ISMARA results: cebpa

Project

PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish

Navigation

Downloads

Results for cebpa

Z-value: 2.24

Motif logo

Transcription factors associated with cebpa

Gene Symbol	Gene ID	Gene Info
cebpa NCBI UniProt	ENSDARG00000036074	CCAAT enhancer binding protein alpha

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
cebpa	dr11_v1_chr7_-_38087865_38087865	0.19	6.5e-02	Click!

Activity profile of cebpa motif

Sorted Z-values of cebpa motif

Top targets:

Search:

Show entries

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr8_-_50147948 Show fit	65.68	ENSDART00000149010	hp NCBI UniProt Show fit	haptoglobin
chr22_-_26236188 Show fit	44.57	ENSDART00000162640 ENSDART00000167169 ENSDART00000138595	c3b.1 NCBI UniProt Show fit	complement component c3b, tandem duplicate 1
chr5_-_63509581 Show fit	43.76	ENSDART00000097325	c5 NCBI UniProt Show fit	complement component 5
chr1_+_59067978 Show fit	39.81	ENSDART00000172613	MFAP4 (1 of many) NCBI UniProt Show fit	si:ch1073-110a20.7
chr8_-_39739627 Show fit	37.27	ENSDART00000135422 ENSDART00000067844	si:ch211-170d8.5 NCBI UniProt Show fit	si:ch211-170d8.5
chr8_-_13972626 Show fit	36.30	ENSDART00000144296	serping1 NCBI UniProt Show fit	serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
chr15_+_28202170 Show fit	34.87	ENSDART00000077736	vtna NCBI UniProt Show fit	vitronectin a
chr14_+_21107032 Show fit	34.64	ENSDART00000138319 ENSDART00000139103 ENSDART00000184735	aldob NCBI UniProt Show fit	aldolase b, fructose-bisphosphate
chr1_+_10051763 Show fit	33.89	ENSDART00000011701	fgb NCBI UniProt Show fit	fibrinogen beta chain
chr9_-_32847642 Show fit	33.02	ENSDART00000121506	hpx NCBI UniProt Show fit	hemopexin

Showing 1 to 10 of 200 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of cebpa

View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
2.8	66.4	GO:0030388	fructose 1,6-bisphosphate metabolic process(GO:0030388)
4.6	63.9	GO:0072378	blood coagulation, fibrin clot formation(GO:0072378)
3.1	50.3	GO:0001867	complement activation, lectin pathway(GO:0001867)
0.1	43.9	GO:0006955	immune response(GO:0006955)
6.8	40.7	GO:0032367	intracellular cholesterol transport(GO:0032367)
12.1	36.3	GO:2000257	regulation of protein activation cascade(GO:2000257)
1.3	35.1	GO:0051180	vitamin transport(GO:0051180)
6.8	34.2	GO:0019483	beta-alanine metabolic process(GO:0019482) beta-alanine biosynthetic process(GO:0019483)
0.0	34.1	GO:0006508	proteolysis(GO:0006508)
0.4	31.2	GO:0072376	complement activation(GO:0006956) protein activation cascade(GO:0072376)

Showing 1 to 10 of 195 entries

Gene overrepresentation in cellular component category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	427.2	GO:0005615	extracellular space(GO:0005615)
0.2	125.8	GO:0005576	extracellular region(GO:0005576)
0.1	110.1	GO:0005739	mitochondrion(GO:0005739)
21.3	63.9	GO:0005577	fibrinogen complex(GO:0005577)
0.4	48.5	GO:0005777	peroxisome(GO:0005777) microbody(GO:0042579)
0.1	46.8	GO:0005815	microtubule organizing center(GO:0005815)
0.2	29.7	GO:0005759	mitochondrial matrix(GO:0005759)
2.3	22.5	GO:0034362	low-density lipoprotein particle(GO:0034362)
0.0	18.4	GO:0005829	cytosol(GO:0005829)
0.2	16.0	GO:0030027	lamellipodium(GO:0030027)

Showing 1 to 10 of 61 entries

Gene overrepresentation in molecular function category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
1.2	205.1	GO:0004866	endopeptidase inhibitor activity(GO:0004866)
8.3	66.4	GO:0004332	fructose-bisphosphate aldolase activity(GO:0004332)
0.3	64.6	GO:0004252	serine-type endopeptidase activity(GO:0004252)
0.5	42.0	GO:0008395	steroid hydroxylase activity(GO:0008395)
1.4	37.2	GO:0030247	pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.5	36.8	GO:0003823	antigen binding(GO:0003823)
1.6	33.1	GO:0070492	oligosaccharide binding(GO:0070492)
0.6	32.3	GO:0015020	glucuronosyltransferase activity(GO:0015020)
0.0	31.1	GO:0005102	receptor binding(GO:0005102)
10.3	30.8	GO:0005499	vitamin D binding(GO:0005499)

Showing 1 to 10 of 155 entries

Gene overrepresentation in curated gene sets: canonical pathways category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
4.8	81.7	PID INTEGRIN2 PATHWAY	Beta2 integrin cell surface interactions
1.8	80.2	PID HNF3B PATHWAY	FOXA2 and FOXA3 transcription factor networks
0.4	66.6	NABA ECM REGULATORS	Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.7	58.2	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.4	19.6	PID IL4 2PATHWAY	IL4-mediated signaling events
0.3	15.8	PID MYC ACTIV PATHWAY	Validated targets of C-MYC transcriptional activation
0.8	11.4	PID P38 MK2 PATHWAY	p38 signaling mediated by MAPKAP kinases
0.1	7.5	PID ERA GENOMIC PATHWAY	Validated nuclear estrogen receptor alpha network
0.3	6.2	PID TOLL ENDOGENOUS PATHWAY	Endogenous TLR signaling
0.0	5.2	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins

Showing 1 to 10 of 26 entries

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
3.2	66.4	REACTOME GLYCOLYSIS	Genes involved in Glycolysis
5.3	63.9	REACTOME COMMON PATHWAY	Genes involved in Common Pathway
4.2	54.2	REACTOME INTRINSIC PATHWAY	Genes involved in Intrinsic Pathway
1.9	50.3	REACTOME COMPLEMENT CASCADE	Genes involved in Complement cascade
0.6	34.2	REACTOME METABOLISM OF VITAMINS AND COFACTORS	Genes involved in Metabolism of vitamins and cofactors
1.1	29.7	REACTOME STEROID HORMONES	Genes involved in Steroid hormones
2.3	22.5	REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT	Genes involved in Chylomicron-mediated lipid transport
2.9	20.4	REACTOME PYRIMIDINE CATABOLISM	Genes involved in Pyrimidine catabolism
3.6	17.9	REACTOME PURINE CATABOLISM	Genes involved in Purine catabolism
0.3	14.8	REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX	Genes involved in Formation of the ternary complex, and subsequently, the 43S complex

Showing 1 to 10 of 61 entries

Results for cebpa

Z-value: 2.24

Motif logo

Transcription factors associated with cebpa

Activity-expression correlation:

Activity profile of cebpa motif

Sorted Z-values of cebpa motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of cebpa

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: