST00000131965.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr4_-_118409219_118409282	0.644282	Hnf4a	ENSMUST00000075406.5|Szt2|ENSMUSG00000033253.12|seizure threshold 2
mm10_v2_chr9_-_77347816_77347887	0.626459	Hnf4a	ENSMUST00000184138.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184006.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000185144.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000034910.9|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr7_+_45897429_45897534	0.617642	Hnf4a	ENSMUST00000140243.1|Tmem143|ENSMUSG00000002781.11|transmembrane protein 143
mm10_v2_chr2_+_3704787_3704807	0.610477	Hnf4a	ENSMUST00000115054.2|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr3_+_107877227_107877252	0.607247	Hnf4a	ENSMUST00000037375.8|Eps8l3|ENSMUSG00000040600.8|EPS8-like 3
mm10_v2_chr1_-_77515048_77515102	0.601249	Hnf4a	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chr17_-_35909626_35909700	0.59604	Hnf4a	ENSMUST00000141132.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1
mm10_v2_chr3_-_108085346_108085412	0.589517	Hnf4a	ENSMUST00000078912.5|Ampd2|ENSMUSG00000027889.11|adenosine monophosphate deaminase 2
mm10_v2_chr9_-_44288332_44288409	0.585009	Hnf4a	ENSMUST00000161408.1|Abcg4|ENSMUSG00000032131.9|ATP-binding cassette, sub-family G (WHITE), member 4
mm10_v2_chr1_-_155417283_155417323	0.582604	Hnf4a	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr9_+_118506226_118506318	0.581821	Hnf4a	ENSMUST00000084820.4|Golga4|ENSMUSG00000038708.9|golgi autoantigen, golgin subfamily a, 4
mm10_v2_chr2_+_130406478_130406532	0.543818	Hnf4a	ENSMUST00000055421.4|Tmem239|ENSMUSG00000049692.6|transmembrane 239
mm10_v2_chr1_+_132008285_132008316	0.525794	Hnf4a	ENSMUST00000146432.1|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chr1_-_52190901_52190915	0.522316	Hnf4a	ENSMUST00000156887.1|Gls|ENSMUSG00000026103.8|glutaminase 	ENSMUST00000129107.1|Gls|ENSMUSG00000026103.8|glutaminase
mm10_v2_chr18_-_79109391_79109510	0.515337	Hnf4a	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr6_-_41636389_41636409	0.509564	Hnf4a	ENSMUST00000031902.5|Trpv6|ENSMUSG00000029868.8|transient receptor potential cation channel, subfamily V, member 6
mm10_v2_chr6_+_125145235_125145251	0.505318	Hnf4a	ENSMUST00000119527.1|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000088276.6|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000051171.7|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1 	ENSMUST00000117675.1|Iffo1|ENSMUSG00000038271.11|intermediate filament family orphan 1
mm10_v2_chrX_-_105929397_105929408	0.500263	Hnf4a	ENSMUST00000113573.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000130980.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr12_+_58211772_58211804	0.499994	Hnf4a	ENSMUST00000110671.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1 	ENSMUST00000044299.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1
mm10_v2_chr8_+_84990585_84990649	0.499824	Hnf4a	ENSMUST00000064495.6|Hook2|ENSMUSG00000052566.7|hook homolog 2 (Drosophila)
mm10_v2_chr3_-_67463828_67463943	0.497668	Hnf4a	ENSMUST00000058981.2|Lxn|ENSMUSG00000047557.2|latexin
mm10_v2_chrX_-_95166307_95166539	0.496778	Hnf4a	ENSMUST00000113873.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113876.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113885.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113883.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182001.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113882.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113878.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182562.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9
mm10_v2_chr13_+_67833235_67833235	0.494825	Hnf4a	ENSMUST00000060609.7|Gm10037|ENSMUSG00000058246.6|predicted gene 10037
mm10_v2_chr5_+_19907502_19907551	0.4932	Hnf4a	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr7_-_110614761_110614928	0.486518	Hnf4a	ENSMUST00000166020.1|Sbf2|ENSMUSG00000038371.8|SET binding factor 2 	ENSMUST00000171218.1|Sbf2|ENSMUSG00000038371.8|SET binding factor 2 	ENSMUST00000033058.7|Sbf2|ENSMUSG00000038371.8|SET binding factor 2 	ENSMUST00000164759.1|Sbf2|ENSMUSG00000038371.8|SET binding factor 2
mm10_v2_chr2_-_130638094_130638113	0.471551	Hnf4a	ENSMUST00000089561.3|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3 	ENSMUST00000110260.1|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3
mm10_v2_chr19_+_4594312_4594332	0.450545	Hnf4a	ENSMUST00000113825.2|Pcx|ENSMUSG00000024892.9|pyruvate carboxylase
mm10_v2_chr15_+_12117848_12117905	0.435063	Hnf4a	ENSMUST00000128475.1|Zfr|ENSMUSG00000022201.9|zinc finger RNA binding protein 	ENSMUST00000134277.1|Zfr|ENSMUSG00000022201.9|zinc finger RNA binding protein
mm10_v2_chr7_-_67222412_67222458	0.422445	Hnf4a	ENSMUST00000181631.1|1700112J16Rik|ENSMUSG00000097527.1|RIKEN cDNA 1700112J16 gene
mm10_v2_chr9_-_44288535_44288615	0.418867	Hnf4a	ENSMUST00000161354.1|Abcg4|ENSMUSG00000032131.9|ATP-binding cassette, sub-family G (WHITE), member 4
mm10_v2_chr12_-_67222549_67222578	0.414338	Hnf4a	ENSMUST00000037181.8|Mdga2|ENSMUSG00000034912.10|MAM domain containing glycosylphosphatidylinositol anchor 2
mm10_v2_chr9_+_58582240_58582292	0.404573	Hnf4a	ENSMUST00000177292.1|Nptn|ENSMUSG00000032336.11|neuroplastin 	ENSMUST00000085651.5|Nptn|ENSMUSG00000032336.11|neuroplastin
mm10_v2_chr8_+_12915879_12915975	0.402352	Hnf4a	ENSMUST00000110876.2|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like 	ENSMUST00000110879.2|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like
mm10_v2_chr7_-_4725082_4725295	0.3906	Hnf4a	ENSMUST00000086363.4|Tmem150b|ENSMUSG00000046456.8|transmembrane protein 150B 	ENSMUST00000086364.4|Tmem150b|ENSMUSG00000046456.8|transmembrane protein 150B
mm10_v2_chr17_-_35910032_35910076	0.387441	Hnf4a	ENSMUST00000141662.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000056034.6|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000077494.6|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000149277.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1 	ENSMUST00000061052.5|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1
mm10_v2_chr7_+_28833975_28834146	0.379697	Hnf4a	ENSMUST00000066723.8|Lgals4|ENSMUSG00000053964.10|lectin, galactose binding, soluble 4
mm10_v2_chr16_-_34095983_34096060	0.375683	Hnf4a	ENSMUST00000114973.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114964.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr2_-_59160644_59160683	0.366405	Hnf4a	ENSMUST00000077687.5|Ccdc148|ENSMUSG00000036641.8|coiled-coil domain containing 148
mm10_v2_chr15_+_102150502_102150577	0.365349	Hnf4a	ENSMUST00000023806.6|Soat2|ENSMUSG00000023045.6|sterol O-acyltransferase 2
mm10_v2_chr2_-_77170592_77170645	0.36499	Hnf4a	ENSMUST00000164114.2|Ccdc141|ENSMUSG00000044033.10|coiled-coil domain containing 141 	ENSMUST00000049544.7|Ccdc141|ENSMUSG00000044033.10|coiled-coil domain containing 141
mm10_v2_chr4_-_138326234_138326307	0.363627	Hnf4a	ENSMUST00000105817.3|Pink1|ENSMUSG00000028756.6|PTEN induced putative kinase 1 	ENSMUST00000030536.6|Pink1|ENSMUSG00000028756.6|PTEN induced putative kinase 1
mm10_v2_chr4_-_119538769_119538769	0.359188	Hnf4a	ENSMUST00000079611.6|AA415398|ENSMUSG00000087385.2|expressed sequence AA415398
mm10_v2_chr9_-_77347787_77347815	0.358934	Hnf4a	ENSMUST00000184848.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein 	ENSMUST00000184415.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr11_+_3895223_3895310	0.357345	Hnf4a	ENSMUST00000055931.4|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18 	ENSMUST00000109996.1|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18
mm10_v2_chr1_-_55226768_55226813	0.353477	Hnf4a	ENSMUST00000027121.8|Rftn2|ENSMUSG00000025978.8|raftlin family member 2 	ENSMUST00000114428.2|Rftn2|ENSMUSG00000025978.8|raftlin family member 2
mm10_v2_chr11_+_55213783_55213814	0.351119	Hnf4a	ENSMUST00000108867.1|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1
mm10_v2_chr6_+_54429603_54429649	0.349023	Hnf4a	ENSMUST00000132855.1|Wipf3|ENSMUSG00000086040.2|WAS/WASL interacting protein family, member 3 	ENSMUST00000126637.1|Wipf3|ENSMUSG00000086040.2|WAS/WASL interacting protein family, member 3
mm10_v2_chr17_+_34604262_34604304	0.33898	Hnf4a	ENSMUST00000174041.1|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr4_+_110397661_110397708	0.326972	Hnf4a	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr10_-_13552838_13552870	0.323712	Hnf4a	ENSMUST00000105541.1|Pex3|ENSMUSG00000019809.10|peroxisomal biogenesis factor 3
mm10_v2_chr8_+_13037308_13037390	0.317978	Hnf4a	ENSMUST00000063820.5|F10|ENSMUSG00000031444.10|coagulation factor X 	ENSMUST00000033821.4|F10|ENSMUSG00000031444.10|coagulation factor X
mm10_v2_chr5_+_30232581_30232680	0.317398	Hnf4a	ENSMUST00000145167.1|Ept1|ENSMUSG00000075703.9|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm10_v2_chr8_-_121944886_121944908	0.311785	Hnf4a	ENSMUST00000057653.7|Car5a|ENSMUSG00000025317.7|carbonic anhydrase 5a, mitochondrial
mm10_v2_chr17_-_25785324_25785343	0.305611	Hnf4a	ENSMUST00000150324.1|Haghl|ENSMUSG00000061046.3|hydroxyacylglutathione hydrolase-like
mm10_v2_chr16_-_22439719_22439733	0.295761	Hnf4a	ENSMUST00000079601.6|Etv5|ENSMUSG00000013089.9|ets variant gene 5
mm10_v2_chr11_-_61267177_61267198	0.294578	Hnf4a	ENSMUST00000066277.3|Aldh3a2|ENSMUSG00000010025.12|aldehyde dehydrogenase family 3, subfamily A2 	ENSMUST00000074127.7|Aldh3a2|ENSMUSG00000010025.12|aldehyde dehydrogenase family 3, subfamily A2 	ENSMUST00000108715.2|Aldh3a2|ENSMUSG00000010025.12|aldehyde dehydrogenase family 3, subfamily A2
mm10_v2_chr1_+_24005505_24005505	0.292769	Hnf4a	ENSMUST00000181961.1|Gm26524|ENSMUSG00000096985.1|predicted gene, 26524
mm10_v2_chr19_+_46152505_46152514	0.289151	Hnf4a	ENSMUST00000026254.7|Gbf1|ENSMUSG00000025224.8|golgi-specific brefeldin A-resistance factor 1
mm10_v2_chrX_+_6415736_6415747	0.284871	Hnf4a	ENSMUST00000143641.3|Shroom4|ENSMUSG00000068270.9|shroom family member 4
mm10_v2_chr19_-_45998479_45998521	0.284161	Hnf4a	ENSMUST00000045396.7|9130011E15Rik|ENSMUSG00000039901.9|RIKEN cDNA 9130011E15 gene
mm10_v2_chr10_-_60752773_60752820	0.276436	Hnf4a	ENSMUST00000117513.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3 	ENSMUST00000119595.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3
mm10_v2_chr9_-_57147034_57147034	0.275919	Hnf4a	ENSMUST00000034842.4|Neil1|ENSMUSG00000032298.7|nei endonuclease VIII-like 1 (E. coli)
mm10_v2_chr2_-_27248335_27248346	0.26684	Hnf4a	ENSMUST00000139312.1|Sardh|ENSMUSG00000009614.10|sarcosine dehydrogenase
mm10_v2_chr3_+_7612702_7612705	0.266064	Hnf4a	ENSMUST00000181286.1|Gm16685|ENSMUSG00000097804.1|predicted gene, 16685
mm10_v2_chr6_-_122602404_122602444	0.264822	Hnf4a	ENSMUST00000112586.1|Apobec1|ENSMUSG00000040613.8|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
mm10_v2_chrX_-_88760312_88760319	0.258151	Hnf4a	ENSMUST00000182943.1|Gm27000|ENSMUSG00000097961.1|predicted gene, 27000
mm10_v2_chr6_-_86765807_86765834	0.254048	Hnf4a	ENSMUST00000123732.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr7_+_66689889_66689980	0.24474	Hnf4a	ENSMUST00000153007.1|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila) 	ENSMUST00000177726.1|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila) 	ENSMUST00000121777.2|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila) 	ENSMUST00000150071.1|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila) 	ENSMUST00000077967.6|Lins|ENSMUSG00000053091.10|lines homolog (Drosophila)
mm10_v2_chr6_-_122602345_122602400	0.244307	Hnf4a	ENSMUST00000147760.1|Apobec1|ENSMUSG00000040613.8|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 	ENSMUST00000112585.1|Apobec1|ENSMUSG00000040613.8|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
mm10_v2_chrX_-_73659724_73659877	0.238288	Hnf4a	ENSMUST00000114473.1|Pnck|ENSMUSG00000002012.7|pregnancy upregulated non-ubiquitously expressed CaM kinase 	ENSMUST00000002087.7|Pnck|ENSMUSG00000002012.7|pregnancy upregulated non-ubiquitously expressed CaM kinase
mm10_v2_chrX_-_73660047_73660117	0.237557	Hnf4a	ENSMUST00000114472.1|Pnck|ENSMUSG00000002012.7|pregnancy upregulated non-ubiquitously expressed CaM kinase
mm10_v2_chr2_+_25500750_25500769	0.23184	Hnf4a	ENSMUST00000015239.3|Fbxw5|ENSMUSG00000015095.6|F-box and WD-40 domain protein 5
mm10_v2_chr12_-_93929102_93929102	0.229452	Hnf4a	ENSMUST00000180321.1|Gm9726|ENSMUSG00000094935.1|predicted gene 9726
mm10_v2_chr16_+_8513429_8513497	0.227723	Hnf4a	ENSMUST00000065987.7|Abat|ENSMUSG00000057880.6|4-aminobutyrate aminotransferase 	ENSMUST00000115838.1|Abat|ENSMUSG00000057880.6|4-aminobutyrate aminotransferase 	ENSMUST00000115839.2|Abat|ENSMUSG00000057880.6|4-aminobutyrate aminotransferase
mm10_v2_chr17_-_80480435_80480462	0.222058	Hnf4a	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr10_-_128744014_128744085	0.21538	Hnf4a	ENSMUST00000026414.7|Dgka|ENSMUSG00000025357.7|diacylglycerol kinase, alpha
mm10_v2_chr3_+_95134088_95134088	0.214675	Hnf4a	ENSMUST00000066386.5|Lysmd1|ENSMUSG00000053769.5|LysM, putative peptidoglycan-binding, domain containing 1
