mm10_v2_chr14_-_20181773_20181790	1.87056	Runx3	ENSMUST00000024011.8|Kcnk5|ENSMUSG00000023243.8|potassium channel, subfamily K, member 5
mm10_v2_chr3_-_154330543_154330576	1.53447	Runx3	ENSMUST00000184966.1|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8 	ENSMUST00000177846.2|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8
mm10_v2_chr13_-_22041352_22041363	1.0449	Runx3	ENSMUST00000102977.2|Hist1h4i|ENSMUSG00000060639.4|histone cluster 1, H4i
mm10_v2_chr13_-_23551648_23551672	0.791183	Runx3	ENSMUST00000102971.1|Hist1h4f|ENSMUSG00000069274.3|histone cluster 1, H4f
mm10_v2_chr2_-_71546745_71546758	0.731933	Runx3	ENSMUST00000024159.6|Dlx2|ENSMUSG00000023391.7|distal-less homeobox 2
mm10_v2_chrX_+_99136119_99136138	0.695926	Runx3	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr7_+_141216626_141216700	0.694038	Runx3	ENSMUST00000141804.1|Rassf7|ENSMUSG00000038618.5|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 	ENSMUST00000148975.1|Rassf7|ENSMUSG00000038618.5|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
mm10_v2_chr7_-_78783026_78783066	0.648949	Runx3	ENSMUST00000032841.5|Mrpl46|ENSMUSG00000030612.5|mitochondrial ribosomal protein L46
mm10_v2_chr11_-_89302545_89302567	0.642557	Runx3	ENSMUST00000061728.3|Nog|ENSMUSG00000048616.3|noggin
mm10_v2_chr13_-_23698454_23698460	0.571489	Runx3	ENSMUST00000102967.1|Hist1h4c|ENSMUSG00000060678.4|histone cluster 1, H4c
mm10_v2_chr17_+_27556668_27556690	0.538824	Runx3	ENSMUST00000117254.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1 	ENSMUST00000118570.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1
mm10_v2_chr17_+_27556641_27556658	0.536385	Runx3	ENSMUST00000119486.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1 	ENSMUST00000118599.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1
mm10_v2_chr13_+_21735055_21735070	0.525606	Runx3	ENSMUST00000087714.4|Hist1h4j|ENSMUSG00000067455.4|histone cluster 1, H4j
mm10_v2_chr17_+_27556613_27556635	0.515188	Runx3	ENSMUST00000117600.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1 	ENSMUST00000114888.3|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1
mm10_v2_chr11_-_5878207_5878292	0.511544	Runx3	ENSMUST00000102922.3|Pold2|ENSMUSG00000020471.5|polymerase (DNA directed), delta 2, regulatory subunit
mm10_v2_chr18_-_47368446_47368486	0.485196	Runx3	ENSMUST00000076043.6|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000135790.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr17_+_30005029_30005098	0.478394	Runx3	ENSMUST00000057897.7|Zfand3|ENSMUSG00000044477.10|zinc finger, AN1-type domain 3
mm10_v2_chr6_-_100671126_100671178	0.471353	Runx3	ENSMUST00000089245.6|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000113312.2|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000170667.1|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae)
mm10_v2_chr13_-_21832194_21832198	0.469562	Runx3	ENSMUST00000102979.1|Hist1h4n|ENSMUSG00000069305.3|histone cluster 1, H4n
mm10_v2_chr13_+_51645232_51645276	0.458779	Runx3	ENSMUST00000075853.5|Cks2|ENSMUSG00000062248.5|CDC28 protein kinase regulatory subunit 2
mm10_v2_chr15_+_40655020_40655054	0.430366	Runx3	ENSMUST00000053467.4|Zfpm2|ENSMUSG00000022306.8|zinc finger protein, multitype 2
mm10_v2_chr7_+_28808795_28808832	0.370556	Runx3	ENSMUST00000172529.1|Hnrnpl|ENSMUSG00000015165.10|heterogeneous nuclear ribonucleoprotein L
mm10_v2_chr4_-_120570252_120570299	0.365583	Runx3	ENSMUST00000030381.7|Ctps|ENSMUSG00000028633.7|cytidine 5'-triphosphate synthase
mm10_v2_chr10_+_128083273_128083309	0.336129	Runx3	ENSMUST00000026459.5|Atp5b|ENSMUSG00000025393.6|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm10_v2_chr2_+_72476225_72476259	0.314225	Runx3	ENSMUST00000157019.1|Cdca7|ENSMUSG00000055612.9|cell division cycle associated 7
mm10_v2_chr7_+_78783119_78783119	0.313479	Runx3	ENSMUST00000032840.4|Mrps11|ENSMUSG00000030611.4|mitochondrial ribosomal protein S11
mm10_v2_chr9_-_20898592_20898631	0.304459	Runx3	ENSMUST00000004206.8|Eif3g|ENSMUSG00000070319.5|eukaryotic translation initiation factor 3, subunit G
