mm10_v2_chr6_-_115251839_115251867	2.94145	Zic4	ENSMUST00000032462.6|Timp4|ENSMUSG00000030317.6|tissue inhibitor of metalloproteinase 4
mm10_v2_chr11_-_102946688_102946725	2.85887	Zic4	ENSMUST00000057849.5|C1ql1|ENSMUSG00000045532.5|complement component 1, q subcomponent-like 1
mm10_v2_chr12_-_56535047_56535106	2.83474	Zic4	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr6_+_141524379_141524449	2.77549	Zic4	ENSMUST00000032362.9|Slco1c1|ENSMUSG00000030235.11|solute carrier organic anion transporter family, member 1c1
mm10_v2_chr1_+_91179822_91179822	2.6948	Zic4	ENSMUST00000097648.4|Ramp1|ENSMUSG00000034353.8|receptor (calcitonin) activity modifying protein 1 	ENSMUST00000165855.1|Ramp1|ENSMUSG00000034353.8|receptor (calcitonin) activity modifying protein 1
mm10_v2_chr17_-_71310952_71310969	2.40331	Zic4	ENSMUST00000024849.9|Emilin2|ENSMUSG00000024053.10|elastin microfibril interfacer 2
mm10_v2_chr19_-_57008187_57008228	2.28489	Zic4	ENSMUST00000118800.1|Afap1l2|ENSMUSG00000025083.11|actin filament associated protein 1-like 2 	ENSMUST00000111584.2|Afap1l2|ENSMUSG00000025083.11|actin filament associated protein 1-like 2 	ENSMUST00000122359.1|Afap1l2|ENSMUSG00000025083.11|actin filament associated protein 1-like 2 	ENSMUST00000148049.1|Afap1l2|ENSMUSG00000025083.11|actin filament associated protein 1-like 2
mm10_v2_chr11_+_5861886_5861966	2.16283	Zic4	ENSMUST00000102923.3|Aebp1|ENSMUSG00000020473.7|AE binding protein 1
mm10_v2_chr2_+_147187424_147187424	2.00777	Zic4	ENSMUST00000144411.1|6430503K07Rik|ENSMUSG00000053545.6|RIKEN cDNA 6430503K07 gene
mm10_v2_chr17_+_79051906_79051906	1.92103	Zic4	ENSMUST00000040789.4|Qpct|ENSMUSG00000024084.7|glutaminyl-peptide cyclotransferase (glutaminyl cyclase)
mm10_v2_chr3_-_107986408_107986466	1.77014	Zic4	ENSMUST00000012348.2|Gstm2|ENSMUSG00000040562.6|glutathione S-transferase, mu 2
mm10_v2_chr3_-_107986360_107986399	1.74625	Zic4	ENSMUST00000066530.6|Gstm2|ENSMUSG00000040562.6|glutathione S-transferase, mu 2
mm10_v2_chr2_+_85136355_85136371	1.69357	Zic4	ENSMUST00000057019.7|Aplnr|ENSMUSG00000044338.8|apelin receptor
mm10_v2_chr4_-_64046925_64047015	1.69193	Zic4	ENSMUST00000107377.3|Tnc|ENSMUSG00000028364.9|tenascin C
mm10_v2_chrX_-_49797700_49797755	1.67512	Zic4	ENSMUST00000033442.7|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1 	ENSMUST00000114891.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chr13_-_95223045_95223080	1.5963	Zic4	ENSMUST00000162292.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B
mm10_v2_chr11_-_6475992_6476102	1.5954	Zic4	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr18_-_80713062_80713080	1.55773	Zic4	ENSMUST00000170905.1|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 	ENSMUST00000078049.4|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
mm10_v2_chr11_+_121702591_121702763	1.52501	Zic4	ENSMUST00000125580.1|Metrnl|ENSMUSG00000039208.9|meteorin, glial cell differentiation regulator-like
mm10_v2_chr4_-_57143437_57143624	1.51031	Zic4	ENSMUST00000095076.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b 	ENSMUST00000030142.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b
mm10_v2_chr2_+_32535315_32535359	1.49464	Zic4	ENSMUST00000133512.1|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A 	ENSMUST00000048375.5|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A