mm10_v2_chr11_-_69413675_69413675	0.21127	Hnf4a	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chr9_-_58249702_58249791	0.206497	Hnf4a	ENSMUST00000135310.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000085673.4|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000114136.2|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000153820.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia 	ENSMUST00000124982.1|Pml|ENSMUSG00000036986.10|promyelocytic leukemia
mm10_v2_chr11_-_8664499_8664551	0.200561	Hnf4a	ENSMUST00000020695.6|Tns3|ENSMUSG00000020422.7|tensin 3
mm10_v2_chr8_-_83594440_83594491	0.191005	Hnf4a	ENSMUST00000019382.9|Tecr|ENSMUSG00000031708.9|trans-2,3-enoyl-CoA reductase 	ENSMUST00000165740.1|Tecr|ENSMUSG00000031708.9|trans-2,3-enoyl-CoA reductase
mm10_v2_chr19_-_6921753_6921803	0.183944	Hnf4a	ENSMUST00000173635.1|Esrra|ENSMUSG00000024955.7|estrogen related receptor, alpha
mm10_v2_chr17_-_26021853_26021866	0.183021	Hnf4a	ENSMUST00000118828.1|Rab11fip3|ENSMUSG00000037098.11|RAB11 family interacting protein 3 (class II)
mm10_v2_chr5_-_66514815_66514837	0.181998	Hnf4a	ENSMUST00000161879.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159357.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr6_-_86765866_86765921	0.171698	Hnf4a	ENSMUST00000113675.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr11_+_74649462_74649520	0.171086	Hnf4a	ENSMUST00000092915.5|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog 	ENSMUST00000117818.1|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog
mm10_v2_chr4_+_152199805_152199821	0.163475	Hnf4a	ENSMUST00000105652.2|Acot7|ENSMUSG00000028937.8|acyl-CoA thioesterase 7
mm10_v2_chr18_+_63708689_63708730	0.156833	Hnf4a	ENSMUST00000072726.5|Wdr7|ENSMUSG00000040560.9|WD repeat domain 7
mm10_v2_chr5_-_103977360_103977403	0.146586	Hnf4a	ENSMUST00000048118.8|Hsd17b13|ENSMUSG00000034528.9|hydroxysteroid (17-beta) dehydrogenase 13
mm10_v2_chr2_+_158028733_158028821	0.134834	Hnf4a	ENSMUST00000152452.1|Rprd1b|ENSMUSG00000027651.10|regulation of nuclear pre-mRNA domain containing 1B
mm10_v2_chr7_-_28598140_28598185	0.133338	Hnf4a	ENSMUST00000040531.8|Samd4b|ENSMUSG00000037513.9|sterile alpha motif domain containing 4B 	ENSMUST00000108283.1|Pak4|ENSMUSG00000030602.6|p21 protein (Cdc42/Rac)-activated kinase 4
mm10_v2_chr11_+_87592897_87593006	0.129104	Hnf4a	ENSMUST00000119628.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr16_-_16560201_16560223	0.125004	Hnf4a	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr5_-_24447587_24447854	0.123875	Hnf4a	ENSMUST00000127194.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000115033.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000123167.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000030799.8|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1
mm10_v2_chr2_-_158028423_158028440	0.122666	Hnf4a	ENSMUST00000029179.4|Tti1|ENSMUSG00000027650.6|TELO2 interacting protein 1
mm10_v2_chr10_+_127849917_127849928	0.119485	Hnf4a	ENSMUST00000077530.2|Rdh19|ENSMUSG00000054052.5|retinol dehydrogenase 19
mm10_v2_chr19_+_46356880_46356942	0.116665	Hnf4a	ENSMUST00000086969.6|Tmem180|ENSMUSG00000025227.8|transmembrane protein 180 	ENSMUST00000128455.1|Tmem180|ENSMUSG00000025227.8|transmembrane protein 180
mm10_v2_chr8_-_83594405_83594432	0.114528	Hnf4a	ENSMUST00000163837.1|Tecr|ENSMUSG00000031708.9|trans-2,3-enoyl-CoA reductase