mm10_v2_chr18_-_77713978_77714010	0.30207	Runx3	ENSMUST00000074653.4|8030462N17Rik|ENSMUSG00000047466.9|RIKEN cDNA 8030462N17 gene
mm10_v2_chr9_+_106429537_106429548	0.28049	Runx3	ENSMUST00000059802.6|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chr2_+_72476159_72476212	0.265873	Runx3	ENSMUST00000102691.4|Cdca7|ENSMUSG00000055612.9|cell division cycle associated 7
mm10_v2_chr9_-_78481724_78481751	0.26002	Runx3	ENSMUST00000042235.8|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr14_-_72709534_72709549	0.258089	Runx3	ENSMUST00000162478.1|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr11_+_75679259_75679327	0.255503	Runx3	ENSMUST00000017920.7|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108426.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108425.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000093115.3|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm10_v2_chr9_+_70012540_70012595	0.254519	Runx3	ENSMUST00000118198.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119905.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119413.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000140305.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000122087.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2
mm10_v2_chr13_-_115101909_115101984	0.245445	Runx3	ENSMUST00000061673.7|Itga1|ENSMUSG00000042284.9|integrin alpha 1
mm10_v2_chr10_-_62602261_62602298	0.235444	Runx3	ENSMUST00000045866.7|Ddx21|ENSMUSG00000020075.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
mm10_v2_chr9_+_106429399_106429457	0.230537	Runx3	ENSMUST00000150576.1|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chr17_+_28328471_28328570	0.225831	Runx3	ENSMUST00000042334.8|Rpl10a|ENSMUSG00000037805.8|ribosomal protein L10A
mm10_v2_chr9_-_108094459_108094487	0.223288	Runx3	ENSMUST00000081309.7|Apeh|ENSMUSG00000032590.9|acylpeptide hydrolase
mm10_v2_chr13_+_37826225_37826315	0.216587	Runx3	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr13_-_35906324_35906364	0.208034	Runx3	ENSMUST00000174230.1|Rpp40|ENSMUSG00000021418.9|ribonuclease P 40 subunit 	ENSMUST00000171686.2|Rpp40|ENSMUSG00000021418.9|ribonuclease P 40 subunit
mm10_v2_chr2_-_50296680_50296801	0.202011	Runx3	ENSMUST00000144143.1|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 	ENSMUST00000102769.4|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 	ENSMUST00000133768.1|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
mm10_v2_chr5_+_45493374_45493437	0.198121	Runx3	ENSMUST00000046122.6|Lap3|ENSMUSG00000039682.6|leucine aminopeptidase 3
mm10_v2_chr3_+_122245625_122245722	0.191963	Runx3	ENSMUST00000178826.1|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr16_+_92301266_92301323	0.18981	Runx3	ENSMUST00000063641.4|Smim11|ENSMUSG00000051989.5|small integral membrane protein 11 	ENSMUST00000118064.1|Smim11|ENSMUSG00000051989.5|small integral membrane protein 11
mm10_v2_chr7_-_16816731_16816744	0.181458	Runx3	ENSMUST00000061390.7|Fkrp|ENSMUSG00000048920.7|fukutin related protein
mm10_v2_chr11_-_84916338_84916371	0.177479	Runx3	ENSMUST00000103195.4|Znhit3|ENSMUSG00000020526.6|zinc finger, HIT type 3
mm10_v2_chr14_-_72709986_72710027	0.167037	Runx3	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr15_-_72546279_72546279	0.156261	Runx3	ENSMUST00000044624.6|Kcnk9|ENSMUSG00000036760.6|potassium channel, subfamily K, member 9
mm10_v2_chr11_-_5762358_5762404	0.154002	Runx3	ENSMUST00000120306.1|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation 	ENSMUST00000170116.1|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation 	ENSMUST00000053427.4|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation 	ENSMUST00000118076.1|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation
mm10_v2_chr17_+_35879770_35879824	0.151872	Runx3	ENSMUST00000025292.8|Dhx16|ENSMUSG00000024422.8|DEAH (Asp-Glu-Ala-His) box polypeptide 16
mm10_v2_chr18_-_34651703_34651741	0.140843	Runx3	ENSMUST00000025228.5|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23 	ENSMUST00000133181.1|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23