mm10_v2_chr2_-_152951547_152951608	1.43196	Zic4	ENSMUST00000037715.6|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr2_-_152951456_152951540	1.3608	Zic4	ENSMUST00000123121.2|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr2_-_152951688_152951700	1.32618	Zic4	ENSMUST00000109811.3|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr2_+_32535724_32535739	1.32541	Zic4	ENSMUST00000133366.1|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A
mm10_v2_chr19_+_48206025_48206163	1.2727	Zic4	ENSMUST00000078880.5|Sorcs3|ENSMUSG00000063434.5|sortilin-related VPS10 domain containing receptor 3
mm10_v2_chr14_+_25980039_25980039	1.26248	Zic4	ENSMUST00000173155.1|Duxbl1|ENSMUSG00000048502.8|double homeobox B-like 1
mm10_v2_chr14_+_26119811_26119811	1.24671	Zic4	ENSMUST00000173617.1|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr7_+_139834148_139834174	1.20328	Zic4	ENSMUST00000026548.7|Gpr123|ENSMUSG00000025475.11|G protein-coupled receptor 123
mm10_v2_chr11_+_61956779_61956791	1.18859	Zic4	ENSMUST00000049836.7|Specc1|ENSMUSG00000042331.7|sperm antigen with calponin homology and coiled-coil domains 1
mm10_v2_chr14_+_26259109_26259109	1.16569	Zic4	ENSMUST00000174494.1|Duxbl3|ENSMUSG00000072672.4|double homeobox B-like 3
mm10_v2_chr19_+_4855129_4855269	1.16307	Zic4	ENSMUST00000119694.1|Ctsf|ENSMUSG00000083282.2|cathepsin F
mm10_v2_chr2_+_180598219_180598226	1.14057	Zic4	ENSMUST00000103059.1|Col9a3|ENSMUSG00000027570.9|collagen, type IX, alpha 3
mm10_v2_chr7_-_16476765_16476792	1.05543	Zic4	ENSMUST00000002053.8|Npas1|ENSMUSG00000001988.8|neuronal PAS domain protein 1
mm10_v2_chr18_+_58836721_58836764	1.04601	Zic4	ENSMUST00000052907.5|Adamts19|ENSMUSG00000053441.4|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19
mm10_v2_chr6_-_35308110_35308136	1.03174	Zic4	ENSMUST00000031868.4|Slc13a4|ENSMUSG00000029843.4|solute carrier family 13 (sodium/sulfate symporters), member 4
mm10_v2_chr4_+_117096049_117096083	1.02584	Zic4	ENSMUST00000030443.5|Ptch2|ENSMUSG00000028681.5|patched homolog 2
mm10_v2_chr19_+_4099998_4100083	1.00412	Zic4	ENSMUST00000049658.7|Pitpnm1|ENSMUSG00000024851.7|phosphatidylinositol transfer protein, membrane-associated 1
mm10_v2_chr3_+_107595031_107595164	0.999587	Zic4	ENSMUST00000014747.1|Alx3|ENSMUSG00000014603.1|aristaless-like homeobox 3
mm10_v2_chr15_+_7129557_7129573	0.974907	Zic4	ENSMUST00000067190.5|Lifr|ENSMUSG00000054263.5|leukemia inhibitory factor receptor 	ENSMUST00000164529.1|Lifr|ENSMUSG00000054263.5|leukemia inhibitory factor receptor
mm10_v2_chrX_-_107403295_107403404	0.934955	Zic4	ENSMUST00000033591.5|Itm2a|ENSMUSG00000031239.5|integral membrane protein 2A
mm10_v2_chr5_-_24527276_24527276	0.922815	Zic4	ENSMUST00000088311.4|Gbx1|ENSMUSG00000067724.4|gastrulation brain homeobox 1
mm10_v2_chr3_-_95015416_95015462	0.916575	Zic4	ENSMUST00000132195.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687
mm10_v2_chr6_+_65671590_65671618	0.909329	Zic4	ENSMUST00000054351.4|Ndnf|ENSMUSG00000049001.4|neuron-derived neurotrophic factor
mm10_v2_chr4_-_11386757_11386783	0.905454	Zic4	ENSMUST00000108313.1|Esrp1|ENSMUSG00000040728.9|epithelial splicing regulatory protein 1 	ENSMUST00000108311.2|Esrp1|ENSMUSG00000040728.9|epithelial splicing regulatory protein 1
mm10_v2_chr19_-_12501996_12502152	0.875979	Zic4	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chr17_-_85688252_85688275	0.83988	Zic4	ENSMUST00000024947.7|Six2|ENSMUSG00000024134.10|sine oculis-related homeobox 2 	ENSMUST00000163568.2|Six2|ENSMUSG00000024134.10|sine oculis-related homeobox 2
mm10_v2_chr14_-_52316323_52316344	0.802583	Zic4	ENSMUST00000135523.1|Sall2|ENSMUSG00000049532.7|sal-like 2 (Drosophila)
