mm10_v2_chrX_+_7919816_7919905	18.5152	Rfx3_Rfx1_Rfx4	ENSMUST00000041096.3|Pcsk1n|ENSMUSG00000039278.10|proprotein convertase subtilisin/kexin type 1 inhibitor
mm10_v2_chr10_-_81472859_81473127	9.51	Rfx3_Rfx1_Rfx4	ENSMUST00000147524.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5 	ENSMUST00000119060.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5
mm10_v2_chr11_-_6606053_6606053	9.28175	Rfx3_Rfx1_Rfx4	ENSMUST00000045713.3|Nacad|ENSMUSG00000041073.4|NAC alpha domain containing
mm10_v2_chr18_-_78206408_78206440	8.91499	Rfx3_Rfx1_Rfx4	ENSMUST00000163367.1|Slc14a2|ENSMUSG00000024552.9|solute carrier family 14 (urea transporter), member 2
mm10_v2_chr12_+_29528382_29528468	6.33175	Rfx3_Rfx1_Rfx4	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr10_+_80295930_80296003	6.16927	Rfx3_Rfx1_Rfx4	ENSMUST00000105359.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr3_-_84305385_84305456	6.15294	Rfx3_Rfx1_Rfx4	ENSMUST00000122849.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2 	ENSMUST00000132283.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr5_+_33983437_33983529	5.70653	Rfx3_Rfx1_Rfx4	ENSMUST00000114384.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000094869.5|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000114383.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chr1_+_185454803_185454848	5.60555	Rfx3_Rfx1_Rfx4	ENSMUST00000061093.6|Slc30a10|ENSMUSG00000026614.6|solute carrier family 30, member 10
mm10_v2_chr5_+_33983534_33983548	5.3643	Rfx3_Rfx1_Rfx4	ENSMUST00000114382.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chr13_+_55464237_55464319	5.3134	Rfx3_Rfx1_Rfx4	ENSMUST00000046533.7|Prr7|ENSMUSG00000034686.7|proline rich 7 (synaptic)
mm10_v2_chr7_-_4546567_4546567	4.95235	Rfx3_Rfx1_Rfx4	ENSMUST00000065957.5|Syt5|ENSMUSG00000004961.6|synaptotagmin V
mm10_v2_chr4_+_107830958_107830985	4.89602	Rfx3_Rfx1_Rfx4	ENSMUST00000106731.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm10_v2_chr10_+_106470281_106470367	4.71565	Rfx3_Rfx1_Rfx4	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr19_-_46327121_46327156	4.5825	Rfx3_Rfx1_Rfx4	ENSMUST00000041391.4|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing 	ENSMUST00000096029.5|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing
mm10_v2_chr11_-_61453992_61454106	4.40423	Rfx3_Rfx1_Rfx4	ENSMUST00000060255.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000054927.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000102661.3|Rnf112|ENSMUSG00000010086.11|ring finger protein 112
mm10_v2_chr7_-_140082246_140082301	4.33564	Rfx3_Rfx1_Rfx4	ENSMUST00000166758.2|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr7_-_140082489_140082556	4.24352	Rfx3_Rfx1_Rfx4	ENSMUST00000026541.7|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr5_+_30814722_30814776	4.20849	Rfx3_Rfx1_Rfx4	ENSMUST00000114724.1|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr3_-_89245159_89245199	4.17258	Rfx3_Rfx1_Rfx4	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr5_+_30814571_30814641	4.13133	Rfx3_Rfx1_Rfx4	ENSMUST00000031058.8|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr4_+_43669266_43669287	4.10544	Rfx3_Rfx1_Rfx4	ENSMUST00000107864.1|Tmem8b|ENSMUSG00000078716.3|transmembrane protein 8B
mm10_v2_chr11_+_101468164_101468175	4.09343	Rfx3_Rfx1_Rfx4	ENSMUST00000001347.6|Rnd2|ENSMUSG00000001313.6|Rho family GTPase 2
mm10_v2_chr15_+_82256023_82256130	4.07079	Rfx3_Rfx1_Rfx4	ENSMUST00000143238.1|1500009C09Rik|ENSMUSG00000068099.4|RIKEN cDNA 1500009C09 gene
mm10_v2_chr4_+_152338619_152338709	4.02099	Rfx3_Rfx1_Rfx4	ENSMUST00000030775.5|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5 	ENSMUST00000164662.1|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr1_-_60043087_60043175	4.01876	Rfx3_Rfx1_Rfx4	ENSMUST00000027172.6|Ica1l|ENSMUSG00000026018.6|islet cell autoantigen 1-like
mm10_v2_chr7_+_16944645_16944720	3.93979	Rfx3_Rfx1_Rfx4	ENSMUST00000094807.5|Pnmal2|ENSMUSG00000070802.5|PNMA-like 2
mm10_v2_chr9_-_124424154_124424154	3.77907	Rfx3_Rfx1_Rfx4	ENSMUST00000180270.1|Ppp2r3d|ENSMUSG00000093803.1|protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta
mm10_v2_chr3_-_89245005_89245031	3.75162	Rfx3_Rfx1_Rfx4	ENSMUST00000107464.1|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr7_+_99268338_99268388	3.67759	Rfx3_Rfx1_Rfx4	ENSMUST00000107100.2|Map6|ENSMUSG00000055407.7|microtubule-associated protein 6
mm10_v2_chr17_+_34629533_34629620	3.55822	Rfx3_Rfx1_Rfx4	ENSMUST00000015620.6|Prrt1|ENSMUSG00000015476.6|proline-rich transmembrane protein 1
mm10_v2_chr1_+_66386968_66386999	3.46385	Rfx3_Rfx1_Rfx4	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr9_+_59589288_59589353	3.42496	Rfx3_Rfx1_Rfx4	ENSMUST00000121266.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000118164.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr7_+_45785331_45785390	3.32581	Rfx3_Rfx1_Rfx4	ENSMUST00000120005.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000123585.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr11_-_87359011_87359081	3.27961	Rfx3_Rfx1_Rfx4	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr11_+_70029742_70029837	3.1736	Rfx3_Rfx1_Rfx4	ENSMUST00000132597.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr4_+_152338887_152338967	3.1523	Rfx3_Rfx1_Rfx4	ENSMUST00000005175.4|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr15_+_98167806_98167873	3.10423	Rfx3_Rfx1_Rfx4	ENSMUST00000031914.4|AI836003|ENSMUSG00000029875.4|expressed sequence AI836003
mm10_v2_chr11_+_108425192_108425304	3.10063	Rfx3_Rfx1_Rfx4	ENSMUST00000150863.2|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000061287.5|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000149683.2|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chr18_-_22850738_22850759	3.0176	Rfx3_Rfx1_Rfx4	ENSMUST00000092015.4|Nol4|ENSMUSG00000041923.9|nucleolar protein 4 	ENSMUST00000069215.6|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr12_+_52699297_52699411	2.99722	Rfx3_Rfx1_Rfx4	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr19_-_59943647_59943678	2.95546	Rfx3_Rfx1_Rfx4	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr3_+_13946368_13946379	2.88459	Rfx3_Rfx1_Rfx4	ENSMUST00000171075.1|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like 	ENSMUST00000108372.2|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like
mm10_v2_chr7_+_126950518_126950584	2.86843	Rfx3_Rfx1_Rfx4	ENSMUST00000106335.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2 	ENSMUST00000146017.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr10_+_80299084_80299126	2.86735	Rfx3_Rfx1_Rfx4	ENSMUST00000154212.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chrX_-_8132770_8132857	2.78618	Rfx3_Rfx1_Rfx4	ENSMUST00000130832.1|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13 	ENSMUST00000033506.6|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13 	ENSMUST00000115623.1|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13 	ENSMUST00000153839.1|Wdr13|ENSMUSG00000031166.7|WD repeat domain 13
mm10_v2_chr6_-_77979652_77979708	2.78588	Rfx3_Rfx1_Rfx4	ENSMUST00000161846.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000160894.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2
mm10_v2_chr3_+_82358056_82358075	2.73721	Rfx3_Rfx1_Rfx4	ENSMUST00000091014.4|Map9|ENSMUSG00000033900.8|microtubule-associated protein 9
mm10_v2_chr11_-_71033462_71033513	2.66362	Rfx3_Rfx1_Rfx4	ENSMUST00000156068.2|6330403K07Rik|ENSMUSG00000018451.6|RIKEN cDNA 6330403K07 gene
mm10_v2_chr17_+_46254017_46254165	2.66361	Rfx3_Rfx1_Rfx4	ENSMUST00000095262.4|Lrrc73|ENSMUSG00000071073.4|leucine rich repeat containing 73
mm10_v2_chr4_+_137681663_137681719	2.64324	Rfx3_Rfx1_Rfx4	ENSMUST00000047243.5|Rap1gap|ENSMUSG00000041351.10|Rap1 GTPase-activating protein
mm10_v2_chr3_+_108591279_108591414	2.6064	Rfx3_Rfx1_Rfx4	ENSMUST00000051145.8|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47 	ENSMUST00000139626.1|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47
mm10_v2_chr1_-_133753681_133753857	2.58379	Rfx3_Rfx1_Rfx4	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr7_+_44428938_44429018	2.54162	Rfx3_Rfx1_Rfx4	ENSMUST00000127790.1|Lrrc4b|ENSMUSG00000047085.8|leucine rich repeat containing 4B
mm10_v2_chr5_-_136170634_136170661	2.53578	Rfx3_Rfx1_Rfx4	ENSMUST00000041048.1|Orai2|ENSMUSG00000039747.7|ORAI calcium release-activated calcium modulator 2
mm10_v2_chr7_+_126950687_126950729	2.5291	Rfx3_Rfx1_Rfx4	ENSMUST00000106333.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr5_-_103211251_103211334	2.51626	Rfx3_Rfx1_Rfx4	ENSMUST00000060871.5|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112846.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000170792.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112847.2|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr10_-_79874233_79874439	2.51055	Rfx3_Rfx1_Rfx4	ENSMUST00000166023.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000167707.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000165601.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764
mm10_v2_chr1_-_155417283_155417323	2.49994	Rfx3_Rfx1_Rfx4	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr13_+_43615710_43615788	2.47418	Rfx3_Rfx1_Rfx4	ENSMUST00000059986.2|Rnf182|ENSMUSG00000044164.2|ring finger protein 182
mm10_v2_chr7_+_126950837_126950966	2.41972	Rfx3_Rfx1_Rfx4	ENSMUST00000106332.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr8_+_123235086_123235096	2.39743	Rfx3_Rfx1_Rfx4	ENSMUST00000181432.1|4933417D19Rik|ENSMUSG00000097637.1|RIKEN cDNA 4933417D19 gene
mm10_v2_chr14_-_78536762_78536851	2.33044	Rfx3_Rfx1_Rfx4	ENSMUST00000123853.1|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr3_+_156562141_156562196	2.3121	Rfx3_Rfx1_Rfx4	ENSMUST00000175773.1|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr9_-_54501496_54501644	2.2779	Rfx3_Rfx1_Rfx4	ENSMUST00000118600.1|Dmxl2|ENSMUSG00000041268.10|Dmx-like 2 	ENSMUST00000118163.1|Dmxl2|ENSMUSG00000041268.10|Dmx-like 2
mm10_v2_chr18_+_31609512_31609512	2.26602	Rfx3_Rfx1_Rfx4	ENSMUST00000164667.1|B930094E09Rik|ENSMUSG00000092124.1|RIKEN cDNA B930094E09 gene
mm10_v2_chr11_+_101552135_101552184	2.21904	Rfx3_Rfx1_Rfx4	ENSMUST00000103099.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1
mm10_v2_chr10_+_34297421_34297513	2.21805	Rfx3_Rfx1_Rfx4	ENSMUST00000047935.6|Tspyl4|ENSMUSG00000039485.6|TSPY-like 4
mm10_v2_chr16_-_3909192_3909192	2.20247	Rfx3_Rfx1_Rfx4	ENSMUST00000181699.1|1700016D08Rik|ENSMUSG00000097179.1|RIKEN cDNA 1700016D08 gene
mm10_v2_chr5_-_115652974_115652992	2.162	Rfx3_Rfx1_Rfx4	ENSMUST00000121746.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64 	ENSMUST00000118576.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64
mm10_v2_chr1_+_165461037_165461037	2.13292	Rfx3_Rfx1_Rfx4	ENSMUST00000027853.5|Mpc2|ENSMUSG00000026568.5|mitochondrial pyruvate carrier 2
mm10_v2_chrX_+_136993147_136993216	2.11561	Rfx3_Rfx1_Rfx4	ENSMUST00000113067.1|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18 	ENSMUST00000101227.2|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18
mm10_v2_chr11_+_53567361_53567526	2.1147	Rfx3_Rfx1_Rfx4	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr7_+_3390629_3390707	2.07572	Rfx3_Rfx1_Rfx4	ENSMUST00000182222.1|Cacng8|ENSMUSG00000053395.9|calcium channel, voltage-dependent, gamma subunit 8
mm10_v2_chr11_-_116335384_116335399	2.06678	Rfx3_Rfx1_Rfx4	ENSMUST00000036215.7|Foxj1|ENSMUSG00000034227.7|forkhead box J1
mm10_v2_chr7_-_31051431_31051488	2.06289	Rfx3_Rfx1_Rfx4	ENSMUST00000073892.4|Fxyd7|ENSMUSG00000036578.6|FXYD domain-containing ion transport regulator 7
mm10_v2_chrX_+_136993281_136993308	2.0614	Rfx3_Rfx1_Rfx4	ENSMUST00000033804.4|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18
mm10_v2_chr1_-_155417394_155417435	2.0378	Rfx3_Rfx1_Rfx4	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr7_+_19176416_19176440	2.0325	Rfx3_Rfx1_Rfx4	ENSMUST00000117338.1|Eml2|ENSMUSG00000040811.9|echinoderm microtubule associated protein like 2
mm10_v2_chr14_-_78536854_78536879	1.98046	Rfx3_Rfx1_Rfx4	ENSMUST00000022593.5|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr3_-_108536466_108536536	1.97561	Rfx3_Rfx1_Rfx4	ENSMUST00000048012.6|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106626.2|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106625.3|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene
mm10_v2_chr12_-_84361802_84361838	1.92727	Rfx3_Rfx1_Rfx4	ENSMUST00000021659.1|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B 	ENSMUST00000065536.2|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B
mm10_v2_chr9_+_72985568_72985642	1.91185	Rfx3_Rfx1_Rfx4	ENSMUST00000150826.2|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1 	ENSMUST00000085350.4|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1 	ENSMUST00000140675.1|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1
mm10_v2_chr12_-_83439910_83439934	1.91139	Rfx3_Rfx1_Rfx4	ENSMUST00000177801.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr17_-_25837082_25837295	1.90446	Rfx3_Rfx1_Rfx4	ENSMUST00000183929.1|Rhbdl1|ENSMUSG00000025735.7|rhomboid, veinlet-like 1 (Drosophila) 	ENSMUST00000184865.1|Rhbdl1|ENSMUSG00000025735.7|rhomboid, veinlet-like 1 (Drosophila) 	ENSMUST00000026831.7|Rhbdl1|ENSMUSG00000025735.7|rhomboid, veinlet-like 1 (Drosophila)
mm10_v2_chr5_-_114813943_114813976	1.89887	Rfx3_Rfx1_Rfx4	ENSMUST00000061251.5|1500011B03Rik|ENSMUSG00000072694.7|RIKEN cDNA 1500011B03 gene 	ENSMUST00000112160.3|1500011B03Rik|ENSMUSG00000072694.7|RIKEN cDNA 1500011B03 gene
mm10_v2_chr12_-_84148449_84148499	1.87611	Rfx3_Rfx1_Rfx4	ENSMUST00000061425.2|Pnma1|ENSMUSG00000054383.2|paraneoplastic antigen MA1
mm10_v2_chr8_-_106337987_106337996	1.84081	Rfx3_Rfx1_Rfx4	ENSMUST00000067512.7|Smpd3|ENSMUSG00000031906.8|sphingomyelin phosphodiesterase 3, neutral
mm10_v2_chr7_+_44465391_44465419	1.83807	Rfx3_Rfx1_Rfx4	ENSMUST00000035929.4|Aspdh|ENSMUSG00000038704.4|aspartate dehydrogenase domain containing 	ENSMUST00000146128.1|Aspdh|ENSMUSG00000038704.4|aspartate dehydrogenase domain containing
mm10_v2_chr15_-_66500857_66500910	1.82855	Rfx3_Rfx1_Rfx4	ENSMUST00000023006.6|Lrrc6|ENSMUSG00000022375.6|leucine rich repeat containing 6 (testis)
mm10_v2_chr17_-_34836869_34836959	1.82733	Rfx3_Rfx1_Rfx4	ENSMUST00000077477.5|Stk19|ENSMUSG00000061207.5|serine/threonine kinase 19
mm10_v2_chr1_-_84696182_84696221	1.82552	Rfx3_Rfx1_Rfx4	ENSMUST00000049126.6|Dner|ENSMUSG00000036766.6|delta/notch-like EGF-related receptor
mm10_v2_chr17_-_35979679_35979831	1.80446	Rfx3_Rfx1_Rfx4	ENSMUST00000173724.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000172900.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000174849.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3
mm10_v2_chr16_+_78301458_78301496	1.79021	Rfx3_Rfx1_Rfx4	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr2_-_5714490_5714538	1.78911	Rfx3_Rfx1_Rfx4	ENSMUST00000044009.7|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr7_+_29071597_29071613	1.78186	Rfx3_Rfx1_Rfx4	ENSMUST00000180926.1|Gm26604|ENSMUSG00000097079.1|predicted gene, 26604
mm10_v2_chr11_+_87760533_87760587	1.78055	Rfx3_Rfx1_Rfx4	ENSMUST00000039627.5|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1 	ENSMUST00000100644.3|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1
mm10_v2_chr11_+_70030023_70030083	1.77969	Rfx3_Rfx1_Rfx4	ENSMUST00000143920.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr6_-_77979515_77979622	1.77391	Rfx3_Rfx1_Rfx4	ENSMUST00000159626.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000075340.5|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000162273.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2
mm10_v2_chr5_+_24985840_24985862	1.76324	Rfx3_Rfx1_Rfx4	ENSMUST00000075081.6|1500035N22Rik|ENSMUSG00000059631.6|RIKEN cDNA 1500035N22 gene
mm10_v2_chr9_+_72985504_72985567	1.75476	Rfx3_Rfx1_Rfx4	ENSMUST00000156879.1|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1
mm10_v2_chr9_+_72985410_72985429	1.74476	Rfx3_Rfx1_Rfx4	ENSMUST00000037977.8|Ccpg1|ENSMUSG00000034563.10|cell cycle progression 1
mm10_v2_chr7_+_16959714_16959800	1.73232	Rfx3_Rfx1_Rfx4	ENSMUST00000038163.6|Pnmal1|ENSMUSG00000041141.6|PNMA-like 1
mm10_v2_chr17_-_80290476_80290476	1.72711	Rfx3_Rfx1_Rfx4	ENSMUST00000086555.3|Dhx57|ENSMUSG00000035051.8|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 	ENSMUST00000038166.7|Dhx57|ENSMUSG00000035051.8|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm10_v2_chr17_-_35979237_35979526	1.72508	Rfx3_Rfx1_Rfx4	ENSMUST00000165613.2|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000173872.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3
mm10_v2_chr4_-_155669171_155669231	1.71649	Rfx3_Rfx1_Rfx4	ENSMUST00000103176.3|Mib2|ENSMUSG00000029060.11|mindbomb homolog 2 (Drosophila)
mm10_v2_chr19_+_6061176_6061235	1.7159	Rfx3_Rfx1_Rfx4	ENSMUST00000162726.3|Znhit2|ENSMUSG00000075227.5|zinc finger, HIT domain containing 2
mm10_v2_chr5_-_92042630_92042701	1.6948	Rfx3_Rfx1_Rfx4	ENSMUST00000113140.1|Cdkl2|ENSMUSG00000029403.8|cyclin-dependent kinase-like 2 (CDC2-related kinase) 	ENSMUST00000113143.1|Cdkl2|ENSMUSG00000029403.8|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm10_v2_chr7_+_133776857_133776942	1.63504	Rfx3_Rfx1_Rfx4	ENSMUST00000065359.5|Fank1|ENSMUSG00000053111.6|fibronectin type 3 and ankyrin repeat domains 1 	ENSMUST00000151031.1|Fank1|ENSMUSG00000053111.6|fibronectin type 3 and ankyrin repeat domains 1 	ENSMUST00000121560.1|Fank1|ENSMUSG00000053111.6|fibronectin type 3 and ankyrin repeat domains 1
mm10_v2_chr8_-_22805596_22805654	1.58154	Rfx3_Rfx1_Rfx4	ENSMUST00000163739.1|Ap3m2|ENSMUSG00000031539.5|adaptor-related protein complex 3, mu 2 subunit
mm10_v2_chr9_-_106685892_106685961	1.57962	Rfx3_Rfx1_Rfx4	ENSMUST00000169068.1|Tex264|ENSMUSG00000040813.9|testis expressed gene 264 	ENSMUST00000046735.4|Tex264|ENSMUSG00000040813.9|testis expressed gene 264
mm10_v2_chr7_+_6172482_6172531	1.57514	Rfx3_Rfx1_Rfx4	ENSMUST00000108567.1|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444 	ENSMUST00000054680.5|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444 	ENSMUST00000108566.1|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444
mm10_v2_chr8_+_72219726_72219785	1.57183	Rfx3_Rfx1_Rfx4	ENSMUST00000003123.8|Fam32a|ENSMUSG00000003039.8|family with sequence similarity 32, member A
mm10_v2_chr15_-_79658889_79658956	1.56954	Rfx3_Rfx1_Rfx4	ENSMUST00000109648.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A 	ENSMUST00000046816.6|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr5_+_30711564_30711586	1.56821	Rfx3_Rfx1_Rfx4	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr16_-_16829276_16829349	1.56744	Rfx3_Rfx1_Rfx4	ENSMUST00000023468.5|Spag6|ENSMUSG00000022783.5|sperm associated antigen 6
mm10_v2_chr1_+_37299882_37299937	1.56284	Rfx3_Rfx1_Rfx4	ENSMUST00000136846.1|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I 	ENSMUST00000027287.4|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I 	ENSMUST00000132401.1|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I
mm10_v2_chr9_-_106685653_106685674	1.55147	Rfx3_Rfx1_Rfx4	ENSMUST00000163441.1|Tex264|ENSMUSG00000040813.9|testis expressed gene 264
mm10_v2_chr13_+_42681513_42681564	1.54624	Rfx3_Rfx1_Rfx4	ENSMUST00000149235.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr19_-_28967794_28967852	1.54141	Rfx3_Rfx1_Rfx4	ENSMUST00000162110.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr13_-_92483996_92484037	1.53976	Rfx3_Rfx1_Rfx4	ENSMUST00000040106.7|Fam151b|ENSMUSG00000034334.7|family with sequence similarity 151, member B
mm10_v2_chr4_+_110397661_110397708	1.53429	Rfx3_Rfx1_Rfx4	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr9_+_74953053_74953091	1.5316	Rfx3_Rfx1_Rfx4	ENSMUST00000170846.1|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr11_-_29247208_29247409	1.52318	Rfx3_Rfx1_Rfx4	ENSMUST00000020754.3|Ccdc104|ENSMUSG00000020462.8|coiled-coil domain containing 104
mm10_v2_chr15_+_89532816_89532890	1.52144	Rfx3_Rfx1_Rfx4	ENSMUST00000167173.1|Shank3|ENSMUSG00000022623.9|SH3/ankyrin domain gene 3
mm10_v2_chr16_+_36875119_36875205	1.52003	Rfx3_Rfx1_Rfx4	ENSMUST00000135406.1|Golgb1|ENSMUSG00000034243.10|golgi autoantigen, golgin subfamily b, macrogolgin 1 	ENSMUST00000023534.6|Golgb1|ENSMUSG00000078096.1|golgi autoantigen, golgin subfamily b, macrogolgin 1 	ENSMUST00000114812.1|Golgb1|ENSMUSG00000034243.10|golgi autoantigen, golgin subfamily b, macrogolgin 1 	ENSMUST00000134616.1|Golgb1|ENSMUSG00000034243.10|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm10_v2_chr1_-_133801031_133801041	1.51501	Rfx3_Rfx1_Rfx4	ENSMUST00000143567.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr7_+_131966446_131966469	1.51176	Rfx3_Rfx1_Rfx4	ENSMUST00000045840.4|Gpr26|ENSMUSG00000040125.4|G protein-coupled receptor 26
mm10_v2_chr2_-_30048827_30048891	1.50778	Rfx3_Rfx1_Rfx4	ENSMUST00000113711.2|Wdr34|ENSMUSG00000039715.8|WD repeat domain 34
mm10_v2_chr7_-_13054665_13054764	1.5012	Rfx3_Rfx1_Rfx4	ENSMUST00000182515.1|Mzf1|ENSMUSG00000030380.10|myeloid zinc finger 1 	ENSMUST00000069289.8|Mzf1|ENSMUSG00000030380.10|myeloid zinc finger 1
mm10_v2_chr12_-_72070991_72071079	1.49814	Rfx3_Rfx1_Rfx4	ENSMUST00000050649.4|Gpr135|ENSMUSG00000043398.4|G protein-coupled receptor 135
mm10_v2_chr16_+_20696175_20696211	1.47574	Rfx3_Rfx1_Rfx4	ENSMUST00000128273.1|Fam131a|ENSMUSG00000050821.7|family with sequence similarity 131, member A
mm10_v2_chr8_-_4259257_4259283	1.46972	Rfx3_Rfx1_Rfx4	ENSMUST00000053252.7|Ctxn1|ENSMUSG00000048644.7|cortexin 1
mm10_v2_chr11_+_21091291_21091339	1.45637	Rfx3_Rfx1_Rfx4	ENSMUST00000093290.5|Peli1|ENSMUSG00000020134.7|pellino 1
mm10_v2_chr18_-_23041641_23041671	1.45483	Rfx3_Rfx1_Rfx4	ENSMUST00000097651.3|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr17_+_34972687_34972705	1.44763	Rfx3_Rfx1_Rfx4	ENSMUST00000007248.3|Hspa1l|ENSMUSG00000007033.3|heat shock protein 1-like
mm10_v2_chr8_-_95142477_95142577	1.43592	Rfx3_Rfx1_Rfx4	ENSMUST00000034240.7|Kifc3|ENSMUSG00000031788.7|kinesin family member C3 	ENSMUST00000169748.1|Kifc3|ENSMUSG00000031788.7|kinesin family member C3
mm10_v2_chr11_+_108587077_108587110	1.41726	Rfx3_Rfx1_Rfx4	ENSMUST00000146912.2|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chr3_+_95134088_95134088	1.39205	Rfx3_Rfx1_Rfx4	ENSMUST00000066386.5|Lysmd1|ENSMUSG00000053769.5|LysM, putative peptidoglycan-binding, domain containing 1
mm10_v2_chr8_-_33747724_33747781	1.38017	Rfx3_Rfx1_Rfx4	ENSMUST00000179364.1|Smim18|ENSMUSG00000094500.1|small integral membrane protein 18
mm10_v2_chrX_+_20364481_20364616	1.37696	Rfx3_Rfx1_Rfx4	ENSMUST00000033372.6|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115391.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115387.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human)
mm10_v2_chr10_+_81574699_81574739	1.37646	Rfx3_Rfx1_Rfx4	ENSMUST00000131794.1|Tle2|ENSMUSG00000034771.9|transducin-like enhancer of split 2, homolog of Drosophila E(spl) 	ENSMUST00000136341.1|Tle2|ENSMUSG00000034771.9|transducin-like enhancer of split 2, homolog of Drosophila E(spl)
mm10_v2_chr2_+_166792525_166792536	1.37148	Rfx3_Rfx1_Rfx4	ENSMUST00000065753.1|Trp53rk|ENSMUSG00000042854.9|transformation related protein 53 regulating kinase
mm10_v2_chr15_-_79141197_79141268	1.35077	Rfx3_Rfx1_Rfx4	ENSMUST00000169604.1|1700088E04Rik|ENSMUSG00000033029.6|RIKEN cDNA 1700088E04 gene
mm10_v2_chr2_+_32629467_32629514	1.33013	Rfx3_Rfx1_Rfx4	ENSMUST00000068271.4|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr2_-_134644079_134644109	1.32693	Rfx3_Rfx1_Rfx4	ENSMUST00000110119.1|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr9_-_24503127_24503197	1.31462	Rfx3_Rfx1_Rfx4	ENSMUST00000142064.1|Dpy19l1|ENSMUSG00000043067.9|dpy-19-like 1 (C. elegans) 	ENSMUST00000170356.1|Dpy19l1|ENSMUSG00000043067.9|dpy-19-like 1 (C. elegans)
mm10_v2_chr5_+_30711849_30711905	1.30479	Rfx3_Rfx1_Rfx4	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr3_+_156561950_156561993	1.2947	Rfx3_Rfx1_Rfx4	ENSMUST00000041425.5|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1 	ENSMUST00000106065.1|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr18_+_23803962_23804054	1.28257	Rfx3_Rfx1_Rfx4	ENSMUST00000025127.3|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr3_-_146770603_146770781	1.27547	Rfx3_Rfx1_Rfx4	ENSMUST00000106138.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr2_-_25580099_25580099	1.26623	Rfx3_Rfx1_Rfx4	ENSMUST00000114217.1|Gm996|ENSMUSG00000029419.7|predicted gene 996
mm10_v2_chr5_+_137758133_137758213	1.26438	Rfx3_Rfx1_Rfx4	ENSMUST00000141733.1|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4 	ENSMUST00000110985.1|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4
mm10_v2_chr17_+_46248069_46248139	1.26092	Rfx3_Rfx1_Rfx4	ENSMUST00000095263.3|Yipf3|ENSMUSG00000071074.3|Yip1 domain family, member 3 	ENSMUST00000123311.1|Yipf3|ENSMUSG00000071074.3|Yip1 domain family, member 3
mm10_v2_chr14_+_77156733_77156823	1.25841	Rfx3_Rfx1_Rfx4	ENSMUST00000022589.7|Enox1|ENSMUSG00000022012.8|ecto-NOX disulfide-thiol exchanger 1
mm10_v2_chr8_+_85060055_85060135	1.25141	Rfx3_Rfx1_Rfx4	ENSMUST00000095220.3|Fbxw9|ENSMUSG00000008167.8|F-box and WD-40 domain protein 9
mm10_v2_chr2_+_118663235_118663309	1.23717	Rfx3_Rfx1_Rfx4	ENSMUST00000099557.3|Pak6|ENSMUSG00000074923.4|p21 protein (Cdc42/Rac)-activated kinase 6
mm10_v2_chr18_-_43687695_43687773	1.23716	Rfx3_Rfx1_Rfx4	ENSMUST00000082254.6|Jakmip2|ENSMUSG00000024502.9|janus kinase and microtubule interacting protein 2
mm10_v2_chr10_+_42860348_42860377	1.23667	Rfx3_Rfx1_Rfx4	ENSMUST00000063063.7|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr14_-_118923070_118923167	1.233	Rfx3_Rfx1_Rfx4	ENSMUST00000047208.5|Dzip1|ENSMUSG00000042156.9|DAZ interacting protein 1
mm10_v2_chr15_+_100761741_100761797	1.22618	Rfx3_Rfx1_Rfx4	ENSMUST00000023776.6|Slc4a8|ENSMUSG00000023032.6|solute carrier family 4 (anion exchanger), member 8
mm10_v2_chr15_-_33687840_33687883	1.21128	Rfx3_Rfx1_Rfx4	ENSMUST00000042021.3|Tspyl5|ENSMUSG00000038984.3|testis-specific protein, Y-encoded-like 5
mm10_v2_chr17_+_24696234_24696320	1.20708	Rfx3_Rfx1_Rfx4	ENSMUST00000019464.7|Noxo1|ENSMUSG00000019320.7|NADPH oxidase organizer 1
mm10_v2_chr2_-_38287347_38287394	1.20572	Rfx3_Rfx1_Rfx4	ENSMUST00000102787.3|Dennd1a|ENSMUSG00000035392.11|DENN/MADD domain containing 1A
mm10_v2_chr5_-_137531204_137531297	1.18413	Rfx3_Rfx1_Rfx4	ENSMUST00000150063.2|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr13_+_43615950_43615991	1.17386	Rfx3_Rfx1_Rfx4	ENSMUST00000161817.1|Rnf182|ENSMUSG00000044164.2|ring finger protein 182
mm10_v2_chr1_-_133921393_133921414	1.16465	Rfx3_Rfx1_Rfx4	ENSMUST00000048432.5|Prelp|ENSMUSG00000041577.5|proline arginine-rich end leucine-rich repeat
mm10_v2_chr11_+_101552188_101552234	1.15909	Rfx3_Rfx1_Rfx4	ENSMUST00000147239.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1
mm10_v2_chr12_+_113185877_113185937	1.15235	Rfx3_Rfx1_Rfx4	ENSMUST00000058491.6|Tmem121|ENSMUSG00000049036.6|transmembrane protein 121
mm10_v2_chr4_+_117550326_117550409	1.15181	Rfx3_Rfx1_Rfx4	ENSMUST00000037127.8|Eri3|ENSMUSG00000033423.10|exoribonuclease 3
mm10_v2_chr9_-_50739365_50739517	1.14491	Rfx3_Rfx1_Rfx4	ENSMUST00000117093.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000121634.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr9_+_62858085_62858138	1.13907	Rfx3_Rfx1_Rfx4	ENSMUST00000034777.6|Calml4|ENSMUSG00000032246.7|calmodulin-like 4 	ENSMUST00000163820.1|Calml4|ENSMUSG00000032246.7|calmodulin-like 4
mm10_v2_chr9_-_29412204_29412277	1.12857	Rfx3_Rfx1_Rfx4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr7_-_44553901_44553955	1.12671	Rfx3_Rfx1_Rfx4	ENSMUST00000107910.1|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2 	ENSMUST00000167197.1|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2 	ENSMUST00000107911.1|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2 	ENSMUST00000073488.5|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2
mm10_v2_chr10_-_42018363_42018436	1.12328	Rfx3_Rfx1_Rfx4	ENSMUST00000162405.1|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2 	ENSMUST00000095729.4|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2 	ENSMUST00000161081.1|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2 	ENSMUST00000160262.2|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2
mm10_v2_chr2_-_75938407_75938462	1.11953	Rfx3_Rfx1_Rfx4	ENSMUST00000099996.3|Ttc30b|ENSMUSG00000075273.3|tetratricopeptide repeat domain 30B
mm10_v2_chr6_+_34780836_34780905	1.11495	Rfx3_Rfx1_Rfx4	ENSMUST00000115012.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3 	ENSMUST00000115014.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3 	ENSMUST00000115009.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3
mm10_v2_chr5_+_123252087_123252136	1.11211	Rfx3_Rfx1_Rfx4	ENSMUST00000121964.1|Wdr66|ENSMUSG00000029442.12|WD repeat domain 66
mm10_v2_chr18_+_35965036_35965087	1.1043	Rfx3_Rfx1_Rfx4	ENSMUST00000176873.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2 	ENSMUST00000177432.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr10_-_81407641_81407683	1.09993	Rfx3_Rfx1_Rfx4	ENSMUST00000140916.1|Nfic|ENSMUSG00000055053.11|nuclear factor I/C
mm10_v2_chr16_+_3908801_3909031	1.09618	Rfx3_Rfx1_Rfx4	ENSMUST00000145150.2|Cluap1|ENSMUSG00000014232.8|clusterin associated protein 1 	ENSMUST00000040881.7|Cluap1|ENSMUSG00000014232.8|clusterin associated protein 1
mm10_v2_chr10_-_81060134_81060204	1.09112	Rfx3_Rfx1_Rfx4	ENSMUST00000005067.5|Sgta|ENSMUSG00000004937.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm10_v2_chr2_-_167492826_167492891	1.08919	Rfx3_Rfx1_Rfx4	ENSMUST00000109211.2|Spata2|ENSMUSG00000047030.9|spermatogenesis associated 2 	ENSMUST00000057627.9|Spata2|ENSMUSG00000047030.9|spermatogenesis associated 2
mm10_v2_chr3_-_127225847_127225915	1.08096	Rfx3_Rfx1_Rfx4	ENSMUST00000182726.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182779.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr10_+_62980233_62980262	1.07734	Rfx3_Rfx1_Rfx4	ENSMUST00000131718.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000119567.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000122231.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2
mm10_v2_chr4_+_110397764_110397808	1.06986	Rfx3_Rfx1_Rfx4	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr17_-_85090204_85090275	1.06372	Rfx3_Rfx1_Rfx4	ENSMUST00000072406.3|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like 	ENSMUST00000171795.1|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like
mm10_v2_chr2_-_21205342_21205371	1.06134	Rfx3_Rfx1_Rfx4	ENSMUST00000027992.2|Enkur|ENSMUSG00000026679.3|enkurin, TRPC channel interacting protein
mm10_v2_chr11_+_101425068_101425114	1.0578	Rfx3_Rfx1_Rfx4	ENSMUST00000040561.5|Rundc1|ENSMUSG00000035007.5|RUN domain containing 1
mm10_v2_chr12_+_84409039_84409102	1.05531	Rfx3_Rfx1_Rfx4	ENSMUST00000081828.6|Ccdc176|ENSMUSG00000057265.6|coiled-coil domain containing 176
mm10_v2_chr8_-_123212742_123212779	1.03996	Rfx3_Rfx1_Rfx4	ENSMUST00000000759.8|Chmp1a|ENSMUSG00000000743.8|charged multivesicular body protein 1A
mm10_v2_chr14_+_55094835_55094835	1.02919	Rfx3_Rfx1_Rfx4	ENSMUST00000050575.7|Thtpa|ENSMUSG00000045691.7|thiamine triphosphatase
mm10_v2_chr11_-_69413675_69413675	1.02215	Rfx3_Rfx1_Rfx4	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chr15_+_79229140_79229173	1.01817	Rfx3_Rfx1_Rfx4	ENSMUST00000163571.1|Pick1|ENSMUSG00000068206.6|protein interacting with C kinase 1
mm10_v2_chr18_+_35965088_35965110	1.01753	Rfx3_Rfx1_Rfx4	ENSMUST00000175734.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr2_+_71981184_71981287	1.00565	Rfx3_Rfx1_Rfx4	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr5_+_118027743_118027800	1.00557	Rfx3_Rfx1_Rfx4	ENSMUST00000031304.7|Tesc|ENSMUSG00000029359.7|tescalcin
mm10_v2_chr8_+_41239718_41239767	0.995831	Rfx3_Rfx1_Rfx4	ENSMUST00000045218.7|Pcm1|ENSMUSG00000031592.9|pericentriolar material 1
mm10_v2_chr15_-_79658749_79658798	0.988227	Rfx3_Rfx1_Rfx4	ENSMUST00000109646.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr10_+_81606883_81607025	0.985757	Rfx3_Rfx1_Rfx4	ENSMUST00000119753.1|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920 	ENSMUST00000121138.1|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920 	ENSMUST00000099442.3|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920
mm10_v2_chr3_+_156561792_156561869	0.980528	Rfx3_Rfx1_Rfx4	ENSMUST00000074015.4|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr3_-_155093346_155093385	0.975073	Rfx3_Rfx1_Rfx4	ENSMUST00000066568.4|Fpgt|ENSMUSG00000053870.6|fucose-1-phosphate guanylyltransferase
mm10_v2_chr12_+_72536342_72536396	0.973143	Rfx3_Rfx1_Rfx4	ENSMUST00000044352.6|Pcnxl4|ENSMUSG00000034501.6|pecanex-like 4 (Drosophila)
mm10_v2_chr18_-_46198810_46198824	0.969846	Rfx3_Rfx1_Rfx4	ENSMUST00000167364.1|Trim36|ENSMUSG00000033949.5|tripartite motif-containing 36
mm10_v2_chr2_-_36049365_36049406	0.968576	Rfx3_Rfx1_Rfx4	ENSMUST00000070112.5|Ndufa8|ENSMUSG00000026895.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8
mm10_v2_chr5_-_45856496_45856552	0.967649	Rfx3_Rfx1_Rfx4	ENSMUST00000087164.3|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like 	ENSMUST00000121573.1|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like
mm10_v2_chr13_-_100104064_100104082	0.965664	Rfx3_Rfx1_Rfx4	ENSMUST00000038104.5|Bdp1|ENSMUSG00000049658.7|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
mm10_v2_chr2_-_131174653_131174653	0.96443	Rfx3_Rfx1_Rfx4	ENSMUST00000127987.1|Spef1|ENSMUSG00000027329.3|sperm flagellar 1
mm10_v2_chr9_-_60688118_60688184	0.961082	Rfx3_Rfx1_Rfx4	ENSMUST00000114034.2|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000065603.5|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr5_+_66260121_66260312	0.956724	Rfx3_Rfx1_Rfx4	ENSMUST00000031109.3|Nsun7|ENSMUSG00000029206.7|NOL1/NOP2/Sun domain family, member 7 	ENSMUST00000113720.1|Nsun7|ENSMUSG00000029206.7|NOL1/NOP2/Sun domain family, member 7
mm10_v2_chr6_-_39725448_39725478	0.953083	Rfx3_Rfx1_Rfx4	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr2_+_164460945_164461018	0.939172	Rfx3_Rfx1_Rfx4	ENSMUST00000072452.4|Sys1|ENSMUSG00000045503.10|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm10_v2_chr12_-_110682606_110682623	0.925863	Rfx3_Rfx1_Rfx4	ENSMUST00000070659.5|1700001K19Rik|ENSMUSG00000056508.5|RIKEN cDNA 1700001K19 gene
mm10_v2_chr12_-_55821157_55821195	0.92428	Rfx3_Rfx1_Rfx4	ENSMUST00000110687.1|Ralgapa1|ENSMUSG00000021027.9|Ral GTPase activating protein, alpha subunit 1 	ENSMUST00000085385.5|Ralgapa1|ENSMUSG00000021027.9|Ral GTPase activating protein, alpha subunit 1
mm10_v2_chr1_-_172329261_172329307	0.913642	Rfx3_Rfx1_Rfx4	ENSMUST00000062387.2|Kcnj9|ENSMUSG00000038026.7|potassium inwardly-rectifying channel, subfamily J, member 9
mm10_v2_chr12_+_71048338_71048356	0.900142	Rfx3_Rfx1_Rfx4	ENSMUST00000135709.1|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr2_-_79428891_79428990	0.8964	Rfx3_Rfx1_Rfx4	ENSMUST00000143974.1|Cerkl|ENSMUSG00000075256.3|ceramide kinase-like
mm10_v2_chr19_-_10304867_10304954	0.894327	Rfx3_Rfx1_Rfx4	ENSMUST00000039327.4|Dagla|ENSMUSG00000035735.4|diacylglycerol lipase, alpha
mm10_v2_chr9_+_59578192_59578337	0.883744	Rfx3_Rfx1_Rfx4	ENSMUST00000118549.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000034840.3|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr2_+_145934800_145934816	0.882621	Rfx3_Rfx1_Rfx4	ENSMUST00000138774.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene 	ENSMUST00000152515.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene 	ENSMUST00000130168.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene 	ENSMUST00000133433.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene 	ENSMUST00000118002.1|4930529M08Rik|ENSMUSG00000037143.11|RIKEN cDNA 4930529M08 gene
mm10_v2_chr11_+_83302817_83302952	0.870705	Rfx3_Rfx1_Rfx4	ENSMUST00000142680.1|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit
mm10_v2_chr8_+_66386292_66386308	0.870103	Rfx3_Rfx1_Rfx4	ENSMUST00000039540.5|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110253.2|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr3_-_126998408_126998463	0.863801	Rfx3_Rfx1_Rfx4	ENSMUST00000182764.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000044443.8|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr7_+_16738410_16738476	0.862892	Rfx3_Rfx1_Rfx4	ENSMUST00000086112.6|Ap2s1|ENSMUSG00000008036.10|adaptor-related protein complex 2, sigma 1 subunit
mm10_v2_chr17_+_88440711_88440741	0.860765	Rfx3_Rfx1_Rfx4	ENSMUST00000112238.2|Foxn2|ENSMUSG00000034998.12|forkhead box N2 	ENSMUST00000155640.1|Foxn2|ENSMUSG00000034998.12|forkhead box N2
mm10_v2_chr1_+_59119822_59119861	0.858315	Rfx3_Rfx1_Rfx4	ENSMUST00000180570.1|G730003C15Rik|ENSMUSG00000097573.1|RIKEN cDNA G730003C15 gene
mm10_v2_chr6_-_83125029_83125135	0.855609	Rfx3_Rfx1_Rfx4	ENSMUST00000032109.4|Ino80b|ENSMUSG00000030034.5|INO80 complex subunit B
mm10_v2_chr5_+_124112297_124112351	0.852732	Rfx3_Rfx1_Rfx4	ENSMUST00000024470.6|Ogfod2|ENSMUSG00000023707.7|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENSMUST00000119269.1|Ogfod2|ENSMUSG00000023707.7|2-oxoglutarate and iron-dependent oxygenase domain containing 2
mm10_v2_chr2_-_134644125_134644145	0.851886	Rfx3_Rfx1_Rfx4	ENSMUST00000038228.4|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr8_-_119575143_119575205	0.844817	Rfx3_Rfx1_Rfx4	ENSMUST00000036049.4|Hsdl1|ENSMUSG00000034189.4|hydroxysteroid dehydrogenase like 1
mm10_v2_chr1_+_152766540_152766551	0.840805	Rfx3_Rfx1_Rfx4	ENSMUST00000077755.5|Arpc5|ENSMUSG00000008475.7|actin related protein 2/3 complex, subunit 5 	ENSMUST00000097536.4|Arpc5|ENSMUSG00000008475.7|actin related protein 2/3 complex, subunit 5
mm10_v2_chr7_+_139894696_139894854	0.83867	Rfx3_Rfx1_Rfx4	ENSMUST00000151421.1|Kndc1|ENSMUSG00000066129.8|kinase non-catalytic C-lobe domain (KIND) containing 1 	ENSMUST00000053445.9|Kndc1|ENSMUSG00000066129.8|kinase non-catalytic C-lobe domain (KIND) containing 1 	ENSMUST00000121839.1|Kndc1|ENSMUSG00000066129.8|kinase non-catalytic C-lobe domain (KIND) containing 1
mm10_v2_chr10_-_13868779_13868874	0.837643	Rfx3_Rfx1_Rfx4	ENSMUST00000105534.3|Aig1|ENSMUSG00000019806.7|androgen-induced 1
mm10_v2_chr15_-_84557776_84557875	0.836676	Rfx3_Rfx1_Rfx4	ENSMUST00000069476.4|Ldoc1l|ENSMUSG00000055745.4|leucine zipper, down-regulated in cancer 1-like
mm10_v2_chr4_-_40722307_40722398	0.836512	Rfx3_Rfx1_Rfx4	ENSMUST00000181475.1|Gm6297|ENSMUSG00000097123.1|predicted gene 6297
mm10_v2_chr15_+_79229363_79229439	0.834071	Rfx3_Rfx1_Rfx4	ENSMUST00000018295.7|Pick1|ENSMUSG00000068206.6|protein interacting with C kinase 1 	ENSMUST00000053926.5|Pick1|ENSMUSG00000068206.6|protein interacting with C kinase 1
mm10_v2_chr12_-_64965496_64965538	0.819483	Rfx3_Rfx1_Rfx4	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr11_-_62731865_62731910	0.815697	Rfx3_Rfx1_Rfx4	ENSMUST00000150336.1|Zfp287|ENSMUSG00000005267.7|zinc finger protein 287
mm10_v2_chr9_-_64341145_64341257	0.790657	Rfx3_Rfx1_Rfx4	ENSMUST00000120760.1|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like 	ENSMUST00000168844.2|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like
mm10_v2_chrX_+_136590841_136590866	0.787994	Rfx3_Rfx1_Rfx4	ENSMUST00000138047.1|Tceal3|ENSMUSG00000044550.5|transcription elongation factor A (SII)-like 3 	ENSMUST00000145648.1|Tceal3|ENSMUSG00000044550.5|transcription elongation factor A (SII)-like 3
mm10_v2_chr3_-_146770218_146770261	0.782896	Rfx3_Rfx1_Rfx4	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr2_-_168601620_168601657	0.782166	Rfx3_Rfx1_Rfx4	ENSMUST00000171689.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 	ENSMUST00000137451.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm10_v2_chr13_+_24845122_24845186	0.782086	Rfx3_Rfx1_Rfx4	ENSMUST00000006893.8|D130043K22Rik|ENSMUSG00000006711.9|RIKEN cDNA D130043K22 gene
mm10_v2_chr17_+_88530113_88530142	0.776646	Rfx3_Rfx1_Rfx4	ENSMUST00000038551.6|Ppp1r21|ENSMUSG00000034709.7|protein phosphatase 1, regulatory subunit 21
mm10_v2_chr15_+_54745702_54745702	0.775813	Rfx3_Rfx1_Rfx4	ENSMUST00000050027.8|Nov|ENSMUSG00000037362.8|nephroblastoma overexpressed gene
mm10_v2_chr12_+_73997749_73997817	0.772683	Rfx3_Rfx1_Rfx4	ENSMUST00000110451.2|Syt16|ENSMUSG00000044912.9|synaptotagmin XVI
mm10_v2_chr11_+_109650921_109651003	0.772519	Rfx3_Rfx1_Rfx4	ENSMUST00000049527.6|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chr6_+_34780412_34780467	0.76911	Rfx3_Rfx1_Rfx4	ENSMUST00000115016.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3 	ENSMUST00000115017.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3
mm10_v2_chrX_+_48623737_48623790	0.768841	Rfx3_Rfx1_Rfx4	ENSMUST00000114936.1|Slc25a14|ENSMUSG00000031105.10|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm10_v2_chr16_+_43889800_43889820	0.766037	Rfx3_Rfx1_Rfx4	ENSMUST00000132859.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr19_-_6942406_6942450	0.765877	Rfx3_Rfx1_Rfx4	ENSMUST00000099782.3|Gpr137|ENSMUSG00000024958.6|G protein-coupled receptor 137
mm10_v2_chr17_-_46144156_46144218	0.761266	Rfx3_Rfx1_Rfx4	ENSMUST00000024762.2|Rsph9|ENSMUSG00000023966.2|radial spoke head 9 homolog (Chlamydomonas)
mm10_v2_chr9_+_110476985_110476999	0.7611	Rfx3_Rfx1_Rfx4	ENSMUST00000084948.4|Kif9|ENSMUSG00000032489.11|kinesin family member 9 	ENSMUST00000061155.6|Kif9|ENSMUSG00000032489.11|kinesin family member 9 	ENSMUST00000140686.1|Kif9|ENSMUSG00000032489.11|kinesin family member 9 	ENSMUST00000084952.5|Kif9|ENSMUSG00000032489.11|kinesin family member 9
mm10_v2_chr5_+_29195983_29196032	0.759075	Rfx3_Rfx1_Rfx4	ENSMUST00000160888.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000159272.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000001247.5|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000161398.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000160246.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32
mm10_v2_chr4_-_41723129_41723179	0.75534	Rfx3_Rfx1_Rfx4	ENSMUST00000171641.1|Dctn3|ENSMUSG00000028447.5|dynactin 3 	ENSMUST00000030158.4|Dctn3|ENSMUSG00000028447.5|dynactin 3
mm10_v2_chr3_-_127225917_127225959	0.739143	Rfx3_Rfx1_Rfx4	ENSMUST00000182064.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182662.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr6_+_119175247_119175292	0.738718	Rfx3_Rfx1_Rfx4	ENSMUST00000112777.2|Dcp1b|ENSMUSG00000041477.8|DCP1 decapping enzyme homolog B (S. cerevisiae) 	ENSMUST00000073909.5|Dcp1b|ENSMUSG00000041477.8|DCP1 decapping enzyme homolog B (S. cerevisiae)
mm10_v2_chr4_+_53631460_53631505	0.736733	Rfx3_Rfx1_Rfx4	ENSMUST00000179534.1|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like 	ENSMUST00000132151.1|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like
mm10_v2_chr9_-_110476637_110476694	0.732526	Rfx3_Rfx1_Rfx4	ENSMUST00000111934.1|Klhl18|ENSMUSG00000054792.9|kelch-like 18 	ENSMUST00000068025.6|Klhl18|ENSMUSG00000054792.9|kelch-like 18
mm10_v2_chr16_+_78301673_78301760	0.731702	Rfx3_Rfx1_Rfx4	ENSMUST00000114229.2|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr12_+_5411641_5411641	0.720014	Rfx3_Rfx1_Rfx4	ENSMUST00000163627.1|2810032G03Rik|ENSMUSG00000037735.6|RIKEN cDNA 2810032G03 gene
mm10_v2_chr15_-_79062866_79062941	0.718874	Rfx3_Rfx1_Rfx4	ENSMUST00000151889.1|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54 	ENSMUST00000040676.4|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54
mm10_v2_chr15_-_98953541_98953560	0.708488	Rfx3_Rfx1_Rfx4	ENSMUST00000097014.5|Tuba1a|ENSMUSG00000072235.5|tubulin, alpha 1A
mm10_v2_chr17_-_34603675_34603702	0.706593	Rfx3_Rfx1_Rfx4	ENSMUST00000015622.7|Rnf5|ENSMUSG00000015478.7|ring finger protein 5
mm10_v2_chr8_+_120488416_120488490	0.69574	Rfx3_Rfx1_Rfx4	ENSMUST00000034279.9|Gse1|ENSMUSG00000031822.12|genetic suppressor element 1
mm10_v2_chr1_+_180109192_180109265	0.683226	Rfx3_Rfx1_Rfx4	ENSMUST00000143176.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000135056.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr12_+_35047180_35047230	0.681383	Rfx3_Rfx1_Rfx4	ENSMUST00000048519.9|Snx13|ENSMUSG00000020590.9|sorting nexin 13 	ENSMUST00000163677.1|Snx13|ENSMUSG00000020590.9|sorting nexin 13
mm10_v2_chr16_-_4964168_4964237	0.681244	Rfx3_Rfx1_Rfx4	ENSMUST00000023157.4|Anks3|ENSMUSG00000022515.5|ankyrin repeat and sterile alpha motif domain containing 3
mm10_v2_chr7_+_51621830_51621891	0.678679	Rfx3_Rfx1_Rfx4	ENSMUST00000032710.5|Slc17a6|ENSMUSG00000030500.5|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm10_v2_chr19_-_57197435_57197460	0.675835	Rfx3_Rfx1_Rfx4	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr7_-_92669917_92669943	0.672031	Rfx3_Rfx1_Rfx4	ENSMUST00000119954.1|Pcf11|ENSMUSG00000041328.9|cleavage and polyadenylation factor subunit homolog (S. cerevisiae)
mm10_v2_chr17_+_27685197_27685233	0.662768	Rfx3_Rfx1_Rfx4	ENSMUST00000097360.2|Pacsin1|ENSMUSG00000040276.8|protein kinase C and casein kinase substrate in neurons 1
mm10_v2_chr19_-_57197556_57197631	0.660378	Rfx3_Rfx1_Rfx4	ENSMUST00000099294.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr8_+_45627709_45627803	0.65659	Rfx3_Rfx1_Rfx4	ENSMUST00000134321.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000135336.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr2_-_131175201_131175201	0.65415	Rfx3_Rfx1_Rfx4	ENSMUST00000110218.2|Spef1|ENSMUSG00000027329.3|sperm flagellar 1
mm10_v2_chr5_-_142550965_142551110	0.653638	Rfx3_Rfx1_Rfx4	ENSMUST00000129212.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000110785.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000063635.8|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr7_+_67222544_67222635	0.650784	Rfx3_Rfx1_Rfx4	ENSMUST00000058771.5|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4 	ENSMUST00000179106.1|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4
mm10_v2_chr5_-_114823460_114823475	0.646004	Rfx3_Rfx1_Rfx4	ENSMUST00000140374.1|Gm20499|ENSMUSG00000092252.1|predicted gene 20499 	ENSMUST00000100850.4|2610524H06Rik|ENSMUSG00000092486.1|RIKEN cDNA 2610524H06 gene
mm10_v2_chr10_-_89732253_89732324	0.645132	Rfx3_Rfx1_Rfx4	ENSMUST00000020109.3|Actr6|ENSMUSG00000019948.3|ARP6 actin-related protein 6
mm10_v2_chr10_-_13868932_13869004	0.6425	Rfx3_Rfx1_Rfx4	ENSMUST00000019942.5|Aig1|ENSMUSG00000019806.7|androgen-induced 1 	ENSMUST00000162610.1|Aig1|ENSMUSG00000019806.7|androgen-induced 1
mm10_v2_chr15_+_36179530_36179701	0.64058	Rfx3_Rfx1_Rfx4	ENSMUST00000171205.1|Spag1|ENSMUSG00000037617.5|sperm associated antigen 1
mm10_v2_chr11_+_83302641_83302803	0.63561	Rfx3_Rfx1_Rfx4	ENSMUST00000176430.1|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit 	ENSMUST00000065692.7|Ap2b1|ENSMUSG00000035152.8|adaptor-related protein complex 2, beta 1 subunit
mm10_v2_chr7_+_18991245_18991319	0.634299	Rfx3_Rfx1_Rfx4	ENSMUST00000130268.1|Mypop|ENSMUSG00000048481.9|Myb-related transcription factor, partner of profilin 	ENSMUST00000059331.8|Mypop|ENSMUSG00000048481.9|Myb-related transcription factor, partner of profilin 	ENSMUST00000131087.1|Mypop|ENSMUSG00000048481.9|Myb-related transcription factor, partner of profilin
mm10_v2_chr7_-_68749170_68749241	0.632826	Rfx3_Rfx1_Rfx4	ENSMUST00000118110.1|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4 	ENSMUST00000048068.7|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4
mm10_v2_chrX_+_36195938_36195946	0.632822	Rfx3_Rfx1_Rfx4	ENSMUST00000048067.3|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr9_+_108569885_108569943	0.629664	Rfx3_Rfx1_Rfx4	ENSMUST00000019183.8|Dalrd3|ENSMUSG00000019039.8|DALR anticodon binding domain containing 3
mm10_v2_chr8_-_40308331_40308331	0.627533	Rfx3_Rfx1_Rfx4	ENSMUST00000118639.1|Fgf20|ENSMUSG00000031603.8|fibroblast growth factor 20
mm10_v2_chr12_+_113140198_113140257	0.618987	Rfx3_Rfx1_Rfx4	ENSMUST00000084882.4|Crip2|ENSMUSG00000006356.6|cysteine rich protein 2
mm10_v2_chr6_+_38433913_38433965	0.617478	Rfx3_Rfx1_Rfx4	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chrX_+_36195950_36195959	0.616209	Rfx3_Rfx1_Rfx4	ENSMUST00000115257.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr10_+_81606303_81606303	0.614265	Rfx3_Rfx1_Rfx4	ENSMUST00000119492.1|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920
mm10_v2_chr8_-_25597459_25597517	0.611974	Rfx3_Rfx1_Rfx4	ENSMUST00000079160.6|Letm2|ENSMUSG00000037363.8|leucine zipper-EF-hand containing transmembrane protein 2
mm10_v2_chr16_-_43979050_43979093	0.610963	Rfx3_Rfx1_Rfx4	ENSMUST00000165648.1|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23 	ENSMUST00000036321.7|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23
mm10_v2_chr5_-_124187150_124187225	0.60818	Rfx3_Rfx1_Rfx4	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr1_-_172258410_172258438	0.605537	Rfx3_Rfx1_Rfx4	ENSMUST00000111243.1|Atp1a4|ENSMUSG00000007107.5|ATPase, Na+/K+ transporting, alpha 4 polypeptide
mm10_v2_chr4_-_43653542_43653557	0.604655	Rfx3_Rfx1_Rfx4	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr11_+_72689997_72690015	0.600315	Rfx3_Rfx1_Rfx4	ENSMUST00000155998.1|Ankfy1|ENSMUSG00000020790.8|ankyrin repeat and FYVE domain containing 1
mm10_v2_chr2_+_109280738_109280798	0.596975	Rfx3_Rfx1_Rfx4	ENSMUST00000028527.7|Kif18a|ENSMUSG00000027115.8|kinesin family member 18A
mm10_v2_chr5_+_66259890_66259912	0.595512	Rfx3_Rfx1_Rfx4	ENSMUST00000065530.6|Nsun7|ENSMUSG00000029206.7|NOL1/NOP2/Sun domain family, member 7
mm10_v2_chr5_-_137530990_137531049	0.594826	Rfx3_Rfx1_Rfx4	ENSMUST00000132525.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr18_+_64887690_64887762	0.594584	Rfx3_Rfx1_Rfx4	ENSMUST00000163516.1|Nedd4l|ENSMUSG00000024589.9|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm10_v2_chr9_-_14771004_14771044	0.594507	Rfx3_Rfx1_Rfx4	ENSMUST00000060330.3|1700012B09Rik|ENSMUSG00000031927.3|RIKEN cDNA 1700012B09 gene
mm10_v2_chr7_+_60155538_60155538	0.593816	Rfx3_Rfx1_Rfx4	ENSMUST00000057611.4|Gm7367|ENSMUSG00000047370.4|predicted pseudogene 7367
mm10_v2_chr19_-_57197377_57197417	0.589387	Rfx3_Rfx1_Rfx4	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr10_-_62578387_62578457	0.589379	Rfx3_Rfx1_Rfx4	ENSMUST00000162525.1|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene 	ENSMUST00000159704.1|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene 	ENSMUST00000162759.1|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene 	ENSMUST00000065887.7|2510003E04Rik|ENSMUSG00000036955.9|RIKEN cDNA 2510003E04 gene
mm10_v2_chrX_+_36195904_36195932	0.584805	Rfx3_Rfx1_Rfx4	ENSMUST00000115258.2|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr3_+_90062781_90062836	0.569887	Rfx3_Rfx1_Rfx4	ENSMUST00000029551.2|1700094D03Rik|ENSMUSG00000078667.2|RIKEN cDNA 1700094D03 gene
mm10_v2_chr19_-_42086338_42086375	0.568884	Rfx3_Rfx1_Rfx4	ENSMUST00000051772.8|Morn4|ENSMUSG00000049670.8|MORN repeat containing 4
mm10_v2_chr9_-_51102062_51102085	0.566962	Rfx3_Rfx1_Rfx4	ENSMUST00000170947.1|4833427G06Rik|ENSMUSG00000032057.8|RIKEN cDNA 4833427G06 gene
mm10_v2_chr16_+_43889896_43889930	0.565682	Rfx3_Rfx1_Rfx4	ENSMUST00000122014.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene 	ENSMUST00000178400.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr5_+_138171997_138172021	0.564053	Rfx3_Rfx1_Rfx4	ENSMUST00000019662.4|Ap4m1|ENSMUSG00000019518.4|adaptor-related protein complex AP-4, mu 1 	ENSMUST00000151318.1|Ap4m1|ENSMUSG00000019518.4|adaptor-related protein complex AP-4, mu 1
mm10_v2_chr11_+_52004220_52004311	0.563016	Rfx3_Rfx1_Rfx4	ENSMUST00000121591.1|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3 	ENSMUST00000063303.4|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3 	ENSMUST00000109081.2|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3 	ENSMUST00000109080.2|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3 	ENSMUST00000109079.2|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3 	ENSMUST00000109077.2|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3 	ENSMUST00000109078.1|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3 	ENSMUST00000063321.6|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3 	ENSMUST00000135076.1|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3 	ENSMUST00000120374.1|Cdkl3|ENSMUSG00000020389.12|cyclin-dependent kinase-like 3
mm10_v2_chr11_-_4160286_4160305	0.549778	Rfx3_Rfx1_Rfx4	ENSMUST00000093381.4|Ccdc157|ENSMUSG00000051427.8|coiled-coil domain containing 157 	ENSMUST00000101626.2|Ccdc157|ENSMUSG00000051427.8|coiled-coil domain containing 157
mm10_v2_chr9_+_82829806_82829834	0.543047	Rfx3_Rfx1_Rfx4	ENSMUST00000113245.2|Irak1bp1|ENSMUSG00000032251.6|interleukin-1 receptor-associated kinase 1 binding protein 1 	ENSMUST00000034783.4|Irak1bp1|ENSMUSG00000032251.6|interleukin-1 receptor-associated kinase 1 binding protein 1
mm10_v2_chr3_-_95133989_95134017	0.54032	Rfx3_Rfx1_Rfx4	ENSMUST00000172572.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1 	ENSMUST00000173462.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1
mm10_v2_chr14_+_31001414_31001464	0.53839	Rfx3_Rfx1_Rfx4	ENSMUST00000022476.7|Glt8d1|ENSMUSG00000021916.9|glycosyltransferase 8 domain containing 1
mm10_v2_chr4_-_126753372_126753440	0.533878	Rfx3_Rfx1_Rfx4	ENSMUST00000030637.7|Ncdn|ENSMUSG00000028833.7|neurochondrin 	ENSMUST00000106116.1|Ncdn|ENSMUSG00000028833.7|neurochondrin
mm10_v2_chr19_-_4283033_4283142	0.531174	Rfx3_Rfx1_Rfx4	ENSMUST00000167215.1|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D 	ENSMUST00000056888.6|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D
mm10_v2_chr16_+_3909032_3909106	0.525155	Rfx3_Rfx1_Rfx4	ENSMUST00000124849.1|Cluap1|ENSMUSG00000014232.8|clusterin associated protein 1
mm10_v2_chr17_+_6430112_6430204	0.524205	Rfx3_Rfx1_Rfx4	ENSMUST00000179569.1|Dynlt1b|ENSMUSG00000096255.1|dynein light chain Tctex-type 1B
mm10_v2_chr2_-_52742169_52742281	0.516811	Rfx3_Rfx1_Rfx4	ENSMUST00000102759.1|Stam2|ENSMUSG00000055371.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 	ENSMUST00000127316.1|Stam2|ENSMUSG00000055371.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
mm10_v2_chr15_+_36179299_36179368	0.516695	Rfx3_Rfx1_Rfx4	ENSMUST00000047348.3|Spag1|ENSMUSG00000037617.5|sperm associated antigen 1
mm10_v2_chr10_+_74967164_74967203	0.513245	Rfx3_Rfx1_Rfx4	ENSMUST00000037813.4|Gnaz|ENSMUSG00000040009.5|guanine nucleotide binding protein, alpha z subunit
mm10_v2_chr3_+_98382438_98382520	0.504178	Rfx3_Rfx1_Rfx4	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr5_+_134099704_134099760	0.498658	Rfx3_Rfx1_Rfx4	ENSMUST00000016088.8|Gatsl2|ENSMUSG00000015944.8|GATS protein-like 2
mm10_v2_chr8_+_47713266_47713266	0.498566	Rfx3_Rfx1_Rfx4	ENSMUST00000180928.1|E030037K01Rik|ENSMUSG00000097706.1|RIKEN cDNA E030037K01 gene
mm10_v2_chr14_+_31001383_31001407	0.498504	Rfx3_Rfx1_Rfx4	ENSMUST00000168584.1|Glt8d1|ENSMUSG00000021916.9|glycosyltransferase 8 domain containing 1
mm10_v2_chr19_-_57197496_57197536	0.498379	Rfx3_Rfx1_Rfx4	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr8_+_110266960_110266982	0.491972	Rfx3_Rfx1_Rfx4	ENSMUST00000043141.6|Hydin|ENSMUSG00000059854.7|HYDIN, axonemal central pair apparatus protein
mm10_v2_chr11_-_101425330_101425388	0.491878	Rfx3_Rfx1_Rfx4	ENSMUST00000103102.3|Ptges3l|ENSMUSG00000097487.1|prostaglandin E synthase 3 (cytosolic)-like
mm10_v2_chr7_+_25681158_25681158	0.48794	Rfx3_Rfx1_Rfx4	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr17_-_78937031_78937074	0.48348	Rfx3_Rfx1_Rfx4	ENSMUST00000024885.8|Cebpz|ENSMUSG00000024081.8|CCAAT/enhancer binding protein zeta
mm10_v2_chr9_-_59353430_59353508	0.483278	Rfx3_Rfx1_Rfx4	ENSMUST00000026265.6|Bbs4|ENSMUSG00000025235.7|Bardet-Biedl syndrome 4 (human)
mm10_v2_chr4_+_130107556_130107606	0.479865	Rfx3_Rfx1_Rfx4	ENSMUST00000030563.5|Pef1|ENSMUSG00000028779.10|penta-EF hand domain containing 1
mm10_v2_chr12_+_84362029_84362064	0.47749	Rfx3_Rfx1_Rfx4	ENSMUST00000110278.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast) 	ENSMUST00000145522.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chrX_+_36195968_36195993	0.471687	Rfx3_Rfx1_Rfx4	ENSMUST00000115256.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr7_-_92637079_92637147	0.471052	Rfx3_Rfx1_Rfx4	ENSMUST00000056106.7|Ankrd42|ENSMUSG00000041343.12|ankyrin repeat domain 42 	ENSMUST00000118157.1|Ankrd42|ENSMUSG00000041343.12|ankyrin repeat domain 42
mm10_v2_chr16_-_3907651_3907707	0.467824	Rfx3_Rfx1_Rfx4	ENSMUST00000177221.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene 	ENSMUST00000177323.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr16_-_91728599_91728637	0.46666	Rfx3_Rfx1_Rfx4	ENSMUST00000122254.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr7_-_79743034_79743088	0.466112	Rfx3_Rfx1_Rfx4	ENSMUST00000032761.7|Pex11a|ENSMUSG00000030545.8|peroxisomal biogenesis factor 11 alpha
mm10_v2_chr10_-_39133848_39133912	0.462469	Rfx3_Rfx1_Rfx4	ENSMUST00000134279.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000139743.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000149949.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000124941.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000125042.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000063204.2|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr3_+_98382538_98382553	0.460104	Rfx3_Rfx1_Rfx4	ENSMUST00000178372.1|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr3_+_124321031_124321113	0.455141	Rfx3_Rfx1_Rfx4	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr11_+_88047302_88047373	0.452353	Rfx3_Rfx1_Rfx4	ENSMUST00000139129.2|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr1_+_93685574_93685694	0.452044	Rfx3_Rfx1_Rfx4	ENSMUST00000027499.6|Bok|ENSMUSG00000026278.8|BCL2-related ovarian killer protein
mm10_v2_chr8_-_69890967_69890967	0.445896	Rfx3_Rfx1_Rfx4	ENSMUST00000152938.1|Yjefn3|ENSMUSG00000048967.9|YjeF N-terminal domain containing 3
mm10_v2_chrX_+_151198078_151198140	0.444763	Rfx3_Rfx1_Rfx4	ENSMUST00000184730.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000184392.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000096285.4|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3
mm10_v2_chr4_+_40722461_40722512	0.444205	Rfx3_Rfx1_Rfx4	ENSMUST00000030118.3|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1
mm10_v2_chr17_-_34850162_34850210	0.443382	Rfx3_Rfx1_Rfx4	ENSMUST00000046022.9|Skiv2l|ENSMUSG00000040356.10|superkiller viralicidic activity 2-like (S. cerevisiae)
mm10_v2_chr16_-_91728701_91728802	0.438632	Rfx3_Rfx1_Rfx4	ENSMUST00000114023.2|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1 	ENSMUST00000117644.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr18_+_77185979_77186048	0.438489	Rfx3_Rfx1_Rfx4	ENSMUST00000075290.6|St8sia5|ENSMUSG00000025425.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm10_v2_chr7_-_43313233_43313285	0.433643	Rfx3_Rfx1_Rfx4	ENSMUST00000012796.7|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715 	ENSMUST00000107986.2|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715
mm10_v2_chr12_+_84361968_84362018	0.432663	Rfx3_Rfx1_Rfx4	ENSMUST00000021661.6|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr10_+_39732099_39732140	0.4323	Rfx3_Rfx1_Rfx4	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr5_-_123749393_123749418	0.431808	Rfx3_Rfx1_Rfx4	ENSMUST00000057795.5|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000111515.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000182309.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2
mm10_v2_chr7_+_3303503_3303565	0.431038	Rfx3_Rfx1_Rfx4	ENSMUST00000100301.4|Prkcg|ENSMUSG00000078816.3|protein kinase C, gamma
mm10_v2_chr16_+_43889936_43889947	0.430243	Rfx3_Rfx1_Rfx4	ENSMUST00000151183.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr5_+_3571664_3571673	0.430232	Rfx3_Rfx1_Rfx4	ENSMUST00000008451.5|1700109H08Rik|ENSMUSG00000008307.5|RIKEN cDNA 1700109H08 gene
mm10_v2_chr10_+_58255465_58255539	0.424289	Rfx3_Rfx1_Rfx4	ENSMUST00000057659.7|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2 	ENSMUST00000162041.1|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2 	ENSMUST00000162860.1|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2
mm10_v2_chr10_+_119992916_119992958	0.42267	Rfx3_Rfx1_Rfx4	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr4_-_43653560_43653594	0.422622	Rfx3_Rfx1_Rfx4	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr9_-_109059216_109059259	0.42183	Rfx3_Rfx1_Rfx4	ENSMUST00000112053.1|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr10_-_82690608_82690650	0.421699	Rfx3_Rfx1_Rfx4	ENSMUST00000065815.6|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2 	ENSMUST00000020485.3|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2
mm10_v2_chr9_-_105395237_105395289	0.421509	Rfx3_Rfx1_Rfx4	ENSMUST00000140851.1|Nek11|ENSMUSG00000035032.5|NIMA (never in mitosis gene a)-related expressed kinase 11
mm10_v2_chr2_-_145935014_145935014	0.419409	Rfx3_Rfx1_Rfx4	ENSMUST00000001818.4|Crnkl1|ENSMUSG00000001767.5|Crn, crooked neck-like 1 (Drosophila)
mm10_v2_chr7_-_30232186_30232272	0.417285	Rfx3_Rfx1_Rfx4	ENSMUST00000006254.5|Tbcb|ENSMUSG00000006095.6|tubulin folding cofactor B
mm10_v2_chr8_+_95534078_95534123	0.415011	Rfx3_Rfx1_Rfx4	ENSMUST00000041569.3|Ccdc113|ENSMUSG00000036598.3|coiled-coil domain containing 113
mm10_v2_chr14_+_60378242_60378292	0.409796	Rfx3_Rfx1_Rfx4	ENSMUST00000022561.6|Amer2|ENSMUSG00000021986.7|APC membrane recruitment 2
mm10_v2_chr7_-_118705708_118705786	0.408071	Rfx3_Rfx1_Rfx4	ENSMUST00000038791.8|Gde1|ENSMUSG00000033917.8|glycerophosphodiester phosphodiesterase 1
mm10_v2_chr2_-_73775341_73775378	0.407908	Rfx3_Rfx1_Rfx4	ENSMUST00000112024.3|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000166199.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000180045.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chrX_+_153359613_153359613	0.406738	Rfx3_Rfx1_Rfx4	ENSMUST00000039545.4|Klf8|ENSMUSG00000041649.7|Kruppel-like factor 8
mm10_v2_chr8_+_122611618_122611663	0.406513	Rfx3_Rfx1_Rfx4	ENSMUST00000015157.8|Trappc2l|ENSMUSG00000015013.8|trafficking protein particle complex 2-like
mm10_v2_chr5_-_123749371_123749391	0.404905	Rfx3_Rfx1_Rfx4	ENSMUST00000182955.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000182489.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000050827.7|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2
mm10_v2_chr3_+_118433797_118433966	0.398954	Rfx3_Rfx1_Rfx4	ENSMUST00000180593.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181926.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181060.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871 	ENSMUST00000181310.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871
mm10_v2_chr6_+_65042575_65042667	0.395143	Rfx3_Rfx1_Rfx4	ENSMUST00000031984.6|Smarcad1|ENSMUSG00000029920.7|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm10_v2_chr10_-_39133914_39133927	0.391377	Rfx3_Rfx1_Rfx4	ENSMUST00000135785.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr18_+_77185815_77185879	0.39017	Rfx3_Rfx1_Rfx4	ENSMUST00000079618.4|St8sia5|ENSMUSG00000025425.11|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm10_v2_chr15_+_30172570_30172600	0.386587	Rfx3_Rfx1_Rfx4	ENSMUST00000081728.5|Ctnnd2|ENSMUSG00000022240.9|catenin (cadherin associated protein), delta 2
mm10_v2_chr7_+_139834148_139834174	0.386545	Rfx3_Rfx1_Rfx4	ENSMUST00000026548.7|Gpr123|ENSMUSG00000025475.11|G protein-coupled receptor 123
mm10_v2_chr9_-_122950922_122950953	0.386391	Rfx3_Rfx1_Rfx4	ENSMUST00000118422.1|1110059G10Rik|ENSMUSG00000032551.6|RIKEN cDNA 1110059G10 gene
mm10_v2_chr9_-_109059711_109059771	0.383771	Rfx3_Rfx1_Rfx4	ENSMUST00000061973.4|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr15_-_84065329_84065364	0.383549	Rfx3_Rfx1_Rfx4	ENSMUST00000156187.1|Efcab6|ENSMUSG00000022441.11|EF-hand calcium binding domain 6
mm10_v2_chr16_-_91069142_91069159	0.381205	Rfx3_Rfx1_Rfx4	ENSMUST00000035689.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene 	ENSMUST00000114076.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene
mm10_v2_chr19_+_8840519_8840549	0.381152	Rfx3_Rfx1_Rfx4	ENSMUST00000086058.6|Bscl2|ENSMUSG00000071657.6|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm10_v2_chr3_+_68468162_68468209	0.379773	Rfx3_Rfx1_Rfx4	ENSMUST00000182532.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr14_-_31001588_31001672	0.377711	Rfx3_Rfx1_Rfx4	ENSMUST00000162092.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae) 	ENSMUST00000160342.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae)
mm10_v2_chr8_+_45627946_45627975	0.369516	Rfx3_Rfx1_Rfx4	ENSMUST00000145458.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr1_-_124045247_124045267	0.368848	Rfx3_Rfx1_Rfx4	ENSMUST00000112603.2|Dpp10|ENSMUSG00000036815.10|dipeptidylpeptidase 10
mm10_v2_chrX_-_152368680_152368740	0.367567	Rfx3_Rfx1_Rfx4	ENSMUST00000070316.5|Gpr173|ENSMUSG00000056679.7|G-protein coupled receptor 173
mm10_v2_chr16_-_21694570_21694665	0.367186	Rfx3_Rfx1_Rfx4	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr4_+_128654686_128654738	0.366636	Rfx3_Rfx1_Rfx4	ENSMUST00000030588.6|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila) 	ENSMUST00000136377.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr9_-_42472198_42472265	0.365407	Rfx3_Rfx1_Rfx4	ENSMUST00000128959.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000066148.5|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000138506.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like
mm10_v2_chr19_+_4855129_4855269	0.36539	Rfx3_Rfx1_Rfx4	ENSMUST00000119694.1|Ctsf|ENSMUSG00000083282.2|cathepsin F
mm10_v2_chr16_-_3908639_3908689	0.364927	Rfx3_Rfx1_Rfx4	ENSMUST00000115859.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr9_-_60687459_60687672	0.361584	Rfx3_Rfx1_Rfx4	ENSMUST00000114032.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000166168.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000132366.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr19_-_3282958_3283048	0.361461	Rfx3_Rfx1_Rfx4	ENSMUST00000119292.1|Ighmbp2|ENSMUSG00000024831.7|immunoglobulin mu binding protein 2 	ENSMUST00000025751.3|Ighmbp2|ENSMUSG00000024831.7|immunoglobulin mu binding protein 2
mm10_v2_chr19_+_6942501_6942584	0.360881	Rfx3_Rfx1_Rfx4	ENSMUST00000113423.3|Bad|ENSMUSG00000024959.7|BCL2-associated agonist of cell death
mm10_v2_chr17_+_34604262_34604304	0.359754	Rfx3_Rfx1_Rfx4	ENSMUST00000174041.1|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr1_-_124045523_124045571	0.359703	Rfx3_Rfx1_Rfx4	ENSMUST00000112606.1|Dpp10|ENSMUSG00000036815.10|dipeptidylpeptidase 10
mm10_v2_chr8_+_83666827_83666882	0.356553	Rfx3_Rfx1_Rfx4	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr17_-_56074932_56075036	0.355085	Rfx3_Rfx1_Rfx4	ENSMUST00000019722.5|Ubxn6|ENSMUSG00000019578.5|UBX domain protein 6
mm10_v2_chr9_-_51008936_51009080	0.353326	Rfx3_Rfx1_Rfx4	ENSMUST00000176824.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000176663.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000041375.10|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2
mm10_v2_chr9_-_87255536_87255536	0.350908	Rfx3_Rfx1_Rfx4	ENSMUST00000093802.4|4922501C03Rik|ENSMUSG00000056919.8|RIKEN cDNA 4922501C03 gene
mm10_v2_chr3_-_88458876_88459043	0.350786	Rfx3_Rfx1_Rfx4	ENSMUST00000147200.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000169222.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr3_+_145118564_145118622	0.349935	Rfx3_Rfx1_Rfx4	ENSMUST00000098538.2|Odf2l|ENSMUSG00000028256.10|outer dense fiber of sperm tails 2-like 	ENSMUST00000106192.2|Odf2l|ENSMUSG00000028256.10|outer dense fiber of sperm tails 2-like 	ENSMUST00000029920.8|Odf2l|ENSMUSG00000028256.10|outer dense fiber of sperm tails 2-like 	ENSMUST00000098539.2|Odf2l|ENSMUSG00000028256.10|outer dense fiber of sperm tails 2-like
mm10_v2_chr8_+_20567716_20567716	0.347645	Rfx3_Rfx1_Rfx4	ENSMUST00000178995.1|Gm21092|ENSMUSG00000095403.1|predicted gene, 21092
mm10_v2_chr10_-_39899238_39899238	0.345485	Rfx3_Rfx1_Rfx4	ENSMUST00000178563.1|AA474331|ENSMUSG00000096687.1|expressed sequence AA474331
mm10_v2_chr13_-_34002740_34002783	0.345291	Rfx3_Rfx1_Rfx4	ENSMUST00000167237.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000168400.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm10_v2_chr5_-_92675253_92675287	0.338197	Rfx3_Rfx1_Rfx4	ENSMUST00000151180.1|Ccdc158|ENSMUSG00000050050.10|coiled-coil domain containing 158 	ENSMUST00000150359.1|Ccdc158|ENSMUSG00000050050.10|coiled-coil domain containing 158
mm10_v2_chr12_-_32061221_32061301	0.33164	Rfx3_Rfx1_Rfx4	ENSMUST00000003079.5|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta 	ENSMUST00000036497.9|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta
mm10_v2_chr4_+_134102581_134102618	0.327922	Rfx3_Rfx1_Rfx4	ENSMUST00000074690.4|Ubxn11|ENSMUSG00000012126.10|UBX domain protein 11 	ENSMUST00000070246.2|Ubxn11|ENSMUSG00000012126.10|UBX domain protein 11 	ENSMUST00000156750.1|Ubxn11|ENSMUSG00000012126.10|UBX domain protein 11
mm10_v2_chr12_+_116047713_116047807	0.326948	Rfx3_Rfx1_Rfx4	ENSMUST00000073551.5|Zfp386|ENSMUSG00000042063.11|zinc finger protein 386 (Kruppel-like) 	ENSMUST00000183125.1|Zfp386|ENSMUSG00000042063.11|zinc finger protein 386 (Kruppel-like)
mm10_v2_chr4_-_62208426_62208487	0.326428	Rfx3_Rfx1_Rfx4	ENSMUST00000068822.3|Zfp37|ENSMUSG00000028389.4|zinc finger protein 37
mm10_v2_chrX_-_102071188_102071204	0.325911	Rfx3_Rfx1_Rfx4	ENSMUST00000113631.1|Rgag4|ENSMUSG00000049191.6|retrotransposon gag domain containing 4
mm10_v2_chr17_+_24549950_24550062	0.325064	Rfx3_Rfx1_Rfx4	ENSMUST00000035565.3|Pkd1|ENSMUSG00000032855.5|polycystic kidney disease 1 homolog
mm10_v2_chr9_-_64341288_64341311	0.322156	Rfx3_Rfx1_Rfx4	ENSMUST00000068367.7|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like
mm10_v2_chr13_+_80886095_80886201	0.322152	Rfx3_Rfx1_Rfx4	ENSMUST00000161441.1|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr17_+_78937124_78937183	0.32111	Rfx3_Rfx1_Rfx4	ENSMUST00000024887.4|Ndufaf7|ENSMUSG00000024082.4|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7
mm10_v2_chr9_-_122950960_122951006	0.320685	Rfx3_Rfx1_Rfx4	ENSMUST00000035154.3|1110059G10Rik|ENSMUSG00000032551.6|RIKEN cDNA 1110059G10 gene
mm10_v2_chr8_+_105701624_105701693	0.319575	Rfx3_Rfx1_Rfx4	ENSMUST00000093195.6|Pard6a|ENSMUSG00000005699.9|par-6 (partitioning defective 6,) homolog alpha (C. elegans)
mm10_v2_chr4_+_129960760_129960808	0.316757	Rfx3_Rfx1_Rfx4	ENSMUST00000139884.1|1700003M07Rik|ENSMUSG00000085389.1|RIKEN cDNA 1700003M07 gene
mm10_v2_chr17_+_33920522_33920554	0.312782	Rfx3_Rfx1_Rfx4	ENSMUST00000172489.1|Tapbp|ENSMUSG00000024308.8|TAP binding protein
mm10_v2_chrX_-_122397351_122397425	0.312139	Rfx3_Rfx1_Rfx4	ENSMUST00000079490.4|Nap1l3|ENSMUSG00000055733.5|nucleosome assembly protein 1-like 3
mm10_v2_chr7_+_19076242_19076273	0.308255	Rfx3_Rfx1_Rfx4	ENSMUST00000032570.7|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif 	ENSMUST00000108479.1|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif
mm10_v2_chr4_-_141874879_141874953	0.306201	Rfx3_Rfx1_Rfx4	ENSMUST00000036854.3|Efhd2|ENSMUSG00000040659.3|EF hand domain containing 2
mm10_v2_chr7_-_44929410_44929521	0.305939	Rfx3_Rfx1_Rfx4	ENSMUST00000107857.3|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000085399.6|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000167930.1|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000166972.1|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit
mm10_v2_chr1_+_179668202_179668268	0.303099	Rfx3_Rfx1_Rfx4	ENSMUST00000040538.3|Sccpdh|ENSMUSG00000038936.7|saccharopine dehydrogenase (putative)
mm10_v2_chr1_+_118389058_118389058	0.298849	Rfx3_Rfx1_Rfx4	ENSMUST00000049404.6|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1 	ENSMUST00000070989.7|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1 	ENSMUST00000165223.1|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1 	ENSMUST00000178710.1|Clasp1|ENSMUSG00000064302.7|CLIP associating protein 1
mm10_v2_chr4_+_152096719_152096782	0.297764	Rfx3_Rfx1_Rfx4	ENSMUST00000105661.3|Plekhg5|ENSMUSG00000039713.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 5 	ENSMUST00000084115.3|Plekhg5|ENSMUSG00000039713.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm10_v2_chr5_-_136986829_136986901	0.292595	Rfx3_Rfx1_Rfx4	ENSMUST00000034953.7|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1 	ENSMUST00000085941.5|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1
mm10_v2_chr10_-_56228636_56228695	0.291674	Rfx3_Rfx1_Rfx4	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr11_+_109650574_109650579	0.290279	Rfx3_Rfx1_Rfx4	ENSMUST00000106676.1|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chr8_-_83458386_83458397	0.28743	Rfx3_Rfx1_Rfx4	ENSMUST00000081506.3|Scoc|ENSMUSG00000063253.4|short coiled-coil protein
mm10_v2_chr15_+_78428564_78428636	0.285622	Rfx3_Rfx1_Rfx4	ENSMUST00000166142.2|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17 	ENSMUST00000162517.1|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17 	ENSMUST00000089414.4|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17
mm10_v2_chr10_+_60399726_60399772	0.284734	Rfx3_Rfx1_Rfx4	ENSMUST00000164428.1|Gm17455|ENSMUSG00000090439.1|predicted gene, 17455
mm10_v2_chr19_+_47178820_47178997	0.279475	Rfx3_Rfx1_Rfx4	ENSMUST00000111808.3|Neurl1a|ENSMUSG00000006435.9|neuralized homolog 1A (Drosophila)
mm10_v2_chr12_+_11265867_11265886	0.279082	Rfx3_Rfx1_Rfx4	ENSMUST00000020931.5|Smc6|ENSMUSG00000020608.6|structural maintenance of chromosomes 6
mm10_v2_chr11_+_115163333_115163348	0.27344	Rfx3_Rfx1_Rfx4	ENSMUST00000021077.3|Slc9a3r1|ENSMUSG00000020733.3|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1
mm10_v2_chr11_+_101279092_101279111	0.271913	Rfx3_Rfx1_Rfx4	ENSMUST00000103107.4|Cntd1|ENSMUSG00000078653.4|cyclin N-terminal domain containing 1
mm10_v2_chr5_+_35583018_35583110	0.27119	Rfx3_Rfx1_Rfx4	ENSMUST00000068947.7|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl 	ENSMUST00000114237.1|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl 	ENSMUST00000156125.1|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl 	ENSMUST00000068563.5|Acox3|ENSMUSG00000029098.10|acyl-Coenzyme A oxidase 3, pristanoyl
mm10_v2_chr3_-_144720315_144720336	0.270678	Rfx3_Rfx1_Rfx4	ENSMUST00000163279.1|Sh3glb1|ENSMUSG00000037062.9|SH3-domain GRB2-like B1 (endophilin)
mm10_v2_chr4_+_53631506_53631574	0.269342	Rfx3_Rfx1_Rfx4	ENSMUST00000159415.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like 	ENSMUST00000163067.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like
mm10_v2_chr9_+_108002501_108002680	0.269221	Rfx3_Rfx1_Rfx4	ENSMUST00000035214.4|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1 	ENSMUST00000175874.1|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1
mm10_v2_chr4_+_103114712_103114762	0.267291	Rfx3_Rfx1_Rfx4	ENSMUST00000143417.1|Mier1|ENSMUSG00000028522.10|mesoderm induction early response 1 homolog (Xenopus laevis
mm10_v2_chr7_-_67222412_67222458	0.267067	Rfx3_Rfx1_Rfx4	ENSMUST00000181631.1|1700112J16Rik|ENSMUSG00000097527.1|RIKEN cDNA 1700112J16 gene
mm10_v2_chr15_+_78428650_78428671	0.265442	Rfx3_Rfx1_Rfx4	ENSMUST00000159771.1|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17
mm10_v2_chr12_-_69790660_69790735	0.264994	Rfx3_Rfx1_Rfx4	ENSMUST00000021377.4|Cdkl1|ENSMUSG00000020990.4|cyclin-dependent kinase-like 1 (CDC2-related kinase)
mm10_v2_chr7_+_28179469_28179535	0.262902	Rfx3_Rfx1_Rfx4	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr5_+_24586721_24586794	0.262469	Rfx3_Rfx1_Rfx4	ENSMUST00000121863.1|Chpf2|ENSMUSG00000038181.10|chondroitin polymerizing factor 2 	ENSMUST00000088295.4|Chpf2|ENSMUSG00000038181.10|chondroitin polymerizing factor 2
mm10_v2_chr6_-_119330668_119330694	0.262378	Rfx3_Rfx1_Rfx4	ENSMUST00000112756.1|Lrtm2|ENSMUSG00000055003.8|leucine-rich repeats and transmembrane domains 2
mm10_v2_chr10_+_20952547_20952593	0.260382	Rfx3_Rfx1_Rfx4	ENSMUST00000105525.4|Ahi1|ENSMUSG00000019986.10|Abelson helper integration site 1
mm10_v2_chr4_-_123904826_123904844	0.259067	Rfx3_Rfx1_Rfx4	ENSMUST00000181292.1|Gm26606|ENSMUSG00000097337.1|predicted gene, 26606
mm10_v2_chr11_-_76468396_76468473	0.258551	Rfx3_Rfx1_Rfx4	ENSMUST00000065028.7|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr11_-_114795888_114795903	0.258463	Rfx3_Rfx1_Rfx4	ENSMUST00000000206.3|Btbd17|ENSMUSG00000000202.3|BTB (POZ) domain containing 17
mm10_v2_chr16_+_32673144_32673199	0.257653	Rfx3_Rfx1_Rfx4	ENSMUST00000115122.2|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000115120.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000131238.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000115121.2|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000152361.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2
mm10_v2_chr2_-_118703963_118703963	0.2573	Rfx3_Rfx1_Rfx4	ENSMUST00000104937.1|Ankrd63|ENSMUSG00000078137.1|ankyrin repeat domain 63
mm10_v2_chr3_-_89214329_89214372	0.257191	Rfx3_Rfx1_Rfx4	ENSMUST00000118964.2|Mtx1|ENSMUSG00000064068.7|metaxin 1
mm10_v2_chr17_+_24896488_24896530	0.256942	Rfx3_Rfx1_Rfx4	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr16_-_91728975_91729092	0.256297	Rfx3_Rfx1_Rfx4	ENSMUST00000073466.6|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr11_-_107337556_107337637	0.252651	Rfx3_Rfx1_Rfx4	ENSMUST00000040380.6|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr11_+_78536355_78536368	0.251485	Rfx3_Rfx1_Rfx4	ENSMUST00000128788.1|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20
mm10_v2_chr12_+_110889231_110889305	0.250964	Rfx3_Rfx1_Rfx4	ENSMUST00000169597.1|Tecpr2|ENSMUSG00000021275.9|tectonin beta-propeller repeat containing 2 	ENSMUST00000165978.1|Tecpr2|ENSMUSG00000021275.9|tectonin beta-propeller repeat containing 2
mm10_v2_chr6_+_83185946_83186151	0.249657	Rfx3_Rfx1_Rfx4	ENSMUST00000113907.1|Dctn1|ENSMUSG00000031865.9|dynactin 1
mm10_v2_chr8_+_123332676_123332740	0.249623	Rfx3_Rfx1_Rfx4	ENSMUST00000010298.6|Spire2|ENSMUSG00000010154.6|spire homolog 2 (Drosophila)
mm10_v2_chr4_-_121215071_121215114	0.2484	Rfx3_Rfx1_Rfx4	ENSMUST00000056635.5|Rlf|ENSMUSG00000049878.6|rearranged L-myc fusion sequence
mm10_v2_chr2_-_5063996_5064048	0.244193	Rfx3_Rfx1_Rfx4	ENSMUST00000114996.1|Optn|ENSMUSG00000026672.5|optineurin
mm10_v2_chr16_-_93603803_93603815	0.241948	Rfx3_Rfx1_Rfx4	ENSMUST00000023669.5|Setd4|ENSMUSG00000022948.8|SET domain containing 4 	ENSMUST00000113951.2|Setd4|ENSMUSG00000022948.8|SET domain containing 4
mm10_v2_chr5_+_100196611_100196611	0.241799	Rfx3_Rfx1_Rfx4	ENSMUST00000066813.1|Gm9932|ENSMUSG00000054032.1|predicted gene 9932
mm10_v2_chr19_-_4839286_4839338	0.241775	Rfx3_Rfx1_Rfx4	ENSMUST00000037246.5|Ccs|ENSMUSG00000034108.5|copper chaperone for superoxide dismutase
mm10_v2_chr9_-_50728067_50728129	0.241259	Rfx3_Rfx1_Rfx4	ENSMUST00000117646.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr17_-_6655939_6655939	0.240938	Rfx3_Rfx1_Rfx4	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr7_+_28180272_28180316	0.23973	Rfx3_Rfx1_Rfx4	ENSMUST00000173223.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr8_-_83332416_83332494	0.238019	Rfx3_Rfx1_Rfx4	ENSMUST00000177594.1|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2 	ENSMUST00000053902.3|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2
mm10_v2_chr18_-_31609893_31609927	0.235419	Rfx3_Rfx1_Rfx4	ENSMUST00000060396.6|Slc25a46|ENSMUSG00000024259.8|solute carrier family 25, member 46
mm10_v2_chr2_-_36136602_36136625	0.23441	Rfx3_Rfx1_Rfx4	ENSMUST00000122456.1|Rbm18|ENSMUSG00000026889.6|RNA binding motif protein 18
mm10_v2_chr7_-_43313063_43313116	0.233696	Rfx3_Rfx1_Rfx4	ENSMUST00000135130.1|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715 	ENSMUST00000139061.1|Zfp715|ENSMUSG00000012640.10|zinc finger protein 715
mm10_v2_chr5_+_136987019_136987019	0.232826	Rfx3_Rfx1_Rfx4	ENSMUST00000004968.4|Plod3|ENSMUSG00000004846.4|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm10_v2_chr12_+_69963452_69963474	0.232267	Rfx3_Rfx1_Rfx4	ENSMUST00000110560.1|Gm3086|ENSMUSG00000079076.1|predicted gene 3086
mm10_v2_chr12_+_64965742_64965775	0.231033	Rfx3_Rfx1_Rfx4	ENSMUST00000066296.7|Fam179b|ENSMUSG00000035614.10|family with sequence similarity 179, member B
mm10_v2_chr16_-_16560201_16560223	0.228352	Rfx3_Rfx1_Rfx4	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr6_+_83109071_83109114	0.228116	Rfx3_Rfx1_Rfx4	ENSMUST00000113938.3|Mrpl53|ENSMUSG00000030037.8|mitochondrial ribosomal protein L53
mm10_v2_chr7_+_28180226_28180266	0.22766	Rfx3_Rfx1_Rfx4	ENSMUST00000172467.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr12_+_72441852_72441866	0.226455	Rfx3_Rfx1_Rfx4	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr9_+_20652107_20652138	0.225142	Rfx3_Rfx1_Rfx4	ENSMUST00000034689.6|Pin1|ENSMUSG00000032171.6|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
mm10_v2_chr18_+_63708689_63708730	0.223026	Rfx3_Rfx1_Rfx4	ENSMUST00000072726.5|Wdr7|ENSMUSG00000040560.9|WD repeat domain 7
mm10_v2_chr11_+_120467635_120467719	0.222571	Rfx3_Rfx1_Rfx4	ENSMUST00000140862.1|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate 	ENSMUST00000106205.1|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate 	ENSMUST00000106203.1|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate 	ENSMUST00000026900.7|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate
mm10_v2_chr7_+_122067164_122067216	0.22185	Rfx3_Rfx1_Rfx4	ENSMUST00000033158.4|Ubfd1|ENSMUSG00000030870.6|ubiquitin family domain containing 1
mm10_v2_chr19_+_6276725_6276792	0.218981	Rfx3_Rfx1_Rfx4	ENSMUST00000025684.3|Ehd1|ENSMUSG00000024772.9|EH-domain containing 1
mm10_v2_chr13_-_49309217_49309257	0.217317	Rfx3_Rfx1_Rfx4	ENSMUST00000110087.2|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr15_+_76671615_76671710	0.21641	Rfx3_Rfx1_Rfx4	ENSMUST00000037551.8|Ppp1r16a|ENSMUSG00000033819.9|protein phosphatase 1, regulatory (inhibitor) subunit 16A
mm10_v2_chr7_+_44857309_44857354	0.216313	Rfx3_Rfx1_Rfx4	ENSMUST00000098478.3|Pnkp|ENSMUSG00000002963.10|polynucleotide kinase 3'- phosphatase
mm10_v2_chr4_+_105790534_105790534	0.21384	Rfx3_Rfx1_Rfx4	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr10_+_86705811_86705878	0.211128	Rfx3_Rfx1_Rfx4	ENSMUST00000061458.7|BC030307|ENSMUSG00000044937.8|cDNA sequence BC030307 	ENSMUST00000075632.6|BC030307|ENSMUSG00000044937.8|cDNA sequence BC030307
mm10_v2_chr9_+_72958785_72958850	0.21111	Rfx3_Rfx1_Rfx4	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chr5_-_112228934_112228975	0.210955	Rfx3_Rfx1_Rfx4	ENSMUST00000181535.2|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding)
mm10_v2_chr3_-_88459047_88459101	0.209201	Rfx3_Rfx1_Rfx4	ENSMUST00000165898.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000127436.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr5_+_30281377_30281447	0.208979	Rfx3_Rfx1_Rfx4	ENSMUST00000101448.3|Drc1|ENSMUSG00000073102.3|dynein regulatory complex subunit 1
mm10_v2_chr11_+_78536393_78536492	0.208643	Rfx3_Rfx1_Rfx4	ENSMUST00000050366.8|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20 	ENSMUST00000108275.1|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20
mm10_v2_chr3_-_57847478_57847610	0.204873	Rfx3_Rfx1_Rfx4	ENSMUST00000120289.1|Pfn2|ENSMUSG00000027805.10|profilin 2 	ENSMUST00000066882.8|Pfn2|ENSMUSG00000027805.10|profilin 2
mm10_v2_chr17_+_33955812_33955901	0.204438	Rfx3_Rfx1_Rfx4	ENSMUST00000025178.9|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast) 	ENSMUST00000114330.2|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast)
mm10_v2_chr1_-_10232670_10232670	0.204133	Rfx3_Rfx1_Rfx4	ENSMUST00000088615.4|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 	ENSMUST00000131556.1|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
mm10_v2_chr8_-_45975224_45975281	0.20235	Rfx3_Rfx1_Rfx4	ENSMUST00000095323.1|1700029J07Rik|ENSMUSG00000071103.3|RIKEN cDNA 1700029J07 gene 	ENSMUST00000098786.2|1700029J07Rik|ENSMUSG00000071103.3|RIKEN cDNA 1700029J07 gene
mm10_v2_chr9_-_7177000_7177063	0.198994	Rfx3_Rfx1_Rfx4	ENSMUST00000048417.6|Dync2h1|ENSMUSG00000047193.9|dynein cytoplasmic 2 heavy chain 1
mm10_v2_chr4_+_138434647_138434748	0.198626	Rfx3_Rfx1_Rfx4	ENSMUST00000044058.4|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1 	ENSMUST00000105813.1|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1 	ENSMUST00000105815.1|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1
mm10_v2_chr10_+_58497918_58497970	0.196669	Rfx3_Rfx1_Rfx4	ENSMUST00000036576.8|Ccdc138|ENSMUSG00000038010.8|coiled-coil domain containing 138
mm10_v2_chr9_-_98563580_98563620	0.196106	Rfx3_Rfx1_Rfx4	ENSMUST00000058992.2|4930579K19Rik|ENSMUSG00000051074.2|RIKEN cDNA 4930579K19 gene
mm10_v2_chr6_-_119330723_119330800	0.195874	Rfx3_Rfx1_Rfx4	ENSMUST00000068351.7|Lrtm2|ENSMUSG00000055003.8|leucine-rich repeats and transmembrane domains 2
mm10_v2_chr17_+_33955902_33955926	0.19533	Rfx3_Rfx1_Rfx4	ENSMUST00000173196.2|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast)
mm10_v2_chr11_-_83302586_83302637	0.195016	Rfx3_Rfx1_Rfx4	ENSMUST00000176374.1|Pex12|ENSMUSG00000018733.4|peroxisomal biogenesis factor 12
mm10_v2_chr6_-_90428401_90428480	0.193516	Rfx3_Rfx1_Rfx4	ENSMUST00000062750.5|Ccdc37|ENSMUSG00000048794.8|coiled-coil domain containing 37 	ENSMUST00000165673.1|Ccdc37|ENSMUSG00000048794.8|coiled-coil domain containing 37
mm10_v2_chr13_+_49504774_49504816	0.190599	Rfx3_Rfx1_Rfx4	ENSMUST00000051504.7|Ecm2|ENSMUSG00000043631.7|extracellular matrix protein 2, female organ and adipocyte specific
mm10_v2_chr16_+_36041184_36041197	0.190425	Rfx3_Rfx1_Rfx4	ENSMUST00000042203.8|Wdr5b|ENSMUSG00000034379.8|WD repeat domain 5B
mm10_v2_chr16_+_49699198_49699304	0.190331	Rfx3_Rfx1_Rfx4	ENSMUST00000046777.4|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57 	ENSMUST00000142682.1|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57
mm10_v2_chr6_+_83156401_83156451	0.189446	Rfx3_Rfx1_Rfx4	ENSMUST00000032106.4|1700003E16Rik|ENSMUSG00000030030.4|RIKEN cDNA 1700003E16 gene
mm10_v2_chr3_-_20035285_20035325	0.186153	Rfx3_Rfx1_Rfx4	ENSMUST00000108321.1|Hps3|ENSMUSG00000027615.8|Hermansky-Pudlak syndrome 3 homolog (human) 	ENSMUST00000012580.6|Hps3|ENSMUSG00000027615.8|Hermansky-Pudlak syndrome 3 homolog (human)
mm10_v2_chr8_-_46294592_46294671	0.184183	Rfx3_Rfx1_Rfx4	ENSMUST00000058636.7|Helt|ENSMUSG00000047171.7|helt bHLH transcription factor
mm10_v2_chr15_-_71727815_71727848	0.182996	Rfx3_Rfx1_Rfx4	ENSMUST00000022953.8|Fam135b|ENSMUSG00000036800.7|family with sequence similarity 135, member B
mm10_v2_chr2_-_121271341_121271397	0.182049	Rfx3_Rfx1_Rfx4	ENSMUST00000110647.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr3_+_106684943_106685021	0.175517	Rfx3_Rfx1_Rfx4	ENSMUST00000098751.3|Lrif1|ENSMUSG00000056260.9|ligand dependent nuclear receptor interacting factor 1
mm10_v2_chr10_-_80900749_80900969	0.172531	Rfx3_Rfx1_Rfx4	ENSMUST00000020440.6|Timm13|ENSMUSG00000020219.6|translocase of inner mitochondrial membrane 13
mm10_v2_chr7_-_140882274_140882330	0.170855	Rfx3_Rfx1_Rfx4	ENSMUST00000026559.7|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chr2_-_169405435_169405473	0.170571	Rfx3_Rfx1_Rfx4	ENSMUST00000131509.1|4930529I22Rik|ENSMUSG00000085350.1|RIKEN cDNA 4930529I22 gene
mm10_v2_chr15_+_9436028_9436083	0.169943	Rfx3_Rfx1_Rfx4	ENSMUST00000042360.3|Capsl|ENSMUSG00000039676.3|calcyphosine-like
mm10_v2_chr9_+_107547288_107547379	0.167039	Rfx3_Rfx1_Rfx4	ENSMUST00000010188.7|Zmynd10|ENSMUSG00000010044.7|zinc finger, MYND domain containing 10
mm10_v2_chr17_-_87446854_87446935	0.165667	Rfx3_Rfx1_Rfx4	ENSMUST00000040440.6|Calm2|ENSMUSG00000036438.6|calmodulin 2
mm10_v2_chr4_-_117872520_117872560	0.165318	Rfx3_Rfx1_Rfx4	ENSMUST00000171052.1|Ccdc24|ENSMUSG00000078588.4|coiled-coil domain containing 24 	ENSMUST00000166325.1|Ccdc24|ENSMUSG00000078588.4|coiled-coil domain containing 24 	ENSMUST00000106422.2|Ccdc24|ENSMUSG00000078588.4|coiled-coil domain containing 24
mm10_v2_chr11_-_103267405_103267472	0.164877	Rfx3_Rfx1_Rfx4	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr1_+_172482199_172482314	0.162274	Rfx3_Rfx1_Rfx4	ENSMUST00000135267.1|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000052629.6|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000111235.2|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9
mm10_v2_chr12_-_31634592_31634677	0.159874	Rfx3_Rfx1_Rfx4	ENSMUST00000020979.7|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29 	ENSMUST00000177962.1|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29
mm10_v2_chr18_-_12305638_12305720	0.15699	Rfx3_Rfx1_Rfx4	ENSMUST00000122408.1|Ankrd29|ENSMUSG00000057766.7|ankyrin repeat domain 29 	ENSMUST00000118525.1|Ankrd29|ENSMUSG00000057766.7|ankyrin repeat domain 29 	ENSMUST00000142066.1|Ankrd29|ENSMUSG00000057766.7|ankyrin repeat domain 29
mm10_v2_chr8_-_34965631_34965714	0.15661	Rfx3_Rfx1_Rfx4	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr4_-_121017201_121017261	0.155504	Rfx3_Rfx1_Rfx4	ENSMUST00000043200.7|Smap2|ENSMUSG00000032870.8|small ArfGAP 2
mm10_v2_chr8_+_69832633_69832712	0.155437	Rfx3_Rfx1_Rfx4	ENSMUST00000131637.2|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4 	ENSMUST00000081503.6|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4
mm10_v2_chr5_-_148928619_148928659	0.154421	Rfx3_Rfx1_Rfx4	ENSMUST00000149169.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1 	ENSMUST00000047257.8|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr2_-_118256929_118256973	0.154362	Rfx3_Rfx1_Rfx4	ENSMUST00000028820.6|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1 	ENSMUST00000028821.3|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1
mm10_v2_chr6_+_48395652_48395688	0.153761	Rfx3_Rfx1_Rfx4	ENSMUST00000077093.4|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1
mm10_v2_chr16_+_96235801_96235801	0.153357	Rfx3_Rfx1_Rfx4	ENSMUST00000113800.2|B3galt5|ENSMUSG00000074892.3|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm10_v2_chr11_+_90638127_90638207	0.153098	Rfx3_Rfx1_Rfx4	ENSMUST00000020851.8|Cox11|ENSMUSG00000020544.8|cytochrome c oxidase assembly protein 11
mm10_v2_chr10_+_119992962_119993070	0.151734	Rfx3_Rfx1_Rfx4	ENSMUST00000154238.1|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr2_-_18998126_18998202	0.151402	Rfx3_Rfx1_Rfx4	ENSMUST00000006912.5|Pip4k2a|ENSMUSG00000026737.6|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
mm10_v2_chr10_-_79746553_79746586	0.146397	Rfx3_Rfx1_Rfx4	ENSMUST00000020580.6|Polrmt|ENSMUSG00000020329.6|polymerase (RNA) mitochondrial (DNA directed) 	ENSMUST00000159016.1|Polrmt|ENSMUSG00000020329.6|polymerase (RNA) mitochondrial (DNA directed)
mm10_v2_chrX_-_48594373_48594493	0.145782	Rfx3_Rfx1_Rfx4	ENSMUST00000088898.4|Zfp280c|ENSMUSG00000036916.7|zinc finger protein 280C 	ENSMUST00000072292.5|Zfp280c|ENSMUSG00000036916.7|zinc finger protein 280C
mm10_v2_chr10_-_80742211_80742280	0.14552	Rfx3_Rfx1_Rfx4	ENSMUST00000020420.7|Ap3d1|ENSMUSG00000020198.7|adaptor-related protein complex 3, delta 1 subunit
mm10_v2_chr8_-_85299483_85299535	0.145299	Rfx3_Rfx1_Rfx4	ENSMUST00000034131.8|Vps35|ENSMUSG00000031696.8|vacuolar protein sorting 35
mm10_v2_chr4_+_155086577_155086610	0.14472	Rfx3_Rfx1_Rfx4	ENSMUST00000030915.4|Morn1|ENSMUSG00000029049.8|MORN repeat containing 1 	ENSMUST00000155775.1|Morn1|ENSMUSG00000029049.8|MORN repeat containing 1 	ENSMUST00000127457.1|Morn1|ENSMUSG00000029049.8|MORN repeat containing 1
mm10_v2_chr4_+_109343029_109343081	0.143115	Rfx3_Rfx1_Rfx4	ENSMUST00000030281.5|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr11_-_35980473_35980579	0.142815	Rfx3_Rfx1_Rfx4	ENSMUST00000018993.6|Wwc1|ENSMUSG00000018849.6|WW, C2 and coiled-coil domain containing 1
mm10_v2_chr2_+_119288725_119288771	0.141435	Rfx3_Rfx1_Rfx4	ENSMUST00000037280.4|Vps18|ENSMUSG00000034216.6|vacuolar protein sorting 18 (yeast)
mm10_v2_chr19_-_23652780_23652820	0.14139	Rfx3_Rfx1_Rfx4	ENSMUST00000035849.3|1700028P14Rik|ENSMUSG00000033053.3|RIKEN cDNA 1700028P14 gene
mm10_v2_chr2_+_119972699_119972746	0.140655	Rfx3_Rfx1_Rfx4	ENSMUST00000066058.7|Mapkbp1|ENSMUSG00000033902.11|mitogen-activated protein kinase binding protein 1
mm10_v2_chr8_+_94984399_94984477	0.139804	Rfx3_Rfx1_Rfx4	ENSMUST00000093271.6|Gpr56|ENSMUSG00000031785.9|G protein-coupled receptor 56
mm10_v2_chr7_-_140881811_140881869	0.135603	Rfx3_Rfx1_Rfx4	ENSMUST00000106048.3|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000147331.2|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000137710.1|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chr10_+_42860648_42860676	0.134967	Rfx3_Rfx1_Rfx4	ENSMUST00000105495.1|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr1_+_92906959_92907036	0.134652	Rfx3_Rfx1_Rfx4	ENSMUST00000060913.6|Dusp28|ENSMUSG00000047067.6|dual specificity phosphatase 28
mm10_v2_chr6_+_48395586_48395646	0.133512	Rfx3_Rfx1_Rfx4	ENSMUST00000114571.1|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1 	ENSMUST00000114572.3|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1 	ENSMUST00000031815.5|Krba1|ENSMUSG00000042810.8|KRAB-A domain containing 1
mm10_v2_chr15_-_98763195_98763220	0.13327	Rfx3_Rfx1_Rfx4	ENSMUST00000053183.9|Arf3|ENSMUSG00000051853.8|ADP-ribosylation factor 3
mm10_v2_chr9_-_7176957_7176997	0.132221	Rfx3_Rfx1_Rfx4	ENSMUST00000147193.1|Dync2h1|ENSMUSG00000047193.9|dynein cytoplasmic 2 heavy chain 1 	ENSMUST00000139115.1|Dync2h1|ENSMUSG00000047193.9|dynein cytoplasmic 2 heavy chain 1
mm10_v2_chr13_-_49320219_49320311	0.127985	Rfx3_Rfx1_Rfx4	ENSMUST00000110086.1|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr10_+_75893398_75893429	0.127417	Rfx3_Rfx1_Rfx4	ENSMUST00000009236.4|Derl3|ENSMUSG00000009092.4|Der1-like domain family, member 3
mm10_v2_chrX_+_7884244_7884313	0.125499	Rfx3_Rfx1_Rfx4	ENSMUST00000115663.3|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr14_-_25927250_25927250	0.122436	Rfx3_Rfx1_Rfx4	ENSMUST00000100811.5|Tmem254a|ENSMUSG00000072676.5|transmembrane protein 254a
mm10_v2_chr8_-_89187560_89187560	0.120955	Rfx3_Rfx1_Rfx4	ENSMUST00000093326.2|Gm5356|ENSMUSG00000069962.2|predicted pseudogene 5356
mm10_v2_chr6_+_113392417_113392497	0.118696	Rfx3_Rfx1_Rfx4	ENSMUST00000032414.4|Ttll3|ENSMUSG00000030276.13|tubulin tyrosine ligase-like family, member 3 	ENSMUST00000038889.5|Ttll3|ENSMUSG00000030276.13|tubulin tyrosine ligase-like family, member 3
mm10_v2_chr12_+_105032638_105032705	0.117405	Rfx3_Rfx1_Rfx4	ENSMUST00000021522.3|Glrx5|ENSMUSG00000021102.3|glutaredoxin 5 homolog (S. cerevisiae)
mm10_v2_chr14_-_60197173_60197185	0.117329	Rfx3_Rfx1_Rfx4	ENSMUST00000131670.1|Atp8a2|ENSMUSG00000021983.9|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm10_v2_chr11_-_101278927_101279114	0.116779	Rfx3_Rfx1_Rfx4	ENSMUST00000168089.1|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3 	ENSMUST00000017332.3|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3
mm10_v2_chr7_-_126922887_126922926	0.116385	Rfx3_Rfx1_Rfx4	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr9_-_121277160_121277217	0.115514	Rfx3_Rfx1_Rfx4	ENSMUST00000051479.6|Ulk4|ENSMUSG00000040936.8|unc-51-like kinase 4 	ENSMUST00000171923.1|Ulk4|ENSMUSG00000040936.8|unc-51-like kinase 4
mm10_v2_chr12_+_84361636_84361657	0.11351	Rfx3_Rfx1_Rfx4	ENSMUST00000110276.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr8_+_36993551_36993611	0.1134	Rfx3_Rfx1_Rfx4	ENSMUST00000098825.3|AI429214|ENSMUSG00000074384.3|expressed sequence AI429214
mm10_v2_chr19_-_4125837_4125863	0.113068	Rfx3_Rfx1_Rfx4	ENSMUST00000121402.1|Aip|ENSMUSG00000024847.8|aryl-hydrocarbon receptor-interacting protein 	ENSMUST00000117831.1|Aip|ENSMUSG00000024847.8|aryl-hydrocarbon receptor-interacting protein
mm10_v2_chr17_+_56717759_56717819	0.10898	Rfx3_Rfx1_Rfx4	ENSMUST00000002452.6|Ndufa11|ENSMUSG00000002379.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11
mm10_v2_chr5_-_122372230_122372390	0.107055	Rfx3_Rfx1_Rfx4	ENSMUST00000031419.5|Fam216a|ENSMUSG00000029463.5|family with sequence similarity 216, member A
mm10_v2_chr2_+_29060239_29060287	0.105701	Rfx3_Rfx1_Rfx4	ENSMUST00000100237.3|Ttf1|ENSMUSG00000026803.11|transcription termination factor, RNA polymerase I
mm10_v2_chr9_-_59036387_59036460	0.104163	Rfx3_Rfx1_Rfx4	ENSMUST00000068664.5|Neo1|ENSMUSG00000032340.7|neogenin
mm10_v2_chr8_-_27202542_27202557	0.100629	Rfx3_Rfx1_Rfx4	ENSMUST00000038174.6|Got1l1|ENSMUSG00000039720.6|glutamic-oxaloacetic transaminase 1-like 1
mm10_v2_chr11_-_67965631_67965663	0.0995392	Rfx3_Rfx1_Rfx4	ENSMUST00000021287.5|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16 	ENSMUST00000126766.1|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16
mm10_v2_chr3_-_89214378_89214430	0.0994549	Rfx3_Rfx1_Rfx4	ENSMUST00000073572.4|Mtx1|ENSMUSG00000064068.7|metaxin 1
mm10_v2_chr2_-_92024502_92024529	0.0979332	Rfx3_Rfx1_Rfx4	ENSMUST00000028663.4|Creb3l1|ENSMUSG00000027230.9|cAMP responsive element binding protein 3-like 1