mm10_v2_chr17_-_46202576_46202673	0.114459	Hnf4a	ENSMUST00000024749.7|Polh|ENSMUSG00000023953.8|polymerase (DNA directed), eta (RAD 30 related)
mm10_v2_chr11_+_78499087_78499123	0.109165	Hnf4a	ENSMUST00000017488.4|Vtn|ENSMUSG00000017344.4|vitronectin
mm10_v2_chr12_-_79192248_79192293	0.105917	Hnf4a	ENSMUST00000161204.1|Rdh11|ENSMUSG00000066441.8|retinol dehydrogenase 11
mm10_v2_chr7_+_112953955_112953975	0.105834	Hnf4a	ENSMUST00000182858.1|Rassf10|ENSMUSG00000098132.1|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10
mm10_v2_chr19_+_44203265_44203288	0.105676	Hnf4a	ENSMUST00000026220.5|Scd3|ENSMUSG00000025202.7|stearoyl-coenzyme A desaturase 3
mm10_v2_chr3_-_79628660_79628745	0.102745	Hnf4a	ENSMUST00000120992.1|Etfdh|ENSMUSG00000027809.8|electron transferring flavoprotein, dehydrogenase
mm10_v2_chr12_+_109544498_109544703	0.101274	Hnf4a	ENSMUST00000126289.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr3_-_107696462_107696574	0.0975083	Hnf4a	ENSMUST00000029490.8|Ahcyl1|ENSMUSG00000027893.8|S-adenosylhomocysteine hydrolase-like 1
mm10_v2_chr1_+_135132693_135132741	0.0935033	Hnf4a	ENSMUST00000049449.4|Ptpn7|ENSMUSG00000031506.5|protein tyrosine phosphatase, non-receptor type 7
mm10_v2_chr4_+_110397764_110397808	0.0928675	Hnf4a	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr2_+_92375306_92375306	0.0928079	Hnf4a	ENSMUST00000028650.8|Pex16|ENSMUSG00000027222.8|peroxisomal biogenesis factor 16
mm10_v2_chr3_-_121815212_121815302	0.0915701	Hnf4a	ENSMUST00000029770.5|Abcd3|ENSMUSG00000028127.5|ATP-binding cassette, sub-family D (ALD), member 3
mm10_v2_chr8_+_117095854_117095998	0.0898118	Hnf4a	ENSMUST00000034308.8|Bcmo1|ENSMUSG00000031845.9|beta-carotene 15,15'-monooxygenase 	ENSMUST00000167370.1|Bcmo1|ENSMUSG00000031845.9|beta-carotene 15,15'-monooxygenase 	ENSMUST00000176860.1|Bcmo1|ENSMUSG00000031845.9|beta-carotene 15,15'-monooxygenase
mm10_v2_chr7_-_31055594_31055659	0.0881703	Hnf4a	ENSMUST00000039909.6|Fxyd1|ENSMUSG00000036570.8|FXYD domain-containing ion transport regulator 1
mm10_v2_chr11_-_77894096_77894096	0.0848504	Hnf4a	ENSMUST00000017597.4|Pipox|ENSMUSG00000017453.4|pipecolic acid oxidase
mm10_v2_chr4_+_120854786_120854843	0.0839665	Hnf4a	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr14_-_41006882_41006976	0.0724258	Hnf4a	ENSMUST00000152837.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A 	ENSMUST00000134715.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chrX_-_150814265_150814345	0.067833	Hnf4a	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr10_-_127180579_127180645	0.0678197	Hnf4a	ENSMUST00000095270.2|Slc26a10|ENSMUSG00000040441.8|solute carrier family 26, member 10
mm10_v2_chr2_+_164805082_164805109	0.0675978	Hnf4a	ENSMUST00000052107.4|Zswim3|ENSMUSG00000045822.4|zinc finger SWIM-type containing 3
mm10_v2_chr11_-_101987004_101987013	0.0658078	Hnf4a	ENSMUST00000107173.2|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) 	ENSMUST00000107172.1|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
mm10_v2_chr11_+_73199445_73199500	0.0572871	Hnf4a	ENSMUST00000006105.6|Shpk|ENSMUSG00000005951.7|sedoheptulokinase
mm10_v2_chr14_+_54894133_54894155	0.0541479	Hnf4a	ENSMUST00000116476.2|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1 	ENSMUST00000022808.7|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1 	ENSMUST00000150975.1|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1