mm10_v2_chr3_-_95015214_95015246	0.800737	Zic4	ENSMUST00000128438.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687 	ENSMUST00000149747.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687 	ENSMUST00000019482.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687
mm10_v2_chr8_-_64693027_64693040	0.798153	Zic4	ENSMUST00000048967.7|Cpe|ENSMUSG00000037852.7|carboxypeptidase E
mm10_v2_chr9_+_46012810_46012821	0.793946	Zic4	ENSMUST00000126865.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr11_-_59290746_59290758	0.79221	Zic4	ENSMUST00000010044.7|Wnt3a|ENSMUSG00000009900.7|wingless-related MMTV integration site 3A
mm10_v2_chr16_+_16213318_16213364	0.781219	Zic4	ENSMUST00000162150.1|Pkp2|ENSMUSG00000041957.9|plakophilin 2 	ENSMUST00000161342.1|Pkp2|ENSMUSG00000041957.9|plakophilin 2 	ENSMUST00000039408.2|Pkp2|ENSMUSG00000041957.9|plakophilin 2
mm10_v2_chr2_+_119325784_119325817	0.776982	Zic4	ENSMUST00000102517.3|Dll4|ENSMUSG00000027314.6|delta-like 4 (Drosophila)
mm10_v2_chr8_-_45382198_45382291	0.749733	Zic4	ENSMUST00000093526.6|Fam149a|ENSMUSG00000070044.9|family with sequence similarity 149, member A
mm10_v2_chr9_+_46012822_46013000	0.735048	Zic4	ENSMUST00000120463.2|Sik3|ENSMUSG00000034135.8|SIK family kinase 3 	ENSMUST00000120247.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr6_-_39118211_39118349	0.729353	Zic4	ENSMUST00000038398.6|Parp12|ENSMUSG00000038507.6|poly (ADP-ribose) polymerase family, member 12
mm10_v2_chr3_-_110142996_110143010	0.729297	Zic4	ENSMUST00000156177.2|Ntng1|ENSMUSG00000059857.9|netrin G1
mm10_v2_chr3_+_59006978_59006978	0.710378	Zic4	ENSMUST00000040325.7|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000164225.1|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000040846.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000029393.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm10_v2_chr3_+_61002786_61002811	0.683904	Zic4	ENSMUST00000029331.1|P2ry1|ENSMUSG00000027765.1|purinergic receptor P2Y, G-protein coupled 1
mm10_v2_chr2_+_120977017_120977107	0.682137	Zic4	ENSMUST00000067582.7|Tmem62|ENSMUSG00000054484.8|transmembrane protein 62
mm10_v2_chr11_-_116335384_116335399	0.670732	Zic4	ENSMUST00000036215.7|Foxj1|ENSMUSG00000034227.7|forkhead box J1
mm10_v2_chr12_+_24651346_24651409	0.665047	Zic4	ENSMUST00000020982.5|Klf11|ENSMUSG00000020653.5|Kruppel-like factor 11
mm10_v2_chr4_-_56865135_56865208	0.639371	Zic4	ENSMUST00000107612.2|Ctnnal1|ENSMUSG00000038816.8|catenin (cadherin associated protein), alpha-like 1 	ENSMUST00000045142.8|Ctnnal1|ENSMUSG00000038816.8|catenin (cadherin associated protein), alpha-like 1
mm10_v2_chr5_-_125341043_125341112	0.637993	Zic4	ENSMUST00000111390.1|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1 	ENSMUST00000086075.6|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1
mm10_v2_chr2_+_91922178_91922194	0.635482	Zic4	ENSMUST00000170432.1|Chrm4|ENSMUSG00000040495.3|cholinergic receptor, muscarinic 4
mm10_v2_chr17_-_34031684_34031699	0.632723	Zic4	ENSMUST00000169397.1|Slc39a7|ENSMUSG00000024327.9|solute carrier family 39 (zinc transporter), member 7
mm10_v2_chr7_+_27591705_27591778	0.630104	Zic4	ENSMUST00000167435.1|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr11_-_69920892_69920966	0.624006	Zic4	ENSMUST00000152589.1|Eif5a|ENSMUSG00000078812.4|eukaryotic translation initiation factor 5A 	ENSMUST00000108612.1|Eif5a|ENSMUSG00000078812.4|eukaryotic translation initiation factor 5A 	ENSMUST00000108611.1|Eif5a|ENSMUSG00000078812.4|eukaryotic translation initiation factor 5A