mm10_v2_chr8_+_56551090_56551143	0.0952766	Rfx3_Rfx1_Rfx4	ENSMUST00000040218.5|Fbxo8|ENSMUSG00000038206.6|F-box protein 8 	ENSMUST00000110322.3|Fbxo8|ENSMUSG00000038206.6|F-box protein 8
mm10_v2_chr10_+_33905015_33905111	0.0941436	Rfx3_Rfx1_Rfx4	ENSMUST00000169670.1|Rsph4a|ENSMUSG00000039552.7|radial spoke head 4 homolog A (Chlamydomonas)
mm10_v2_chr2_+_125136692_125136769	0.093981	Rfx3_Rfx1_Rfx4	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr16_+_91647859_91647905	0.0936144	Rfx3_Rfx1_Rfx4	ENSMUST00000119368.1|Son|ENSMUSG00000022961.11|Son DNA binding protein 	ENSMUST00000114037.2|Son|ENSMUSG00000022961.11|Son DNA binding protein 	ENSMUST00000114036.2|Son|ENSMUSG00000022961.11|Son DNA binding protein 	ENSMUST00000122302.1|Son|ENSMUSG00000022961.11|Son DNA binding protein
mm10_v2_chr1_-_171287916_171287929	0.0927508	Rfx3_Rfx1_Rfx4	ENSMUST00000111305.1|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21
mm10_v2_chr10_-_89621253_89621275	0.0923221	Rfx3_Rfx1_Rfx4	ENSMUST00000020102.7|Slc17a8|ENSMUSG00000019935.10|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
mm10_v2_chr10_-_86705485_86705509	0.092278	Rfx3_Rfx1_Rfx4	ENSMUST00000020238.7|Hsp90b1|ENSMUSG00000020048.7|heat shock protein 90, beta (Grp94), member 1
mm10_v2_chr11_-_85850333_85850333	0.0916031	Rfx3_Rfx1_Rfx4	ENSMUST00000146433.1|Gm11444|ENSMUSG00000069785.4|predicted gene 11444
mm10_v2_chr9_-_50727921_50728008	0.0915536	Rfx3_Rfx1_Rfx4	ENSMUST00000118707.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000034566.8|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr8_+_95055094_95055126	0.0898532	Rfx3_Rfx1_Rfx4	ENSMUST00000058479.6|Ccdc135|ENSMUSG00000031786.6|coiled-coil domain containing 135
mm10_v2_chr1_-_151428440_151428474	0.089297	Rfx3_Rfx1_Rfx4	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chr7_+_30232310_30232350	0.0867803	Rfx3_Rfx1_Rfx4	ENSMUST00000108193.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I 	ENSMUST00000108192.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr16_-_38341812_38341859	0.0867744	Rfx3_Rfx1_Rfx4	ENSMUST00000114740.2|Maats1|ENSMUSG00000022805.10|MYCBP-associated, testis expressed 1 	ENSMUST00000023501.8|Maats1|ENSMUSG00000022805.10|MYCBP-associated, testis expressed 1
mm10_v2_chr11_+_3895223_3895310	0.0841891	Rfx3_Rfx1_Rfx4	ENSMUST00000055931.4|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18 	ENSMUST00000109996.1|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18
mm10_v2_chr5_-_107987003_107987085	0.0782478	Rfx3_Rfx1_Rfx4	ENSMUST00000145239.1|Fam69a|ENSMUSG00000029270.4|family with sequence similarity 69, member A 	ENSMUST00000031198.4|Fam69a|ENSMUSG00000029270.4|family with sequence similarity 69, member A
mm10_v2_chr5_+_147430407_147430545	0.0782116	Rfx3_Rfx1_Rfx4	ENSMUST00000176600.1|Pan3|ENSMUSG00000029647.9|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr17_+_34837172_34837248	0.0756725	Rfx3_Rfx1_Rfx4	ENSMUST00000173995.1|Dxo|ENSMUSG00000040482.9|decapping exoribonuclease
mm10_v2_chr13_+_96542727_96542775	0.0748778	Rfx3_Rfx1_Rfx4	ENSMUST00000077672.4|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 	ENSMUST00000109444.2|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr4_-_41314877_41314889	0.074374	Rfx3_Rfx1_Rfx4	ENSMUST00000030145.8|Dcaf12|ENSMUSG00000028436.8|DDB1 and CUL4 associated factor 12
mm10_v2_chr9_+_44398176_44398176	0.0743233	Rfx3_Rfx1_Rfx4	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr11_+_97801917_97801998	0.0721411	Rfx3_Rfx1_Rfx4	ENSMUST00000127033.2|Lasp1|ENSMUSG00000038366.9|LIM and SH3 protein 1
mm10_v2_chr9_+_108049254_108049339	0.0699845	Rfx3_Rfx1_Rfx4	ENSMUST00000112295.2|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B 	ENSMUST00000047947.7|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B
mm10_v2_chr8_-_3467617_3467680	0.0695998	Rfx3_Rfx1_Rfx4	ENSMUST00000111081.3|Pex11g|ENSMUSG00000069633.6|peroxisomal biogenesis factor 11 gamma 	ENSMUST00000118194.1|Pex11g|ENSMUSG00000069633.6|peroxisomal biogenesis factor 11 gamma 	ENSMUST00000004686.6|Pex11g|ENSMUSG00000069633.6|peroxisomal biogenesis factor 11 gamma
mm10_v2_chr11_+_78245743_78245821	0.0685764	Rfx3_Rfx1_Rfx4	ENSMUST00000002133.8|Sdf2|ENSMUSG00000002064.10|stromal cell derived factor 2
mm10_v2_chr2_+_152427639_152427699	0.0685135	Rfx3_Rfx1_Rfx4	ENSMUST00000128737.1|6820408C15Rik|ENSMUSG00000032680.5|RIKEN cDNA 6820408C15 gene
mm10_v2_chr17_+_25828791_25828867	0.0682214	Rfx3_Rfx1_Rfx4	ENSMUST00000133595.1|Jmjd8|ENSMUSG00000025736.8|jumonji domain containing 8
mm10_v2_chr4_+_123016590_123016613	0.0676266	Rfx3_Rfx1_Rfx4	ENSMUST00000102649.3|Trit1|ENSMUSG00000028653.10|tRNA isopentenyltransferase 1
mm10_v2_chr17_+_25829036_25829120	0.0642524	Rfx3_Rfx1_Rfx4	ENSMUST00000026832.7|Jmjd8|ENSMUSG00000025736.8|jumonji domain containing 8 	ENSMUST00000123582.1|Jmjd8|ENSMUSG00000025736.8|jumonji domain containing 8
mm10_v2_chr11_-_3193388_3193463	0.0633092	Rfx3_Rfx1_Rfx4	ENSMUST00000081318.6|Sfi1|ENSMUSG00000023764.12|Sfi1 homolog, spindle assembly associated (yeast) 	ENSMUST00000142315.1|Sfi1|ENSMUSG00000023764.12|Sfi1 homolog, spindle assembly associated (yeast) 	ENSMUST00000118627.1|Sfi1|ENSMUSG00000023764.12|Sfi1 homolog, spindle assembly associated (yeast) 	ENSMUST00000066391.7|Sfi1|ENSMUSG00000023764.12|Sfi1 homolog, spindle assembly associated (yeast)
mm10_v2_chrX_+_7884321_7884378	0.0631601	Rfx3_Rfx1_Rfx4	ENSMUST00000096514.3|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2 	ENSMUST00000123277.1|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr1_+_164275559_164275660	0.0624999	Rfx3_Rfx1_Rfx4	ENSMUST00000027867.6|Ccdc181|ENSMUSG00000026578.6|coiled-coil domain containing 181
mm10_v2_chr2_+_129129700_129129791	0.0620352	Rfx3_Rfx1_Rfx4	ENSMUST00000035481.4|Chchd5|ENSMUSG00000037938.4|coiled-coil-helix-coiled-coil-helix domain containing 5
mm10_v2_chr11_+_88047693_88047727	0.0612881	Rfx3_Rfx1_Rfx4	ENSMUST00000079866.4|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr9_-_59486610_59486621	0.0609836	Rfx3_Rfx1_Rfx4	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr1_+_139454747_139454825	0.0577056	Rfx3_Rfx1_Rfx4	ENSMUST00000053364.8|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila) 	ENSMUST00000097554.3|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila)
mm10_v2_chr13_+_24802020_24802020	0.0571888	Rfx3_Rfx1_Rfx4	ENSMUST00000155575.1|BC005537|ENSMUSG00000019132.4|cDNA sequence BC005537
mm10_v2_chr7_+_16816299_16816361	0.0551303	Rfx3_Rfx1_Rfx4	ENSMUST00000108495.2|Strn4|ENSMUSG00000030374.9|striatin, calmodulin binding protein 4
mm10_v2_chrX_-_157568983_157568991	0.0533628	Rfx3_Rfx1_Rfx4	ENSMUST00000065806.4|Yy2|ENSMUSG00000091736.2|Yy2 transcription factor
mm10_v2_chr15_-_88978958_88979007	0.0520415	Rfx3_Rfx1_Rfx4	ENSMUST00000042594.6|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) 	ENSMUST00000109368.1|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm10_v2_chr12_+_72441933_72441970	0.0489619	Rfx3_Rfx1_Rfx4	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr13_+_96542602_96542626	0.0483848	Rfx3_Rfx1_Rfx4	ENSMUST00000179226.1|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr9_+_104569671_104569683	0.0437988	Rfx3_Rfx1_Rfx4	ENSMUST00000057742.8|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chr18_+_36348653_36348728	0.0435955	Rfx3_Rfx1_Rfx4	ENSMUST00000050584.3|Cystm1|ENSMUSG00000046727.6|cysteine-rich transmembrane module containing 1
mm10_v2_chr4_-_12087912_12088011	0.0422177	Rfx3_Rfx1_Rfx4	ENSMUST00000050686.3|Tmem67|ENSMUSG00000049488.8|transmembrane protein 67
mm10_v2_chr7_-_126583177_126583255	0.0407157	Rfx3_Rfx1_Rfx4	ENSMUST00000098036.2|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) 	ENSMUST00000032962.4|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm10_v2_chr8_-_105827190_105827350	0.0398552	Rfx3_Rfx1_Rfx4	ENSMUST00000041400.5|Ranbp10|ENSMUSG00000037415.5|RAN binding protein 10
mm10_v2_chr6_-_102464667_102464667	0.0391659	Rfx3_Rfx1_Rfx4	ENSMUST00000032159.6|Cntn3|ENSMUSG00000030075.8|contactin 3
mm10_v2_chr1_+_75236439_75236469	0.0390589	Rfx3_Rfx1_Rfx4	ENSMUST00000082158.6|Dnajb2|ENSMUSG00000026203.10|DnaJ (Hsp40) homolog, subfamily B, member 2 	ENSMUST00000055223.7|Dnajb2|ENSMUSG00000026203.10|DnaJ (Hsp40) homolog, subfamily B, member 2
mm10_v2_chr9_-_50617428_50617467	0.0388624	Rfx3_Rfx1_Rfx4	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr4_-_149774238_149774279	0.0387844	Rfx3_Rfx1_Rfx4	ENSMUST00000105686.2|Slc25a33|ENSMUSG00000028982.9|solute carrier family 25, member 33
mm10_v2_chr3_+_122245557_122245578	0.0374965	Rfx3_Rfx1_Rfx4	ENSMUST00000029769.7|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr2_+_91922178_91922194	0.036649	Rfx3_Rfx1_Rfx4	ENSMUST00000170432.1|Chrm4|ENSMUSG00000040495.3|cholinergic receptor, muscarinic 4
mm10_v2_chr5_-_112228900_112228929	0.0349828	Rfx3_Rfx1_Rfx4	ENSMUST00000182509.1|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding)
mm10_v2_chr2_+_85050439_85050500	0.0345992	Rfx3_Rfx1_Rfx4	ENSMUST00000111605.2|Tnks1bp1|ENSMUSG00000033955.6|tankyrase 1 binding protein 1
mm10_v2_chr6_+_48593927_48593952	0.0338136	Rfx3_Rfx1_Rfx4	ENSMUST00000135151.1|Repin1|ENSMUSG00000052751.10|replication initiator 1
mm10_v2_chr4_-_141664063_141664170	0.0323011	Rfx3_Rfx1_Rfx4	ENSMUST00000084203.4|Plekhm2|ENSMUSG00000028917.8|pleckstrin homology domain containing, family M (with RUN domain) member 2
mm10_v2_chr15_-_75841907_75841932	0.0313081	Rfx3_Rfx1_Rfx4	ENSMUST00000100538.2|Zc3h3|ENSMUSG00000075600.2|zinc finger CCCH type containing 3
mm10_v2_chr13_-_119755882_119755882	0.0312032	Rfx3_Rfx1_Rfx4	ENSMUST00000178142.1|Nim1|ENSMUSG00000095930.1|serine/threonine-protein kinase NIM1
mm10_v2_chr10_-_128547722_128547774	0.0303415	Rfx3_Rfx1_Rfx4	ENSMUST00000040572.3|Zc3h10|ENSMUSG00000039810.5|zinc finger CCCH type containing 10
mm10_v2_chr14_+_31641051_31641082	0.025781	Rfx3_Rfx1_Rfx4	ENSMUST00000090147.6|Btd|ENSMUSG00000021900.10|biotinidase
mm10_v2_chr7_-_44375006_44375035	0.0243422	Rfx3_Rfx1_Rfx4	ENSMUST00000107933.1|1700008O03Rik|ENSMUSG00000008028.9|RIKEN cDNA 1700008O03 gene
mm10_v2_chr14_-_26066961_26066961	0.0219632	Rfx3_Rfx1_Rfx4	ENSMUST00000100818.5|Tmem254c|ENSMUSG00000072680.5|transmembrane protein 254c
mm10_v2_chr1_-_128592284_128592307	0.0219387	Rfx3_Rfx1_Rfx4	ENSMUST00000052172.6|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4 	ENSMUST00000142893.1|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4
mm10_v2_chr8_-_94434259_94434297	0.0173255	Rfx3_Rfx1_Rfx4	ENSMUST00000180445.1|9330175E14Rik|ENSMUSG00000097194.1|RIKEN cDNA 9330175E14 gene
mm10_v2_chr16_-_64771146_64771184	0.0171618	Rfx3_Rfx1_Rfx4	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr14_+_58893465_58893506	0.0170434	Rfx3_Rfx1_Rfx4	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr14_-_41006882_41006976	0.0158911	Rfx3_Rfx1_Rfx4	ENSMUST00000152837.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A 	ENSMUST00000134715.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chr2_-_38287174_38287195	0.0136775	Rfx3_Rfx1_Rfx4	ENSMUST00000130472.1|Dennd1a|ENSMUSG00000035392.11|DENN/MADD domain containing 1A
mm10_v2_chr17_-_56609689_56609771	0.0124178	Rfx3_Rfx1_Rfx4	ENSMUST00000052832.5|2410015M20Rik|ENSMUSG00000049760.5|RIKEN cDNA 2410015M20 gene
mm10_v2_chr14_-_32085595_32085639	0.012151	Rfx3_Rfx1_Rfx4	ENSMUST00000022461.4|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3 	ENSMUST00000067955.5|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3 	ENSMUST00000124303.1|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3 	ENSMUST00000112000.1|Dph3|ENSMUSG00000021905.7|diphthamine biosynthesis 3
mm10_v2_chr16_-_96192222_96192262	0.0113183	Rfx3_Rfx1_Rfx4	ENSMUST00000113804.1|Lca5l|ENSMUSG00000045275.9|Leber congenital amaurosis 5-like 	ENSMUST00000054855.7|Lca5l|ENSMUSG00000045275.9|Leber congenital amaurosis 5-like
mm10_v2_chr17_-_36951338_36951425	0.00887891	Rfx3_Rfx1_Rfx4	ENSMUST00000173540.1|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm10_v2_chr7_+_30563838_30563879	0.00819004	Rfx3_Rfx1_Rfx4	ENSMUST00000163330.1|U2af1l4|ENSMUSG00000078765.4|U2 small nuclear RNA auxiliary factor 1-like 4
mm10_v2_chr9_+_104569754_104569793	0.00787255	Rfx3_Rfx1_Rfx4	ENSMUST00000077190.6|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chr7_+_130774069_130774185	0.0074767	Rfx3_Rfx1_Rfx4	ENSMUST00000048453.5|Btbd16|ENSMUSG00000040298.5|BTB (POZ) domain containing 16
mm10_v2_chr6_-_83156393_83156400	0.00734362	Rfx3_Rfx1_Rfx4	ENSMUST00000153148.1|Wdr54|ENSMUSG00000030032.6|WD repeat domain 54 	ENSMUST00000125894.1|Wdr54|ENSMUSG00000030032.6|WD repeat domain 54
mm10_v2_chr2_+_32757234_32757319	0.00690743	Rfx3_Rfx1_Rfx4	ENSMUST00000009707.7|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000177382.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000140999.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A
mm10_v2_chr16_-_36874806_36874862	0.00678407	Rfx3_Rfx1_Rfx4	ENSMUST00000075946.5|Eaf2|ENSMUSG00000022838.7|ELL associated factor 2
mm10_v2_chr4_+_6365650_6365720	0.00525742	Rfx3_Rfx1_Rfx4	ENSMUST00000029912.4|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000103008.5|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000175769.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000108374.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000140830.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein
mm10_v2_chr19_+_10577439_10577461	0.00356806	Rfx3_Rfx1_Rfx4	ENSMUST00000168445.1|Cyb561a3|ENSMUSG00000034445.7|cytochrome b561 family, member A3
mm10_v2_chr16_+_44394771_44394804	0.000711661	Rfx3_Rfx1_Rfx4	ENSMUST00000099742.2|Wdr52|ENSMUSG00000071550.7|WD repeat domain 52
mm10_v2_chrX_+_7884022_7884055	0.000514851	Rfx3_Rfx1_Rfx4	ENSMUST00000115660.4|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