mm10_v2_chr5_+_31698050_31698067	0.0539482	Hnf4a	ENSMUST00000114507.3|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein 	ENSMUST00000063813.4|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein 	ENSMUST00000071531.5|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein 	ENSMUST00000131995.1|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein
mm10_v2_chr7_-_66689474_66689491	0.053409	Hnf4a	ENSMUST00000068980.3|Asb7|ENSMUSG00000030509.10|ankyrin repeat and SOCS box-containing 7
mm10_v2_chr15_+_99972780_99972821	0.0523579	Hnf4a	ENSMUST00000100206.2|Larp4|ENSMUSG00000023025.9|La ribonucleoprotein domain family, member 4
mm10_v2_chr7_+_28392916_28393013	0.0477617	Hnf4a	ENSMUST00000003529.8|Paf1|ENSMUSG00000003437.8|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
mm10_v2_chr4_+_131873608_131873679	0.0462316	Hnf4a	ENSMUST00000053819.3|Srsf4|ENSMUSG00000028911.10|serine/arginine-rich splicing factor 4
mm10_v2_chr11_-_86757483_86757572	0.0460207	Hnf4a	ENSMUST00000060766.9|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc) 	ENSMUST00000103186.4|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc)
mm10_v2_chr11_+_101582236_101582312	0.0425845	Hnf4a	ENSMUST00000039581.7|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000100403.2|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000107194.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000128614.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A
mm10_v2_chr16_-_17928136_17928219	0.0406635	Hnf4a	ENSMUST00000003622.8|Slc25a1|ENSMUSG00000003528.8|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm10_v2_chr3_+_96830069_96830115	0.038578	Hnf4a	ENSMUST00000058865.7|Pdzk1|ENSMUSG00000038298.8|PDZ domain containing 1
mm10_v2_chr1_+_175632169_175632185	0.0300079	Hnf4a	ENSMUST00000097458.3|Kmo|ENSMUSG00000039783.9|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
mm10_v2_chr17_+_32621319_32621319	0.0262958	Hnf4a	ENSMUST00000077639.5|Gm9705|ENSMUSG00000062464.5|predicted gene 9705
mm10_v2_chr5_+_31697960_31698042	0.02555	Hnf4a	ENSMUST00000114515.2|Bre|ENSMUSG00000052139.12|brain and reproductive organ-expressed protein
mm10_v2_chr11_-_23519181_23519233	0.0253262	Hnf4a	ENSMUST00000020527.5|1700093K21Rik|ENSMUSG00000020286.6|RIKEN cDNA 1700093K21 gene
mm10_v2_chr1_-_52499980_52499980	0.0242117	Hnf4a	ENSMUST00000164747.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr17_-_45592262_45592411	0.0151036	Hnf4a	ENSMUST00000164769.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr16_-_16560046_16560145	0.0138952	Hnf4a	ENSMUST00000172181.2|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr16_+_14580221_14580221	0.0123015	Hnf4a	ENSMUST00000147024.1|A630010A05Rik|ENSMUSG00000075395.4|RIKEN cDNA A630010A05 gene
mm10_v2_chr9_+_96196246_96196280	0.00912172	Hnf4a	ENSMUST00000165120.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000034982.9|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr2_-_119477613_119477705	0.00630863	Hnf4a	ENSMUST00000110808.1|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae) 	ENSMUST00000049920.7|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae)
mm10_v2_chr11_-_3504766_3504833	9.45597e-05	Hnf4a	ENSMUST00000044507.5|Inpp5j|ENSMUSG00000034570.6|inositol polyphosphate 5-phosphatase J