mm10_v2_chr8_-_111393810_111393834	0.620566	Zic4	ENSMUST00000038475.8|Fa2h|ENSMUSG00000033579.10|fatty acid 2-hydroxylase
mm10_v2_chr17_-_34031644_34031667	0.599269	Zic4	ENSMUST00000171872.1|Slc39a7|ENSMUSG00000024327.9|solute carrier family 39 (zinc transporter), member 7
mm10_v2_chr16_+_35983424_35983582	0.589009	Zic4	ENSMUST00000173555.1|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr7_+_98703091_98703137	0.577336	Zic4	ENSMUST00000033009.9|Prkrir|ENSMUSG00000030753.9|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
mm10_v2_chr4_-_133602168_133602168	0.574393	Zic4	ENSMUST00000057311.3|Sfn|ENSMUSG00000047281.3|stratifin
mm10_v2_chr9_+_62838767_62838816	0.529884	Zic4	ENSMUST00000034776.6|Cln6|ENSMUSG00000032245.6|ceroid-lipofuscinosis, neuronal 6
mm10_v2_chr9_-_29412204_29412277	0.52382	Zic4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr17_-_51179249_51179349	0.49207	Zic4	ENSMUST00000024717.8|Tbc1d5|ENSMUSG00000023923.9|TBC1 domain family, member 5
mm10_v2_chr4_+_128883549_128883611	0.472947	Zic4	ENSMUST00000035667.8|Trim62|ENSMUSG00000041000.8|tripartite motif-containing 62
mm10_v2_chr17_-_57059795_57059863	0.472606	Zic4	ENSMUST00000040280.7|Slc25a23|ENSMUSG00000046329.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm10_v2_chr4_-_151996113_151996258	0.465389	Zic4	ENSMUST00000055688.9|Phf13|ENSMUSG00000047777.9|PHD finger protein 13
mm10_v2_chr5_-_113310729_113310788	0.443603	Zic4	ENSMUST00000112325.1|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1 	ENSMUST00000048112.6|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1
mm10_v2_chr4_-_156197479_156197496	0.439824	Zic4	ENSMUST00000075787.6|Agrn|ENSMUSG00000041936.12|agrin 	ENSMUST00000180572.1|Agrn|ENSMUSG00000041936.12|agrin
mm10_v2_chr7_+_27591513_27591562	0.435767	Zic4	ENSMUST00000108344.2|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr17_-_34031544_34031634	0.433596	Zic4	ENSMUST00000025186.8|Slc39a7|ENSMUSG00000024327.9|solute carrier family 39 (zinc transporter), member 7
mm10_v2_chr4_+_148130883_148130915	0.413006	Zic4	ENSMUST00000084129.2|Mad2l2|ENSMUSG00000029003.5|MAD2 mitotic arrest deficient-like 2
mm10_v2_chr3_-_8964037_8964101	0.408988	Zic4	ENSMUST00000091354.5|Tpd52|ENSMUSG00000027506.9|tumor protein D52 	ENSMUST00000094381.4|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr2_-_181288016_181288041	0.405933	Zic4	ENSMUST00000049032.6|Gmeb2|ENSMUSG00000038705.7|glucocorticoid modulatory element binding protein 2
mm10_v2_chr10_+_127739516_127739592	0.394308	Zic4	ENSMUST00000054287.7|Zbtb39|ENSMUSG00000044617.7|zinc finger and BTB domain containing 39
mm10_v2_chr12_-_67222549_67222578	0.386752	Zic4	ENSMUST00000037181.8|Mdga2|ENSMUSG00000034912.10|MAM domain containing glycosylphosphatidylinositol anchor 2
mm10_v2_chr10_+_45335751_45335789	0.382339	Zic4	ENSMUST00000095715.3|Bves|ENSMUSG00000071317.3|blood vessel epicardial substance
mm10_v2_chr13_-_95891905_95891929	0.370089	Zic4	ENSMUST00000068603.6|Iqgap2|ENSMUSG00000021676.9|IQ motif containing GTPase activating protein 2
mm10_v2_chr9_-_63146980_63147011	0.366985	Zic4	ENSMUST00000055281.7|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1 	ENSMUST00000119146.1|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1
mm10_v2_chr7_+_28766747_28766822	0.362122	Zic4	ENSMUST00000170068.1|Sirt2|ENSMUSG00000015149.7|sirtuin 2 	ENSMUST00000072965.4|Sirt2|ENSMUSG00000015149.7|sirtuin 2
mm10_v2_chr19_+_47178820_47178997	0.352173	Zic4	ENSMUST00000111808.3|Neurl1a|ENSMUSG00000006435.9|neuralized homolog 1A (Drosophila)
mm10_v2_chr2_+_164879358_164879398	0.352072	Zic4	ENSMUST00000041643.3|Pcif1|ENSMUSG00000039849.5|PDX1 C-terminal inhibiting factor 1
mm10_v2_chr16_+_20733104_20733158	0.34882	Zic4	ENSMUST00000115423.1|Chrd|ENSMUSG00000006958.7|chordin 	ENSMUST00000007171.6|Chrd|ENSMUSG00000006958.7|chordin
mm10_v2_chr1_-_43163891_43163962	0.344781	Zic4	ENSMUST00000008280.7|Fhl2|ENSMUSG00000008136.8|four and a half LIM domains 2
mm10_v2_chr10_-_117845935_117845949	0.344335	Zic4	ENSMUST00000064667.7|Rap1b|ENSMUSG00000052681.7|RAS related protein 1b
mm10_v2_chr4_-_24851079_24851124	0.342278	Zic4	ENSMUST00000084781.5|Klhl32|ENSMUSG00000040387.10|kelch-like 32 	ENSMUST00000108218.3|Klhl32|ENSMUSG00000040387.10|kelch-like 32
mm10_v2_chr6_+_29433248_29433276	0.319403	Zic4	ENSMUST00000101617.2|Flnc|ENSMUSG00000068699.6|filamin C, gamma 	ENSMUST00000065090.5|Flnc|ENSMUSG00000068699.6|filamin C, gamma
mm10_v2_chr8_-_116732991_116733076	0.319231	Zic4	ENSMUST00000109102.2|Cdyl2|ENSMUSG00000031758.9|chromodomain protein, Y chromosome-like 2
mm10_v2_chr5_-_113310697_113310727	0.315832	Zic4	ENSMUST00000154248.1|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1
mm10_v2_chr2_-_71367749_71367797	0.315498	Zic4	ENSMUST00000151937.1|Slc25a12|ENSMUSG00000027010.10|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm10_v2_chr4_+_130792513_130792667	0.305712	Zic4	ENSMUST00000070478.3|Sdc3|ENSMUSG00000025743.8|syndecan 3
mm10_v2_chrX_+_42149534_42149683	0.305601	Zic4	ENSMUST00000127618.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr19_-_4477447_4477592	0.305283	Zic4	ENSMUST00000059295.3|Syt12|ENSMUSG00000049303.4|synaptotagmin XII
mm10_v2_chr12_+_102128718_102128739	0.3049	Zic4	ENSMUST00000159329.1|Slc24a4|ENSMUSG00000041771.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm10_v2_chr6_-_83054415_83054571	0.302	Zic4	ENSMUST00000113962.1|Htra2|ENSMUSG00000068329.6|HtrA serine peptidase 2 	ENSMUST00000089645.6|Htra2|ENSMUSG00000068329.6|HtrA serine peptidase 2 	ENSMUST00000113963.1|Htra2|ENSMUSG00000068329.6|HtrA serine peptidase 2
mm10_v2_chr1_+_153665666_153665709	0.301393	Zic4	ENSMUST00000111814.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8 	ENSMUST00000111810.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr13_-_37994111_37994190	0.299651	Zic4	ENSMUST00000021864.6|Ssr1|ENSMUSG00000021427.9|signal sequence receptor, alpha
mm10_v2_chr16_+_14361552_14361601	0.293694	Zic4	ENSMUST00000100167.3|Abcc1|ENSMUSG00000023088.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENSMUST00000154748.1|Abcc1|ENSMUSG00000023088.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENSMUST00000134776.1|Abcc1|ENSMUSG00000023088.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
mm10_v2_chr11_+_93996082_93996103	0.283479	Zic4	ENSMUST00000041956.7|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr1_+_153665627_153665657	0.279635	Zic4	ENSMUST00000147482.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr7_-_100932140_100932200	0.250243	Zic4	ENSMUST00000107032.1|Arhgef17|ENSMUSG00000032875.7|Rho guanine nucleotide exchange factor (GEF) 17
mm10_v2_chr5_+_43233463_43233491	0.250059	Zic4	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chr8_-_87959560_87959595	0.248246	Zic4	ENSMUST00000109655.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr8_-_36613937_36613948	0.244687	Zic4	ENSMUST00000033923.7|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr7_-_57387172_57387222	0.240608	Zic4	ENSMUST00000068911.6|Gabrg3|ENSMUSG00000055026.7|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