mm10_v2_chr11_-_23665862_23665959	0.134466	Runx3	ENSMUST00000020523.3|Pex13|ENSMUSG00000020283.5|peroxisomal biogenesis factor 13
mm10_v2_chr2_+_145785980_145786152	0.13207	Runx3	ENSMUST00000110005.1|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2 	ENSMUST00000094480.4|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2
mm10_v2_chr5_-_25223153_25223153	0.126856	Runx3	ENSMUST00000066954.1|E130116L18Rik|ENSMUSG00000054116.1|RIKEN cDNA E130116L18 gene
mm10_v2_chr2_+_155517948_155518107	0.118313	Runx3	ENSMUST00000029135.8|Acss2|ENSMUSG00000027605.12|acyl-CoA synthetase short-chain family member 2 	ENSMUST00000065973.2|Acss2|ENSMUSG00000027605.12|acyl-CoA synthetase short-chain family member 2 	ENSMUST00000103142.5|Acss2|ENSMUSG00000027605.12|acyl-CoA synthetase short-chain family member 2
mm10_v2_chr11_-_70220969_70221027	0.113932	Runx3	ENSMUST00000060010.2|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chrX_-_73458990_73459044	0.112911	Runx3	ENSMUST00000033737.8|Haus7|ENSMUSG00000031371.8|HAUS augmin-like complex, subunit 7 	ENSMUST00000077243.4|Haus7|ENSMUSG00000031371.8|HAUS augmin-like complex, subunit 7
mm10_v2_chr13_-_25020289_25020379	0.111988	Runx3	ENSMUST00000021772.2|Mrs2|ENSMUSG00000021339.3|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)
mm10_v2_chr6_-_99632376_99632376	0.108137	Runx3	ENSMUST00000176255.1|Gm20696|ENSMUSG00000030068.3|predicted gene 20696
mm10_v2_chr3_+_95658771_95658857	0.101812	Runx3	ENSMUST00000178686.1|Mcl1|ENSMUSG00000038612.10|myeloid cell leukemia sequence 1
mm10_v2_chr4_-_116627478_116627503	0.0882461	Runx3	ENSMUST00000081182.4|Nasp|ENSMUSG00000028693.9|nuclear autoantigenic sperm protein (histone-binding) 	ENSMUST00000030457.5|Nasp|ENSMUSG00000028693.9|nuclear autoantigenic sperm protein (histone-binding)
mm10_v2_chr7_-_35802968_35803007	0.0867544	Runx3	ENSMUST00000061586.4|Zfp507|ENSMUSG00000044452.4|zinc finger protein 507
mm10_v2_chr13_-_14063395_14063436	0.0862027	Runx3	ENSMUST00000170957.1|Ggps1|ENSMUSG00000021302.9|geranylgeranyl diphosphate synthase 1
mm10_v2_chr11_-_70410010_70410042	0.0809821	Runx3	ENSMUST00000019065.3|Pelp1|ENSMUSG00000018921.5|proline, glutamic acid and leucine rich protein 1 	ENSMUST00000135148.1|Pelp1|ENSMUSG00000018921.5|proline, glutamic acid and leucine rich protein 1
mm10_v2_chr7_+_3617357_3617389	0.0792257	Runx3	ENSMUST00000076657.4|Ndufa3|ENSMUSG00000035674.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 	ENSMUST00000108644.1|Ndufa3|ENSMUSG00000035674.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3
mm10_v2_chr3_+_95658714_95658723	0.0758073	Runx3	ENSMUST00000037947.8|Mcl1|ENSMUSG00000038612.10|myeloid cell leukemia sequence 1
mm10_v2_chr8_+_27023793_27023810	0.0433633	Runx3	ENSMUST00000033873.7|Erlin2|ENSMUSG00000031483.7|ER lipid raft associated 2
mm10_v2_chr11_-_70220794_70220832	0.0432052	Runx3	ENSMUST00000159867.1|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chr11_-_70220776_70220790	0.0388557	Runx3	ENSMUST00000141290.1|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chr8_+_71908595_71908657	0.0380534	Runx3	ENSMUST00000110002.1|Zfp882|ENSMUSG00000089857.3|zinc finger protein 882 	ENSMUST00000131544.1|Zfp617|ENSMUSG00000066880.9|zinc finger protein 617 	ENSMUST00000125802.1|Zfp882|ENSMUSG00000089857.3|zinc finger protein 882
mm10_v2_chr1_+_159232299_159232326	0.0351318	Runx3	ENSMUST00000076894.5|Rfwd2|ENSMUSG00000040782.7|ring finger and WD repeat domain 2
mm10_v2_chr7_+_35802593_35802593	0.0347293	Runx3	ENSMUST00000052454.2|E130304I02Rik|ENSMUSG00000044997.2|RIKEN cDNA E130304I02 gene
mm10_v2_chr4_-_133672601_133672652	0.0250616	Runx3	ENSMUST00000062118.4|Pigv|ENSMUSG00000043257.9|phosphatidylinositol glycan anchor biosynthesis, class V 	ENSMUST00000067902.6|Pigv|ENSMUSG00000043257.9|phosphatidylinositol glycan anchor biosynthesis, class V
mm10_v2_chr5_+_121397936_121398004	0.0155161	Runx3	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr8_+_4243264_4243387	0.0115171	Runx3	ENSMUST00000110996.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