mm10_v2_chrX_+_159988433_159988433	0.235	Zic4	ENSMUST00000033665.8|Map3k15|ENSMUSG00000031303.8|mitogen-activated protein kinase kinase kinase 15
mm10_v2_chr6_+_97807014_97807067	0.231187	Zic4	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr16_+_84835070_84835124	0.226949	Zic4	ENSMUST00000009120.7|Gabpa|ENSMUSG00000008976.10|GA repeat binding protein, alpha
mm10_v2_chr2_+_131909928_131909948	0.222336	Zic4	ENSMUST00000091288.6|Prnp|ENSMUSG00000079037.3|prion protein
mm10_v2_chr17_-_29237759_29237827	0.217291	Zic4	ENSMUST00000137727.1|Cpne5|ENSMUSG00000024008.9|copine V 	ENSMUST00000024805.7|Cpne5|ENSMUSG00000024008.9|copine V
mm10_v2_chr13_-_48625571_48625594	0.214084	Zic4	ENSMUST00000035824.9|Ptpdc1|ENSMUSG00000038042.9|protein tyrosine phosphatase domain containing 1
mm10_v2_chr7_-_47133395_47133437	0.206657	Zic4	ENSMUST00000107617.1|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr4_+_62360695_62360758	0.205524	Zic4	ENSMUST00000084526.5|Slc31a1|ENSMUSG00000066150.6|solute carrier family 31, member 1
mm10_v2_chr7_+_45873127_45873187	0.203064	Zic4	ENSMUST00000107718.1|Kdelr1|ENSMUSG00000002778.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
mm10_v2_chr15_+_74563738_74563853	0.203063	Zic4	ENSMUST00000170845.1|Bai1|ENSMUSG00000034730.10|brain-specific angiogenesis inhibitor 1
mm10_v2_chr2_+_131909951_131909979	0.200435	Zic4	ENSMUST00000124100.1|PRND|ENSMUSG00000098754.1|prion protein gene complex (Prn), transcript variant 1, mRNA 	ENSMUST00000136783.1|PRND|ENSMUSG00000098754.1|prion protein gene complex (Prn), transcript variant 1, mRNA
mm10_v2_chr4_-_62360524_62360552	0.179909	Zic4	ENSMUST00000107461.1|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15 	ENSMUST00000084528.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15
mm10_v2_chr13_+_15463202_15463240	0.177726	Zic4	ENSMUST00000130065.1|Gli3|ENSMUSG00000021318.9|GLI-Kruppel family member GLI3
mm10_v2_chr11_-_101171302_101171353	0.176527	Zic4	ENSMUST00000164474.1|Plekhh3|ENSMUSG00000035172.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 	ENSMUST00000043397.7|Plekhh3|ENSMUSG00000035172.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm10_v2_chr11_+_75733037_75733148	0.173643	Zic4	ENSMUST00000131398.1|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr6_+_29433131_29433165	0.171762	Zic4	ENSMUST00000090474.4|Flnc|ENSMUSG00000068699.6|filamin C, gamma
mm10_v2_chr5_-_139325616_139325627	0.171045	Zic4	ENSMUST00000110865.1|Adap1|ENSMUSG00000056413.10|ArfGAP with dual PH domains 1
mm10_v2_chr11_-_89538556_89538556	0.170452	Zic4	ENSMUST00000169201.1|Ankfn1|ENSMUSG00000047773.6|ankyrin-repeat and fibronectin type III domain containing 1
mm10_v2_chr12_+_3807017_3807063	0.1629	Zic4	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr2_-_161109017_161109027	0.162695	Zic4	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr3_-_8667033_8667046	0.159909	Zic4	ENSMUST00000042412.3|Hey1|ENSMUSG00000040289.3|hairy/enhancer-of-split related with YRPW motif 1
mm10_v2_chr11_+_97663366_97663414	0.155013	Zic4	ENSMUST00000044730.5|Mllt6|ENSMUSG00000038437.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm10_v2_chr3_+_97658212_97658339	0.15185	Zic4	ENSMUST00000045743.6|Prkab2|ENSMUSG00000038205.6|protein kinase, AMP-activated, beta 2 non-catalytic subunit
mm10_v2_chr4_-_62360436_62360511	0.149998	Zic4	ENSMUST00000084527.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15 	ENSMUST00000098033.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15
mm10_v2_chr9_-_89622986_89622986	0.145639	Zic4	ENSMUST00000044491.6|AF529169|ENSMUSG00000039313.8|cDNA sequence AF529169
mm10_v2_chr1_+_153665274_153665325	0.142514	Zic4	ENSMUST00000152114.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8 	ENSMUST00000111812.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr4_+_109280365_109280412	0.13992	Zic4	ENSMUST00000177089.1|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15 	ENSMUST00000175776.1|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15 	ENSMUST00000132165.2|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr14_-_54913089_54913132	0.125763	Zic4	ENSMUST00000050772.7|Slc22a17|ENSMUSG00000022199.10|solute carrier family 22 (organic cation transporter), member 17
mm10_v2_chr8_+_87472838_87472849	0.11814	Zic4	ENSMUST00000180806.2|Gm2694|ENSMUSG00000097248.2|predicted gene 2694
mm10_v2_chr8_+_72240315_72240346	0.11776	Zic4	ENSMUST00000126885.1|Ap1m1|ENSMUSG00000003033.8|adaptor-related protein complex AP-1, mu subunit 1
mm10_v2_chr11_+_75732869_75732975	0.111665	Zic4	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr1_+_153665587_153665595	0.102723	Zic4	ENSMUST00000147700.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr7_+_45872772_45872857	0.101174	Zic4	ENSMUST00000002855.5|Kdelr1|ENSMUSG00000002778.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 	ENSMUST00000107719.1|Kdelr1|ENSMUSG00000002778.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
mm10_v2_chr10_-_62792243_62792368	0.100428	Zic4	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chr12_-_57546121_57546141	0.100327	Zic4	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr2_-_167062607_167062724	0.0985964	Zic4	ENSMUST00000128676.1|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr7_-_126503408_126503477	0.0921582	Zic4	ENSMUST00000040202.8|Atxn2l|ENSMUSG00000032637.9|ataxin 2-like
mm10_v2_chr8_+_87472805_87472822	0.0852307	Zic4	ENSMUST00000180700.2|Gm2694|ENSMUSG00000097248.2|predicted gene 2694 	ENSMUST00000182174.1|Gm2694|ENSMUSG00000097248.2|predicted gene 2694 	ENSMUST00000181159.1|Gm2694|ENSMUSG00000097248.2|predicted gene 2694
mm10_v2_chr18_-_24603464_24603530	0.078043	Zic4	ENSMUST00000154205.1|Slc39a6|ENSMUSG00000024270.5|solute carrier family 39 (metal ion transporter), member 6
mm10_v2_chr2_-_130642770_130642811	0.0748053	Zic4	ENSMUST00000045761.6|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3
mm10_v2_chr9_-_67539392_67539392	0.0685145	Zic4	ENSMUST00000039662.8|Tln2|ENSMUSG00000052698.8|talin 2
mm10_v2_chrX_-_104671048_104671071	0.0656033	Zic4	ENSMUST00000042070.5|Zdhhc15|ENSMUSG00000033906.5|zinc finger, DHHC domain containing 15
mm10_v2_chr13_+_34037619_34037655	0.0626039	Zic4	ENSMUST00000040656.6|Bphl|ENSMUSG00000038286.10|biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
mm10_v2_chr17_+_37045980_37046080	0.0594654	Zic4	ENSMUST00000174456.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr1_-_21961581_21961581	0.0593549	Zic4	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr1_+_10039762_10039792	0.0559922	Zic4	ENSMUST00000122156.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1 	ENSMUST00000118263.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1 	ENSMUST00000119714.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1
mm10_v2_chr15_-_75909319_75909355	0.0499955	Zic4	ENSMUST00000089680.3|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000141268.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000023235.6|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000109972.2|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000089681.5|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000109975.3|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000154584.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm10_v2_chr5_+_24426831_24426867	0.0499655	Zic4	ENSMUST00000155598.1|Slc4a2|ENSMUSG00000028962.8|solute carrier family 4 (anion exchanger), member 2
mm10_v2_chr15_-_36608959_36608983	0.0476253	Zic4	ENSMUST00000001809.8|Pabpc1|ENSMUSG00000022283.8|poly(A) binding protein, cytoplasmic 1
mm10_v2_chr2_-_167661496_167661591	0.044607	Zic4	ENSMUST00000125544.2|Gm20431|ENSMUSG00000089739.2|predicted gene 20431 	ENSMUST00000006587.6|Tmem189|ENSMUSG00000090213.1|transmembrane protein 189
mm10_v2_chr1_+_75546449_75546514	0.0430923	Zic4	ENSMUST00000150142.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr7_-_97579382_97579501	0.0405613	Zic4	ENSMUST00000151840.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000135998.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000144858.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000146605.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000072725.5|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000138060.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000154853.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000136757.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing 	ENSMUST00000124552.1|Aamdc|ENSMUSG00000035642.10|adipogenesis associated Mth938 domain containing
mm10_v2_chr11_-_70669283_70669416	0.0282776	Zic4	ENSMUST00000129434.1|Spag7|ENSMUSG00000018287.6|sperm associated antigen 7 	ENSMUST00000018431.6|Spag7|ENSMUSG00000018287.6|sperm associated antigen 7
mm10_v2_chr19_+_3767953_3768033	0.0250987	Zic4	ENSMUST00000113970.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr15_-_75909543_75909567	0.0248103	Zic4	ENSMUST00000123712.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000141475.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000144614.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm10_v2_chr16_-_30388530_30388530	0.0243827	Zic4	ENSMUST00000100013.2|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3 	ENSMUST00000061350.6|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3
mm10_v2_chr2_-_154569845_154569892	0.0221937	Zic4	ENSMUST00000103145.4|E2f1|ENSMUSG00000027490.11|E2F transcription factor 1
mm10_v2_chr18_+_34777008_34777075	0.0215959	Zic4	ENSMUST00000043775.7|Kdm3b|ENSMUSG00000038773.10|KDM3B lysine (K)-specific demethylase 3B
mm10_v2_chr17_-_26508463_26508519	0.0199789	Zic4	ENSMUST00000025025.6|Dusp1|ENSMUSG00000024190.6|dual specificity phosphatase 1
mm10_v2_chr11_+_77515104_77515128	0.0198046	Zic4	ENSMUST00000094004.4|Abhd15|ENSMUSG00000000686.11|abhydrolase domain containing 15
mm10_v2_chr7_+_45570342_45570373	0.00879363	Zic4	ENSMUST00000120864.1|Bcat2|ENSMUSG00000030826.11|branched chain aminotransferase 2, mitochondrial
mm10_v2_chr3_-_109027600_109027646	0.00636477	Zic4	ENSMUST00000171143.1|Fam102b|ENSMUSG00000040339.4|family with sequence similarity 102, member B
mm10_v2_chr3_-_20035285_20035325	0.00466068	Zic4	ENSMUST00000108321.1|Hps3|ENSMUSG00000027615.8|Hermansky-Pudlak syndrome 3 homolog (human) 	ENSMUST00000012580.6|Hps3|ENSMUSG00000027615.8|Hermansky-Pudlak syndrome 3 homolog (human)
mm10_v2_chr17_+_37045963_37045975	0.00316144	Zic4	ENSMUST00000025338.9|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr11_-_115536181_115536276	0.00254132	Zic4	ENSMUST00000118155.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast) 	ENSMUST00000153892.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast)
